12 results on '"Kap-Sun Yeung"'
Search Results
2. Degradation of Protein Kinases: Ternary Complex, Cooperativity, and Selectivity
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Kap-Sun Yeung and Claire E Grigglestone
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Kinase ,Chemistry ,Organic Chemistry ,Drug Discovery ,Biophysics ,Degradation (geology) ,Cooperativity ,Protein degradation ,Selectivity ,Biochemistry ,Ternary complex - Abstract
[Image: see text] In targeted protein degradation of kinases, key discoveries have been made specifically involving selective kinase degradation. Structural and biophysical studies on the ternary complex formation have provided a clear understanding of the basis for achieving degradation selectivity which is important in guiding the design of efficient and selective protein degraders.
- Published
- 2021
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3. meta C–H Arylation of Electron-Rich Arenes: Reversing the Conventional Site Selectivity
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Jin-Quan Yu, Luo-Yan Liu, Jennifer X. Qiao, Kap-Sun Yeung, and William R. Ewing
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Ligand ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Combinatorial chemistry ,Article ,Catalysis ,0104 chemical sciences ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,chemistry ,Alkoxy group ,Electronic effect ,Chromane ,Reversing ,Selectivity ,Norbornene - Abstract
Controlling site selectivity of C–H activation without using a directing group remains a significant challenge. While Pd(II) catalysts modulated by a mutually repulsive pyridine-type ligand have been shown to favor the relatively electron-rich carbon centers of arenes, reversing the selectivity to favor palladation at the relatively electron-deficient positions has not been possible. Herein we report the first catalytic system that effectively performs meta C–H arylation of a variety of alkoxy aromatics including 2,3-dihydrobenzofuran and chromane with exclusive meta site selectivity, thus reversing the conventional site selectivity governed by native electronic effects. The identification of an effective ligand and modified norbornene (NBE-CO(2)Me), as well as taking advantage of the statistics, are essential for achieving the exclusive meta selectivity.
- Published
- 2019
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4. Improving Metabolic Stability with Deuterium: The Discovery of BMT-052, a Pan-genotypic HCV NS5B Polymerase Inhibitor
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Dawn D. Parker, Karen Rigat, Kyle J. Eastman, Umesh Hanumegowda, Katharine A. Grant-Young, Nicholas A. Meanwell, Maria Tuttle, Tao Wang, Tatyana Zvyaga, Susan B. Roberts, Hua Fang, Kap-Sun Yeung, Mengping Liu, Julie A. Lemm, Kathy Mosure, Xiaoliang Zhuo, Maria Donoso, Kyle Parcella, Zhongxing Zhang, Matthew G. Soars, Zuzana Haarhoff, Zhiwei Yin, Ying-Kai Wang, John F. Kadow, and Juliang Zhu
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0301 basic medicine ,010405 organic chemistry ,Hepatitis C virus ,Organic Chemistry ,Metabolic stability ,Biology ,medicine.disease_cause ,01 natural sciences ,Biochemistry ,Virology ,Ns5b polymerase ,0104 chemical sciences ,03 medical and health sciences ,030104 developmental biology ,Drug Discovery ,Genotype ,medicine ,Primer (molecular biology) - Abstract
Iterative structure–activity analyses in a class of highly functionalized furo[2,3-b]pyridines led to the identification of the second generation pan-genotypic hepatitis C virus NS5B polymerase primer grip inhibitor BMT-052 (14), a potential clinical candidate. The key challenge of poor metabolic stability was overcome by strategic incorporation of deuterium at potential metabolic soft spots. The preclinical profile and status of BMT-052 (14) is described.
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- 2017
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5. Discovery of a Hepatitis C Virus NS5B Replicase Palm Site Allosteric Inhibitor (BMS-929075) Advanced to Phase 1 Clinical Studies
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Katherine A. Grant-Young, Andrew Nickel, Rajesh Onkardas Bora, Prakash Anjanappa, Bender John A, Kevin Kish, Kap-Sun Yeung, Dawn D. Parker, Joseph Raybon, Mark R. Witmer, Karen Rigat, Matthew G. Soars, Steven Sheriff, Yue-Zhong Shu, Kenneth S. Santone, Prashantha Gunaga, Kyle Parcella, Nicholas A. Meanwell, Jay O. Knipe, Susan B. Roberts, Alicia Ng, Michael Sinz, Kathy Mosure, Ying-Kai Wang, Brett R. Beno, Mengping Liu, Elizabeth Colston, Dennis M. Grasela, John F. Kadow, Qi Gao, Min Gao, Umesh Hanumegowda, Roy Haskell, Julie A. Lemm, Xiaoliang Zhuo, Changhong Wan, and Kumaravel Selvakumar
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Male ,0301 basic medicine ,Hepatitis C virus ,Allosteric regulation ,RNA-dependent RNA polymerase ,Hepacivirus ,Viral Nonstructural Proteins ,medicine.disease_cause ,Antiviral Agents ,01 natural sciences ,Rats, Sprague-Dawley ,03 medical and health sciences ,chemistry.chemical_compound ,Dogs ,Allosteric Regulation ,Drug Discovery ,medicine ,Animals ,Humans ,Benzofuran ,NS5B ,Benzofurans ,Ligand efficiency ,010405 organic chemistry ,Chemistry ,Drug discovery ,Haplorhini ,Hepatitis C ,Rats ,0104 chemical sciences ,Molecular Docking Simulation ,030104 developmental biology ,Biochemistry ,Benzothiadiazine ,Molecular Medicine ,Allosteric Site - Abstract
The hepatitis C virus (HCV) NS5B replicase is a prime target for the development of direct-acting antiviral drugs for the treatment of chronic HCV infection. Inspired by the overlay of bound structures of three structurally distinct NS5B palm site allosteric inhibitors, the high-throughput screening hit anthranilic acid 4, the known benzofuran analogue 5, and the benzothiadiazine derivative 6, an optimization process utilizing the simple benzofuran template 7 as a starting point for a fragment growing approach was pursued. A delicate balance of molecular properties achieved via disciplined lipophilicity changes was essential to achieve both high affinity binding and a stringent targeted absorption, distribution, metabolism, and excretion profile. These efforts led to the discovery of BMS-929075 (37), which maintained ligand efficiency relative to early leads, demonstrated efficacy in a triple combination regimen in HCV replicon cells, and exhibited consistently high oral bioavailability and pharmacokinetic parameters across preclinical animal species. The human PK properties from the Phase I clinical studies of 37 were better than anticipated and suggest promising potential for QD administration.
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- 2017
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6. Diverse ortho-C(sp2)–H Functionalization of Benzaldehydes Using Transient Directing Groups
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Qun-Liang Zhang, Jin-Quan Yu, Kap-Sun Yeung, Fang-Lin Zhang, Xi-Hai Liu, Bing Sun, Hojoon Park, Jun-Hao Hu, Bao-Long Wang, and Yan Hu
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010405 organic chemistry ,Group strategy ,Imine ,Multiple applications ,Halogenation ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Combinatorial chemistry ,Catalyst poisoning ,Catalysis ,0104 chemical sciences ,Benzaldehyde ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,chemistry ,Organic chemistry ,Surface modification - Abstract
Pd-catalyzed C–H functionalizations promoted by transient directing groups remain largely limited to C–H arylation only. Herein, we report a diverse set of ortho-C(sp2)–H functionalizations of benzaldehyde substrates using the transient directing group strategy. Without installing any auxiliary directing group, Pd(II)-catalyzed C–H arylation, chlorination, bromination, and Ir(III)-catalyzed amidation, could be achieved on benzaldehyde substrates. The transient directing groups formed in situ via imine linkage can override other coordinating functional groups capable of directing C–H activation or catalyst poisoning, significantly expanding the scope for metal-catalyzed C–H functionalization of benzaldehydes. The utility of this approach is demonstrated through multiple applications, including late-stage diversification of a drug analogue.
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- 2017
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7. Ligand-Accelerated Non-Directed C–H Cyanation of Arenes
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Kap-Sun Yeung, Jin-Quan Yu, and Luo-Yan Liu
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2-Pyridone ,chemistry.chemical_compound ,Limiting reagent ,chemistry ,Ligand ,Molecule ,chemistry.chemical_element ,Cyanation ,Combinatorial chemistry ,Bond cleavage ,Palladium - Abstract
We herein report the first example of a 2-pyridone accelerated non-directed C−H cyanation with an arene as the limiting reagent. This protocol is compatible with a broad scope of arenes, including advanced intermediates, drug molecules, and natural products. A kinetic isotope experiment (kH/kD = 4.40) indicates that the C–H bond cleavage is the rate-limiting step. Also, the reaction is readily scalable, further showcasing the synthetic utility of this method.
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- 2018
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8. A Survey of the Role of Noncovalent Sulfur Interactions in Drug Design
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Kap-Sun Yeung, Nicholas A. Meanwell, Brett R. Beno, Lewis D. Pennington, and Michael D. Bartberger
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Models, Molecular ,Hydrogen bond ,Stereochemistry ,Intermolecular force ,Sulfur metabolism ,Proteins ,chemistry.chemical_element ,Hydrogen Bonding ,Sulfur ,chemistry.chemical_compound ,Atomic orbital ,chemistry ,Chemical physics ,Drug Design ,Intramolecular force ,Drug Discovery ,Humans ,Molecular Medicine ,Molecule ,Organic synthesis - Abstract
Electron deficient, bivalent sulfur atoms have two areas of positive electrostatic potential, a consequence of the low-lying σ* orbitals of the C-S bond that are available for interaction with electron donors including oxygen and nitrogen atoms and, possibly, π-systems. Intramolecular interactions are by far the most common manifestation of this effect, which offers a means of modulating the conformational preferences of a molecule. Although a well-documented phenomenon, a priori applications in drug design are relatively sparse and this interaction, which is often isosteric with an intramolecular hydrogen-bonding interaction, appears to be underappreciated by the medicinal chemistry community. In this Perspective, we discuss the theoretical basis for sulfur σ* orbital interactions and illustrate their importance in the context of drug design and organic synthesis. The role of sulfur interactions in protein structure and function is discussed and although relatively rare, intermolecular interactions between ligand C-S σ* orbitals and proteins are illustrated.
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- 2015
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9. Ligand-Enabled β-C–H Arylation of α-Amino Acids Using a Simple and Practical Auxiliary
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Jian He, Kap-Sun Yeung, Jin-Quan Yu, Claudio Mapelli, Zhong Jin, Michael A. Poss, Zhipeng Zhang, Suhua Li, Pankaj Jain, Toshihiko Shigenari, Michael M. Miller, Gang Chen, and Paul Michael Scola
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chemistry.chemical_classification ,Alanine ,Pyridines ,Stereochemistry ,Ligand ,Phenylalanine ,Carboxylic acid ,Bioactive molecules ,Carboxylic Acids ,Enantioselective synthesis ,Chemistry Techniques, Synthetic ,General Chemistry ,Oxazoline ,Ligands ,Biochemistry ,Article ,Catalysis ,Amino acid ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,chemistry ,Amino Acids ,Palladium ,Hydrogen - Abstract
Pd-catalyzed β-C-H functionalizations of carboxylic acid derivatives using an auxiliary as a directing group have been extensively explored in the past decade. In comparison to the most widely used auxiliaries in asymmetric synthesis, the simplicity and practicality of the auxiliaries developed for C-H activation remains to be improved. We previously developed a simple N-methoxyamide auxiliary to direct β-C-H activation, albeit this system was not compatible with carboxylic acids containing α-hydrogen atoms. Herein we report the development of a pyridine-type ligand that overcomes this limitation of the N-methoxyamide auxiliary, leading to a significant improvement of β-arylation of carboxylic acid derivatives, especially α-amino acids. The arylation using this practical auxiliary is applied to the gram-scale syntheses of unnatural amino acids, bioactive molecules, and chiral bis(oxazoline) ligands.
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- 2015
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10. Discovery and Preclinical Characterization of the Cyclopropylindolobenzazepine BMS-791325, A Potent Allosteric Inhibitor of the Hepatitis C Virus NS5B Polymerase
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Zhong Yang, Jay O. Knipe, Susan B. Roberts, Yong Tu, Paul E. Morin, Ying-Kai Wang, John Wan, Andrew Nickel, Katharine A. Grant-Young, Piyasena Hewawasam, Sam T. Chao, Xiaoliang Zhuo, Bergstrom Carl P, Brett R. Beno, Qi Gao, Dianlin Xie, Chong-Hwan Chang, Dawn D. Parker, Mian Gao, Alicia Regueiro-Ren, Mengping Liu, Umesh Hanumegowda, Richard J. Colonno, Kathy Mosure, Nicholas A. Meanwell, Min Ding, Lenore A. Pelosi, John F. Kadow, Xiaofan Zheng, Steven Sheriff, Voss Stacey A, Alicia Ng, Kenneth S. Santone, Mark R. Witmer, Jung-Hui Sun, Robert G. Gentles, Bender John A, Min Gao, Yi Wang, Jeff Tredup, Daniel M. Camac, Scott W. Martin, Thomas W. Hudyma, Julie A. Lemm, Kap-Sun Yeung, and Karen Rigat
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Models, Molecular ,Indoles ,Magnetic Resonance Spectroscopy ,Membrane permeability ,Hepatitis C virus ,Allosteric regulation ,Viral Nonstructural Proteins ,Pharmacology ,medicine.disease_cause ,Antiviral Agents ,Mass Spectrometry ,Structure-Activity Relationship ,chemistry.chemical_compound ,Transactivation ,Dogs ,Allosteric Regulation ,Drug Discovery ,medicine ,Animals ,Humans ,Structure–activity relationship ,Enzyme Inhibitors ,Beclabuvir ,Pregnane X receptor ,Drug discovery ,Benzazepines ,Rats ,Biochemistry ,chemistry ,Molecular Medicine - Abstract
Described herein are structure-activity relationship studies that resulted in the optimization of the activity of members of a class of cyclopropyl-fused indolobenzazepine HCV NS5B polymerase inhibitors. Subsequent iterations of analogue design and syntheses successfully addressed off-target activities, most notably human pregnane X receptor (hPXR) transactivation, and led to significant improvements in the physicochemical properties of lead compounds. Those analogues exhibiting improved solubility and membrane permeability were shown to have notably enhanced pharmacokinetic profiles. Additionally, a series of alkyl bridged piperazine carboxamides was identified as being of particular interest, and from which the compound BMS-791325 (2) was found to have distinguishing antiviral, safety, and pharmacokinetic properties that resulted in its selection for clinical evaluation.
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- 2014
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11. Advances in the Total Synthesis of Biologically Important Marine Macrolides
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Kap-Sun Yeung and Ian Paterson
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Protein Conformation ,Chemistry ,Stereochemistry ,Molecular Conformation ,Total synthesis ,Stereoisomerism ,General Medicine ,General Chemistry ,Combinatorial chemistry ,Molecular conformation ,Protein Structure, Tertiary ,Structure-Activity Relationship ,Protein structure ,Biochemistry ,Cyclization ,Animals ,Structure–activity relationship ,Marine Toxins ,Macrolides - Published
- 2005
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12. Total Synthesis of Swinholide A and Hemiswinholide A
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Richard A. Ward, Kap-Sun Yeung, Ian Paterson, J. D. Smith, and John G. Cumming
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Colloid and Surface Chemistry ,Chemistry ,Swinholide A ,Total synthesis ,General Chemistry ,Biochemistry ,Combinatorial chemistry ,Catalysis - Published
- 1994
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