34 results on '"S., Pillai"'
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2. Melon Breeding and Genetics: Developments in Food Quality & Safety
- Author
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Bhimanagouda S. Patil, Nitin Dhowlaghar, Jashbir Singh, Syamkumar S. Pillai, Yukihiro Nagashima, Seyednami Niyakan, Kai He, Jashbir Singh, Rita Metrani, Kevin M. Crosby, John Jifon, Guddadarangavvanahally Jayaprakasha, Bhimanagouda Patil, Xiaoning Qian, Hisashi Koiwa, Jashbir Singh, Rita Metrani, Bhimanagouda S. Pat, Bhimanagouda S. Patil, Nitin Dhowlaghar, Jashbir Singh, Syamkumar S. Pillai
- Published
- 2022
3. Controlling Amyloid Fibril Properties Via Ionic Liquids: The Representative Case of Ethylammonium Nitrate and Tetramethylguanidinium Acetate on the Amyloidogenesis of Lysozyme
- Author
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Visakh V. S. Pillai, Pallavi Kumari, Srikanth Kolagatla, Victoria Garcia Sakai, Svemir Rudić, Brian J. Rodriguez, Marina Rubini, Katarzyna M. Tych, Antonio Benedetto, and Chemical Biology 1
- Subjects
Quaternary Ammonium Compounds ,Amyloid ,Ionic Liquids ,Muramidase ,General Materials Science ,Acetates ,Physical and Theoretical Chemistry ,Antiviral Agents ,Guanidine - Abstract
Proteins aggregation into amyloid fibrils has been observed in several pathological conditions and exploited in nanotechnology. It is also key in several biochemical processes. In this work we show that ionic liquids (ILs) – a vast class of organic electrolytes – can finely tune amyloid properties, opening a new playground in basic science and applications. The representative case of ethyl-ammonium nitrate (EAN) and tetramethyl-guanidinium acetate (TMGA) ILs on lysozyme is considered. Firstly, atomic force microscopy has shown that the addition of EAN and TMGA leads to thicker and thinner amyloid fibrils of greater and lower electric potential, respectively, with diameters finely tuneable by IL-concentration. Optical tweezers and neutron scattering have shed a light on their mechanism of action. TMGA interacts with the protein hydration layer only, making the relaxation dynamics of these water molecules faster. EAN interacts directly with the protein instead, making it mechanically unstable and slowing down its relaxation dynamics.
- Published
- 2022
4. Preface
- Author
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Bhimanagouda S. Patil, Nitin Dhowlaghar, Jashbir Singh, and Syamkumar S. Pillai
- Published
- 2022
- Full Text
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5. Sorption of CO, CH4, and N2in Alkali Metal Ion Exchanged Zeolite-X: Grand Canonical Monte Carlo Simulation and Volumetric Measurements.
- Author
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Renjith S. Pillai, Govind Sethia, and Raksh V. Jasra
- Subjects
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METAL ion absorption & adsorption , *ZEOLITES , *ION exchange (Chemistry) , *CATIONS , *VOLUME (Cubic content) , *MONTE Carlo method , *SIMULATION methods & models , *CANONICAL correlation (Statistics) - Abstract
Sorption of CO, CH4, and N2in zeolite-X exchanged with different alkali metal ions was studied by volumetric measurements and Grand Canonical Monte Carlo simulation. CO and CH4sorption is observed to show higher sorption capacity than N2in all cation exchanged zeolite samples. The adsorption capacity of CO in alkali metal exchanged zeolites is observed to decrease on moving from LiX to CsX, whereas for the methane adsorption capacity varies in reverse order. The isosteric heat of sorption data show stronger interactions of CO and N2molecules with alkali metal ion exchanged zeolites. The isosteric heat of CH4show nearly same value (21â24 kJ/mol) for all alkali metal ion exchanged zeolites. Simulation of the CO and N2sorption in alkali metal zeolite -X clearly shows that the adsorbed CO and N2molecules are located in proximity to the extra-framework cations in the super cage. Simulated data of adsorption isotherms and heats of adsorption of CO, N2, and CH4in alkali metal ion exchanged zeolite-X agree reasonably well with the experimental results. [ABSTRACT FROM AUTHOR]
- Published
- 2010
- Full Text
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6. Computational Study for Water Sorption in AlPO4-5 and AlPO4-11 Molecular Sieves.
- Author
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Renjith S. Pillai and Raksh V. Jasra
- Subjects
- *
ADSORPTION (Chemistry) , *WATER , *MOLECULAR sieves , *PHOSPHATES , *HYDROGEN bonding , *MONTE Carlo method , *DENSITY functionals - Abstract
The unusual water adsorption behavior in aluminophosphate molecular sieves AlPO4-5 and AlPO4-11 was studied using canonical Monte Carlo and periodic density functional theory (DFT) calculation. The number of adsorbed water molecules per cavity ranging from 1 to 12 were located inside the molecular sieves by canonical Monte Carlo simulation methods using a “compass” forcefield. The DFT calculations were done for optimizing each structure with and without adsorbed water molecules employing generalized gradient approximation with the Perdew−Burke−Ernzerhof exchange-correction functional. Both classical and quantum mechanical calculations have exhibited hydrogen bonding between adsorbed water molecules inside the main 12-membered ring. The Al−O−P angles were observed to decrease after adsorbing water molecules in geometry optimized AlPO4-5 and AlPO4-11 molecular sieves. DFT calculations illustrate that the initial loading of water in the large cavity is due to the mild acidity in the framework but the isobaric increase in loading is due to the abundant hydrogen bonding between adsorbed water at higher water loading. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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7. Liquid Crystalline Phase Behavior of High Molecular Weight DNA: A Comparative Study of the Influence of Metal Ions of Different Size, Charge and Binding Mode.
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Neethu Sundaresan, Cherumuttathu H. Suresh, Thresia Thomas, T. J. Thomas, and C. K. S. Pillai
- Published
- 2008
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8. Sorption of N2, O2, and Ar in Mn(II)-Exchanged Zeolites A and X Using Volumetric Measurements and Grand Canonical Monte Carlo Simulation.
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Jince Sebastian, Renjith S. Pillai, Sunil A. Peter, and Raksh V. Jasra
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SURFACE chemistry , *ADSORPTION (Chemistry) , *PHOTOSYNTHETIC oxygen evolution , *MONTE Carlo method - Abstract
The adsorption of nitrogen, oxygen, and argon has been studied in Mn(II)-cation-exchanged zeolite A and X powders and pellets at 288.2 and 303 K. Experimentally measured adsorption isotherms are compared with theoretically calculated data using grand canonical Monte Carlo (GCMC) simulation. Nitrogen showed higher adsorption capacity and selectivity than oxygen and argon in these zeolite samples. Mn(II)-exchanged zeolite A (O2Ar1.2−1.4) and X (O2Ar1.4−1.8) showed small selectivity for oxygen over argon. In zeolite A, the adsorption capacity for nitrogen, oxygen, and argon increases with the increase in Mn(II) exchange levels. In the case of zeolite X, the adsorption capacity for nitrogen increases at lower adsorption pressures upon Mn(II) cation exchange, but at higher equilibrium pressures, the nitrogen adsorption capacity is slightly lower than that of NaX in the granular form. However, Mn(II)-exchanged zeolite X powder showed increased adsorption capacity for nitrogen, oxygen, and argon with increase in Mn(II) exchange levels, indicating that the binder in zeolite X affects the adsorption capacities of these gases. Isosteric heat of adsorption data showed stronger interactions of nitrogen molecules with Mn(II) cations in zeolite samples. These observations have been explained in terms of higher electrostatic interaction of nitrogen with extra-framework zeolite cations. The selectivity of oxygen over argon is explained in terms of its higher interaction with Mn-exchanged zeolites than argon molecules. This is reflected in isosteric heat data of oxygen in Mn(II)-exchanged zeolite A (15.1−15.4 kJ/mol for O2and 13.3−14.3 kJ/mol for Ar) and Mn X (15.8−17.2 kJ/mol for O2and 13.9−15.2 kJ/mol for Ar). Adsorption isotherms and heats of adsorption were also calculated using grand canonical Monte Carlo simulation algorithm. Simulation studies expectedly show the proximity of nitrogen molecules to the locations of extra-framework sodium and manganese cations. [ABSTRACT FROM AUTHOR]
- Published
- 2007
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9. Correlation of Sorption Behavior of Nitrogen, Oxygen, and Argon with Ca2Locations in Zeolite A: A Grand Canonical Monte Carlo Simulation Study.
- Author
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Renjith S. Pillai, Sunil A. Peter, and Raksh V. Jasra
- Subjects
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NITROGEN , *OXYGEN , *ARGON , *ZEOLITES - Abstract
The adsorption isotherms for nitrogen, oxygen, and argon in various NaCaA zeolite samples were calculated theoretically using the grand canonical Monte Carlo simulation method. The adsorption capacity, selectivity, and heat of adsorption of nitrogen increase with an increasing number of calcium cations in zeolite A. The heat of adsorption of nitrogen showed a sudden increase when the calcium ion exchange to zeolite A was around 60%. Adsorption isotherms, determined experimentally by the volumetric adsorption method, support theoretically predicted isotherms. These observations have been explained in terms of the interaction of the nitrogen molecule with Ca2ions and their locations in zeolite A. [ABSTRACT FROM AUTHOR]
- Published
- 2007
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10. Role of Mg2and Ca2in DNA Bending: Evidence from an ONIOM-Based QM-MM Study of a DNA Fragment.
- Author
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Neethu Sundaresan, C. K. S. Pillai, and Cherumuttathu H. Suresh
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DNA , *COMPLEMENTARY DNA , *NUCLEIC acids , *SUGARS - Abstract
The binding of hydrated Mg2and Ca2ions with a DNA fragment containing two phosphate groups, three sugar units, and a G·C base pair is modeled in the anion and dianion states using a three-layer ONIOM approach. A monodentate binding mode was the most stable structure observed for both the ions in the anion model. However, the interactions of Mg2and Ca2with the dianion model of the DNA fragment gave rise to a large structural deformation at the base pair region, leading to the formation of “ring” structures. In both anion and dianion models, Mg2-bound structures were considerably more stable than the corresponding Ca2-bound structures. This feature and the formation of ring structures in the dianion models strongly supported the higher coordination power of the Mg2toward DNA systems for its compaction. The charge of the DNA fragment appeared to be crucial in deciding the binding strength as well as the binding mechanism of the metal ions. To the best of our knowledge, this is the first theoretical investigation of the interaction of a comparatively larger DNA model system with the biologically important Mg2and Ca2ions. [ABSTRACT FROM AUTHOR]
- Published
- 2006
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11. A Strength—Morphology Study of Transparent Two-Phase Polymers
- Author
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R. G. Bauer and P. S. Pillai
- Subjects
chemistry.chemical_classification ,Materials science ,chemistry ,Chemical engineering ,Morphology study ,Phase (matter) ,Polymer - Published
- 1976
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12. Toughness and Brittleness of Plastics
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RUDOLPH D. DEANIN, ALDO M. CRUGNOLA, S. MATSUOKA, ROGER J. MORGAN, JAMES E. O'NEAL, J. H. MAGILL, M. KOJIMA, S. S. POLLACK, M. N. HALLER, S. S. STERNSTEIN, J. ROSENTHAL, M. J. DOYLE, J. G. WAGNER, A. CERS, C. Y. YUAN HSIAO, C. C. HSIAO, RICHARD E. ROBERTSON, A. F. YEE, W. V. OLSZEWSKI, S. MILLER, CHARLES L. BEATTY, WALTER J. STAUFFER, SHAUL M. AHARONI, E. SACHER, R. G. BAYER, P. A. ENGEL, J. A. MANSON, R. W. HERTZBERG, S. L. KIM, W. C. WU, L. H. SPERLING, C. B. BUCKNALL, C. J. PAGE, V. O. YOUNG, MARGARET E. ROYLANCE, DAVID K. ROYLANCE, JACQUES N. SULTAN, R. E. TOUHSAENT, D. A. THOMAS, R. J. ANGELO, R. M. IKEDA, M. L. WALLACH, R. R. DURST, R. M. GRIFFITH, A. J. URBANIC, W. J VAN ESSEN, P. J. FENELON, J. R. WILSON, KALIDAS R. PATEL, BERNARD BAUM, WILLIAM H. HOLLEY, HAROLD STISKIN, ROY A. WHITE, PAUL B. WILLIS, ANTHONY F. WILDE, R. G. BAUER, P. S. PILLAI, F. F. KOBLITZ, S. D. STEEN, P. R. KULP, R. C. GILL, J. F. GLENN, A. NOSHAY, M. MATZNER, B. P. BARTH, R. K. WALTON, R. P. KAMBOUR, D. FAULKNER, E. E. KAMPF, G. E. NIZNIK, A. R. SHULTZ, C. K. RIEW, E. H. ROWE, RUDOLPH D. DEANIN, ALDO M. CRUGNOLA, S. MATSUOKA, ROGER J. MORGAN, JAMES E. O'NEAL, J. H. MAGILL, M. KOJIMA, S. S. POLLACK, M. N. HALLER, S. S. STERNSTEIN, J. ROSENTHAL, M. J. DOYLE, J. G. WAGNER, A. CERS, C. Y. YUAN HSIAO, C. C. HSIAO, RICHARD E. ROBERTSON, A. F. YEE, W. V. OLSZEWSKI, S. MILLER, CHARLES L. BEATTY, WALTER J. STAUFFER, SHAUL M. AHARONI, E. SACHER, R. G. BAYER, P. A. ENGEL, J. A. MANSON, R. W. HERTZBERG, S. L. KIM, W. C. WU, L. H. SPERLING, C. B. BUCKNALL, C. J. PAGE, V. O. YOUNG, MARGARET E. ROYLANCE, DAVID K. ROYLANCE, JACQUES N. SULTAN, R. E. TOUHSAENT, D. A. THOMAS, R. J. ANGELO, R. M. IKEDA, M. L. WALLACH, R. R. DURST, R. M. GRIFFITH, A. J. URBANIC, W. J VAN ESSEN, P. J. FENELON, J. R. WILSON, KALIDAS R. PATEL, BERNARD BAUM, WILLIAM H. HOLLEY, HAROLD STISKIN, ROY A. WHITE, PAUL B. WILLIS, ANTHONY F. WILDE, R. G. BAUER, P. S. PILLAI, F. F. KOBLITZ, S. D. STEEN, P. R. KULP, R. C. GILL, J. F. GLENN, A. NOSHAY, M. MATZNER, B. P. BARTH, R. K. WALTON, R. P. KAMBOUR, D. FAULKNER, E. E. KAMPF, G. E. NIZNIK, A. R. SHULTZ, C. K. RIEW, and E. H. ROWE
- Subjects
- Plastics--Testing--Congresses
- Published
- 1976
13. Propyl-phthalimide Cyclotricatechylene-Based Chemosensor for Sulfosulfuron Detection: Hybrid Computational and Experimental Approach.
- Author
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Patel N, Modi K, Bhatt K, Parikh J, Desai A, Jain B, Parmar N, Patel CN, Liska A, Ludvik J, Pillai S, and Mohan B
- Abstract
The detection of trace amounts of sulfosulfuron, a pesticide of increasing importance, has become a pressing issue, prompting the development of effective chemosensors. In this study, we functionalized cyclotricatechylene (CTC) with propyl-phthalimide due to the presence of electronegative oxygen and nitrogen binding sites. Our optimized ligand displayed the highest docking score with sulfosulfuron, and experimental studies confirmed a significant fluorescence enhancement upon its interaction with sulfosulfuron. To gain a deeper understanding of the binding mechanism, we introduced density functional theory (DFT) studies. We carried out binding constant, Job's plot, and limit of detection (LOD) calculations to establish the effectiveness of our chemosensor as a selective detector for sulfosulfuron. These findings demonstrate the potential of our chemosensor for future applications in the field of pesticide detection., Competing Interests: The authors declare no competing financial interest., (© 2023 The Authors. Published by American Chemical Society.)
- Published
- 2023
- Full Text
- View/download PDF
14. Permanent, Antimicrobial Coating to Rapidly Kill and Prevent Transmission of Bacteria, Fungi, Influenza, and SARS-CoV-2.
- Author
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Ghosh S, Mukherjee R, Mahajan VS, Boucau J, Pillai S, and Haldar J
- Subjects
- Acrylates pharmacology, Anti-Bacterial Agents chemistry, Bacteria, Fungi, Humans, Nylons pharmacology, Polyethylenes pharmacology, Rubber, SARS-CoV-2, Anti-Infective Agents pharmacology, COVID-19 prevention & control, Disinfectants pharmacology, Influenza A Virus, H1N1 Subtype, Influenza, Human
- Abstract
Microbial adhesion and contamination on shared surfaces can lead to life-threatening infections with serious impacts on public health, economy, and clinical practices. The traditional use of chemical disinfectants for sanitization of surfaces, however, comes with its share of health risks, such as hazardous effects on the eyes, skin, and respiratory tract, carcinogenicity, as well as environmental toxicity. To address this, we have developed a nonleaching quaternary small molecule (QSM)-based sprayable coating which can be fabricated on a wide range of surfaces such as nylon, polyethylene, surgical mask, paper, acrylate, and rubber in a one-step, photocuring technique. This contact-active coating killed pathogenic bacteria and fungi including drug-resistant strains of Staphylococcus aureus and Candida albicans within 15-30 min of contact. QSM coatings withstood multiple washes, highlighting their durability. Interestingly, the coated surfaces exhibited rapid killing of pathogens, leading to the prevention of their transmission upon contact. The coating showed membrane disruption of bacterial cells in fluorescence and electron microscopic investigations. Along with bacteria and fungi, QSM-coated surfaces also showed the complete killing of high loads of influenza (H1N1) and SARS-CoV-2 viruses within 30 min of exposure. To our knowledge, this is the first report of a coating for multipurpose materials applied in high-touch public places, hospital equipment, and clinical consumables, rapidly killing drug-resistant bacteria, fungi, influenza virus, and SARS-CoV-2.
- Published
- 2022
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15. Dual Singlet Excited-State Quenching Mechanisms in an Artificial Caroteno-Phthalocyanine Light Harvesting Antenna.
- Author
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Ravensbergen J, Pillai S, Méndez-Hernández DD, Frese RN, van Grondelle R, Gust D, Moore TA, Moore AL, and Kennis JTM
- Abstract
Under excess illumination, photosystem II of plants dissipates excess energy through the quenching of chlorophyll fluorescence in the light harvesting antenna. Various models involving chlorophyll quenching by carotenoids have been proposed, including (i) direct energy transfer from chlorophyll to the low-lying optically forbidden carotenoid S
1 state, (ii) formation of a collective quenched chlorophyll-carotenoid S1 excitonic state, (iii) chlorophyll-carotenoid charge separation and recombination, and (iv) chlorophyll-chlorophyll charge separation and recombination. In previous work, the first three processes were mimicked in model systems: in a Zn-phthalocyanine-carotenoid dyad with an amide linker, direct energy transfer was observed by femtosecond transient absorption spectroscopy, whereas in a Zn-phthalocyanine-carotenoid dyad with an amine linker excitonic quenching was demonstrated. Here, we present a transient absorption spectroscopic study on a Zn-phthalocyanine-carotenoid dyad with a phenylene linker. We observe that two quenching phases of the phthalocyanine excited state exist at 77 and 213 ps in addition to an unquenched phase at 2.7 ns. Within our instrument response of ∼100 fs, carotenoid S1 features rise which point at an excitonic quenching mechanism. Strikingly, we observe an additional rise of carotenoid S1 features at 3.6 ps, which shows that a direct energy transfer mechanism in an inverted kinetics regime is also in effect. We assign the 77 ps decay component to excitonic quenching and the 3.6 ps/213 ps rise and decay components to direct energy transfer. Our results indicate that dual quenching mechanisms may be active in the same molecular system, in addition to an unquenched fraction. Computational chemistry results indicate the presence of multiple conformers where one of the dihedral angles of the phenylene linker assumes distinct values. We propose that the parallel quenching pathways and the unquenched fraction result from such conformational subpopulations. Our results suggest that it is possible to switch between different regimes of quenching and nonquenching through a conformational change on the same molecule, offering insights into potential mechanisms used in biological photosynthesis to adapt to light intensity changes on fast time scales., Competing Interests: The authors declare no competing financial interest., (© 2021 The Authors. Published by American Chemical Society.)- Published
- 2022
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16. Correction to "Direct Visualization of Crystalline Domains in Carboxylated Nanocellulose Fibers".
- Author
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Nabeela K, Thomas RT, Nair RV, Backer SN, Mohan K, Chandran PR, and Pillai S
- Abstract
[This corrects the article DOI: 10.1021/acsomega.0c00410.]., (© 2021 American Chemical Society.)
- Published
- 2021
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17. Direct Visualization of Crystalline Domains in Carboxylated Nanocellulose Fibers.
- Author
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Nabeela K, Thomas RT, Nair RV, Namboorimadathil Backer S, Mohan K, Chandran PR, and Pillai S
- Abstract
Direct visualization of soft organic molecules like cellulose is extremely challenging under a high-energy electron beam. Herein, we adopt two ionization damage extenuation strategies to visualize the lattice arrangements of the β-(1→4)-d-glucan chains in carboxylated nanocellulose fibers (C-NCFs) having cellulose II crystalline phase using high-resolution transmission electron microscopy. Direct imaging of individual nanocellulose fibrils with high-resolution and least damage under high-energy electron beam is achieved by employing reduced graphene oxide, a conducting material with high electron transmittance and Ag
+ ions, with high electron density, eliminating the use of sample-specific, toxic staining agents, or other advanced add-on techniques. Furthermore, the imaging of cellulose lattices in a C-NCF/TiO2 nanohybrid system is accomplished in the presence of Ag+ ions in a medium revealing the mode of association of C-NCFs in the system, which validates the feasibility of the presented strategy. The methods adopted here can provide further understanding of the fine structures of carboxylated nanocellulose fibrils for studying their structure-property relationship for various applications., Competing Interests: The authors declare no competing financial interest., (Copyright © 2020 American Chemical Society.)- Published
- 2020
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18. Nuclear Quantum Effects in Hydrophobic Nanoconfinement.
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Shrestha BR, Pillai S, Santana A, Donaldson SH Jr, Pascal TA, and Mishra H
- Abstract
Nuclear quantum effects (NQEs) in water arise due to delocalization, zero-point energy (ZPE), and quantum tunneling of protons. Whereas quantum tunneling is significant only at low temperatures, proton delocalization and ZPE influence the properties of water at normal temperature and pressure (NTP), giving rise to isotope effects. However, the consequences of NQEs for interfaces of water with hydrophobic media, such as perfluorocarbons, have remained largely unexplored. Here, we reveal the existence and signature of NQEs modulating hydrophobic surface forces at NTP. Our experiments demonstrate that the attractive hydrophobic forces between molecularly smooth and rigid perfluorinated surfaces in nanoconfinement are ≈10% higher in H
2 O than in D2 O, even though the contact angles of H2 O and D2 O on these surfaces are indistinguishable. Our molecular dynamics simulations show that the underlying cause of the difference includes the destabilizing effect of ZPE on the librational motions of interfacial H2 O, which experiences larger quantum effects than D2 O.- Published
- 2019
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19. Rapid, Acid-Free Synthesis of High-Quality Graphene Quantum Dots for Aggregation Induced Sensing of Metal Ions and Bioimaging.
- Author
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Nair RV, Thomas RT, Sankar V, Muhammad H, Dong M, and Pillai S
- Abstract
Graphene quantum dots (GQDs) are zero-dimensional materials that exhibit characteristics of both graphene and quantum dots. Herein, we report a rapid, relatively green, one-pot synthesis of size-tunable GQDs from graphene oxide (GO) by a sonochemical method with intermittent microwave heating, keeping the reaction temperature constant at 90 °C. The GQDs were synthesized by oxidative cutting of GO using KMnO
4 as an oxidizing agent within a short span of time (30 min) in an acid-free condition. The synthesized GQDs were of high quality and exhibited good quantum yield (23.8%), high product yield (>75%), and lower cytotoxicity (tested up to 1000 μg/mL). Furthermore, the as-synthesized GQDs were demonstrated as excellent fluorescent probes for bioimaging and label-free sensing of Fe(III) ions, with a detection limit as low as 10 × 10-6 M., Competing Interests: The authors declare no competing financial interest.- Published
- 2017
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20. Low-Temperature Solution Processed Random Silver Nanowire as a Promising Replacement for Indium Tin Oxide.
- Author
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Teymouri A, Pillai S, Ouyang Z, Hao X, Liu F, Yan C, and Green MA
- Abstract
A low-temperature solution-based process for depositing silver nanowire (AgNW) networks for use as transparent conductive top electrode is demonstrated. These AgNWs when applied to Cu
2 ZnSnS4 solar cells outperformed indium tin oxide as the top electrode. Thinner nanowires allow the use of lower temperatures during processing, while longer wires allow lowered sheet resistance for the same surface coverage of NWs, enhancing the transmittance/conductance trade-off. Conductive atomic force microscopy and percolation theory were used to study the quality of the NW network at the microscale. Our optimized network yielded a sheet resistance of 18 Ω/□ and ∼95% transmission across the entire wavelength range of interest for a deposition temperature as low as of 60 °C. Our results show that AgNWs can be used for low-temperature cell fabrication using cheap solution-based processes that could also be promising for other solar cells constrained to low processing temperatures such as organic and perovskite solar cells.- Published
- 2017
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21. TEMPO-Oxidized Nanocellulose Fiber-Directed Stable Aqueous Suspension of Plasmonic Flower-like Silver Nanoconstructs for Ultra-Trace Detection of Analytes.
- Author
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Nabeela K, Thomas RT, Nair JB, Maiti KK, Warrier KG, and Pillai S
- Subjects
- Cellulose, Cyclic N-Oxides, Oxidation-Reduction, Silver, Spectrum Analysis, Raman, Water, Nanostructures
- Abstract
The synthesis of shape-tuned silver (Ag) nanostructures with high plasmon characteristics has become of significant importance in in vitro diagnostic applications. Herein, we report a simple aqueous synthetic route using 2,2,6,6-tetramethylpiperidine-1-oxyl-oxidized nanocellulose fibers (T-NCFs) and trisodium citrate (TSC) that results in anisotropically grown flower-like Ag nanoconstructs (AgNFs). A detailed investigation of the concentration and sequence of the addition of reactants in the formation of these anisotropic Ag structures is presented. Our experimental results show that the mechanism underlying the formation of AgNFs is facilitated by the synergistic action of T-NCFs and TSC on the directional growth of Ag nuclei during the primary stage, which later develop into a flower-like structure by the ripening of larger particles consuming smaller Ag particles. As a result the final structure comprises flower-like morphology over which several smaller Ag particles (of size <10 nm) are adhered. The aqueous AgNF colloid exhibits high stability (ζ = -69.4 mV) and long shelf-life at neutral pH (>4 months) by the efficient capping action of T-NCFs. Further, an as-synthesized nanoconstructs shows excellent surface-enhanced Raman scattering activity, which enables ultrasensitive detection of p-aminothiophenol with a concentration down to 10 aM (10
-17 M) in a reproducible way. This biosupported synthesis of stable aqueous colloids of AgNF may find potential applications as a biomedical sensing platform for the trace level detection of analyte molecules.- Published
- 2016
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22. Ultrafast energy transfer and excited state coupling in an artificial photosynthetic antenna.
- Author
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Maiuri M, Snellenburg JJ, van Stokkum IH, Pillai S, Wongcarter K, Gust D, Moore TA, Moore AL, van Grondelle R, Cerullo G, and Polli D
- Abstract
We have studied the energy transfer dynamics in an artificial light-harvesting dyad composed of a phthalocyanine (Pc) covalently linked to a carotenoid (Car). The combination of high temporal resolution transient absorption spectroscopy with global and target analysis allowed us to quantify the efficiency of the energy transfer from the S2 excited state of the Car to the Pc at 37%, close to values observed in some natural light-harvesting complexes. In addition, following selective excitation of the Pc, we have identified the spectral signatures of the S1 excited state of the Car which appear within the ≈30 fs time resolution of our measurement. This strongly indicates excited state coupling between the S1 state of Car and the Qx state of Pc, with important implications for the regulation of photosynthetic activity.
- Published
- 2013
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23. LC-ESI-MS/MS analysis of testosterone at sub-picogram levels using a novel derivatization reagent.
- Author
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Star-Weinstock M, Williamson BL, Dey S, Pillai S, and Purkayastha S
- Subjects
- Adolescent, Adult, Analytic Sample Preparation Methods, Child, Drug Stability, Female, Humans, Indicators and Reagents chemistry, Male, Middle Aged, Testosterone blood, Young Adult, Amines chemistry, Chromatography, Liquid methods, Limit of Detection, Spectrometry, Mass, Electrospray Ionization methods, Tandem Mass Spectrometry methods, Testosterone analysis, Testosterone chemistry
- Abstract
Testosterone analysis by LC-MS/MS is becoming the analytical method of choice over immunoassays due to its specificity and accuracy. However, neutral steroid hormones possess poor ionization efficiency in MS/MS, resulting in insufficient sensitivity for analyzing samples with trace concentrations of the hormones. The method presented here utilizes a derivatization step involving a novel, permanently charged, quaternary aminooxy (QAO) reagent or MS-tag that reacts to the ketone functionality of testosterone and significantly enhances its ESI-MS/MS sensitivity. This derivatization method enabled quantitation of total testosterone in human serum (200 μL) with a lower limit of quantitation (LLOQ) of 1 pg/mL (3.47 pmol/L), total testosterone in dried blood spots (8-10 μL) with a LLOQ of 40 pg/mL, and free testosterone in serum ultrafiltrate (400 μL) with a LLOQ of 0.5 pg/mL. The linearity of each of the high sensitivity applications was maintained over a broad dynamic range of 1-5000 pg/mL for the serum samples and 40-10,000 pg/mL for the dried blood spots (DBS) with R(2) >0.998. The %CV at the LLOQ was <15 for all applications. The QAO derivatization and sample preparation workflows are quick, simple, and robust. Comparison of the derivatization method with an LC-ESI-MS/MS nonderivatization method yielded high correlation and agreement. The derivatization reagent is universal and reacts with other compounds containing ketone or aldehyde functionality.
- Published
- 2012
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24. Large-area protein patterns generated by ordered binary colloidal assemblies as templates.
- Author
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Singh G, Gohri V, Pillai S, Arpanaei A, Foss M, and Kingshott P
- Subjects
- Adsorption, Colloids chemistry, Macromolecular Substances chemistry, Materials Testing, Molecular Conformation, Particle Size, Surface Properties, Crystallization methods, Gold chemistry, Membranes, Artificial, Nanostructures chemistry, Nanostructures ultrastructure, Proteins chemistry
- Abstract
We demonstrate the use of binary colloidal assemblies as lithographic masks to generate tunable Au patterns on SiO(2) substrates with dimensions ranging from micrometers to nanometers. Such patterns can be modified with different chemistries to create patterns with well-defined sites for selective adsorption of proteins, where the pattern size and spacing is adjustable depending on particle choice. In our system, the binary colloidal assemblies contain large and small particles of similar or different material and are self-assembled from dilute dispersions with particle size ratios ranging from 0.10 to 0.50. This allows masks with variable morphology and thus production of chemical patterns of tunable geometry. Finally, the Au or SiO(2) regions of the pattern are surface modified with protein resistant oligoethyleneglycol self-assembled molecules, which facilitates site selective adsorption of proteins into the unmodified regions of the pattern. This we show with fluorescently labeled bovine serum albumin.
- Published
- 2011
- Full Text
- View/download PDF
25. Carotenoid photoprotection in artificial photosynthetic antennas.
- Author
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Kloz M, Pillai S, Kodis G, Gust D, Moore TA, Moore AL, van Grondelle R, and Kennis JT
- Subjects
- Electron Transport, Energy Transfer, Evolution, Molecular, Isoindoles, Toluene chemistry, Carotenoids chemistry, Indoles chemistry, Photosynthesis, Tetrapyrroles chemistry
- Abstract
A series of phthalocyanine-carotenoid dyads in which a phenylamino group links a phthalocyanine to carotenoids having 8-11 backbone double bonds were examined by visible and near-infrared femtosecond pump-probe spectroscopy combined with global fitting analysis. The series of molecules has permitted investigation of the role of carotenoids in the quenching of excited states of cyclic tetrapyrroles. The transient behavior varied dramatically with the length of the carotenoid and the solvent environment. Clear spectroscopic signatures of radical species revealed photoinduced electron transfer as the main quenching mechanism for all dyads dissolved in a polar solvent (THF), and the quenching rate was almost independent of carotenoid length. However, in a nonpolar solvent (toluene), quenching rates displayed a strong dependence on the conjugation length of the carotenoid and the mechanism did not include charge separation. The lack of any rise time components of a carotenoid S(1) signature in all experiments in toluene suggests that an excitonic coupling between the carotenoid S(1) state and phthalocyanine Q state, rather than a conventional energy transfer process, is the major mechanism of quenching. A pronounced inhomogeneity of the system was observed and attributed to the presence of a phenyl-amino linker between phthalocyanine and carotenoids. On the basis of accumulated work on various caroteno-phthalocyanine dyads and triads, we have now identified three mechanisms of tetrapyrrole singlet excited state quenching by carotenoids in artificial systems: (i) Car-Pc electron transfer and recombination; (ii)(1) Pc to Car S(1) energy transfer and fast internal conversion to the Car ground state; (iii) excitonic coupling between (1)Pc and Car S(1) and ensuing internal conversion to the ground state of the carotenoid. The dominant mechanism depends upon the exact molecular architecture and solvent environment. These synthetic systems are providing a deeper understanding of structural and environmental effects on the interactions between carotenoids and tetrapyrroles and thereby better defining their role in controlling natural photosynthetic systems., (© 2011 American Chemical Society)
- Published
- 2011
- Full Text
- View/download PDF
26. Two-photon study on the electronic interactions between the first excited singlet states in carotenoid-tetrapyrrole dyads.
- Author
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Liao PN, Pillai S, Gust D, Moore TA, Moore AL, and Walla PJ
- Subjects
- Chlorophyll chemistry, Light, Light-Harvesting Protein Complexes chemistry, Molecular Structure, Stereoisomerism, Carotenoids chemistry, Electrons, Photons, Quantum Theory, Tetrapyrroles chemistry
- Abstract
Electronic interactions between the first excited states (S(1)) of carotenoids (Car) of different conjugation lengths (8-11 double bonds) and phthalocyanines (Pc) in different Car-Pc dyad molecules were investigated by two-photon spectroscopy and compared with Car S(1)-chlorophyll (Chl) interactions in photosynthetic light harvesting complexes (LHCs). The observation of Chl/Pc fluorescence after selective two-photon excitation of the Car S(1) state allowed sensitive monitoring of the flow of energy between Car S(1) and Pc or Chl. It is found that two-photon excitation excites to about 80% to 100% exclusively the carotenoid state Car S(1) and that only a small fraction of direct tetrapyrrole two-photon excitation occurs. Amide-linked Car-Pc dyads in tetrahydrofuran demonstrate a molecular gear shift mechanism in that effective Car S(1) → Pc energy transfer is observed in a dyad with 9 double bonds in the carotenoid, whereas in similar dyads with 11 double bonds in the carotenoid, the Pc fluorescence is strongly quenched by Pc → Car S(1) energy transfer. In phenylamino-linked Car-Pc dyads in toluene extremely large electronic interactions between the Car S(1) state and Pc were observed, particularly in the case of a dyad in which the carotenoid contained 10 double bonds. This observation together with previous findings in the same system provides strong evidence for excitonic Car S(1)-Pc Q(y) interactions. Very similar results were observed with photosynthetic LHC II complexes in the past, supporting an important role of such interactions in photosynthetic down-regulation.
- Published
- 2011
- Full Text
- View/download PDF
27. Heavier alkaline earth metal borohydride complexes stabilized by beta-diketiminate ligand.
- Author
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Pillai Sarish S, Jana A, Roesky HW, Schulz T, John M, and Stalke D
- Abstract
The reaction of KB[sec-Bu](3)H with calcium iodide [LCa(mu-I).thf](2)] (1) and strontium iodide [LSr(mu-I).thf](2) (2) yields calcium trisec-butylborohydride LCaB(sec-Bu)(3)H.thf (3) and strontium trisec-butylborohydride LSrB(sec-Bu)(3)H.thf (4) (L = CH(CMe2,6-iPr(2)C(6)H(3)N)(2)), respectively. Compounds 2, 3, and 4 were characterized by multinuclear NMR spectroscopy, mass spectrometry, elemental analysis, and single crystal X-ray analysis, whereas 1 was characterized without X-ray structural analysis. Compounds 3 and 4 are monomeric in the solid state with a hydride ligation between the metal and boron centers.
- Published
- 2010
- Full Text
- View/download PDF
28. Preventing protein adsorption from a range of surfaces using an aqueous fish protein extract.
- Author
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Pillai S, Arpanaei A, Meyer RL, Birkedal V, Gram L, Besenbacher F, and Kingshott P
- Subjects
- Adsorption, Animals, Fishes, Kinetics, Microscopy, Atomic Force, Microscopy, Fluorescence, Surface Properties, Proteins chemistry
- Abstract
We utilize an aqueous extract of fish proteins (FPs) as a coating for minimizing the adsorption of fibrinogen (Fg) and human serum albumin (HSA). The surfaces include stainless steel (SS), gold (Au), silicon dioxide (SiO(2)), and poly(styrene) (PS). The adsorption processes (kinetics and adsorbed mass) are followed by quartz crystal microbalance with dissipation (QCM-D). Complementary surface information is provided by X-ray photoelectron spectroscopy (XPS) and atomic force microscopy (AFM). QCM-D shows no mass increases to any of the FP-coated surfaces upon treating with Fg or HSA. Also, when Fg- or HSA-coated surfaces are exposed to the FPs, a significant increase in adsorbed mass occurs because the FPs are highly surface-active displacing Fg. Additionally, fluorescence microscopy confirms that very little Fg adsorbs to the FP-coated surfaces. We propose that FP coatings prevent protein adsorption by steric stabilization and could be an alternative method for preventing unwanted bioadhesion on medical materials.
- Published
- 2009
- Full Text
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29. Using a hydrazone-protected benzenediazonium salt to introduce a near-monolayer of benzaldehyde on glassy carbon surfaces.
- Author
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Malmos K, Dong M, Pillai S, Kingshott P, Besenbacher F, Pedersen SU, and Daasbjerg K
- Abstract
A methodology is described for introducing a thin layer of covalently attached benzaldehyde on glassy carbon surfaces using aryl diazonium chemistry. Usually the electroreduction of aryl diazonium salts leads to the formation of an ill-defined multilayer because of the involvement of highly reactive aryl radicals that can add to already-grafted aryl groups. However, in this study we used a two-step "formation-degradation" procedure to solve this problem with the first step consisting of an electrografting of an aryl diazonium salt of a long-chain and bulky alkyl hydrazone onto a glassy carbon surface. The design of the hydrazone group serves to minimize multilayer formation by greatly diminishing the grafting rate after the first-layer formation and at the same time preventing radical additions from taking place at the inner aryl ring. Another valuable property of the hydrazone group is that it easily can be deprotected to the corresponding aldehyde by acid hydrolysis (i.e., the degradation step). In this manner, a thin and well-defined film of covalently attached benzaldehyde with an estimated coverage of 4 x 10(-10) mol cm(-2) was formed. The electrochemical responses of benzaldehyde were highly reproducible and largely independent of grafting medium (water or DMSO) and along with that also the thickness of the initially grafted film. AFM and contact angle measurements support the findings. The "formation-degradation" approach thus lays the foundation for carrying out further functionalization reactions in a controlled manner.
- Published
- 2009
- Full Text
- View/download PDF
30. Divalent cation-induced variations in polyelectrolyte conformation and controlling calcite morphologies: direct observation of the phase transition by atomic force microscopy.
- Author
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Pai RK and Pillai S
- Subjects
- Acrylamides chemistry, Acrylic Resins chemistry, Alkanesulfonates chemistry, Cations, Divalent, Microscopy, Atomic Force methods, Molecular Conformation, Calcium Carbonate chemistry, Electrolytes chemistry, Magnesium chemistry, Polymers chemistry
- Abstract
In the biomineralization process, the changes in conformation of organic matrix may be a widespread phenomenon. Investigation of the structural relationship between organic and inorganic materials is the main subject. The approach taken was to extract quantitative information of the variations in polyelectrolyte conformation during the mineralization process using atomic force microscopy. The results infer the evidence of the role of polyelectrolyte conformation in mineralization of calcium carbonate and the methods for understanding the principle that govern biomineralization.
- Published
- 2008
- Full Text
- View/download PDF
31. Ordering of binary polymeric nanoparticles on hydrophobic surfaces assembled from low volume fraction dispersions.
- Author
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Mukhopadhyay R, Al-Hanbali O, Pillai S, Hemmersam AG, Meyer RL, Hunter AC, Rutt KJ, Besenbacher F, Moghimi SM, and Kingshott P
- Subjects
- Colloids chemistry, Crystallization, Hydrogen-Ion Concentration, Hydrophobic and Hydrophilic Interactions, Particle Size, Surface Properties, Nanoparticles chemistry, Polymers chemistry
- Published
- 2007
- Full Text
- View/download PDF
32. Energy transfer, excited-state deactivation, and exciplex formation in artificial caroteno-phthalocyanine light-harvesting antennas.
- Author
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Berera R, van Stokkum IH, Kodis G, Keirstead AE, Pillai S, Herrero C, Palacios RE, Vengris M, van Grondelle R, Gust D, Moore TA, Moore AL, and Kennis JT
- Subjects
- Biomimetic Materials chemical synthesis, Carotenoids chemical synthesis, Indoles chemical synthesis, Isoindoles, Light-Harvesting Protein Complexes chemical synthesis, Biomimetic Materials chemistry, Carotenoids chemistry, Energy Transfer, Indoles chemistry, Light-Harvesting Protein Complexes chemistry
- Abstract
We present results from transient absorption spectroscopy on a series of artificial light-harvesting dyads made up of a zinc phthalocyanine (Pc) covalently linked to carotenoids with 9, 10, or 11 conjugated carbon-carbon double bonds, referred to as dyads 1, 2, and 3, respectively. We assessed the energy transfer and excited-state deactivation pathways following excitation of the strongly allowed carotenoid S2 state as a function of the conjugation length. The S2 state rapidly relaxes to the S* and S1 states. In all systems we detected a new pathway of energy deactivation within the carotenoid manifold in which the S* state acts as an intermediate state in the S2-->S1 internal conversion pathway on a sub-picosecond time scale. In dyad 3, a novel type of collective carotenoid-Pc electronic state is observed that may correspond to a carotenoid excited state(s)-Pc Q exciplex. The exciplex is only observed upon direct carotenoid excitation and is nonfluorescent. In dyad 1, two carotenoid singlet excited states, S2 and S1, contribute to singlet-singlet energy transfer to Pc, making the process very efficient (>90%) while for dyads 2 and 3 the S1 energy transfer channel is precluded and only S2 is capable of transferring energy to Pc. In the latter two systems, the lifetime of the first singlet excited state of Pc is dramatically shortened compared to the 9 double-bond dyad and model Pc, indicating that the carotenoid acts as a strong quencher of the phthalocyanine excited-state energy.
- Published
- 2007
- Full Text
- View/download PDF
33. Chiral DNA gyrase inhibitors. 3. Probing the chiral preference of the active site of DNA gyrase. Synthesis of 10-fluoro-6-methyl-6,7-dihydro-9-piperazinyl- 2H-benzo[a]quinolizin-20-one-3-carboxylic acid analogues.
- Author
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Fecik RA, Devasthale P, Pillai S, Keschavarz-Shokri A, Shen L, and Mitscher LA
- Subjects
- Anti-Bacterial Agents chemistry, Anti-Bacterial Agents pharmacology, Binding Sites, Gram-Negative Bacteria drug effects, Gram-Positive Bacteria drug effects, Piperazines chemistry, Piperazines pharmacology, Quinolizines chemistry, Quinolizines pharmacology, Stereoisomerism, Structure-Activity Relationship, Anti-Bacterial Agents chemical synthesis, DNA Gyrase chemistry, Piperazines chemical synthesis, Quinolizines chemical synthesis, Topoisomerase II Inhibitors
- Abstract
In pursuit of an apparent literature anomaly, S- and R-6-methyl-6,7-dihydro-2H-benzo[a]quinolizin-2-one-3-carboxylic acids (12 and 22) were synthesized by an unambiguous route from optically active norephedrines, and their antibacterial potencies were measured. Against Gram-negative microorganisms and DNA gyrase a preference for S-absolute configuration was found whereas R-absolute stereochemistry was more active against Gram-positives. These results are in partial conflict with an earlier report. In an attempt to enhance potency, racemic 10-fluoro-9-piperazinyl (35) and related analogues were synthesized by a novel route. The latter analogues were surprisingly unimproved in potency. The implications of these findings are briefly discussed.
- Published
- 2005
- Full Text
- View/download PDF
34. Electrophore mass tag dideoxy DNA sequencing.
- Author
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Xu L, Bian N, Wang Z, Abdel-Baky S, Pillai S, Magiera D, Murugaiah V, Giese RW, Wang P, O'Keeffe T, Abushamaa H, Kutney L, Church G, Carson S, Smith D, Park M, Wronka J, and Laukien F
- Subjects
- Chromatography, High Pressure Liquid, DNA isolation & purification, Electrochemistry, Electrophoresis, Mass Spectrometry, DNA chemistry, DNA Primers chemical synthesis, Sequence Analysis, DNA methods
- Abstract
Toward a goal of dideoxy sequencing DNA utilizing electrophore labels, we prepared four electrophore-labeled DNA oligonucleotide primers. Each primer has a different electrophore and DNA sequence but a common glycol keto (alpha,beta-dihydroxyketo) release group. Cleavage of this latter group by either periodate oxidation or a thermal retroaldol reaction releases the electrophores for detection by mass spectrometry. Successful sequencing data with these primers was obtained by capillary electrophoresis on an ABI Model 310 after fluorescence dideoxy terminator cycle sequencing reactions were conducted. In a separate experiment, it was demonstrated that a cocktail of the four electrophore DNA primers could be detected as a dried sample spot by CO2 laser desorption/capillary collection/gas chromatography electron capture mass spectrometry. These results establish some feasibility for our long-term goal of high-speed multiplex electrophore mass tag dideoxy DNA sequencing. Ultimately we plan to use a higher number of electrophore mass tags and to rely on direct detection of the desorbed electrophores by electron capture time-of-flight mass spectrometry.
- Published
- 1997
- Full Text
- View/download PDF
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