42 results on '"Jimenez, D"'
Search Results
2. Temperature Treatment of Highly Porous Zirconium-Containing Metal-Organic Frameworks Extends Drug Delivery Release
- Author
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Teplensky, MH, Fantham, M, Li, P, Wang, TC, Mehta, JP, Young, LJ, Moghadam, P, Hupp, JT, Farha, OK, Kaminski, CF, Fairen-Jimenez, D, Fantham, Marcus [0000-0002-9921-3334], Mehta, Joshua [0000-0002-9824-3697], Kaminski, Clemens [0000-0002-5194-0962], Fairen Jimenez, David [0000-0002-5013-1194], and Apollo - University of Cambridge Repository
- Subjects
Drug Liberation ,Drug Delivery Systems ,fungi ,Microscopy, Electron, Scanning ,Temperature ,Humans ,Antineoplastic Agents ,Zirconium ,Porosity ,Metal-Organic Frameworks ,HeLa Cells - Abstract
Utilizing metal-organic frameworks (MOFs) as a biological carrier can lower the amount of the active pharmaceutical ingredient (API) required in cancer treatments to provide a more efficacious therapy. In this work, we have developed a temperature treatment process for delaying the release of a model drug compound from the pores of NU-1000 and NU-901, while taking care to utilize these MOFs' large pore volume and size to achieve exceptional model drug loading percentages over 35 wt %. Video-rate super-resolution microscopy reveals movement of MOF particles when located outside of the cell boundary, and their subsequent immobilization when taken up by the cell. Through the use of optical sectioning structured illumination microscopy (SIM), we have captured high-resolution 3D images showing MOF uptake by HeLa cells over a 24 h period. We found that addition of a model drug compound into the MOF and the subsequent temperature treatment process does not affect the rate of MOF uptake by the cell. Endocytosis analysis revealed that MOFs are internalized by active transport and that inhibiting the caveolae-mediated pathway significantly reduced cellular uptake of MOFs. Encapsulation of an anticancer therapeutic, alpha-cyano-4-hydroxycinnamic acid (α-CHC), and subsequent temperature treatment produced loadings of up to 81 wt % and demonstrated efficacy at killing cells beyond the burst release effect.
- Published
- 2017
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3. Metal-Organic Nanosheets Formed via Defect-Mediated Transformation of a Hafnium Metal-Organic Framework
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Cliffe, MJ, Castillo-Martínez, E, Wu, Y, Lee, J, Forse, AC, Firth, FCN, Moghadam, PZ, Fairen Jimenez, D, Gaultois, MW, Hill, JA, Magdysyuk, OV, Slater, B, Goodwin, AL, Grey, CP, Cliffe, Matt [0000-0002-0408-7647], Wu, Yue [0000-0003-2874-8267], Lee, Jeongjae [0000-0003-4294-4993], Forse, Alexander [0000-0001-9592-9821], Firth, Francesca [0000-0002-1209-2702], Fairen Jimenez, David [0000-0002-5013-1194], Gaultois, Michael [0000-0003-2172-2507], Grey, Clare [0000-0001-5572-192X], and Apollo - University of Cambridge Repository
- Subjects
0302 Inorganic Chemistry - Abstract
We report a hafnium-containing MOF, hcp UiO-67(Hf), which is a ligand-deficient layered analogue of the face-centered cubic fcu UiO-67(Hf). hcp UiO-67 accommodates its lower ligand:metal ratio compared to fcu UiO-67 through a new structural mechanism: the formation of a condensed "double cluster" (Hf$_{12}$O$_{8}$(OH)$_{14}$), analogous to the condensation of coordination polyhedra in oxide frameworks. In oxide frameworks, variable stoichiometry can lead to more complex defect structures, e.g., crystallographic shear planes or modules with differing compositions, which can be the source of further chemical reactivity; likewise, the layered hcp UiO-67 can react further to reversibly form a two-dimensional metal-organic framework, hxl UiO-67. Both three-dimensional hcp UiO-67 and two-dimensional hxl UiO-67 can be delaminated to form metal-organic nanosheets. Delamination of hcp UiO-67 occurs through the cleavage of strong hafnium-carboxylate bonds and is effected under mild conditions, suggesting that defect-ordered MOFs could be a productive route to porous two-dimensional materials.
- Published
- 2017
4. Opening the Gate: Framework Flexibility in ZIF-8 Explored by Experiments and Simulations.
- Author
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Fairen-Jimenez, D., Moggach, S. A., Wharmby, M. T., Wright, P. A., Parsons, S., and Dürent, T.
- Subjects
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IMIDAZOLES , *ORGANIC conductors , *SEPARATION of gases , *MOLECULAR sieves , *POROSITY , *CHEMISTRY - Abstract
ZIF-8 is a zeolitic imidazole-based metal-organic framework with large cavities interconnected by narrow windows. Because the small size of the windows, it allows in principle for molecular sieving of gases such as H2 and CH4. However, the unexpected adsorption of large molecules on ZIF-8 suggests the existence of structural flexibility. ZIF-8 flexibility is explored in this work combining different experimental techniques with molecularsimulation. We show that the ZIF-8 structure is modified by gas adsorption uptake in the same way as it is at a very high pressure (i.e., 14700 bar) due to a swing effect in the imidazolate linkers, giving access to the porosity. Tuning the flexibility, and so the opening of the small windows, has a further impact on the design of advanced molecular sieving membrane materials for gas separation, adjusting the access of fluids to the porous network. [ABSTRACT FROM AUTHOR]
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- 2011
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5. Tuning the Endocytosis Mechanism of Zr-Based Metal–Organic Frameworks through Linker Functionalization
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Orellana-Tavra, C, Haddad, S, Marshall, R, Abanades Lazaro, I, Boix, G, Imaz, I, Maspoch, D, Forgan, R, and Fairen Jimenez, D
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drug delivery ,metabolic pathways ,endocytosis ,metal−organic frameworks ,3. Good health - Abstract
A critical bottleneck for the use of metal-organic frameworks (MOFs) as drug delivery systems has been allowing them to reach their intracellular targets without being degraded in the acidic environment of the lysosomes. Cells take up particles by endocytosis through multiple biochemical pathways, and the fate of these particles depends on these routes of entry. Here, we show the effect of functional group incorporation into a series of Zr-based MOFs on their endocytosis mechanisms, allowing us to design an effi-cient drug delivery system. In particular, naphthalene-2,6-dicarboxylic acid and 4,4'-biphenyldicarboxylic acid ligands promote entry through the caveolin-pathway, allowing the particles to avoid lysosomal degradation and be delivered into the cytosol, en-hancing their therapeutic activity when loaded with drugs.
6. Coassembling Mesoporous Zeolitic Imidazolate Frameworks by Directed Reticular Chemistry.
- Author
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Liu M, Asgari M, Bergmann K, Shenassa K, King G, Leontowich AFG, Fairen-Jimenez D, and Hudson ZM
- Abstract
Conventional microporous zeolitic imidazolate frameworks (ZIFs) face limitations in mass transfer and pore accessibility when dealing with large guest molecules. Here, we describe a technique for the synthesis of mesoporous ZIFs (MesoZIFs) using a strategy we term directed reticular chemistry. MesoZIF-8 was prepared through solvent evaporation-induced coassembly of polystyrene- block -poly(ethylene oxide) (PS- b -PEO), ZIF-8 building blocks, and acetic acid (AcOH), followed by amine-facilitated crystallization of ZIF-8 in the interstices of PS- b -PEO micelles. AcOH prevents the fast coordination of ZIF-8 building blocks, avoiding phase separation during coassembly. The employed amine plays a crucial role in neutralizing the crystallization environment and further deprotonating the 2-methlyimizale linker to coordinate with zinc ions. Ink bottle-shaped mesopores with tunable mesopore sizes were created by adjusting the molecular weight of PS- b -PEO. Compared to microporous ZIF-8, MesoZIF-8 exhibited enhanced performance in Knoevenagel condensation reactions involving large reactants and hydrogen storage capacity. With this study, we establish an efficient approach for synthesizing MesoZIFs with highly accessible mesopores to enhance ZIF performance in targeted applications.
- Published
- 2024
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7. IMHB-Mediated Chameleonicity in Drug Design: A Focus on Structurally Related PROTACs.
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Garcia Jimenez D, Rossi Sebastiano M, Vallaro M, Ermondi G, and Caron G
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- Humans, Ubiquitin-Protein Ligases metabolism, Drug Discovery, Proteolysis Targeting Chimera, Adaptor Proteins, Signal Transducing, Drug Design, Molecular Dynamics Simulation
- Abstract
Molecular chameleonicity may enable compounds to compensate for the unfavorable ADME properties typically associated with complex molecules, such as PROTACs. Here we present a few in silico strategies to implement chameleonicity considerations in drug design. Initially, we identified six structurally related CRBN-based PROTACs targeting BET proteins and experimentally verified whether chameleonicity is needed to obtain an acceptable physicochemical profile. Then, we utilized experimental data to validate our novel computational strategies based on tools crafted to encompass a spectrum of complexities and innovative features. After confirming that the formation of IMHBs is the primary driving factor behind chameleonicity, we initially utilized conformational sampling data to define cChameCS, an IMHB-mediated, simple, and rapid chameleonicity predictor index suitable for early drug discovery. Subsequently, we identified dynamic IMHB patterns relevant to chameleonicity through molecular dynamics simulations. Finally, we proposed a workflow for designing structurally related chameleonic PROTACs of potential application in the lead optimization process.
- Published
- 2024
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8. Expanding the Reticular Chemistry Building Block Library toward Highly Connected Nets: Ultraporous MOFs Based on 18-Connected Ternary, Trigonal Prismatic Superpolyhedra.
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Froudas KG, Vassaki M, Papadopoulos K, Tsangarakis C, Chen X, Shepard W, Fairen-Jimenez D, Tampaxis C, Charalambopoulou G, Steriotis TA, and Trikalitis PN
- Abstract
The chemistry of metal-organic frameworks (MOFs) continues to expand rapidly, providing materials with diverse structures and properties. The reticular chemistry approach, where well-defined structural building blocks are combined together to form crystalline open framework solids, has greatly accelerated the discovery of new and important materials. However, its full potential toward the rational design of MOFs relies on the availability of highly connected building blocks because these greatly reduce the number of possible structures. Toward this, building blocks with connectivity greater than 12 are highly desirable but extremely rare. We report here the discovery of novel 18-connected, trigonal prismatic, ternary building blocks ( tbb 's) and their assembly into unique MOFs, denoted as Fe- tbb -MOF- x ( x : 1, 2, 3), with hierarchical micro- and mesoporosity. The remarkable tbb is an 18-c supertrigonal prism, with three points of extension at each corner, consisting of triangular (3-c) and rectangular (4-c) carboxylate-based organic linkers and trigonal prismatic [Fe
3 (μ3 -Ο)(-COO)6 ]+ clusters. The tbb 's are linked together by an 18-c cluster made of 4-c ligands and a crystallographically distinct Fe3 (μ3 -Ο) trimer, forming overall a 3-D (3,4,4,6,6)-c five nodal net. The hierarchical, highly porous nature of Fe- tbb -MOF- x ( x : 1, 2, 3) was confirmed by recording detailed sorption isotherms of Ar, CH4 , and CO2 at 87, 112, and 195 K, respectively, revealing an ultrahigh BET area (4263-4847 m2 g-1 ) and pore volume (1.95-2.29 cm3 g-1 ). Because of the observed ultrahigh porosities, the H2 and CH4 storage properties of Fe- tbb -MOF- x were investigated, revealing well-balanced high gravimetric and volumetric deliverable capacities for cryoadsorptive H2 storage (11.6 wt %/41.4 g L-1 , 77 K/100 bar-160 K/5 bar), as well as CH4 storage at near ambient temperatures (367 mg g-1 /160 cm3 STP cm-3 , 5-100 bar at 298 K), placing these materials among the top performing MOFs. The present work opens new directions to apply reticular chemistry for the construction of novel MOFs with tunable porosities based on contracted or expanded tbb analogues.- Published
- 2024
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9. A Fluorinated BODIPY-Based Zirconium Metal-Organic Framework for In Vivo Enhanced Photodynamic Therapy.
- Author
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Chen X, Mendes BB, Zhuang Y, Conniot J, Mercado Argandona S, Melle F, Sousa DP, Perl D, Chivu A, Patra HK, Shepard W, Conde J, and Fairen-Jimenez D
- Subjects
- Humans, Animals, Mice, Zirconium therapeutic use, Photosensitizing Agents pharmacology, Photosensitizing Agents therapeutic use, Oxygen, Hypoxia, Cell Line, Tumor, Tumor Microenvironment, Metal-Organic Frameworks chemistry, Photochemotherapy methods, Triple Negative Breast Neoplasms drug therapy, Neoplasms therapy, Boron Compounds
- Abstract
Photodynamic therapy (PDT), an emergent noninvasive cancer treatment, is largely dependent on the presence of efficient photosensitizers (PSs) and a sufficient oxygen supply. However, the therapeutic efficacy of PSs is greatly compromised by poor solubility, aggregation tendency, and oxygen depletion within solid tumors during PDT in hypoxic microenvironments. Despite the potential of PS-based metal-organic frameworks (MOFs), addressing hypoxia remains challenging. Boron dipyrromethene (BODIPY) chromophores, with excellent photostability, have exhibited great potential in PDT and bioimaging. However, their practical application suffers from limited chemical stability under harsh MOF synthesis conditions. Herein, we report the synthesis of the first example of a Zr-based MOF, namely, 69-L
2 , exclusively constructed from the BODIPY-derived ligands via a single-crystal to single-crystal post-synthetic exchange, where a direct solvothermal method is not applicable. To increase the PDT performance in hypoxia, we modify 69-L2 with fluorinated phosphate-functionalized methoxy poly(ethylene glycol). The resulting 69-L2 @F is an oxygen carrier, enabling tumor oxygenation and simultaneously acting as a PS for reactive oxygen species (ROS) generation under LED irradiation. We demonstrate that 69-L2 @F has an enhanced PDT effect in triple-negative breast cancer MDA-MB-231 cells under both normoxia and hypoxia. Following positive results, we evaluated the in vivo activity of 69-L2 @F with a hydrogel, enabling local therapy in a triple-negative breast cancer mice model and achieving exceptional antitumor efficacy in only 2 days. We envision BODIPY-based Zr-MOFs to provide a solution for hypoxia relief and maximize efficacy during in vivo PDT, offering new insights into the design of promising MOF-based PSs for hypoxic tumors.- Published
- 2024
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10. Chamelogk: A Chromatographic Chameleonicity Quantifier to Design Orally Bioavailable Beyond-Rule-of-5 Drugs.
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Garcia Jimenez D, Vallaro M, Rossi Sebastiano M, Apprato G, D'Agostini G, Rossetti P, Ermondi G, and Caron G
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- Solubility, Permeability, Pharmaceutical Preparations, Drug Discovery, Chemistry, Pharmaceutical
- Abstract
New chemical modalities in drug discovery include molecules belonging to the bRo5 chemical space. Because of their complex and flexible structure, bRo5 compounds often suffer from a poor solubility/permeability profile. Chameleonicity describes the capacity of a molecule to adapt to the environment through conformational changes; the design of molecular chameleons is a medicinal chemistry strategy simultaneously optimizing solubility and permeability. A default method to quantify chameleonicity in early drug discovery is still missing. Here we introduce Chamelogk, an automated, fast, and cheap chromatographic descriptor of chameleonicity. Moreover, we report measurements for 55 Ro5 and bRo5 compounds and validate our method with literature data. Then, selected case studies (macrocycles, nonmacrocyclic compounds, and PROTACs) are used to illustrate the application of Chamelogk in combination with lipophilicity (BRlogD) and polarity (Δ log k
w IAM ) descriptors. Overall, we show how Chamelogk deserves being included in property-based drug discovery strategies to design oral bioavailable bRo5 compounds.- Published
- 2023
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11. Macrocycles in Drug Discovery─Learning from the Past for the Future.
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Garcia Jimenez D, Poongavanam V, and Kihlberg J
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- Drug Discovery, Molecular Conformation, Macrocyclic Compounds chemistry, Biological Products chemistry
- Abstract
We have analyzed FDA-approved macrocyclic drugs, clinical candidates, and the recent literature to understand how macrocycles are used in drug discovery. Current drugs are mainly used in infectious disease and oncology, while oncology is the major indication for the clinical candidates and in the literature Most macrocyclic drugs bind to targets that have difficult to drug binding sites. Natural products have provided 80-90% of the drugs and clinical candidates, whereas macrocycles in ChEMBL have less complex structures. Macrocycles usually reside in the beyond the Rule of 5 chemical space, but 30-40% of the drugs and clinical candidates are orally bioavailable. Simple bi-descriptor models, i.e., HBD ≤ 7 in combination with either MW < 1000 Da or cLogP > 2.5, distinguished orals from parenterals and can be used as filters in design. We propose that recent breakthroughs in conformational analysis and inspiration from natural products will further improve the de novo design of macrocycles.
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- 2023
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12. Feasibility of Coacervate-Like Nanostructure for Instant Drug Nanoformulation.
- Author
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Zhu GH, Azharuddin M, Pramanik B, Roberg K, Biswas SK, D'arcy P, Lu M, Kaur A, Chen A, Dhara AK, Chivu A, Zhuang Y, Baker A, Liu X, Fairen-Jimenez D, Mazumder B, Chen R, Kaminski CF, Kaminski Schierle GS, Hinkula J, Slater NKH, and Patra HK
- Subjects
- Humans, Feasibility Studies, Doxorubicin pharmacology, Doxorubicin chemistry, Drug Carriers chemistry, Cell Line, Tumor, Drug Delivery Systems, Neoplasms pathology, Nanostructures, Nanoparticles chemistry
- Abstract
Despite the enormous advancements in nanomedicine research, a limited number of nanoformulations are available on the market, and few have been translated to clinics. An easily scalable, sustainable, and cost-effective manufacturing strategy and long-term stability for storage are crucial for successful translation. Here, we report a system and method to instantly formulate NF achieved with a nanoscale polyelectrolyte coacervate-like system, consisting of anionic pseudopeptide poly(l-lysine isophthalamide) derivatives, polyethylenimine, and doxorubicin (Dox) via simple "mix-and-go" addition of precursor solutions in seconds. The coacervate-like nanosystem shows enhanced intracellular delivery of Dox to patient-derived multidrug-resistant (MDR) cells in 3D tumor spheroids. The results demonstrate the feasibility of an instant drug formulation using a coacervate-like nanosystem. We envisage that this technique can be widely utilized in the nanomedicine field to bypass the special requirement of large-scale production and elongated shelf life of nanomaterials.
- Published
- 2023
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13. Homochiral Porous Metal-Organic Polyhedra with Multiple Kinds of Vertices.
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Tang X, Meng C, Rampal N, Li A, Chen X, Gong W, Jiang H, Fairen-Jimenez D, Cui Y, and Liu Y
- Abstract
Metal-organic polyhedra featuring non-Archimedean/Platonic architectures with multiple kinds of vertices have aroused great attention for their fascinating structures and properties but are yet challenging to achieve. Here, we report a combinatorial strategy to make such nonclassic polyhedral cages by combining kinetically labile metal ions with non-planar organic linkers instead of the usual only inert metal centers and planar ligands. This facilitates the synthesis of an enantiopure twisted tetra(3-pyridyl)-based TADDOL (TADDOL = tetraaryl-1,3-dioxolane-4,5-dimethanol) ligand ( L ) capable of binding Ni(II) ions to produce a regular convex cage, Ni
6 L8 , with two mixed metal/organic vertices and three rarely reported concave cages Ni14 L8 , Ni18 L12 , and Ni24 L16 with three or four mixed vertices. Each of the cages has an amphiphilic cavity decorated with chiral dihydroxyl functionalities and packs into a three-dimensional structure. The enantioselective adsorption and separation performances of the cages are strongly dependent on their pore structure features. Particularly, Ni14 L8 and Ni18 L12 with wide openings can be solid adsorbents for the adsorptive and solid-phase extractive separation of a variety of racemic spirodiols with up to 98% ee, whereas Ni6 L8 and Ni24 L16 with smaller pore apertures cannot adsorb the racemates. The combination of single-crystal X-ray diffraction analysis of the host-guest adduct and GCMC simulation indicates that the enantiospecific recognition capabilities originate from the well-organized chiral inner sphere as well as multiple interactions within the chiral microenvironment. This work therefore provides an attractive strategy for the rational design of polyhedral cages, showing geometrically fascinating structures with properties different from those of classic assemblies.- Published
- 2023
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14. Computational Characterization of Zr-Oxide MOFs for Adsorption Applications.
- Author
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Oktavian R, Schireman R, Glasby LT, Huang G, Zanca F, Fairen-Jimenez D, Ruggiero MT, and Moghadam PZ
- Abstract
Zr-oxide secondary building units construct metal-organic framework (MOF) materials with excellent gas adsorption properties and high mechanical, thermal, and chemical stability. These attributes have led Zr-oxide MOFs to be well-recognized for a wide range of applications, including gas storage and separation, catalysis, as well as healthcare domain. Here, we report structure search methods within the Cambridge Structural Database (CSD) to create a curated subset of 102 Zr-oxide MOFs synthesized to date, bringing a unique record for all researchers working in this area. For the identified structures, we manually corrected the proton topology of hydroxyl and water molecules on the Zr-oxide nodes and characterized their textural properties, Brunauer-Emmett-Teller (BET) area, and topology. Importantly, we performed systematic periodic density functional theory (DFT) calculations comparing 25 different combinations of basis sets and functionals to calculate framework partial atomic charges for use in gas adsorption simulations. Through experimental verification of CO
2 adsorption in selected Zr-oxide MOFs, we demonstrate the sensitivity of CO2 adsorption predictions at the Henry's regime to the choice of the DFT method for partial charge calculations. We characterized Zr-MOFs for their CO2 adsorption performance via high-throughput grand canonical Monte Carlo (GCMC) simulations and revealed how the chemistry of the Zr-oxide node could have a significant impact on CO2 uptake predictions. We found that the maximum CO2 uptake is obtained for structures with the heat of adsorption values >25 kJ/mol and the largest cavity diameters of ca. 6-7 Å. Finally, we introduced augmented reality (AR) visualizations as a means to bring adsorption phenomena alive in porous adsorbents and to dynamically explore gas adsorption sites in MOFs.- Published
- 2022
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15. Refinement of Computational Access to Molecular Physicochemical Properties: From Ro5 to bRo5.
- Author
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Rossi Sebastiano M, Garcia Jimenez D, Vallaro M, Caron G, and Ermondi G
- Subjects
- Molecular Dynamics Simulation, Solvents, Thalidomide analogs & derivatives, Thalidomide chemistry, Water, Computational Chemistry methods, Drug Discovery methods, Saquinavir chemistry
- Abstract
There is a need of computational tools to rank bRo5 drug candidates in the very early phases of drug discovery when chemical matter is unavailable. In this study, we selected three compounds: (a) a Ro5 drug (Pomalidomide), (b) a bRo5 orally available drug (Saquinavir), and (c) a polar PROTAC (CMP 98) to focus on computational access to physicochemical properties. To provide a benchmark, the three compounds were first experimentally characterized for their lipophilicity, polarity, IMHBs, and chameleonicity. To reproduce the experimental information content, we generated conformer ensembles with conformational sampling and molecular dynamics in both water and nonpolar solvents. Then we calculated Rgyr, 3D PSA, and IMHB number. An innovative pool of strategies for data analysis was then provided. Overall, we report a contribution to close the gap between experimental and computational methods for characterizing bRo5 physicochemical properties.
- Published
- 2022
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16. Densified HKUST-1 Monoliths as a Route to High Volumetric and Gravimetric Hydrogen Storage Capacity.
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Madden DG, O'Nolan D, Rampal N, Babu R, Çamur C, Al Shakhs AN, Zhang SY, Rance GA, Perez J, Maria Casati NP, Cuadrado-Collados C, O'Sullivan D, Rice NP, Gennett T, Parilla P, Shulda S, Hurst KE, Stavila V, Allendorf MD, Silvestre-Albero J, Forse AC, Champness NR, Chapman KW, and Fairen-Jimenez D
- Abstract
We are currently witnessing the dawn of hydrogen (H
2 ) economy, where H2 will soon become a primary fuel for heating, transportation, and long-distance and long-term energy storage. Among diverse possibilities, H2 can be stored as a pressurized gas, a cryogenic liquid, or a solid fuel via adsorption onto porous materials. Metal-organic frameworks (MOFs) have emerged as adsorbent materials with the highest theoretical H2 storage densities on both a volumetric and gravimetric basis. However, a critical bottleneck for the use of H2 as a transportation fuel has been the lack of densification methods capable of shaping MOFs into practical formulations while maintaining their adsorptive performance. Here, we report a high-throughput screening and deep analysis of a database of MOFs to find optimal materials, followed by the synthesis, characterization, and performance evaluation of an optimal monolithic MOF (mono MOF) for H2 storage. After densification, thismono MOF stores 46 g L-1 H2 at 50 bar and 77 K and delivers 41 and 42 g L-1 H2 at operating pressures of 25 and 50 bar, respectively, when deployed in a combined temperature-pressure (25-50 bar/77 K → 5 bar/160 K) swing gas delivery system. This performance represents up to an 80% reduction in the operating pressure requirements for delivering H2 gas when compared with benchmark materials and an 83% reduction compared to compressed H2 gas. Our findings represent a substantial step forward in the application of high-density materials for volumetric H2 storage applications.- Published
- 2022
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17. Turning Molecular Springs into Nano-Shock Absorbers: The Effect of Macroscopic Morphology and Crystal Size on the Dynamic Hysteresis of Water Intrusion-Extrusion into-from Hydrophobic Nanopores.
- Author
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Zajdel P, Madden DG, Babu R, Tortora M, Mirani D, Tsyrin NN, Bartolomé L, Amayuelas E, Fairen-Jimenez D, Lowe AR, Chorążewski M, Leao JB, Brown CM, Bleuel M, Stoudenets V, Casciola CM, Echeverría M, Bonilla F, Grancini G, Meloni S, and Grosu Y
- Abstract
Controlling the pressure at which liquids intrude (wet) and extrude (dry) a nanopore is of paramount importance for a broad range of applications, such as energy conversion, catalysis, chromatography, separation, ionic channels, and many more. To tune these characteristics, one typically acts on the chemical nature of the system or pore size. In this work, we propose an alternative route for controlling both intrusion and extrusion pressures via proper arrangement of the grains of the nanoporous material. To prove the concept, dynamic intrusion-extrusion cycles for powdered and monolithic ZIF-8 metal-organic framework were conducted by means of water porosimetry and in operando neutron scattering. We report a drastic increase in intrusion-extrusion dynamic hysteresis when going from a fine powder to a dense monolith configuration, transforming an intermediate performance of the ZIF-8 + water system (poor molecular spring) into a desirable shock-absorber with more than 1 order of magnitude enhancement of dissipated energy per cycle. The obtained results are supported by MD simulations and pave the way for an alternative methodology of tuning intrusion-extrusion pressure using a macroscopic arrangement of nanoporous material.
- Published
- 2022
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18. Formulation of Metal-Organic Framework-Based Drug Carriers by Controlled Coordination of Methoxy PEG Phosphate: Boosting Colloidal Stability and Redispersibility.
- Author
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Chen X, Zhuang Y, Rampal N, Hewitt R, Divitini G, O'Keefe CA, Liu X, Whitaker DJ, Wills JW, Jugdaohsingh R, Powell JJ, Yu H, Grey CP, Scherman OA, and Fairen-Jimenez D
- Subjects
- Cell Survival drug effects, Doxorubicin chemistry, Doxorubicin metabolism, Doxorubicin pharmacology, Drug Carriers chemical synthesis, Drug Liberation, HeLa Cells, Humans, Molecular Dynamics Simulation, Nanoparticles chemistry, Phosphates chemistry, Drug Carriers chemistry, Metal-Organic Frameworks chemistry, Polyethylene Glycols chemistry
- Abstract
Metal-organic framework nanoparticles (nanoMOFs) have been widely studied in biomedical applications. Although substantial efforts have been devoted to the development of biocompatible approaches, the requirement of tedious synthetic steps, toxic reagents, and limitations on the shelf life of nanoparticles in solution are still significant barriers to their translation to clinical use. In this work, we propose a new postsynthetic modification of nanoMOFs with phosphate-functionalized methoxy polyethylene glycol (mPEG-PO
3 ) groups which, when combined with lyophilization, leads to the formation of redispersible solid materials. This approach can serve as a facile and general formulation method for the storage of bare or drug-loaded nanoMOFs. The obtained PEGylated nanoMOFs show stable hydrodynamic diameters, improved colloidal stability, and delayed drug-release kinetics compared to their parent nanoMOFs. Ex situ characterization and computational studies reveal that PEGylation of PCN-222 proceeds in a two-step fashion. Most importantly, the lyophilized, PEGylated nanoMOFs can be completely redispersed in water, avoiding common aggregation issues that have limited the use of MOFs in the biomedical field to the wet form-a critical limitation for their translation to clinical use as these materials can now be stored as dried samples. The in vitro performance of the addition of mPEG-PO3 was confirmed by the improved intracellular stability and delayed drug-release capability, including lower cytotoxicity compared with that of the bare nanoMOFs. Furthermore, z -stack confocal microscopy images reveal the colocalization of bare and PEGylated nanoMOFs. This research highlights a facile PEGylation method with mPEG-PO3 , providing new insights into the design of promising nanocarriers for drug delivery.- Published
- 2021
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19. Intramolecular Photoinduced Charge Transfer and Recombination Dynamics in Vinylarene Terminated Organosilanes.
- Author
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Barrett BJ, Jimenez D, Klausen RS, and Bragg AE
- Subjects
- Electron Transport, Electrons, Recombination, Genetic, Spectrum Analysis, Organosilicon Compounds
- Abstract
We report on charge-transfer dynamics of newly designed acceptor-donor-acceptor organosilanes, with a specific focus on how donor-acceptor combination and local chemical environment can be used to control the lifetime for intramolecular charge-separation between silane electron donors and organic acceptors. In this work linear oligosilanes were capped with arene-vinyl end groups of variable electron-accepting strength: weak (diester vinyl), intermediate (ester,cyano vinyl), and strong (dicyanovinyl). Ultrafast transient absorption spectroscopy was used to characterize their structure-dependent charge-transfer and recombination behaviors. All structures exhibit similar photoinduced ultrafast spectral dynamics that we ascribe to relaxation of the nascent charge-separated excited state followed by a return to the ground state via charge recombination. We find that relaxation of the nascent "hot" charge-separated excited state scales with the strength of dipole-dipole interactions between solvent molecules and the polar arene-vinyl acceptor. Furthermore, electron-accepting strength governs whether electronic coupling dictates charge recombination rate: weak acceptors produce charge-separated states that exhibit relatively large electronic coupling for back-electron transfer (approaching the adiabatic limit) that result in fast recombination, whereas the strong and moderate-strength acceptors support more stable charge-separated states with weaker coupling and longer lifetimes. We find that recombination rates increase substantially for structures with weak and moderate-strength acceptors in cyclohexane (i.e., negligible solvent reorganization energy), which we attribute to an increased electronic coupling in a nonpolar solvent environment where charge pairs are weakly screened. In contrast, for structures with strong electron acceptors, the very low reorganization energy of cyclohexane places back-electron transfer even further into the Marcus inverted regime, with a resultant increase in charge-separation lifetime. Together these results provide critical insights on how to tune photoinduced charge-transfer behavior in organic-inorganic hybrids that have potential material applications in molecular electronics and optoelectronics.
- Published
- 2021
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20. Rational Control of Molecular Properties Is Mandatory to Exploit the Potential of PROTACs as Oral Drugs.
- Author
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Ermondi G, Garcia Jimenez D, Rossi Sebastiano M, and Caron G
- Abstract
To obtain new oral drugs in the beyond rule of five space, PROTACs among others, molecular properties should be optimized in early drug discovery. Degraders call for design strategies which focus on intramolecular interaction and chameleonicity. In parallel, tailored revalidation of permeability assessment and prediction methods becomes fundamental in this innovative chemical space., Competing Interests: The authors declare no competing financial interest., (© 2021 The Authors. Published by American Chemical Society.)
- Published
- 2021
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21. Shaping the Future of Fuel: Monolithic Metal-Organic Frameworks for High-Density Gas Storage.
- Author
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Connolly BM, Madden DG, Wheatley AEH, and Fairen-Jimenez D
- Abstract
The environmental benefits of cleaner, gaseous fuels such as natural gas and hydrogen are widely reported. Yet, practical usage of these fuels is inhibited by current gas storage technology. Here, we discuss the wide-ranging potential of gas-fuels to revolutionize the energy sector and introduce the limitations of current storage technology that prevent this transition from taking place. The practical capabilities of adsorptive gas storage using porous, crystalline metal-organic frameworks (MOFs) are examined with regard to recent benchmark results and ultimate storage targets in this field. In particular, the industrial limitations of typically powdered MOFs are discussed while recent breakthroughs in MOF processing are highlighted. We offer our perspective on the future of practical, rather than purely academic, MOF developments in the increasingly critical field of environmental fuel storage.
- Published
- 2020
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22. Design of a Functionalized Metal-Organic Framework System for Enhanced Targeted Delivery to Mitochondria.
- Author
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Haddad S, Abánades Lázaro I, Fantham M, Mishra A, Silvestre-Albero J, Osterrieth JWM, Kaminski Schierle GS, Kaminski CF, Forgan RS, and Fairen-Jimenez D
- Subjects
- Humans, Drug Delivery Systems methods, Metal-Organic Frameworks metabolism, Mitochondria metabolism
- Abstract
Mitochondria play a key role in oncogenesis and constitute one of the most important targets for cancer treatments. Although the most effective way to deliver drugs to mitochondria is by covalently linking them to a lipophilic cation, the in vivo delivery of free drugs still constitutes a critical bottleneck. Herein, we report the design of a mitochondria-targeted metal-organic framework (MOF) that greatly increases the efficacy of a model cancer drug, reducing the required dose to less than 1% compared to the free drug and ca. 10% compared to the nontargeted MOF. The performance of the system is evaluated using a holistic approach ranging from microscopy to transcriptomics. Super-resolution microscopy of MCF-7 cells treated with the targeted MOF system reveals important mitochondrial morphology changes that are clearly associated with cell death as soon as 30 min after incubation. Whole transcriptome analysis of cells indicates widespread changes in gene expression when treated with the MOF system, specifically in biological processes that have a profound effect on cell physiology and that are related to cell death. We show how targeting MOFs toward mitochondria represents a valuable strategy for the development of new drug delivery systems.
- Published
- 2020
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23. Biocompatible, Crystalline, and Amorphous Bismuth-Based Metal-Organic Frameworks for Drug Delivery.
- Author
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Orellana-Tavra C, Köppen M, Li A, Stock N, and Fairen-Jimenez D
- Subjects
- Antineoplastic Agents toxicity, Bismuth toxicity, Cell Survival drug effects, Delayed-Action Preparations, Drug Stability, HeLa Cells, Humans, Metal-Organic Frameworks toxicity, Antineoplastic Agents chemistry, Bismuth chemistry, Drug Delivery Systems methods, Metal-Organic Frameworks chemistry
- Abstract
The synthetic flexibility of metal-organic frameworks (MOFs) with high loading capacities and biocompatibility makes them ideal candidates as drug delivery systems (DDSs). Here, we report the use of CAU-7, a biocompatible bismuth-based MOF, for the delivery of two cancer drugs, sodium dichloroacetate (DCA) and α-cyano-4-hydroxycinnamic acid (α-CHC). We achieved loadings of 33 and 9 wt % for DCA and α-CHC, respectively. Interestingly, CAU-7 showed a gradual release of the drugs, achieving a release time of up to 17 days for DCA and 31 days for α-CHC. We then performed mechanical and thermal amorphization processes to attempt to delay the delivery of guest molecules even more. With the thermal treatment, we were able to achieve an outstanding 32% slower release of α-CHC from the thermally treated CAU-7. Using in vitro studies and endocytosis inhibitors, confocal microscopy, and fluorescence-activated cell sorting, we also demonstrated that CAU-7 was successfully internalized by cancer cells, partially avoiding lysosome degradation. Finally, we showed that CAU-7 loaded either with DCA or α-CHC had a higher therapeutic efficiency compared with the free drug approach, making CAU-7 a great option for biomedical application.
- Published
- 2020
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24. On-Surface Synthesis and Characterization of a Cycloarene: C108 Graphene Ring.
- Author
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Fan Q, Martin-Jimenez D, Werner S, Ebeling D, Koehler T, Vollgraff T, Sundermeyer J, Hieringer W, Schirmeisen A, and Gottfried JM
- Abstract
The synthesis of cycloarenes in solution is challenging because of their low solubility and the often hindered cyclodehydrogenation reaction of their nonplanar precursors. Using an alternative on-surface synthesis protocol, we achieved an unprecedented double-stranded hexagonal cycloarene containing 108 sp
2 carbon atoms. Its synthesis is based on hierarchical Ullmann coupling and cyclodehydrogenation of a specially designed precursor on a Au(111) surface. The structure and other properties of the cycloarene are investigated by scanning tunneling microscopy/spectroscopy, atomic force microscopy, and density functional theory calculations.- Published
- 2020
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25. Nanoribbons with Nonalternant Topology from Fusion of Polyazulene: Carbon Allotropes beyond Graphene.
- Author
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Fan Q, Martin-Jimenez D, Ebeling D, Krug CK, Brechmann L, Kohlmeyer C, Hilt G, Hieringer W, Schirmeisen A, and Gottfried JM
- Abstract
Various two-dimensional (2D) carbon allotropes with nonalternant topologies, such as pentaheptites and phagraphene, have been proposed. Predictions indicate that these metastable carbon polymorphs, which contain odd-numbered rings, possess unusual (opto)electronic properties. However, none of these materials has been achieved experimentally due to synthetic challenges. In this work, by using on-surface synthesis, nanoribbons of the nonalternant graphene allotropes, phagraphene and tetra-penta-hepta(TPH)-graphene, have been obtained by dehydrogenative C-C coupling of 2,6-polyazulene chains. These chains were formed in a preceding reaction step via on-surface Ullmann coupling of 2,6-dibromoazulene. Low-temperature scanning probe microscopies with CO-functionalized tips and density functional theory calculations have been used to elucidate their structural properties. The proposed synthesis of nonalternant carbon nanoribbons from the fusion of synthetic line-defects may pave the way for large-area preparation of novel 2D carbon allotropes.
- Published
- 2019
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26. Core-Shell Gold Nanorod@Zirconium-Based Metal-Organic Framework Composites as in Situ Size-Selective Raman Probes.
- Author
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Osterrieth JWM, Wright D, Noh H, Kung CW, Vulpe D, Li A, Park JE, Van Duyne RP, Moghadam PZ, Baumberg JJ, Farha OK, and Fairen-Jimenez D
- Abstract
Nanoparticle encapsulation inside zirconium-based metal-organic frameworks (NP@MOF) is hard to control, and the resulting materials often have nonuniform morphologies with NPs on the external surface of MOFs and NP aggregates inside the MOFs. In this work, we report the controlled encapsulation of gold nanorods (AuNRs) by a scu-topology Zr-MOF, via a room-temperature MOF assembly. This is achieved by functionalizing the AuNRs with poly(ethylene glycol) surface ligands, allowing them to retain colloidal stability in the precursor solution and to seed the MOF growth. Using this approach, we achieve core-shell yields exceeding 99%, tuning the MOF particle size via the solution concentration of AuNRs. The functionality of AuNR@MOFs is demonstrated by using the AuNRs as embedded probes for selective surface-enhanced Raman spectroscopy (SERS). The AuNR@MOFs are able to both take-up or block molecules from the pores, thereby facilitating highly selective sensing at the AuNR ends. This proof-of-principle study serves to present both the outstanding level of control in the synthesis and the high potential for AuNR@Zr-MOF composites for SERS.
- Published
- 2019
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27. Surface-Functionalization of Zr-Fumarate MOF for Selective Cytotoxicity and Immune System Compatibility in Nanoscale Drug Delivery.
- Author
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Abánades Lázaro I, Haddad S, Rodrigo-Muñoz JM, Marshall RJ, Sastre B, Del Pozo V, Fairen-Jimenez D, and Forgan RS
- Subjects
- Animals, Cell Survival drug effects, HEK293 Cells, HeLa Cells, Humans, MCF-7 Cells, Metal-Organic Frameworks toxicity, Drug Delivery Systems, Fumarates chemistry, Immune System drug effects, Metal-Organic Frameworks chemistry, Metal-Organic Frameworks pharmacology, Zirconium chemistry
- Abstract
Metal-organic frameworks (MOFs), network structures wherein metal ions or clusters link organic ligands into porous materials, are being actively researched as nanoscale drug delivery devices as they offer tunable structures with high cargo loading that can easily be further functionalized for targeting and enhanced physiological stability. The excellent biocompatibility of Zr has meant that its MOFs are among the most studied to date, in particular the archetypal Zr terephthalate UiO-66. In contrast, the isoreticular analog linked by fumarate (Zr-fum) has received little attention, despite the endogenous linker being part of the Krebs cycle. Herein, we report a comprehensive study of Zr-fum in the context of drug delivery. Reducing particle size is shown to increase uptake by cancer cells while reducing internalization by macrophages, immune system cells that remove foreign objects from the bloodstream. Zr-fum is compatible with defect loading of the drug dichloroacetate (DCA) as well as surface modification during synthesis, through coordination modulation and postsynthetically. DCA-loaded, PEGylated Zr-fum shows selective in vitro cytotoxicity toward HeLa and MCF-7 cancer cells, likely as a consequence of its enhanced caveolae-mediated endocytosis compared to uncoated precursors, and it is well tolerated by HEK293 kidney cells, J774 macrophages, and human peripheral blood lymphocytes. Compared to UiO-66, Zr-fum is more efficient at transporting the drug mimic calcein into HeLa cells, and DCA-loaded, PEGylated Zr-fum is more effective at reducing HeLa and MCF-7 cell proliferation than the analogous UiO-66 sample. In vitro examination of immune system response shows that Zr-fum samples induce less reactive oxygen species than UiO-66 analogs, possibly as a consequence of the linker being endogenous, and do not activate the C3 and C4 complement cascade pathways, suggesting that Zr-fum can avoid phagocytic activation. The results show that Zr-fum is an attractive alternative to UiO-66 for nanoscale drug delivery, and that a wide range of in vitro experiments is available to greatly inform the design of drug delivery systems prior to early stage animal studies.
- Published
- 2018
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28. Mechanistic Investigation into the Selective Anticancer Cytotoxicity and Immune System Response of Surface-Functionalized, Dichloroacetate-Loaded, UiO-66 Nanoparticles.
- Author
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Abánades Lázaro I, Haddad S, Rodrigo-Muñoz JM, Orellana-Tavra C, Del Pozo V, Fairen-Jimenez D, and Forgan RS
- Subjects
- Acetates, Animals, Antineoplastic Agents, Chlorine Compounds, Drug Delivery Systems, HEK293 Cells, Humans, Immune System, Metal-Organic Frameworks, Polyethylene Glycols, Metal Nanoparticles chemistry
- Abstract
The high drug-loading and excellent biocompatibilities of metal-organic frameworks (MOFs) have led to their application as drug-delivery systems (DDSs). Nanoparticle surface chemistry dominates both biostability and dispersion of DDSs while governing their interactions with biological systems, cellular and/or tissue targeting, and cellular internalization, leading to a requirement for versatile and reproducible surface functionalization protocols. Herein, we explore not only the effect of introducing different surface functionalities to the biocompatible Zr-MOF UiO-66 but also the efficacy of three surface modification protocols: (i) direct attachment of biomolecules [folic acid (FA) and biotin (Biot)] introduced as modulators for UiO-66 synthesis, (ii) our previously reported "click-modulation" approach to covalently attach polymers [poly(ethylene glycol) (PEG), poly-l-lactide, and poly-N-isopropylacrylamide] to the surface of UiO-66 through click chemistry, and (iii) surface ligand exchange to postsynthetically coordinate FA, Biot, and heparin to UiO-66. The innovative use of a small molecule with metabolic anticancer activity, dichloroacetate (DCA), as a modulator during synthesis is described, and it is found to be compatible with all three protocols, yielding surface-coated, DCA-loaded (10-20 w/w %) nano-MOFs (70-170 nm). External surface modification generally enhances the stability and colloidal dispersion of UiO-66. Cellular internalization routes and efficiencies of UiO-66 by HeLa cervical cancer cells can be tuned by surface chemistry, and anticancer cytotoxicity of DCA-loaded MOFs correlates with the endocytosis efficiency and mechanisms. The MOFs with the most promising coatings (FA, PEG, poly-l-lactide, and poly-N-isopropylacrylamide) were extensively tested for selectivity of anticancer cytotoxicity against MCF-7 breast cancer cells and HEK293 healthy kidney cells as well as for cell proliferation and reactive oxygen species production against J774 macrophages and peripheral blood lymphocytes isolated from the blood of human donors. DCA-loaded, FA-modified UiO-66 selectively kills cancer cells without harming healthy ones or provoking immune system response in vitro, suggesting a significant targeting effect and great potential in anticancer drug delivery. The results provide mechanistic insight into the design and functionalization of MOFs for drug delivery and underline the availability of various in vitro techniques to potentially minimize early-stage in vivo animal studies following the three Rs: reduction, refinement, and replacement.
- Published
- 2018
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29. Tuning the Swing Effect by Chemical Functionalization of Zeolitic Imidazolate Frameworks.
- Author
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Hobday CL, Bennett TD, Fairen-Jimenez D, Graham AJ, Morrison CA, Allan DR, Düren T, and Moggach SA
- Abstract
Many zeolitic imidazolate frameworks (ZIFs) are promising candidates for use in separation technologies. Comprising large cavities interconnected by small windows they can be used, at least in principle, as molecular sieves where molecules smaller than the window size are able to diffuse into the material while larger molecules are rejected. However, "swing effect" or "gate opening" phenomena resulting in an enlargement of the windows have proven to be detrimental. Here, we present the first systematic experimental and computational study of the effect of chemical functionalization of the imidazole linker on the framework dynamics. Using high-pressure (HP) single-crystal X-ray diffraction, density functional theory, and grand canonical Monte Carlo simulations, we show that in the isostructural ZIF-8, ZIF-90, and ZIF-65 functional groups of increasing polarity (-CH
3 , -CHO, and -NO2 ) on the imidazole linkers provide control over the degree of rotation and thus the critical window diameter. On application of pressure, the substituted imidazolate rings rotate, resulting in an increase in both pore volume and content. Our results show that the interplay between the guest molecules and the chemical function of the imidazole linker is essential for directing the swing effect in ZIF frameworks and therefore the adsorption performance.- Published
- 2018
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30. Identification of Single Adsorbed Cations on Mica-Liquid Interfaces by 3D Force Microscopy.
- Author
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Martin-Jimenez D and Garcia R
- Abstract
Force microscope provides atomically resolved images of surfaces immersed in a liquid. The presence of different chemical species in the interface (cations, anions, water, neutral atoms) complicates the adscription of the observed features to a given species. We develop a 3D atomic force microscopy method to identify the cations adsorbed on a mica surface from a potassium chloride solution. The method is based on measuring the peak value of the attractive force within the Stern layer. The maximum of the attractive force shows site-specific variations. The positions with the highest attractive force values are associated with the presence of adsorbed potassium ions, while the other positions are associated with a local depletion of the hydration layer. This criterion provides a surface coverage of K cations that is consistent with the one reported by other techniques.
- Published
- 2017
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31. Tuning the Endocytosis Mechanism of Zr-Based Metal-Organic Frameworks through Linker Functionalization.
- Author
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Orellana-Tavra C, Haddad S, Marshall RJ, Abánades Lázaro I, Boix G, Imaz I, Maspoch D, Forgan RS, and Fairen-Jimenez D
- Abstract
A critical bottleneck for the use of metal-organic frameworks (MOFs) as drug delivery systems has been allowing them to reach their intracellular targets without being degraded in the acidic environment of the lysosomes. Cells take up particles by endocytosis through multiple biochemical pathways, and the fate of these particles depends on these routes of entry. Here, we show the effect of functional group incorporation into a series of Zr-based MOFs on their endocytosis mechanisms, allowing us to design an efficient drug delivery system. In particular, naphthalene-2,6-dicarboxylic acid and 4,4'-biphenyldicarboxylic acid ligands promote entry through the caveolin-pathway, allowing the particles to avoid lysosomal degradation and be delivered into the cytosol and enhancing their therapeutic activity when loaded with drugs.
- Published
- 2017
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32. Temperature Treatment of Highly Porous Zirconium-Containing Metal-Organic Frameworks Extends Drug Delivery Release.
- Author
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Teplensky MH, Fantham M, Li P, Wang TC, Mehta JP, Young LJ, Moghadam PZ, Hupp JT, Farha OK, Kaminski CF, and Fairen-Jimenez D
- Subjects
- Antineoplastic Agents chemistry, Antineoplastic Agents pharmacology, Drug Liberation, HeLa Cells, Humans, Microscopy, Electron, Scanning, Porosity, Temperature, Drug Delivery Systems, Metal-Organic Frameworks chemistry, Zirconium chemistry
- Abstract
Utilizing metal-organic frameworks (MOFs) as a biological carrier can lower the amount of the active pharmaceutical ingredient (API) required in cancer treatments to provide a more efficacious therapy. In this work, we have developed a temperature treatment process for delaying the release of a model drug compound from the pores of NU-1000 and NU-901, while taking care to utilize these MOFs' large pore volume and size to achieve exceptional model drug loading percentages over 35 wt %. Video-rate super-resolution microscopy reveals movement of MOF particles when located outside of the cell boundary, and their subsequent immobilization when taken up by the cell. Through the use of optical sectioning structured illumination microscopy (SIM), we have captured high-resolution 3D images showing MOF uptake by HeLa cells over a 24 h period. We found that addition of a model drug compound into the MOF and the subsequent temperature treatment process does not affect the rate of MOF uptake by the cell. Endocytosis analysis revealed that MOFs are internalized by active transport and that inhibiting the caveolae-mediated pathway significantly reduced cellular uptake of MOFs. Encapsulation of an anticancer therapeutic, alpha-cyano-4-hydroxycinnamic acid (α-CHC), and subsequent temperature treatment produced loadings of up to 81 wt % and demonstrated efficacy at killing cells beyond the burst release effect.
- Published
- 2017
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33. Metal-Organic Nanosheets Formed via Defect-Mediated Transformation of a Hafnium Metal-Organic Framework.
- Author
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Cliffe MJ, Castillo-Martínez E, Wu Y, Lee J, Forse AC, Firth FCN, Moghadam PZ, Fairen-Jimenez D, Gaultois MW, Hill JA, Magdysyuk OV, Slater B, Goodwin AL, and Grey CP
- Abstract
We report a hafnium-containing MOF, hcp UiO-67(Hf), which is a ligand-deficient layered analogue of the face-centered cubic fcu UiO-67(Hf). hcp UiO-67 accommodates its lower ligand:metal ratio compared to fcu UiO-67 through a new structural mechanism: the formation of a condensed "double cluster" (Hf
12 O8 (OH)14 ), analogous to the condensation of coordination polyhedra in oxide frameworks. In oxide frameworks, variable stoichiometry can lead to more complex defect structures, e.g., crystallographic shear planes or modules with differing compositions, which can be the source of further chemical reactivity; likewise, the layered hcp UiO-67 can react further to reversibly form a two-dimensional metal-organic framework, hxl UiO-67. Both three-dimensional hcp UiO-67 and two-dimensional hxl UiO-67 can be delaminated to form metal-organic nanosheets. Delamination of hcp UiO-67 occurs through the cleavage of strong hafnium-carboxylate bonds and is effected under mild conditions, suggesting that defect-ordered MOFs could be a productive route to porous two-dimensional materials.- Published
- 2017
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34. Enhanced gas sorption properties and unique behavior toward liquid water in a pillared-paddlewheel metal-organic framework transmetalated with Ni(II).
- Author
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Karagiaridi O, Bury W, Fairen-Jimenez D, Wilmer CE, Sarjeant AA, Hupp JT, and Farha OK
- Abstract
The synthesis of a permanently porous pillared-paddlewheel metal-organic framework (MOF) was achieved through transmetalation of Zn(II) with Ni(II). The MOF can be treated with liquid water, leading to the reversible displacement of 50% of its pillars by water molecules and resulting in a most unusual crystalline and permanently porous structure.
- Published
- 2014
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35. Elucidating the breathing of the metal-organic framework MIL-53(Sc) with ab initio molecular dynamics simulations and in situ X-ray powder diffraction experiments.
- Author
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Chen L, Mowat JP, Fairen-Jimenez D, Morrison CA, Thompson SP, Wright PA, and Düren T
- Abstract
Ab initio molecular dynamics (AIMD) simulations have been used to predict structural transitions of the breathing metal-organic framework (MOF) MIL-53(Sc) in response to changes in temperature over the range 100-623 K and adsorption of CO2 at 0-0.9 bar at 196 K. The method has for the first time been shown to predict successfully both temperature-dependent structural changes and the structural response to variable sorbate uptake of a flexible MOF. AIMD employing dispersion-corrected density functional theory accurately simulated the experimentally observed closure of MIL-53(Sc) upon solvent removal and the transition of the empty MOF from the closed-pore phase to the very-narrow-pore phase (symmetry change from P2(1)/c to C2/c) with increasing temperature, indicating that it can directly take into account entropic as well as enthalpic effects. We also used AIMD simulations to mimic the CO2 adsorption of MIL-53(Sc) in silico by allowing the MIL-53(Sc) framework to evolve freely in response to CO2 loadings corresponding to the two steps in the experimental adsorption isotherm. The resulting structures enabled the structure determination of the two CO2-containing intermediate and large-pore phases observed by experimental synchrotron X-ray diffraction studies with increasing CO2 pressure; this would not have been possible for the intermediate structure via conventional methods because of diffraction peak broadening. Furthermore, the strong and anisotropic peak broadening observed for the intermediate structure could be explained in terms of fluctuations of the framework predicted by the AIMD simulations. Fundamental insights from the molecular-level interactions further revealed the origin of the breathing of MIL-53(Sc) upon temperature variation and CO2 adsorption. These simulations illustrate the power of the AIMD method for the prediction and understanding of the behavior of flexible microporous solids.
- Published
- 2013
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36. Vapor-phase metalation by atomic layer deposition in a metal-organic framework.
- Author
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Mondloch JE, Bury W, Fairen-Jimenez D, Kwon S, DeMarco EJ, Weston MH, Sarjeant AA, Nguyen ST, Stair PC, Snurr RQ, Farha OK, and Hupp JT
- Subjects
- Models, Molecular, Molecular Structure, Organometallic Compounds chemical synthesis, Volatilization, Organometallic Compounds chemistry
- Abstract
Metal-organic frameworks (MOFs) have received attention for a myriad of potential applications including catalysis, gas storage, and gas separation. Coordinatively unsaturated metal ions often enable key functional behavior of these materials. Most commonly, MOFs have been metalated from the condensed phase (i.e., from solution). Here we introduce a new synthetic strategy capable of metallating MOFs from the gas phase: atomic layer deposition (ALD). Key to enabling metalation by ALD In MOFs (AIM) was the synthesis of NU-1000, a new, thermally stable, Zr-based MOF with spatially oriented -OH groups and large 1D mesopores and apertures.
- Published
- 2013
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37. First examples of metal-organic frameworks with the novel 3,3'-(1,2,4,5-tetrazine-3,6-diyl)dibenzoic spacer. Luminescence and adsorption properties.
- Author
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Calahorro AJ, Peñas-Sanjuan A, Melguizo M, Fairen-Jimenez D, Zaragoza G, Fernández B, Salinas-Castillo A, and Rodríguez-Diéguez A
- Subjects
- Adsorption, Animals, Benzoates chemistry, Cell Survival, Cells, Cultured, Crystallography, X-Ray, Heterocyclic Compounds chemistry, Humans, Lanthanum chemistry, Luminescence, Organometallic Compounds chemistry, Organometallic Compounds metabolism, Zinc chemistry, Benzoates chemical synthesis, Heterocyclic Compounds chemical synthesis, Organometallic Compounds chemical synthesis
- Abstract
We report the synthesis of a novel ligand, 3,3'-(1,2,4,5-tetrazine-3,6-diyl)dibenzoic acid (1). In this fragment, we have introduced two carboxylate groups with the aim of using this ligand as a linker to construct three-dimensional metal-organic frameworks (MOFs). We have been successful in the formation of zinc (2) and lanthanum (3) MOFs. The zinc compound is a two-dimensional structure, while the lanthanum material is a three-dimensional MOF with interesting channels. We include the luminescence and adsorption studies of these materials. Moreover, we have evaluated the in vitro toxicity of this novel ligand, concluding that it can be considered negligible.
- Published
- 2013
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38. Platinum electrodeposition on unsupported carbon nano-onions.
- Author
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Santiago D, Rodríguez-Calero GG, Palkar A, Barraza-Jimenez D, Galvan DH, Casillas G, Mayoral A, Jose-Yacamán M, Echegoyen L, and Cabrera CR
- Subjects
- Catalysis, Electrodes, Electroplating, Methanol chemistry, Microscopy, Electron, Transmission, Molecular Structure, Nanostructures ultrastructure, Oxidation-Reduction, Particle Size, Photoelectron Spectroscopy, Surface Properties, Thermodynamics, Fullerenes chemistry, Nanostructures chemistry, Platinum chemistry
- Abstract
An effort to develop smaller, well-dispersed catalytic materials electrochemically on high-surface-area carbon supports is required for improved fuel cell performance. A high-surface-area carbon material of interest is carbon nano-onions (CNOs), also known as multilayer fullerenes. The most convenient synthesis method for CNOs is annealing nanodiamond particles, thus retaining the size of the precursors and providing the possibility to prepare very small nanocatalysts using electrochemical techniques. In terms of pure metal catalysts, platinum is the most common catalyst used in fuel cells. The combination of Pt nanoparticles with CNOs could lead to new catalytic nanomaterials. In this work, this was accomplished by using a rotating disk-slurry electrode (RoDSE) technique. The Pt/CNO catalysts were prepared from slurries that contained functionalized CNOs and K(2)PtCl(6) as the platinum precursor in aqueous 0.1 M H(2)SO(4) solution. X-ray photoelectron spectroscopy results showed that 37% of the Pt on the CNOs is metallic Pt whereas 63% had higher binding energies, which is evidence of higher oxidation states or the presence of Pt atoms and clusters on CNOs. However, aberration-corrected scanning transmission electron microscopy of the Pt/CNOs confirmed the presence of Pt atoms and clusters on CNOs. Thermal gravimetric analysis showed the excellent thermal stability of the Pt/CNOs and a lower onset potential for the electrochemical oxidation of methanol compared to that of commercial Pt/Vulcan catalyst material. The computational method confirmed the Pt atoms' location at CNOs surface sites. Geometric parameters for distances between Pt atoms in the 3Pt/CNOs molecular system from our theoretical calculations are in agreement with the respective parameters obtained experimentally. The combination of CNO with RoDSE presents a new highly dispersed catalyst nanomaterial.
- Published
- 2012
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39. Incorporation of an A1/A2-difunctionalized pillar[5]arene into a metal-organic framework.
- Author
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Strutt NL, Fairen-Jimenez D, Iehl J, Lalonde MB, Snurr RQ, Farha OK, Hupp JT, and Stoddart JF
- Abstract
An efficient synthetic route to an A1/A2-difunctionalized pillar[5]arene containing resolvable planar chirality has been developed and the arene employed as a strut in the synthesis of P5A-MOF-1, which has been demonstrated by X-ray powder diffraction analysis--supported by modeling--to be isoreticular with MOF-5. This metal-organic framework has an active domain that expresses good and selective uptake of neutral and positively charged electron-poor aromatic guests, which effect color changes of the cubic crystals from faint yellow to deep orange, arising from charge transfer between the guests and active domain of P5A-MOF-1.
- Published
- 2012
- Full Text
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40. Structural chemistry, monoclinic-to-orthorhombic phase transition, and CO2 adsorption behavior of the small pore scandium terephthalate, Sc2(O2CC6H4)CO2)3, and its nitro- and amino-functionalized derivatives.
- Author
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Mowat JP, Miller SR, Griffin JM, Seymour VR, Ashbrook SE, Thompson SP, Fairen-Jimenez D, Banu AM, Düren T, and Wright PA
- Abstract
The crystal structure of the small pore scandium terephthalate Sc(2)(O(2)CC(6)H(4)CO(2))(3) (hereafter Sc(2)BDC(3), BDC = 1,4-benzenedicarboxylate) has been investigated as a function of temperature and of functionalization, and its performance as an adsorbent for CO(2) has been examined. The structure of Sc(2)BDC(3) has been followed in vacuo over the temperature range 140 to 523 K by high resolution synchrotron X-ray powder diffraction, revealing a phase change at 225 K from monoclinic C2/c (low temperature) to Fddd (high temperature). The orthorhombic form shows negative thermal expansivity of 2.4 × 10(-5) K(-1): Rietveld analysis shows that this results largely from a decrease in the c axis, which is caused by carboxylate group rotation. (2)H wide-line and MAS NMR of deuterated Sc(2)BDC(3) indicates reorientation of phenyl groups via π flips at temperatures above 298 K. The same framework solid has also been prepared using monofunctionalized terephthalate linkers containing -NH(2) and -NO(2) groups. The structure of Sc(2)(NH(2)-BDC)(3) has been determined by Rietveld analysis of synchrotron powder diffraction at 100 and 298 K and found to be orthorhombic at both temperatures, whereas the structure of Sc(2)(NO(2)-BDC)(3) has been determined by single crystal diffraction at 298 K and Rietveld analysis of synchrotron powder diffraction at 100, 298, 373, and 473 K and is found to be monoclinic at all temperatures. Partial ordering of functional groups is observed in each structure. CO(2) adsorption at 196 and 273 K indicates that whereas Sc(2)BDC(3) has the largest capacity, Sc(2)(NH(2)-BDC)(3) shows the highest uptake at low partial pressure because of strong -NH(2)···CO(2) interactions. Remarkably, Sc(2)(NO(2)-BDC)(3) adsorbs 2.6 mmol CO(2) g(-1) at 196 K (P/P(0) = 0.5), suggesting that the -NO(2) groups are able to rotate to allow CO(2) molecules to diffuse along the narrow channels., (© 2011 American Chemical Society)
- Published
- 2011
- Full Text
- View/download PDF
41. Hydrogen uptake by {H[Mg(HCOO)3]⊃NHMe2}∞ and determination of its H2 adsorption sites through Monte Carlo simulations.
- Author
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Rossin A, Fairen-Jimenez D, Düren T, Giambastiani G, Peruzzini M, and Vitillo JG
- Abstract
A detailed analysis of the solvothermal synthesis in DMF of the polymeric magnesium formate {H[Mg(HCOO)(3)]⊃NHMe(2)}(∞) (1) from Mg(ClO(4))(2)·6H(2)O revealed that the final crystalline product is formed after an acid-catalyzed DMF hydrolysis, producing formic acid and dimethylamine. The former bridges magnesium(II) centers, creating the 3D scaffold, while the latter is trapped inside the cubic cavities of the polymer, engaging in strong hydrogen bonding with the formate ions of the cage. After thermal activation and guest removal, the material was tested for hydrogen uptake at T = 77 K over the 0-80 bar pressure range, and the existence of preferred H(2) adsorption sites was assessed through grand canonical Monte Carlo (GCMC) simulations. No specific low-energy site was found, and the H(2) molecules positions within the framework cavities are mainly dependent on packing effects. Thus, at low H(2) loadings the most populated site is the center of the cubic cavities, even though, at higher pressures, two more "localized" positions have been found by the simulation because of the reduced freedom of movement. The maximum experimental H(2) uptake corresponds to 8.8 mg/g or 13.5 mg/cm(3).
- Published
- 2011
- Full Text
- View/download PDF
42. Unusual adsorption behavior on metal-organic frameworks.
- Author
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Fairen-Jimenez D, Seaton NA, and Düren T
- Abstract
Metal-organic frameworks (MOFs) have shown adsorption behavior that is not observed in other microporous materials such as zeolites or activated carbons. This study used grand canonical Monte Carlo simulation to evaluate a particular form of behavior, which corresponds to the presence of unusual type V adsorption isotherms. Study of a series of MOFs in the IRMOF family, containing chemically similar linkers of different length, showed that the presence of type V adsorption depends on a fine balance between the strength of the fluid-fluid and fluid-solid interactions, which in turn is a strong function of the length of the linker and therefore the pore size. A transition from type V behavior to the more common type I behavior is observed as the temperature increases. The temperature at which this transition occurs increases, and the transition becomes more diffuse, as the length of the linker increases. This type V behavior leads to an interesting possibility in the design of MOF adsorbents for use in gas separation and gas storage applications.
- Published
- 2010
- Full Text
- View/download PDF
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