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The combination of vibrational spectroscopic techniques is used to study the structural information of interfacial proteins and peptides. The development of nonlinear vibrational spectroscopies has helped in understanding the structures and the functions of proteins and peptides at interfaces.

The structural changes of fibrinogen after adsorption to polystyrene (PS) is investigated at the PS/protein solution interface in situ using sum frequency generation (SFG) vibrational spectroscopy and attenuated total reflection Fourier transform infrared spectroscopy (ATR-FTIR). The research has indicated that the interactions between adsorbed fibrinogen and the PS surface can induce significant changes of protein secondary structures or global conformations.

A study to investigate the adsorption behavior of fibrinogen to two biomedical polyurethanes and a perfluorinated polymer was conducted. Investigation of fibrinogen adsorption revealed that fibrinogen binds and undergoes conformational changes that are highly dependent on the chemical properties of the surface.

A 'polarization mapping' method has been applied to improve the fitting quality of sum frequency generation (SFG) vibrational spectra of complicated systems and validate the data analysis of simple SFG spectra. Using such a method, two-dimensional SFG spectra can be constructed, from which more reliable spectral information can be obtained from a surface/interface. Model calculations as well as experiments have been employed to illustrate the power of the polarization mapping method for spectral analysis of SFG spectra. By using a deuterated polystyrene surface and interfacial protein molecules as examples, we demonstrate that this method is especially important for complicated molecules, such as polymers and proteins.

This study characterizes the molecular surface structures of polyurethane (PU) and plasticized PU films in air, in water, and in albumin solution in situ using a nonlinear optical technique, sum frequency generation (SFG) vibrational spectroscopy. Two different plasticizers are investigated: dioctyl sebacate (DOS) and o-nitrophenyl octyl ether (NPOE). Plasticization of PU is common for biosensors to achieve better adhesion, malleability, elasticity, and permeability; however, this can adversely affect biocompatibility. Our research indicates that plasticizers can segregate to the PU surface not only in air but also in water. In addition, plasticizer content can affect protein adsorption behaviors of PU surfaces. This is the first time surface-sensitive SFG has been applied to deduce plasticizer surface behavior in situ. More specifically, we found that DOS dominates the surface of the film with DOS surface concentrations higher than DOS bulk concentrations both in air and in contact with an aqueous environment. NPOE has a reduced effect at the surface compared to DOS in both air and aqueous environments. Addition of either DOS or NPOE to PU was also found to cause a change in albumin adsorption.

The protein adsorption on native oxide-covered polycrystalline Ti surfaces is analyzed using the sum frequency generation (SFG) vibrational spectroscopy. The SFG results suggest that structures of adsorbed protein molecules change during the adsorption process.

A manganese-catalyzed hydrogenation of esters has been accomplished with TONs up to 1000, using cheap, environmentally benign, potassium carbonate and simple alcohols as activator and solvent, respectively. The weakly basic conditions lead to good functional group tolerance and enable the hydrogenation of enantiomerically enriched α-chiral esters with essentially no loss of stereochemical integrity. [ABSTRACT FROM AUTHOR]

A "polarization mapping" method has been applied to improve the fitting quality of sum frequency generation (SFG) vibrational spectra of complicated systems and validate the data analysis of simple SFG spectra. Using such a method, two-dimensional SFG spectra can be constructed, from which more reliable spectral information can be obtained from a surface/interface. Model calculations as well as experiments have been employed to illustrate the power of the polarization mapping method for spectral analysis of SFG spectra. By using a deuterated polystyrene surface and interfacial protein molecules as examples, we demonstrate that this method is especially important for complicated molecules, such as polymers and proteins. [ABSTRACT FROM AUTHOR]

Quantitative techniques are essential to analyze the structure of soft multicomponent nanobioclusters. Here, we combine electrospray differential mobility analysis (ES-DMA), which rapidly measures the size of the entire cluster, with transmission electron microscopy (TEM), which detects the hard components, to determine the presence and composition of the softer components. Coupling analysis of TEM and ES-DMA derived data requires the creation and use of analytical models to determine the size and number of constituents in nanoparticle complexes from the difference between the two measurements. Previous ES-DMA analyses have been limited to clusters of identical spherical particles. Here, we dramatically extend the ES-DMA analysis framework to accommodate more challenging geometries, including protein corona-coated nanorods, clusters composed of heterogeneously sized nanospheres, and nanobioclusters composed of both nanospheres and nanorods. The latter is critical to determining the number of quantum dots attached to lambda (λ) phage, a key element of a rapid method to detect bacterial pathogens in environmental and clinical samples.

A multimodality imaging technique integrating atomic force, polarized Raman, and fluorescence lifetime microscopies, together with 2D autocorrelation image analysis is applied to the study of a mesoscopic heterostructure of nanoscale materials. This approach enables simultaneous measurement of fluorescence emission and Raman shifts from a quantum dot (QD)-single-wall carbon nanotube (SWCNT) complex. Nanoscale physical and optoelectronic characteristics are observed including local QD concentrations, orientation-dependent polarization anisotropy of the SWCNT Raman intensities, and charge transfer from photoexcited QDs to covalently conjugated SWCNTs. Our measurement approach bridges the properties observed in bulk and single nanotube studies. This methodology provides fundamental understanding of the charge and energy transfer between nanoscale materials in an assembly.

We demonstrate both theoretically and experimentally that the combination of vibrational spectroscopic techniques on samples can be used to deduce more detailed structural information of interfacial proteins and peptides. Such an approach can be used to elucidate structures of proteins or peptides at interfaces, such as at the solid/liquid interface or in cell membranes. We also discuss that the controlled perturbations may provide more measured parameters for structural studies on such proteins and peptides. In this paper, we will demonstrate that optical spectroscopic techniques such as polarized Fourier transform infrared spectroscopy (FTIR), sum frequency generation (SFG) vibrational spectroscopy, and higher order nonlinear vibrational spectroscopies can be used to deduce different and complementary structural information of molecules at interfaces (e.g., orientation information of certain functional groups and secondary structures of interfacial proteins). Also, we believe that controlled perturbations on samples, such as variation of sample temperature, application of electrical fields, and alternation of substrate roughness, can provide more detailed information regarding the interfacial structures of proteins and peptides. The development of nonlinear vibrational spectroscopies, such as SFG and four-wave mixing vibrational spectroscopy, to examine interfacial protein and peptide structures, and introduction of external perturbations on samples should be able to substantially advance our knowledge in understanding structures and thus functions of proteins and peptides at interfaces.

Sum frequency generation (SFG) vibrational spectroscopy has been successfully applied to study molecular structures of several poly(n-alkyl methacrylate)s (PAMAs) with different side chain lengths at the PAMA/air and PAMA/water interfaces. We have observed that the ester side chains from all PAMAs always dominate the interface, but the orientation information of the methyl end group on the side chains varies, depending on the length of the side chain. The contributions from methylene groups on the side chains have been evaluated, and the surface structures have been related to the surface tension of these polymers. Different water restructuring behaviors have been observed for different PAMAs. This phenomenon and its reversibility are strongly dependent on the glass transition temperature of each polymer, which is influenced by the side chain length. Detailed data fitting and analysis has been discussed.

Surface side-chain orientation changes of two polymers have been observed upon protein adsorption using sum frequency generation vibrational spectroscopy. Side-chain-deuterated poly(ethyl methacrylate) and poly(n-butyl methacrylate) were contacted with five protein solutions: albumin, fibrinogen, ubiquitin, cytochrome c, and lysozyme. The CD(3)/CD(2) symmetric stretch ratios of the surface polymer side chains in contact with these different media were compared to each other and to that of the polymer contacting air or phosphate buffered saline. The adsorption of different proteins to the surfaces resulted in polymer side-chain orientations slightly different from each other, with orientations between the air and buffer cases.

Structural changes of fibrinogen after adsorption to polystyrene (PS) were examined at the PS/protein solution interface in situ using sum frequency generation (SFG) vibrational spectroscopy and attenuated total reflection Fourier transform infrared spectroscopy (ATR-FTIR). Different behaviors of hydrophobic side chains and secondary structures of adsorbed fibrinogen molecules have been observed. Our results indicate that upon adsorption, the hydrophobic PS surface induces fast structural changes of fibrinogen molecules by aligning some hydrophobic side chains in fibrinogen so that they face to the surface. Such structural changes of fibrinogen hydrophobic side chains are local changes and do not immediately induce significant changes of the protein secondary structures. Our research also shows that the interactions between adsorbed fibrinogen and the PS surface can induce significant changes of protein secondary structures or global conformations which occur on a much longer time scale.