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The quantum dynamical nature of hydrogen bonding in 1,2-ethanediol and monohydrated 1,2-ethanediol using different levels of ab initio theory is investigated. The degree of proton delocalization and shortening of the vibrationally averaged O-O distance was found to be dependent on the ab initio method used to generate the potential energy surface (PES) data set.

EOM-CCSD calculations are performed to evaluate two-bond (super 35)Cl-(super 15)N spin-spin coupling constants [(super 2h)J(sub Cl-N)] across the hydrogen bond in ClH:NH3 complexes. The resulting effect of the external electric fields on the nature of the hydrogen bond is analyzed.

A general method is presented for constructing, from ab initio quantum chemistry calculations, the potential energy surface (PES) for H2 absorbed in a porous crystalline material. The method is illustrated for the metal-organic framework material MOF-5. Rigid body quantum diffusion Monte Carlo simulations are used in the construction of the PES and to evaluate the quantum ground state of H2 in MOF-5, the zero-point energy, and the enthalpy of adsorption at 0 K. [ABSTRACT FROM AUTHOR]

Research is presented describing the importance of matrix effects and anharmonicity in the determination of proton-stretching frequencies in complexes which have been hydrogen-bonded.

The nuclear vibrational wave function and zero-point vibrational energy of CH5+ are calculated using quantum diffusion Monte Carlo techniques on an interpolated potential energy surface constructed from CCSD(T)/aug'-cc-pVTZ ab initio data. From this multidimensional wave function, the vibrationally averaged rotational constants and radial distribution functions for atom-atom distances within the molecule are constructed. It is found that the distributions of all 10 H-H distances are bimodal and identical. The radial distribution functions obtained for the five C-H distances are also identical, but unimodal. The three rotational constants were found to be 3.78, 3.80, and 3.83 cm-1. These values indicate that the ground state of CH5+ is significantly more symmetric than its global minimum energy structure. We conclude that the zero-point motion of CH5+ renders all five protons equivalent in the ground state and precludes the assignment of a unique structure to the molecule. [ABSTRACT FROM AUTHOR]

A general method is presented for constructing, from ab initio quantum chemistry calculations, the potential energy surface (PES) for H2 absorbed in a porous crystalline material. The method is illustrated for the metal-organic framework material MOF-5. Rigid body quantum diffusion Monte Carlo simulations are used in the construction of the PES and to evaluate the quantum ground state of H2 in MOF-5, the zero-point energy, and the enthalpy of adsorption at 0 K.

The photodissociation dynamics of H2CO molecules at energies bracketing the triple fragmentation threshold were investigated using velocity map ion imaging of the H-atom fragments. An algorithm was developed to model the experimental results as a two-step process: initially barrierless C-H bond fission on the S0 potential energy surface to form H + HCO, followed by secondary fragmentation of those HCO radicals with sufficient internal energy to overcome the small exit channel barrier on the HCO surface to form H + CO. Our model treats the first step using phase space theory (PST) and the second using a combined PST-impulsive model, with a tunneling correction. Experimentally, triple fragmentation reaches 25% of the radical (H + HCO) channel photochemical yield at energies about 1500 cm(-1) above the barrier for breaking the second bond. In addition, the triplet (T1) channel appears to reduce in importance after the barrier on the T1 surface is exceeded, slowly decreasing to <10% of the total radical yield at higher energy. The double PST-impulsive model provides a good fit to the experimental H-atom speed and energy distributions for H2CO dissociation on S0 spanning >7000 cm(-1) of available energy.

The concentrations of organic acids, key species in the formation of secondary organic aerosols, are underestimated by atmospheric chemistry models by a factor of ∼2. Vinyl alcohol (VA, CH2═CHOH, ethenol) has been suggested as a precursor to formic acid, but sufficient tropospheric sources of VA have not been identified. Here, we show that VA is formed upon irradiation of neat acetaldehyde (CH3CHO) in the actinic ultraviolet region, between 295 and 330 nm. Besides the well-known photochemical products CO and CH4, we infer up to a 15% quantum yield of VA at 20 Torr acetaldehyde pressure and a photolysis wavelength of 330 nm. The experiments confirm a recent model predicting phototautomerization of acetaldehyde to VA and imply that photolysis of small aldehydes and ketones could provide tropospheric sources of enols sufficient to impact organic acid budgets. We also report absolute infrared absorption cross sections of VA.

The influence of treatment of electron correlation, size of basis set and choice of solvation model on the predicted stabilization of zwitterionic phosphinic and phosphonic acid gamma-aminobutyric acid (GABA) analogues is investigated using ab initio molecular orbital methods and density functional theory. Density functional theory with the B3LYP functional and a composite basis set composed of the 6-31+G(2df) basis for phosphorus atoms and the 6-31+G(d,p) basis set for all other atoms is found to give an acceptable tradeoff between accuracy and computational expense. Either directly optimizing zwitterionic conformers within the conductor-like screening solvation model (COSMO) or pre-optimizing as dihydrates and then applying the COSMO solvation model give an acceptable treatment of solvation in terms of determining stable solvated structures, although directly optimizing within COSMO is simpler and less computationally expensive. With this protocol, cis-constrained phosphinic and phosphonic acid GABA analogues, which exhibit lower affinities for GABAC receptors, are found to possess only folded, intramolecularly hydrogen bonded low energy conformers. Trans-constrained analogues, on the other hand, exhibit higher affinities for GABAC receptors and are found to exist only as partially folded stable conformers. Conformationally flexible analogues can attain folded, partially folded or fully extended conformations and also have high biological activity. These results imply that the partially folded conformation is likely to be the most biologically active.

The solution-phase structures of a number of conformationally restricted gamma-aminobutyric acid (GABA) analogues are investigated at the MP2/6-31+G* level of theory, using both explicit water molecules and the conductor-like screening solvation model (COSMO) to model solvation. GABA analogues constrained in a cis conformation by either a double bond or cyclopropane ring have the potential to attain either folded, intramolecularly hydrogen-bonded, or partially folded conformations in solution. Systems constrained in a cis conformation by a cyclopentane or cyclopentene ring are more conformationally restricted and exist only in a folded, intramolecularly hydrogen-bonded form. GABA analogues constrained in a trans conformation by either a double bond or cyclopropane ring have the potential to adopt either partially folded or fully extended conformations in solution. Due to a lack of conformational flexibility, analogues that are constrained in a trans conformation by a cyclopentane or cyclopentene ring attain only partially folded conformations. Like GABA, conformationally flexible GABA analogues possess a large number of stable rotamers, and may exist in any or all of these conformations in aqueous solution. The structures of these analogues provide an essential foundation for subsequent structure-activity analysis of ligand binding at GABA receptors and transporters. This work is therefore expected to facilitate the design and development of new biologically active GABA analogues to treat GABA-related neurological disorders.