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Sea cucumbers are benthic marine invertebrate members of the phylum Echinodermata. Due to the absence of a rigid skeleton, these species have developed chemical defenses based on the production of saponins (triterpene glycosides). These secondary metabolites are bioactive molecules with a broad biological, ecological, and pharmaceutical spectrum. However, the saponin profiles of several species of sea cucumbers are not known yet. The present study aims to highlight the mixture of saponins in two sea cucumber species from the Algerian coast, namely Holothuria (Holothuria) algeriensis, which has been recently described in central and western Algerian waters, and Holothuria (Roweothuria) arguinensis, originating from the Atlantic Ocean and reported in Algeria for the first time in 2014. Saponin extracts from three individuals of H. (H.) algeriensis and two individuals of H. (R.) arguinensis were analyzed using mass spectrometry, i.e., Matrix-assisted Laser Desorption/Ionization mass spectrometry (MALDI-MS), MALDI-High Resolution MS (MALDI-HRMS), Liquid Chromatography MS (LC-MS) and tandem MS (LC-MS/MS). These analyses allow us to detect 11 and 18 elemental compositions for H. (H.) algeriensis and H. (R.) arguinensis, respectively, each presenting several isomers. In total, 13 new saponin structures are proposed, of which four are common between the two species, six are specific to H. (H.) algeriensis and three to H. (R.) arguinensis. The saponin profiles of the two species were compared to those of other species of the same genus existing on the Algerian coast and the results showed that they share non-sulfated saponins with Holothuria (Panningothuria) forskali and Holothuria (Platyperona) sanctori and sulfated saponins with Holothuria (Holothuria) tubulosa and Holothuria (Roweothuria) poli. [ABSTRACT FROM AUTHOR]

Eulimidae is a prominent group within the class Gastropoda, comprising 1087 species that have developed specialised symbiotic relationships with all extant echinoderm classes. At least 47 species of eulimids can be found in the waters of Vietnam. Representatives of the genus Pulicicochlea, the species Vitreobalcis tripneusticola, and four new undescribed species were observed for the first time. In this study, we update the existing checklists of Vietnamese eulimids, emphasising the use of molecular barcoding to determine the phylogenetic relationships among the collected species. The classical taxonomy of molluscs relies heavily on the morphology of the shell and radula. The family Eulimidae presents challenges as in many species these features are poorly developed, and molecular phylogenetic methods have proven to be more informative for the taxonomy and systematics of this family. To understand the evolutionary pathways in Eulimidae, we constructed a COI-based phylogenetic tree, which included original sequences primarily from Vietnam and all available sequences for Eulimidae from GenBank. The newly obtained genetic information is crucial for enhancing our understanding of this family of gastropod mollusсs, as well as for any future revisions that may be necessary. [ABSTRACT FROM AUTHOR]

The Pliensbachian (Lower Jurassic) age-based Lower Marly Limestone Formation of the Moulay Idriss Zerhoun area (Morocco) and the Ain Ouarka Formation of the Ksour Mountains (Algeria) have yielded rare crinoids. Although crinoids have previously been described from the Jurassic of Algeria, their Pliensbachian occurrence is being reported here for the first time. On the other hand, one isocrinid taxa [Terocrinus subsulcatus (Münster in Goldfuss)] was also recorded from the Pliensbachian strata of Morocco. Additionally, now, from both Morocco and Algeria, Seirocrinus subangularis (Miller), belonging to the family Pentacrinitidae, is documented. This is a cosmopolitan and pseudoplaktonic crinoid species that is well-known from Asia, Europe, and North America. The taxonomic evaluation of the genus Seirocrinus is provided. The present records from Algeria and Morocco are the first finds of Seirocrinus from the African continent. Ticinocrinus moroccoensis sp. nov. represented by a cup of a rare cyrtocrinid (Cyrtocrinida) is associated with S. subangularis from Morocco. Globally, this is the second record of the genus; the first Ticinocrinus being described from the Pliensbachian of Switzerland. Thus, the present records from Morocco and Algeria are also the oldest cyrtocrinids from the southern margin of the Tethys. [ABSTRACT FROM AUTHOR]

A representative complex of the Turonian-Santonian carbonate-producing invertebrates has been revealed. It comprised benthic foraminifers, diverse echinoderms, brachiopods, calcareous and siliceous sponges.

Abstract The predation-driven Mesozoic marine revolution (MMR) is believed to have induced a dramatic change in the bathymetric distribution of many shallow marine invertebrates since the late Mesozoic. For instance, stalked crinoids – isocrinids (Isocrinida) have undergone a striking decline in shallow-sea environments and today they are restricted to deep-sea settings (below 100 m depth). However, the timing and synchronicity of this shift are a matter of debate. A delayed onset of MMR and/or shifts to a retrograde, low-predation community structure during the Paleogene in the Southern Ocean were invoked. In particular, recent data from the Southern Hemisphere suggest that the environmental restriction of isocrinids to the deep-sea settings may have occurred at the end of the Eocene around Antarctica and Australia, and later in the early Miocene in New Zealand. Here, we report the anomalous occurrence of the isocrinids in shallow nearshore marine facies from the middle Miocene of Poland (Northern Hemisphere, Central Paratethys). Thus, globally, this is the youngest record of shallow-sea stalked crinoids. This finding suggests that some relict stalked crinoids may have been able to live in the shallow-water environments by the middle Miocene, and further confirms that the depth restriction of isocrinids to offshore environments was not synchronous on a global scale.

In many countries, such as Norway, there are vast quantities of sea urchins that have formed barrens over large areas of the coastline. Research has shown that removal of sufficient quantities of sea urchins from these barrens can lead to them reverting to a macroalgae forest. Identifying the chemical composition of sea urchins for various uses, such as agricultural fertiliser, would incentivise this sea urchin removal. This study investigates the composition of sea urchins and whether the composition varies when sea urchin collection sites vary both geographically and temporally. Sea urchins were collected from three sites within 10 km of each other in northern Norway at three times through the year. The sea urchins were dried, crushed, powdered, and analysed for nutrient content. An elemental analysis from the sea urchin samples showed high calcium and relatively high magnesium levels; smaller relative quantities of nitrogen, phosphorous, and potassium were also found. Micronutrients such as iron (Fe), zinc (Zn), manganese (Mn), and copper (Cu) were found. More importantly, both primary, macro-, and micronutrients showed high variability when collected from different sites and at different times of the year. This will be a critical consideration when investigating the use of this product as a plant fertiliser or for any other use. [ABSTRACT FROM AUTHOR]

The predation-driven Mesozoic marine revolution (MMR) is believed to have induced a dramatic change in the bathymetric distribution of many shallow marine invertebrates since the late Mesozoic. For instance, stalked crinoids – isocrinids (Isocrinida) have undergone a striking decline in shallow-sea environments and today they are restricted to deep-sea settings (below 100 m depth). However, the timing and synchronicity of this shift are a matter of debate. A delayed onset of MMR and/or shifts to a retrograde, low-predation community structure during the Paleogene in the Southern Ocean were invoked. In particular, recent data from the Southern Hemisphere suggest that the environmental restriction of isocrinids to the deep-sea settings may have occurred at the end of the Eocene around Antarctica and Australia, and later in the early Miocene in New Zealand. Here, we report the anomalous occurrence of the isocrinids in shallow nearshore marine facies from the middle Miocene of Poland (Northern Hemisphere, Central Paratethys). Thus, globally, this is the youngest record of shallow-sea stalked crinoids. This finding suggests that some relict stalked crinoids may have been able to live in the shallow-water environments by the middle Miocene, and further confirms that the depth restriction of isocrinids to offshore environments was not synchronous on a global scale. [ABSTRACT FROM AUTHOR]

Crinoids of the Order Comatulida are renowned for harboring a remarkable diversity of symbiotic organisms within echinoderms, including polychaetes, myzostomids, gastropods, crustaceans, brittle stars, or fish. Crinoids provide essential services to their symbionts, such as shelter, access to food resources, mating areas, nesting grounds, and nurseries. Symbionts within crinoids developed a variety of strategies, including foraging in the arm ambulacral grooves, preying upon other symbionts, living within galls, or accessing suspended food particles from the water column. In this work, we focused on the Great Reef of Toliara, where we collected specimens from seven crinoid species. Among the 84 crinoids examined, a total of 285 symbiotic organisms were retrieved. These symbionts were either moving freely on their host or found within cysts. Stable isotope analyses of carbon and nitrogen for both hosts and symbionts have shown that (a) all crinoids shared a common trophic niche; (b) a community-based approach indicated that crinoids initiated trophic networks primarily based on suspended particulate organic matter; (c) non-specific symbionts exhibited consistent dietary preferences regardless of their host; (d) myzostomids inhabiting cysts were found to feed on their host tissues; and (e) free-moving symbionts displayed divergent trophic niches linked to their predatory, kleptoparasitic, or filter-feeding behaviors. This research underscores the role of crinoids, particularly comatulid species, as key components of tropical ecosystems in the Western Indian Ocean, inhabited by a hidden biodiversity with complex trophic networks. Their intricate morphology accommodates a range of feeding strategies, supporting a diverse associated fauna. [ABSTRACT FROM AUTHOR]

Abstract Studies of morphology and developmental patterning in adult stages of many invertebrates are hindered by opaque structures, such as shells, skeletal elements, and pigment granules that block or refract light and necessitate sectioning for observation of internal features. An inherent challenge in studies relying on surgical approaches is that cutting tissue is semi-destructive, and delicate structures, such as axonal processes within neural networks, are computationally challenging to reconstruct once disrupted. To address this problem, we developed See-Star, a hydrogel-based tissue clearing protocol to render the bodies of opaque and calcified invertebrates optically transparent while preserving their anatomy in an unperturbed state, facilitating molecular labeling and observation of intact organ systems. The resulting protocol can clear large (> 1 cm3) specimens to enable deep-tissue imaging, and is compatible with molecular techniques, such as immunohistochemistry and in situ hybridization to visualize protein and mRNA localization. To test the utility of this method, we performed a whole-mount imaging study of intact nervous systems in juvenile echinoderms and molluscs and demonstrate that See-Star allows for comparative studies to be extended far into development, facilitating insights into the anatomy of juveniles and adults that are usually not amenable to whole-mount imaging.

In May 2023, oceanic and atmospheric anomalies indicated El Niño conditions in the eastern Pacific, followed by coral bleaching in coral communities and reefs of Huatulco. We conducted surveys and sampled coral reef communities from late June to mid–August of 2023 to evaluate the intensity and extent of the changes associated with the warming event. From January of 2023, Huatulco experienced positive sea surface temperature (SST) anomalies; however, beginning in June, the high-temperature anomalies became extreme (>31 °C; ~2 °C above historical records). These high temperatures resulted in extensive coral bleaching in middle–late June and mortality from middle–late July (>50–93%). In addition, the area experienced significant reductions in echinoderm abundance and fish biomass. In 2023, severe bleaching affected coral systems in the Central Mexican Pacific, Gulf of Mexico, and Mexican Caribbean, making this the most devastating marine heatwave event, simultaneously impacting coral reefs across Mexico’s Pacific and Atlantic coasts.

Studies of morphology and developmental patterning in adult stages of many invertebrates are hindered by opaque structures, such as shells, skeletal elements, and pigment granules that block or refract light and necessitate sectioning for observation of internal features. An inherent challenge in studies relying on surgical approaches is that cutting tissue is semi-destructive, and delicate structures, such as axonal processes within neural networks, are computationally challenging to reconstruct once disrupted. To address this problem, we developed See-Star, a hydrogel-based tissue clearing protocol to render the bodies of opaque and calcified invertebrates optically transparent while preserving their anatomy in an unperturbed state, facilitating molecular labeling and observation of intact organ systems. The resulting protocol can clear large (> 1 cm3) specimens to enable deep-tissue imaging, and is compatible with molecular techniques, such as immunohistochemistry and in situ hybridization to visualize protein and mRNA localization. To test the utility of this method, we performed a whole-mount imaging study of intact nervous systems in juvenile echinoderms and molluscs and demonstrate that See-Star allows for comparative studies to be extended far into development, facilitating insights into the anatomy of juveniles and adults that are usually not amenable to whole-mount imaging. [ABSTRACT FROM AUTHOR]

To explore animal diversity, new experimentally tractable organisms must be established. Echinoderms include five groups of marine animals that have been used as developmental models for over a century thanks to their low costs, high fecundity, optically clear larvae and genetic tractability. An additional advantage of echinoderms is that their larval forms display diverse morphologies. This rich diversity enables comparative studies to investigate the evolutionary relationships among cell types, tissues, and organs. However, reproducible protocols to obtain gametes, detailed information on embryogenesis, and genomic tools have been optimized only for selected species of sea urchins and sea stars. To address this gap, we established the abundant Mediterranean sea cucumber Holothuria tubulosa as a new experimental system. Here we describe a method to reliably obtain gametes and make embryonic cultures multiple times from the same animal and characterize unique larval tissues combining immunohistochemistry and high-resolution microscopy. This work represents a step forward in our understanding of holothurian development and establishes H. tubulosa as an emerging experimental system for evo-devo and other biological disciplines. [ABSTRACT FROM AUTHOR]

In this catalogue, 80 species of ophiuroids collected by the IN2021_V04 and IN2022_V08 expeditions to the Australian Christmas Island and Cocos (Keeling) Islands Territories are described and illustrated. [ABSTRACT FROM AUTHOR]

• Sahune (Oxfordian, Late Jurassic) in south-eastern France Basin is newly described. • Carbonate bodies enclosed within Terres Noires Formation formed at cold seeps. • Associated fauna indicate seepage at bathyal depth ca. 1.500 m. • Several seep ostracod families have evolved at seeps since the Oxfordian. • Colonization of bathyal environments occurred earlier than thought. Hydrocarbon seeps represent some of the most extreme marine habitats but are also home to rich communities developed around chemosynthesis rather than photosynthesis. Here we describe the outcrop of Sahune (Drôme department, south-eastern France), that illustrates a new seeping site during the Late Jurassic (middle Oxfordian), as formally demonstrated by geochemical proxies. We report the associated fauna composed of foraminifers, radiolarians, crinoids, echinoids and ostracods that all point to seepage at bathyal depth. The foraminifer assemblage and the occurrence of the irregular echinoid Tithonia oxfordiana together point to a middle Oxfordian age. We provide an in-depth analysis of the ostracod community, which is the oldest so far reported in such environments. The new species Procytherura praecoquum may be cognate to the seepage site and could illustrate the oldest known example of pore clusters, sometimes proposed as representing ectosymbiosis. The Sahune assemblage demonstrates that cold seep ostracod communities were already a mixture of taxa from platform and deep-sea oligotrophic environments. The post-Jurassic diversification of ostracods at cold seeps was related to colonization events and diversification of families that have been inhabitants of such ecosystems at least since the Oxfordian. The Sahune record changes our current conception of the deep-sea colonization by the ostracods Tethysia and Procytherura that occurred earlier than traditionally considered. [ABSTRACT FROM AUTHOR]

The commercial importance of benthic macroinvertebrates like echinoderms and molluscs has led to the overexploitation of wild stocks in many areas around the Philippines. Despite their ecological and economic importance, studies on the status of wild populations of commercial macroinvertebrates in unexploited habitats such as marine protected areas (MPAs) are very scarce. The diversity and abundance of commercially valuable echinoderms and molluscs in the seagrass and reefs of Danjugan Island Marine Reserve were assessed. Shallow areas (1-3 m depth) around the island were surveyed both during the day and after dusk using belt transects. A total of 226 individuals belonging to 21 different taxa were recorded during the surveys, of which 71% were molluscs and 29% were echinoderms. In the seagrass habitat, Cypraeidae, Toxopneustidae, and Conidae were the dominant families, while molluscs from the Cardiidae family comprised more than half of the total assemblage in the reef flat. The most diverse commercial macroinvertebrate group was Holothuriidae with five different species. The densities of the families were higher during dusk than during the day in both habitats, except for Cardiidae in the seagrass. The highest values of species richness and H' index were observed during dusk surveys in the reef habitat (H'= 1.57), while the lowest was observed in seagrass areas during morning surveys (H'= 1.37). This is the first study that assessed commercially valuable macroinvertebrates during day and night in two connected habitats within a protected area. The differences in diversity and abundance in each habitat depending on the time of day highlight the importance of considering these factors when evaluating macroinvertebrate populations in unexploited areas. [ABSTRACT FROM AUTHOR]

A growing number of recent studies have demonstrated that introgression is common across the tree of life. However, we still have a limited understanding of the fate and fitness consequence of introgressed variation at the whole-genome scale across diverse taxonomic groups. Here, we implemented a phylogenetic hidden Markov model to identify and characterize introgressed genomic regions in a pair of well-diverged, nonsister sea urchin species: Strongylocentrotus pallidus and Strongylocentrotus droebachiensis. Despite the old age of introgression, a sizable fraction of the genome (1% to 5%) exhibited introgressed ancestry, including numerous genes showing signals of historical positive selection that may represent cases of adaptive introgression. One striking result was the overrepresentation of hyalin genes in the identified introgressed regions despite observing considerable overall evidence of selection against introgression. There was a negative correlation between introgression and chromosome gene density, and two chromosomes were observed with considerably reduced introgression. Relative to the nonintrogressed genome-wide background, introgressed regions had significantly reduced nucleotide divergence (d XY) and overlapped fewer protein-coding genes, coding bases, and genes with a history of positive selection. Additionally, genes residing within introgressed regions showed slower rates of evolution (d N, d S, d N/ d S) than random samples of genes without introgressed ancestry. Overall, our findings are consistent with widespread selection against introgressed ancestry across the genome and suggest that slowly evolving, low-divergence genomic regions are more likely to move between species and avoid negative selection following hybridization and introgression. [ABSTRACT FROM AUTHOR]

In May 2023, oceanic and atmospheric anomalies indicated El Niño conditions in the eastern Pacific, followed by coral bleaching in coral communities and reefs of Huatulco. We conducted surveys and sampled coral reef communities from late June to mid–August of 2023 to evaluate the intensity and extent of the changes associated with the warming event. From January of 2023, Huatulco experienced positive sea surface temperature (SST) anomalies; however, beginning in June, the high-temperature anomalies became extreme (>31 °C; ~2 °C above historical records). These high temperatures resulted in extensive coral bleaching in middle–late June and mortality from middle–late July (>50–93%). In addition, the area experienced significant reductions in echinoderm abundance and fish biomass. In 2023, severe bleaching affected coral systems in the Central Mexican Pacific, Gulf of Mexico, and Mexican Caribbean, making this the most devastating marine heatwave event, simultaneously impacting coral reefs across Mexico's Pacific and Atlantic coasts. [ABSTRACT FROM AUTHOR]

Metabarcoding is revolutionising the analysis of biodiversity in marine ecosystems, especially as it provides a means of detecting and identifying cryptic life stages in field samples. The planktonic larval stage of many species underpins the abundance and distribution of adult populations but is challenging to characterise given the small size of larvae and diffuse distributions in pelagic waters. Yet, planktonic larval dynamics are key to understanding phenomena observed in adult populations, such as the boom-and-bust dynamics exhibited by some echinoderms. Rapid changes in echinoderm population density can have significant effects on local benthic ecosystems. For example, outbreaks of the crown-of-thorns sea star (CoTS) on the Great Barrier Reef (GBR) have led to considerable declines in coral cover. Here, we used a DNA metabarcoding approach to investigate the spatio-temporal distribution and diversity of echinoderm larvae on the GBR, including CoTS. Generalised linear mixed models revealed that echinoderm larval richness, was significantly correlated with temporal variables (i.e. season and year) which is consistent with expected fluctuations in larval output based on adult spawning periodicity. However, neither site-specific differences in echinoderm larval richness, nor correlations between larval composition and environmental, temporal, or spatial variables were found. This study validates the utility of metabarcoding approaches for detecting and characterising echinoderm larvae, including CoTS, which could prove useful to future monitoring efforts. Our findings suggest that metabarcoding can be used to better understand the life history of planktonic larvae, and analyses combining environmental (e.g., temperature, nutrients) and oceanographic (e.g., currents) data could deliver valuable information on the factors influencing their spatio-temporal distributions. [ABSTRACT FROM AUTHOR]

Many animals have pigments when they themselves cannot see colour. Perhaps those pigments enable the animal to avoid predators, or to attract mates. Maybe even those pigmented surfaces are hosts for microbes, even when the microbes do not see colour. Do some pigments then serve as a chemical signal for a good or bad microbial substrate? Maybe pigments attract or repel various microbe types? Echinoderms serve as an important model to test the mechanisms of pigment-based microbial interactions. Echinoderms are marine benthic organisms, ranging from intertidal habitats to depths of thousands of metres and are exposed to large varieties of microbes. They are also highly pigmented, with a diverse variety of colours between and even within species. Here we focus on one type of pigment (naphthoquinones) made by polyketide synthase, modified by flavin-dependent monoxygenases, and on one type of function, microbial interaction. Recent successes in targeted gene inactivation by CRISPR/Cas9 in sea urchins supports the contention that colour is more than it seems. Here we dissect the players, and their interactions to better understand how such host factors influence a microbial colonization. This article is part of the theme issue 'Sculpting the microbiome: how host factors determine and respond to microbial colonization'. [ABSTRACT FROM AUTHOR]

In this catalogue, the 17 species of echinoids collected by the IN2021_V04 and IN2022_V08 expeditions to the Australian Christmas Island and Cocos (Keeling) Islands Territories are described and illustrated. Ashley Miskelly. 2024. Catalogue of the Echinoidea (sea urchins, phylum Echinodermata) collected by the IN2021_V04 and IN2022_V08 expeditions to the Australian Christmas Island and Cocos (Keeling) Islands Territories. [ABSTRACT FROM AUTHOR]

Echinoderms are a major group (phylum) of invertebrate animals with a rich fossil record stretching back to the Cambrian period, approximately 518 million years ago. While all modern species are characterized by pentaradial (i.e., fivefold) symmetry, Cambrian echinoderms also include taxa with different types of symmetry (e.g., bilateral symmetry). These distinct forms were present from very early in the phylum's history, demonstrating that the initial diversification of echinoderm body plans was extremely rapid. The phylogenetic relationships of Cambrian echinoderms have long been debated, hindering efforts to reconstruct the evolution of the phylum, but recent analyses have consistently recovered bilaterally symmetrical forms as the earliest-diverging echinoderms. This reveals the sequence of character acquisition in echinoderm evolution, indicating that radial symmetry is a derived character of the group, which evolved after the acquisition of a mineralized skeleton. Cambrian echinoderms were adapted to diverse modes of life, with ecology an important factor shaping their early evolution. However, the reasons why echinoderms evolved their unique pentaradial body plan remain unclear. The Cambrian fossil record provides valuable insights into the origin and early evolution of echinoderms over half a billion years ago. Cambrian echinoderms were morphologically diverse, with several extinct groups exhibiting character combinations that distinguish them from living species. Phylogenetic analyses of bilateral, asymmetrical, triradial, and pentaradial fossils have allowed us to decipher the assembly of the modern echinoderm body plan. Echinoderms became ecologically diverse early in their history, with varied modes of feeding, locomotion, and attachment. [ABSTRACT FROM AUTHOR]

In this catalogue, 30 species from 25 genera and 11 families, of Asteroidea collected by the IN2021_;V04 and IN2022_;V08 expeditions to the Australian Christmas Island and Cocos (Keeling) Islands Territories are described and illustrated. [ABSTRACT FROM AUTHOR]

Sea cucumbers are benthic marine invertebrate members of the phylum Echinodermata. Due to the absence of a rigid skeleton, these species have developed chemical defenses based on the production of saponins (triterpene glycosides). These secondary metabolites are bioactive molecules with a broad biological, ecological, and pharmaceutical spectrum. However, the saponin profiles of several species of sea cucumbers are not known yet. The present study aims to highlight the mixture of saponins in two sea cucumber species from the Algerian coast, namely Holothuria (Holothuria) algeriensis, which has been recently described in central and western Algerian waters, and Holothuria (Roweothuria) arguinensis, originating from the Atlantic Ocean and reported in Algeria for the first time in 2014. Saponin extracts from three individuals of H. (H.) algeriensis and two individuals of H. (R.) arguinensis were analyzed using mass spectrometry, i.e., Matrix-assisted Laser Desorption/Ionization mass spectrometry (MALDI-MS), MALDI-High Resolution MS (MALDI-HRMS), Liquid Chromatography MS (LC-MS) and tandem MS (LC-MS/MS). These analyses allow us to detect 11 and 18 elemental compositions for H. (H.) algeriensis and H. (R.) arguinensis, respectively, each presenting several isomers. In total, 13 new saponin structures are proposed, of which four are common between the two species, six are specific to H. (H.) algeriensis and three to H. (R.) arguinensis. The saponin profiles of the two species were compared to those of other species of the same genus existing on the Algerian coast and the results showed that they share non-sulfated saponins with Holothuria (Panningothuria) forskali and Holothuria (Platyperona) sanctori and sulfated saponins with Holothuria (Holothuria) tubulosa and Holothuria (Roweothuria) poli.

Three new bibenzochromenones named phanogracilins A–C (1–3) were isolated from the crinoid Phanogenia gracilis. The structure of 1 was established using X-ray crystallography as 5,5′,6,6′,8,8′-hexahydroxy-2,2′-dipropyl-4H,4′H-[7,9′-bibenzo[g]chromene]-4,4′-dione. This allowed us to assign reliably 2D NMR signals for compound 1 and subsequently for its isomer 2 that differed in the connecting position of two benzochromenone moieties (7,10′ instead of 7,9′), and compound for 3 that differed in the length of the aliphatic chain of one of the fragments. Compound 4 was derived from 1 in alkaline conditions, and its structure was elucidated as 5,5′,6′,8,8′-pentahydroxy-2,2′-dipropyl-4H,4′H-[7,9′-bibenzo[g]chromene]-4,4′,6,9-tetraone. Even though compounds 1–4 did not contain stereo centers, they possessed notable optical activity due to sterical hindrances, which limited the internal rotation of two benzochromenone fragments around C(7)–C(9′/10′) bonds. Isolated bibenzochromenones 1–4 were tested for their antiradical, neuroprotective and antimicrobial activities. Compounds 1, 3 and 4 demonstrated significant antiradical properties towards ABTS radicals higher than the positive control trolox. Compounds 1 and 4 exhibited moderate neuroprotective activity, increasing the viability of rotenone-treated Neuro-2a cells at a concentration of 1 µM by 9.8% and 11.8%, respectively. Compounds 1 and 3 at concentrations from 25 to 100 μM dose-dependently inhibited the growth of Gram-positive bacteria S. aureus and yeast-like fungi C. albicans, and they also prevented the formation of their biofilms. Compounds 2 and 4 exhibited low antimicrobial activity. [ABSTRACT FROM AUTHOR]

Introduction: Short-term gametes storage is an inexpensive and simple technique that allows the use of the same batch of eggs or sperm at different times, maximizing the application of research protocols and the use of gametes in production. Arbacia dufresnii is a sea urchin species with proven aquaculture potential and already used in the nutraceutical industry. Aging of its gametes is unknown and is a needed information to scale up the production. Objective: Determine the effect of male and female gamete aging on the fertilization success of Arbacia dufresnii. This will allow optimizing the use of gametes after collection decoupling spawning from fertilization. Methods: A. dufresnii individuals were induced to spawn and gametes were kept at 12 ± 1 °C throughout each bioassay. Sperm was separated into two treatments: activated sperm in seawater (AS), and dry sperm (DS). Two bioassays were made: Bioassay 1 evaluated the effect of time on fertility by performing fertilization tests at 0 h, 24 h, 48 h, 72 h, and 96 h after spawning. Bioassay 2 evaluated the contribution of each type of aged gamete on fertility, combining aged gametes (96 h) with fresh gametes (0 h). Results: Bioassay 1: the fertilization success obtained by combining eggs (E) with AS or DS presented important differences. While the fertilization success remained acceptable (greater than 50 %) for up to 72 h using ExDS, it only remained acceptable for up to 48 h using ExAS. Bioassay 2: acceptable fertilization success was found by combining aged E (96 h) with fresh sperm, or aged DS (96 h) with fresh E, but not using aged AS with fresh E. Conclusions: The findings of this work show that fertilization success in A. dufresnii gametes remains relatively unchanged for up to 48 h after spawning when combining ExAS, and for up to 72 h when combining ExDS. However, when combining aged E or aged DS with a fresh gamete, post-collection fertilization can be extended up to 96 h. In this work, the first steps have been taken to understand the conservation time of A. dufresnii gametes with minimum intervention. [ABSTRACT FROM AUTHOR]

Introduction: Echinoderms, an integral component of marine ecosystems worldwide, have captivated scientific interest for centuries. Despite this longstanding attention, comprehending key facets such as trophic relationships, diet composition, and host-microbiota relationships still represents a challenge using traditional techniques. Recent years, however, have witnessed a transformative shift, thanks to the emergence of advanced molecular techniques, offering new approaches to strengthen ecological studies in echinoderms. Objective: Explore how recent advancements in molecular tools have impacted ecological research on echinoderms. Specifically, we aim to investigate the potential of these tools to shed light on trophic interactions, diet composition, and the characterization of gut microbial communities in these organisms. Methods: Available literature was used to clarify how novel molecular techniques can improve ecological studies. The focus is diet, trophic relationships, and gut microbiota. Results: Traditionally, studies of stomach contents using compound microscopy have provided an idea of ingested material; nevertheless, sometimes a simple magnified visualization of dietary content does not allow exhaustive identification of the entire food spectrum, as it is limited due to the rapid digestion and maceration of food items within the echinoderm's digestive tract. The use of DNA-metabarcoding, targeting specific DNA regions, such as the mitochondrial COI gene, has allowed us to enhance the accuracy and precision of diet characterization by enabling the identification of prey items down to the species or even genetic variant level, providing valuable insights into specific dietary preferences. Another approach is the use of stable isotopes, particularly carbon and nitrogen, which provide a powerful tool to trace the origin and flow of nutrients through food webs. By analyzing the isotopic signatures in muscular tissues and food items, we can discern the sources of their primary food items and gain insights into their trophic position within the ecosystem. Lastly, a third new technique used to elucidate the characterization of the prokaryotic community is 16S rRNA sequencing. This method allows us to explore the composition and dynamics of the digestive tract microbial communities. Conclusions: This is a promising era for ecological research on echinoderms, where advances of molecular tools have enabled an unprecedented level of detail, resolving longstanding challenges in comprehending their trophic interactions, diet composition, and host-microbiota relationships, and opening new avenues of investigation in ecological studies. [ABSTRACT FROM AUTHOR]

To explore animal diversity, new experimentally tractable organisms must be established. Echinoderms include five groups of marine animals that have been used as developmental models for over a century thanks to their low costs, high fecundity, optically clear larvae and genetic tractability. An additional advantage of echinoderms is that their larval forms display diverse morphologies. This rich diversity enables comparative studies to investigate the evolutionary relationships among cell types, tissues, and organs. However, reproducible protocols to obtain gametes, detailed information on embryogenesis, and genomic tools have been optimized only for selected species of sea urchins and sea stars. To address this gap, we established the abundant Mediterranean sea cucumber Holothuria tubulosa as a new experimental system. Here we describe a method to reliably obtain gametes and make embryonic cultures multiple times from the same animal and characterize unique larval tissues combining immunohistochemistry and high-resolution microscopy. This work represents a step forward in our understanding of holothurian development and establishes H. tubulosa as an emerging experimental system for evo-devo and other biological disciplines.

Three new bibenzochromenones named phanogracilins A–C (1–3) were isolated from the crinoid Phanogenia gracilis. The structure of 1 was established using X-ray crystallography as 5,5′,6,6′,8,8′-hexahydroxy-2,2′-dipropyl-4H,4′H-[7,9′-bibenzo[g]chromene]-4,4′-dione. This allowed us to assign reliably 2D NMR signals for compound 1 and subsequently for its isomer 2 that differed in the connecting position of two benzochromenone moieties (7,10′ instead of 7,9′), and compound for 3 that differed in the length of the aliphatic chain of one of the fragments. Compound 4 was derived from 1 in alkaline conditions, and its structure was elucidated as 5,5′,6′,8,8′-pentahydroxy-2,2′-dipropyl-4H,4′H-[7,9′-bibenzo[g]chromene]-4,4′,6,9-tetraone. Even though compounds 1–4 did not contain stereo centers, they possessed notable optical activity due to sterical hindrances, which limited the internal rotation of two benzochromenone fragments around C(7)–C(9′/10′) bonds. Isolated bibenzochromenones 1–4 were tested for their antiradical, neuroprotective and antimicrobial activities. Compounds 1, 3 and 4 demonstrated significant antiradical properties towards ABTS radicals higher than the positive control trolox. Compounds 1 and 4 exhibited moderate neuroprotective activity, increasing the viability of rotenone-treated Neuro-2a cells at a concentration of 1 µM by 9.8% and 11.8%, respectively. Compounds 1 and 3 at concentrations from 25 to 100 μM dose-dependently inhibited the growth of Gram-positive bacteria S. aureus and yeast-like fungi C. albicans, and they also prevented the formation of their biofilms. Compounds 2 and 4 exhibited low antimicrobial activity.

Neuropeptides are small molecules that mediate intercellular signaling and regulate physiological processes. Starfish possess various myoactive neuropeptides, including starfish myorelaxant peptide (SMP) and a calcitonin-type peptide with apical muscle relaxing properties. In this study, we report the purification of a neuropeptide from starfish (Patiria pectinifera) pyloric caeca extract using high-performance liquid chromatography (HPLC) and an in vitro bioassay to screen for fractions and peptides with relaxing effects on P. pectinifera apical muscle preparations. A series of HPLC steps using reversed-phase and cation-exchange columns yielded a purified peptide with muscle-relaxing effects. The purified peptide's structure was determined by LC-MS and Edman degradation, revealing a pentapeptide with an amidated C-terminus (NGFFYamide) and a molecular mass of 646.2930 Da. This is the first report of NGFFYamide purification from P. pectinifera through biochemical methods. The nucleotide sequence encoding the NGFFYamide precursor was determined, showing the presence of a conserved neurophysin domain in the C-terminal region. RT-qPCR results confirmed high expression in radial nerves cord, consistent with previous findings on NG peptides in echinoderms. In vitro pharmacological studies on muscle preparations from P. pectinifera and Asterias amurensis revealed differential relaxing activity of NGFFYamide on apical muscles, while its effects on tube foot preparations were similar in both species. NGFFYamide also induced potent contraction in P. pectinifera cardiac stomach. Comparison of three NG peptides (NGFFYamide, NGFFFamide, and NGIWYamide) on P. pectinifera cardiac stomach revealed varying potency, suggesting class-specific receptor interactions. Tachyphylaxis was observed in P. pectinifera apical muscle but not in A. amurensis , warranting further investigation. Based on these results, it is plausible that NGFFYamide could be involved in regulating locomotion and feeding behavior in P. pectinifera , consistent with findings in Asterias rubens. • NG peptides from echinoderms belong to a family of neuropeptides, and are responsible for inducing relaxing and contractile activities. • This study reports the first purification of a neuropeptide (NGFFYamide) from the starfish Patiria pectinifera. • NGFFYamide induces contraction of P. pectinifera cardiac stomach, suggesting its role in feeding and digestion regulation. • Consistent with the activity assay results, RT-qPCR results showed high NGFFYamide expression levels in the radial nerve cord and the pyloric and cardiac stomachs. • Unlike A. amurensis , the apical muscle of P. pectinifera exhibited tachyphylaxis to NGFFYamide, likely due to differences in size and movement patterns between the two starfish species. [ABSTRACT FROM AUTHOR]

Despite the crucial role of microbial community composition in the quality and stability of seafood, little emphasis has been given to the microbiota profile of sea urchin gonads. This study investigates the microbial quality and community composition of sea urchin gonads (Echinus esculentus) as a function of harvesting season (autumn, winter, spring, and summer) and location (one site proximal to urban activity areas while the other is located in open water close to the coastline). Significant season-dependent variations were found in psychrotrophic and aerobic plate counts, with higher counts in summer, followed by autumn, spring, and winter. H 2 S-producing bacteria and Pseudomonas spp. counts were unaffected by harvesting season or location. Sea urchin gonad microbial composition proved resilient and dynamic, primarily shaped by seasonal variations, and minimally influenced by location. Winter and spring samples exhibited higher diversity than autumn and summer. Key genera like Pseudomonas , Psychromonas , Vibrio , Chryseobacterium , Shewanella , and Photobacterium varied seasonally. Pseudomonas , Vibrio , and Photobacterium are crucial in assessing microbial quality and safety due to their roles as specific spoilage organisms (SSOs) and, in some cases, human pathogens. Though relative abundances differed slightly between locations, harvesting location did not notably impact microbial community shaping in gonads. However, the results suggest that harvesting locations near areas with urban activity may lead to contamination with specific bacterial species, possibly due to water quality variations. These findings emphasize the importance of considering seasonality when evaluating sea urchin gonad microbial quality. Identifying key genera enhances insights into potential SSOs and human pathogens, enhancing food safety considerations in the consumption of raw or lightly processed sea urchin gonads and guiding the development of preservation methods to extend shelf life. [Display omitted] • Significant fluctuations in microbial counts across the seasons. • Microbial communities are both resilient and dynamic. • Seasonal variations in the microbial community composition. • Harvesting location slightly affected the microbiota profile. • Photobacterium , Vibrio and Pseudomonas mainly dominated the microbial communities. [ABSTRACT FROM AUTHOR]

The seismic water gun is widely used and plays an important role in seabed imaging acquisition; however, acoustic impacts on marine organisms are currently poorly understood. The aim of this study was to analyse the biochemical responses on the peristomial membrane (PM) of the sea urchin, Arbacia lixula , when exposed to water gun shots in open water. The PM (located around the mouth) is involved in vital functions, such as nutrition and protection. Individuals of sea urchins (n = 7 for each time slot) were sampled before, at the end, and at intervals of 3 h and 24 h after acoustic emission (duration of 20 min). Significant increases in superoxide dismutase, peroxidase, esterase and alkaline were observed immediately after water gun shots, highlighting an increase in the oxidative and inflammatory state of the tissue. Our results showed that acoustic impacts could interfere with PM vital functions, compromising the health, survival and ultimately the conservation of the species. Understanding these effects is crucial to predicting consequences on sea urchin populations and marine ecosystems. • Significant biochemical responses were observed in peristomal membrane of A. lixula under seismic water-gun noise exposure • HSP70 levels, antioxidant and hydrolase enzymes change after 20 minutes since water-gun activity. • Biochemical parameters evaluated return to control condition after 3 hours since water-gun activity. • A.lixula responds to acoustic stress after water-gun emission and re-establish homeostasis after three hours of emission. [ABSTRACT FROM AUTHOR]

Echinoderms produce functional gametes throughout their lifespan, in some cases exceeding 200 years. The histology and ultrastructure of echinoderm ovaries has been described but how these ovaries function and maintain the production of high-quality gametes remains a mystery. Here, we present the first single cell RNA sequencing data sets of mature ovaries from two sea urchin species (Strongylocentrotus purpuratus [Sp] and Lytechinus variegatus [Lv]), and one sea star species (Patiria miniata [Pm]). We find 14 cell states in the Sp ovary, 16 cell states in the Lv ovary and 13 cell states in the ovary of the sea star. This resource is essential to understand the structure and functional biology of the ovary in echinoderms, and better informs decisions in the utilization of in situ RNA hybridization probes selective for various cell types. We link key genes with cell clusters in validation of this approach. This resource also aids in the identification of the stem cells for prolonged and continuous gamete production, is a foundation for testing changes in the annual reproductive cycle, and is essential for understanding the evolution of reproduction of this important phylum., (© 2023 Wiley Periodicals LLC.)

Worldwide, there exist fewer than 10 large-scale hatcheries dedicated to the production of the sea cucumber Holothuria scabra. Most of the existing hatcheries operate at a pilot scale or receive financial support from research programs. Large-scale hatcheries are defined as private industries that annually produce a minimum of 500,000 juveniles and engage in the exportation of several tons of dried product. Here, we present, for the first time, an analysis of the embryo and larval productions from a large-scale hatchery that annually exports over 5 tons of H. scabra trepang. Utilizing this data, we assessed the impact of isolating broodstock in tanks with elevated temperatures for 10 days, referred to as "maturation tanks," on ovarian maturation. Furthermore, we conducted a comparative analysis to assess the effectiveness of thermal shock and in vitro fertilization (IVF) in obtaining embryos and larvae. The analyzed data originated from Indian Ocean Trepang, a private aquaculture company located in Madagascar. Between August 2017 and December 2018, a total of 291 fertilization trials were conducted, involving 6154 females and 2173 males. Over these 17 months, the total number of embryos obtained was 225 million through IVF and 147 million through thermal shock. The number of 3-day-old auricularia larvae obtained at 11 months was 95 million for IVF trials and 51 million for thermal shock trials. The incubation of broodstock in maturation tanks has been found to enhance ovarian maturity, resulting in a notable 1.3 to 1.5-fold increase in the number of ootids. The combined implementation of IVF and thermal shock methods demonstrated a substantial increase in the productivity of the H. scabra hatchery. Thermal shock is comparatively simpler to implement than IVF and yields higher embryo production per trial. However, it is characterized by greater unpredictability and leads to a higher degree of variability in outcomes. IVF offers superior control over fertilization parameters and furnishes valuable insights into the sexual maturity of the broodstock. During challenging periods, such as the cold season or copepod infestations, the implementation of in vitro fertilizations becomes essential for ensuring hatchery profitability. • A precise control of ovarian and oocyte maturations is necessary for sea cucumber hatchery success. • Incubating the broodstock in "maturation tanks" (i.e. , the isolation of breeders in tanks where the daytime temperature is increased by 8 °C, on average) improves ovarian maturity. • Thermal shocks and in vitro fertilization are both beneficial but thermal shocks are more practical. • In vitro fertilization provides valuable insight into broodstock maturity. • In vitro fertilization is critical for hatchery profitability during adverse conditions. [ABSTRACT FROM AUTHOR]

Nanoplastic contamination has become an issue of environmental concern but the information on the potential adverse effects of nanoplastics on marine ecosystems is still limited. Therefore, the aim of this work was to investigate the effects of the exposure to polystyrene nanoplastics (PS-NPs; 0.05, 0.5 and 5 μg/mL) on the brittles star Ophiactis virens. Diverse endpoints at different levels of biological organization were considered, including behavior, arm regeneration capacity and oxidative stress. PS-NPs were observed on the brittle star body surface but not in inner tissues. Accumulation of PS-NPs was observed in the pre-buccal cavity of animals exposed to 5 μg/mL PS-NPs which also displayed delayed righting activity and an oxidative stress condition. Nevertheless, no effect was observed on arm regeneration efficiency at any tested PS-NPs concentration. Overall, our results highlighted that prolonged exposure to high amounts of PS-NPs could interfere at least partially with the physiology of O. virens. [Display omitted] • Nanoplastics (NPs) effects on marine organisms is an issue of environmental concern. • We evaluated the effects of NPs exposure on the brittlestar Ophiactis virens. • Endpoints at different level of biological organization were considered. • High concentrations of NPs caused oxidative stress and behavioral impairment. • Brittlestars can be used as valid alternative model in marine ecotoxicology. [ABSTRACT FROM AUTHOR]

Sea urchins are important components of marine ecosystems and can act as bioindicators, reflecting the health of reefs. The spatial patterns of sea urchins are largely shaped by the type of habitat. In Hong Kong, coral communities are divided into two distinct types: reef-building coral habitats and non-reef-building coral habitats. In summer 2020, a qualitative survey was conducted using SCUBA at 56 sites across eastern and western waters, recording a total of 11 species from 6 families of sea urchins. Out of these 56 sites, 14 were selected for a quantitative survey to investigate the relationship between sea urchin assemblages and the two types of coral habitat. We found that the species composition of sea urchins differed significantly between the two habitats, and the presence of sand was a critical factor influencing the species composition of sea urchins. Sand coverage had a positive effect on Salmasic sphaeroides abundance but a negative effect on the abundance of Diadema setosum and Heliocidaris crassispina. The distribution of sea urchins across different degrees of sand coverage may be associated with food availability or species-specific adaptive behaviour, likely due to niche preferences. • Change in sea urchin species composition from RBC and NRBC habitats. • Sand coverage is an important factor that influences the sea urchin species composition. • The relationship between sea urchins and their habitat is species-specific. [ABSTRACT FROM AUTHOR]

This study was conducted with the aim of investigating the correlation between echinoderms diversity and physicochemical parameters in the Persian Gulf coastline in Bushehr province in 4 seasons from March to December 2017. The physicochemical parameters including water temperature, dissolved oxygen (DO), electrical conductivity (EC), salinity, pH and turbidity were measured at each sampling location. The results showed a significant correlation between echinoderms diversity and physicochemical parameters. The correlation coefficient of the Astropecten polyacanthus species with the parameters of temperature, DO, EC, salinity and turbidity was reported as -0.41, 0.64, -0.25, -0.44 and 0.60 respectively. This coefficient for the Ophiothrix fragilis species was reported as -0.68, 0.70, -0.21, -0.36 and -0.55 respectively. The results demonstrated that the most sensitive species were Astropecten polyacanthus and Ophiothrix fragilis respectively. The different species of echinoderms can be used as biological indicators of pollution in evaluating the physicochemical quality of marine environments. [Display omitted] • The echinoderms such as starfish, sea urchins, sea cucumbers, and brittle stars were identified. • The 90.54 % of the species were belonging to Ophidiasteridae , Ophiotrichidae , and Ophiocomidae. • The most sensitive species were Astropecten polyacanthus and Ophiothrix fragilis respectively. • Echinoderms can be used as bioindicators of marine pollution. [ABSTRACT FROM AUTHOR]

Biofluorescence in echinoderms is largely unexplored, and even though the green sea urchin Strongylocentrotus droebachiensis is a well-studied species, the presence and/or function of fluorescence remains very poorly understood. Hyperspectral imaging was conducted on adult sea urchins (N = 380) while fluorospectrometric analysis was conducted on sea urchin coelomic fluid (N = 30). Fluorescence was documented in both the spines and coelomic fluid of S. droebachiensis . Intact spines exhibited a low intensity green emission (∼550-600 nm), while broken spines averaged a high emission peak in the green spectrum (∼580 nm). Sea urchins produce a red exudate with a pronounced emission peak (∼680 nm) with a shoulder peak (∼730 nm). The sampled coelomic fluid exhibited high variability, with a majority exhibiting a low-level green fluorescence while pronounced emission peaks (N = 5) were found in the red spectrum (∼680 nm). The complex fluorescence produced by S. droebachiensis warrants further investigation on its applicability for monitoring welfare of sea urchins in aquaculture facilities., (Creative Commons Attribution license.)