36 results on '"Naskar S"'
Search Results
2. Nonlinear Stability of Curved Multiphase Composite Panels: Influence of Agglomeration in Randomly Distributed Carbon Nanotubes with Nonuniform In-Plane Loads
- Author
-
Chakraborty, S., primary, Naskar, S., additional, Dey, T., additional, Kumar, R., additional, and Mukhopadhyay, T., additional
- Published
- 2024
- Full Text
- View/download PDF
3. Active mechanical cloaking for unsupervised damage resilience in programmable elastic metamaterials.
- Author
-
Kundu, D., Naskar, S., and Mukhopadhyay, T.
- Subjects
- *
RANDOM fields , *DIGITAL twins , *PIEZOELECTRIC materials , *MANUFACTURING processes , *SERVICE life , *CLOAKING devices - Abstract
Owing to the architected void-filled low-density configurations, metamaterials are prone to defects during the complex manufacturing process, or damages under operational conditions. Recently mechanical cloaking has been proposed to shield the effect of such disorders in terms of homogenized mechanical responses. The major drawback in these studies are that the damage location should be known a priori, and the cloak is designed around that damaged zone before manufacturing. Such postulation does not allow unsupervised damage resilience during the manufacturing and service life of metamaterials by active reconfiguration of the stress field depending on the random and unpredictable evolution of damage. Here, we propose a radically different approach by introducing piezoelectric lattices where the effect of random appearance of any single or multiple disorders and damages with complex shapes, sizes and distributions can be shielded through active multi-physically controlled cloaks by voltage-dependent modulation of the stress fields within the cloaking region. Notably, this can be achieved without breaking periodicity and any additional material in the cloaking region unlike earlier studies concerning mechanical cloaks. The proposed active class of elastic metamaterials will bring a step-change in the on-demand mechanical performance of critically important structural components and unsupervised damage resilience for enhanced durability and sustainability. This article is part of the theme issue 'Current developments in elastic and acoustic metamaterials science (Part 1)'. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
4. On characterizing the viscoelastic electromechanical responses of functionally graded graphene-reinforced piezoelectric laminated composites: Temporal programming based on a semi-analytical higher-order framework.
- Author
-
Mondal, S., Shingare, K. B., Mukhopadhyay, T., and Naskar, S.
- Subjects
PIEZOELECTRIC composites ,FUNCTIONALLY gradient materials ,LAMINATED materials ,SHEAR (Mechanics) ,MICROELECTROMECHANICAL systems ,ELECTRICAL load ,PIEZOELECTRICITY - Abstract
The electromechanical responses of single and multi-layered piezoelectric functionally graded graphene-reinforced composite (FG-GRC) plates are studied based on an accurate higher-order shear deformation theory (HSDT) involving quasi-3D sinusoidal plate theory and linear piezoelectricity. These FG-GRC plates are composed of randomly oriented graphene nanoplatelets (GPLs) reinforcing fillers and the piezoelectric PVDF matrix considering two different distribution patterns such as linear- and uniform- distribution (LD and UD) of GPLs across the thickness. The modified Halpin-Tsai (HT) and Rule of mixture (ROM) models are utilized to determine the effective material properties of FG-GRCs. The analytical model of FG-GRCs is extended further to analyze the time-dependent linear viscoelastic electromechanical behavior of the system based on Biot model of viscoelasticity in the framework of inverse Fourier algorithm. The viscoelastic electromechanical responses include the static deformation and electric responses of simply supported FG-GRC plates which are investigated by considering transverse mechanical and external electrical loading, as well as other critical parameters like aspect ratio and weight fraction of GPLs. The numerical results reveal that the electromechanical response of FG-GRC plates can be enriched due to the addition of a small weight fraction of GPLs. The coupled multiphysics-based computational framework proposed here for predicting the viscoelastic electromechanical behavior of laminated composites can be exploited for stimulating and developing a wide range of micro-electro-mechanical systems (MEMS) and devices incorporating time-dependent programming features. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
5. On exploiting nonparametric kernel-based probabilistic machine learning over the large compositional space of high entropy alloys for optimal nanoscale ballistics.
- Author
-
Gupta, K. K., Barman, S., Dey, S., Naskar, S., and Mukhopadhyay, T.
- Subjects
BALLISTICS ,ENTROPY ,MOLECULAR dynamics ,KINETIC energy ,ENERGY dissipation ,MACHINE learning - Abstract
The large compositional space of high entropy alloys (HEA) often presents significant challenges in comprehensively deducing the critical influence of atomic composition on their mechanical responses. We propose an efficient nonparametric kernel-based probabilistic computational mapping to obtain the optimal composition of HEAs under ballistic conditions by exploiting the emerging capabilities of machine learning (ML) coupled with molecular-level simulations. Compared to conventional ML models, the present Gaussian approach is a Bayesian paradigm that can have several advantages, including small training datasets concerning computationally intensive simulations and the ability to provide uncertainty measurements of molecular dynamics simulations therein. The data-driven analysis reveals that a lower concentration of Ni with a higher concentration of Al leads to higher dissipation of kinetic energy and lower residual velocity, but with higher penetration depth of the projectile. To deal with such conflicting computationally intensive functional objectives, the ML-based simulation framework is further extended in conjunction with multi-objective genetic algorithm for identifying the critical elemental compositions to enhance kinetic energy dissipation with minimal penetration depth and residual velocity of the projectile simultaneously. The computational framework proposed here is generic in nature, and it can be extended to other HEAs with a range of non-aligned multi-physical property demands. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
6. Exploring buckling and post-buckling behavior of incompressible hyperelastic beams through innovative experimental and computational approaches.
- Author
-
Azarniya, O., Forooghi, A., Bidhendi, M. V., Zangoei, A., and Naskar, S.
- Subjects
MECHANICAL buckling ,ECCENTRIC loads ,MECHANICAL behavior of materials ,DIGITAL image correlation ,ENERGY function ,STRAIN energy ,RUBBER - Abstract
The objective of this paper is to conduct a comprehensive investigation into the buckling and post-buckling behavior of hyperelastic beams through both computational and experimental means. Natural rubber is used in the construction of a beam with a square cross-section. To determine the mechanical properties of natural rubber, a uniaxial tensile test is performed in accordance with ASTM D412. In finite element modeling (FEM), the nonlinear behavior of rubber is modeled using hyperelastic theory and the Yeoh strain energy function. The Static-Riks method is also implemented using Abaqus for the analysis of nonlinear buckling. To validate the present investigation results with FEM, an experimental test of digital image correlation (DIC) is conducted. The critical buckling force obtained via numerical methods exhibits an error of nearly 5% when compared to the corresponding results obtained from experimental testing. In order to ascertain the impact of various design parameters on the buckling behavior of the system, a comprehensive parametric analysis has been conducted. The parameters studied include the cross-sectional thickness, length of the structure, eccentric loads, as well as the mechanical properties of the materials used in the system. Consistent with the FEM outcomes, the critical buckling force exhibited by the hyperelastic beam demonstrates a positive correlation with increasing levels of hardness, cross-sectional thickness, and eccentric loads. The buckling behavior of the system is adversely affected by increasing its length. To ultimately validate the precision and reliability of the model, a supervised neural network (NN) learning method is employed. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
7. Frequency-band programmable piezoelectric energy harvesters with variable substrate material, tip mass and fractal architectures: Experimental and numerical investigations.
- Author
-
Mondal, S., Mukhopadhyay, T., Scarpa, F., and Naskar, S.
- Subjects
- *
CLEAN energy , *RENEWABLE energy sources , *ENERGY harvesting , *VIBRATION tests , *MICROELECTROMECHANICAL systems , *STRUCTURAL health monitoring , *PIEZOELECTRIC transducers , *SMART structures - Abstract
AbstractTo automate the approach of assessing the health and efficacy of large structural systems globally through structural health monitoring systems, a vast network of sensors that must be mounted throughout the entire structure and connected to a continuous power supply is necessary. Clusters of wires need to be placed throughout the structures to support the network, or batteries must be changed frequently, adding to the network’s high maintenance expenses. The present study investigates the scope of powering such low-energy devices with a localized renewable energy source based on smart piezoelectric components such as PZT-patched energy harvesting systems. This paper analyses the performance of the PZT patch mounted on different structures that are predominantly activated in d31 mode. A vibration testing rig is manufactured to perform experiments for investigating the effect of material properties, natural frequencies, vibrating structural mass, and their interaction with the output power of a PZT transducer. Optimal mass, material, and structural configurations are attempted to be identified experimentally. The hypothesis, predictions, and results are evaluated further based on a converged finite element model. Subsequently, we introduce a novel concept of chiral fractal substrates in piezoelectric energy harvesters, wherein a significant improvement is noticed in the energy output along with increased frequency-band programmability. The power output of such architected and optimized energy harvesters holds the potential to serve as a reliable and sustainable alternative to conventional batteries, effectively providing a renewable source of power to energize and sustain low-power micro-electro-mechanical systems (MEMS) and devices. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
8. Polystyrene Chain Geometry Probed by Ion Mobility Mass Spectrometry and Molecular Dynamics Simulations.
- Author
-
Naskar S, Minoia A, Duez Q, Izuagbe A, De Winter J, Blanksby SJ, Barner-Kowollik C, Cornil J, and Gerbaux P
- Abstract
Polystyrene (PS) is a thermoplastic polymer commonly used in various applications due to its bulk properties. Designing functional polystyrenes with well-defined structures for targeted applications is of significant interest due to the rigid and apolar nature of the polymer chain. Progress is hindered to date by the limitations of current analytical methods in defining the atomistic-level folding of the polymer chain. The integration of ion mobility spectrometry and molecular dynamics simulations is beneficial in addressing these challenges. However, data on gas-phase polystyrene ions are rarely reported in the literature. We herein investigate the gas phase structure of polystyrene ions with different end groups to establish how the nature and the rigidity of the monomer unit affect the charge stabilization. We find that, in contrast to polar polymers in which the charges are located deep in the ionic globules, the charges in the PS ions are rather located at the periphery of the polymer backbone, leading to singly and doubly charged PS ions adopting dense elliptic-shaped structures. Molecular dynamics (MD) simulations indicate that the folding of the PS rigid chain is controlled by phenyl ring interactions with the charge ultimately remaining excluded from the core of the globular ions, whereas the folding of polyether ions is initiated by the folding of the flexible polyether chain around the sodium ion that remains deeply enclosed in the core of the ions.
- Published
- 2024
- Full Text
- View/download PDF
9. Polyurethane/Carbon Nanotube-Based ThermoSense Electronic Skin: Perception to Decision Making Aided by Internet of Things Brain.
- Author
-
Haridas Cp A, Pillai SK, Naskar S, Mondal T, and Naskar K
- Subjects
- Humans, Internet of Things, Decision Making, Brain physiology, Skin chemistry, Nanotubes, Carbon chemistry, Polyurethanes chemistry, Wearable Electronic Devices
- Abstract
Human skin has several receptors collaborating with the brain to provide appropriate "decisions" when applying stimuli. Several research articles state that biomimetic electronic skin (e-skin) is reportedly used for sensor-related applications and performs similarly to natural skin. However, research reporting the capability of the e-skin to make decisions and therefore react upon exposure to adverse conditions is still in its nascent stage. Herein, we report the development of an e-skin, ThermoSense, that can thermoregulate by making appropriate decisions. Thermoplastic polyurethane and multiwalled carbon nanotubes were used as the model composite. The heating and sensing capabilities of the optimized e-skin were studied in detail. In the study window, the e-skin demonstrated excellent electrothermal conversion efficiency by generating a temperature of 192 °C, consuming a power of 2.23 W. A finite element modeling (FEM) was adopted to determine the distribution of the filler in the case of the optimized e-skin and thus was used to probe the reason for the heating across the e-skin via mapping of the internal energy across the sample. FEM results and experimental findings are in strong agreement. Additionally, the e-skin demonstrated its capability to act as a thermal sensor with a 0.947% °C
-1 sensitivity. To integrate the decision-making capabilities of the e-skin, an Internet of Things (IoT) brain console was made using the e-skin and electronic chips by leveraging More than Moore's concept. The IoT brain was automated with decision-making programming that was controllable via an in-house-developed mobile application. The console worked exclusively under simulated conditions. When there was a shift from the set point temperature, it started to heat. Postusage, the e-skin matrix was recycled, and the recycled e-skin demonstrated a marginal decrement in performance attributes. This study opens new avenues for developing decision-making e-skins for next-generation human-machine interphases.- Published
- 2024
- Full Text
- View/download PDF
10. Room Temperature Single-Component Organic Multiferroics with Large Magnetoelectric Coupling: Proficient Approach for Stray-Magnetic Field Harvesting.
- Author
-
Deepak, Saini D, Naskar S, Mandal D, and Roy RK
- Abstract
Magnetoelectric materials are highly desirable for technological applications due to their ability to produce electricity under a magnetic field. Among the various types of magnetoelectric materials studied, their organic counterparts provide an opportunity to develop solution-processable, flexible, lightweight, and wearable electronic devices. However, there is a rare choice of solution-processable, flexible, lightweight magnetoelectric materials which has tremendous technological interest. A supramolecular scaffold with precisely positioned structure-forming and functional units (electrical dipoles and magnetic spins) is designed so that self-assembly results in functional unit organization. Structure-forming segments allow these scaffolds to self-assemble into hierarchically ordered structures in nonpolar solvents, creating nanofibrous organogel networks. In particular, the xerogel derived from this organogel exhibits the highest magnetoelectric coupling coefficient (α
ME ≈ 216 mV Oe-1 cm-1 ) reported to date for organic materials. This is even greater than commonly envisioned composite materials made of piezoelectric polymers and inorganic magnets. This single-component organic multiferroic material displays ferroelectricity (Tc ≈ 46 °C) and paramagnetic behavior at room temperature. With this, it is demonstrated that the possibilities of effectively harvesting stray magnetic fields that are copiously available in the surroundings and wasted otherwise., (© 2024 Wiley‐VCH GmbH.)- Published
- 2024
- Full Text
- View/download PDF
11. An enhancer-AAV toolbox to target and manipulate distinct interneuron subtypes.
- Author
-
Furlanis E, Dai M, Leyva Garcia B, Vergara J, Pereira A, Pelkey K, Tran T, Gorissen BL, Vlachos A, Hairston A, Huang S, Dwivedi D, Du S, Wills S, McMahon J, Lee AT, Chang EF, Razzaq T, Qazi A, Vargish G, Yuan X, Caccavano A, Hunt S, Chittajallu R, McLean N, Hewit L, Paranzino E, Rice H, Cummins AC, Plotnikova A, Mohanty A, Tangen AC, Shin JH, Azadi R, Eldridge MAG, Alvarez VA, Averbeck BB, Alyahyay M, Reyes Vallejo T, Soheib M, Vattino LG, MacGregor CP, Banks E, Olah VJ, Naskar S, Hill S, Liebergall S, Badiani R, Hyde L, Xu Q, Allaway KC, Goldberg EM, Nowakowski TJ, Lee S, Takesian AE, Ibrahim LA, Iqbal A, McBain CJ, Dimidschstein J, Fishell G, and Wang Y
- Abstract
In recent years, we and others have identified a number of enhancers that, when incorporated into rAAV vectors, can restrict the transgene expression to particular neuronal populations. Yet, viral tools to access and manipulate fine neuronal subtypes are still limited. Here, we performed systematic analysis of single cell genomic data to identify enhancer candidates for each of the cortical interneuron subtypes. We established a set of enhancer-AAV tools that are highly specific for distinct cortical interneuron populations and striatal cholinergic neurons. These enhancers, when used in the context of different effectors, can target (fluorescent proteins), observe activity (GCaMP) and manipulate (opto- or chemo-genetics) specific neuronal subtypes. We also validated our enhancer-AAV tools across species. Thus, we provide the field with a powerful set of tools to study neural circuits and functions and to develop precise and targeted therapy., Competing Interests: DECLARATION OF INTERESTS G.F. is a founder of Regel Therapeutics, which has no competing interests with the present manuscript. G.F. is an advisor for Neuron and Annual Review of Neuroscience. J.D. and K.A. are employees of Regel Therapeutics and J.D. is also a founder. A.I. is the founder of Tibbling Technologies. Patents are pending on all enhancers present in this manuscript. For BiCHATe27 and BiSSTe10 G.F. and J.D hold this patent. For the remainder of enhancer patents they are held by G.F., M.D. and Y.W.
- Published
- 2024
- Full Text
- View/download PDF
12. Acid-Mediated Modulation of the Conductance of Diazapentalene Molecular Junctions.
- Author
-
An J, Luo X, Naskar S, Wu D, Herrmann C, Xia J, and Li H
- Abstract
We report an acid-mediated regulation of single-molecule junction conductance achieved using an electron-deficient unit, diazapentalene, functionalized with thiophene extending units and thiomethyl aurophilic terminal groups. This diazapentalene derivative exhibits a protonation reaction in the presence of trifluoroacetic acid, as characterized by UV-vis absorption spectroscopy, and the protonated species shows a voltage-dependent single-molecule conductance, which is not observed for the pristine molecules. Specifically, under a high bias voltage of 850 mV, we observe a conductance value for the protonated molecule larger than that for the deprotonated one by a factor of 4. Density functional theory-based transport calculations show a slight broadening of the HOMO and LUMO frontier orbitals, as well as a reduced HOMO-LUMO gap when the molecule becomes protonated; this implies an increased conductance under protonation that is consistent with the experimental conductance data. Our work demonstrates a new molecular design for versatile control of molecular conductance through the use of acid in the solvent environment.
- Published
- 2024
- Full Text
- View/download PDF
13. Individualized homeopathic medicines in preventing the progression from pre-diabetes to diabetes: A double-blind, randomized, placebo-controlled, parallel-arm trial.
- Author
-
Banerjee A, Ganguly S, Saha S, Bhattacharyya P, Naskar S, Mukherjee D, Ghosh S, Maji P, Saha S, Shaikh AR, Ghosh P, Chatterjee C, Koley M, and Mukherjee SK
- Subjects
- Humans, Double-Blind Method, Male, Female, Middle Aged, Adult, India, Homeopathy methods, Yoga, Glucose Tolerance Test, Diabetes Mellitus, Type 2 drug therapy, Treatment Outcome, Prediabetic State drug therapy, Blood Glucose drug effects, Blood Glucose metabolism, Glycated Hemoglobin metabolism, Disease Progression, Materia Medica therapeutic use
- Abstract
Context: Pre-diabetes is a significant public health problem worldwide. India has a very high rate of progression from pre-diabetes to diabetes, 75-78 per thousand persons per year., Objective: To study the efficacy of individualized homeopathic medicinal products (HMPs) against placebos in preventing the progression from pre-diabetes to diabetes., Design: Six-month, double-blind, randomized (1:1), two parallel arms, placebo-controlled trial., Setting: Outpatient departments of D. N. De Homoeopathic Medical College and Hospital, Kolkata, West Bengal, India., Patients: Sixty participants with pre-diabetes., Interventions: Verum: HMPs plus yoga therapy (YT; n = 30); control: identical-looking placebos plus YT (n = 30)., Main Outcome Measures: The primary efficacy endpoint was the proportion of participants progressing from pre-diabetes to diabetes, measured after three and six months. Secondary outcomes comprised of fasting blood glucose (FBS), oral glucose tolerance test (OGTT), glycated hemoglobin percentage (HbA1c%), lipid profile, liver enzymes (alanine transaminase, aspartate transaminase), urea and creatinine, and Measure Yourself Medical Outcome Profile version 2 (MYMOP-2); all measured after 3 and 6 months., Results: The proportion of participants converted from pre-diabetics to diabetics (n/N; n = diabetics, N = prediabetics) was significantly less in the verum group than control: HbA1C% (month 3: verum - 2/30 versus control - 11/30, p = 0.003; month 6: 3/30 vs. 2/30, p = 0.008), OGTT (month 3: 0/30 vs. 8/30, p = 0.015; month 6: 0/30 vs. 1/30, p = 0.008), but not according to FBS (month 3: 1/30 vs. 1/30, p = 0.779; month 6: 1/30 vs. 3/30, p = 0.469). Several secondary outcomes also revealed significant improvements in the verum group than in placebo: HbA1C% (p < 0.001), OGTT (p = 0.001), serum ALT (p = 0.031), creatinine (p = 0.012), and MYMOP-2 profile scores (p < 0.001). Sulphur, Bryonia alba, and Thuja occidentalis were the most frequently indicated medicines. Thus, HMPs outperformed placebos by successfully preventing the progression of pre-diabetes to diabetes., Trial Registration: Clinical Trials Registry - India CTRI/2022/04/042,026; UTN: U1111-1277-0021., (Copyright © 2024 Elsevier Inc. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
14. Tumor antigen presentation and the associated signal transduction during carcinogenesis.
- Author
-
Naskar S, Sriraman N, Sarkar A, Mahajan N, and Sarkar K
- Subjects
- Humans, Tumor Microenvironment immunology, Antigens, Neoplasm immunology, Antigens, Neoplasm metabolism, Animals, Phosphatidylinositol 3-Kinases metabolism, Signal Transduction, Neoplasms immunology, Neoplasms pathology, Antigen Presentation immunology, Carcinogenesis immunology, Carcinogenesis genetics
- Abstract
Numerous developments have been achieved in the study and treatment of cancer throughout the decades that it has been common. After decades of research, about 100 different kinds of cancer have been found, each with unique subgroups within certain organs. This has significantly expanded our understanding of the illness. A mix of genetic, environmental, and behavioral variables contribute to the complicated and diverse process of cancer formation. Mutations, or changes in the DNA sequence, are crucial to the development of cancer. These mutations have the ability to downregulate the expression and function of Major Histocompatibility Complex class I (MHC I) and MHCII receptors, as well as activate oncogenes and inactivate tumor suppressor genes. Cancer cells use this tactic to avoid being recognized by cytotoxic CD8
+ T lymphocytes, which causes issues with antigen presentation and processing. This review goes into great length into the PI3K pathway, changes to MHC I, and positive impacts of tsMHC-II on disease-free survival and overall survival and the involvement of dendritic cells (DCs) in different tumor microenvironments. The vital functions that the PI3K pathway and its link to the mTOR pathway are highlighted and difficulties in developing effective cancer targeted therapies and feedback systems has also been mentioned, where resistance mechanisms include RAS-mediated oncogenic changes and active PI3K signalling., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier GmbH. All rights reserved.)- Published
- 2024
- Full Text
- View/download PDF
15. Potent pincer-zinc catalyzed homogeneous α-alkylation and Friedländer quinoline synthesis reaction of secondary alcohols/ketones with primary alcohols.
- Author
-
Jana D, Roy S, Naskar S, Halder S, Kanrar G, and Pramanik K
- Abstract
Herein, we describe an air- and moisture-stable, homogeneous zinc catalyst stabilised using an electron deficient N^N^N pincer-type ligand. This ternary, penta-coordinated neutral molecular catalyst [Zn(N^N^N)Cl
2 ] selectively produces α-alkylated ketone derivatives (14 examples) through a one-pot acceptorless dehydrogenative coupling (ADC) reaction between secondary and primary alcohols using the borrowing hydrogen (BH) approach in good to excellent isolated yields (up to 93%). It is worth noting that this catalyst also provides an eco-friendly route for the synthesis of quinoline derivatives (30 examples) using 2-aminobenzyl alcohols as alkylating agents via successive dehydrogenative coupling and N-annulation reactions. This cost effective, easy to synthesize and environmentally benign catalyst shows excellent stability in catalytic cycles under open-air conditions, as evident from its high turnover number (∼104 ), and is activated by using a catalytic amount of base under milder conditions.- Published
- 2024
- Full Text
- View/download PDF
16. Effect of mindfulness-based intervention on perceived stress among breast cancer patients undergoing chemotherapy.
- Author
-
Naskar S, Dixit S, Varadharasu S, Pattnaik JI, and Singh R
- Abstract
Introduction: Breast cancer is the second most prevalent disease among women in India and one of the most dangerous and lethal. Chemotherapy-treated breast cancer patients may have perceived stress, which is defined as emotions of mental or physical exhaustion that make them feel angry or anxious. Mindfulness-based intervention (MBI) gives some ideas in line with the conventional mindfulness technique., Purposes: (i) To assess the effect of MBI on perceived stress among breast cancer patients undergoing chemotherapy. (ii) To determine the association between perceived stress with selected demographic variables among breast cancer patients undergoing chemotherapy., Methods: The current quantitative pre- and postexperimental study was carried out in two oncology departments of selected cancer hospitals, Bhubaneswar. A total number of 40 breast cancer patients of perceived stress receiving chemotherapy and data were gathered by using a self-structured socio-demographic proforma and a structured Perceived Stress Scale 10. The experimental group received MBI, and a posttest was conducted on the 17
th day on both the groups after 10 days of the termination of intervention. This MBI was provided to breast cancer patients for five sessions over five days continuously, each session for 45 min with mindfulness breathing exercises, progressive muscle relaxation techniques, practising meditation, and guided imagery technique., Results: The study findings illustrated that reduction of perceived stress among female breast cancer patients undergoing chemotherapy with ( t = 2.2463) ( P = 0.0306) at the P < 0.05; furthermore, there is one socio-demographic variable which had association with perceived stress that is history of psychiatric illness ( χ2 = 14.1176) ( P = 0.0009) and others had no association with perceived stress., Conclusion: MBI was an effective therapy for reducing the perceived stress of breast cancer patients undergoing chemotherapy., Competing Interests: There are no conflicts of interest., (Copyright: © 2024 Journal of Family Medicine and Primary Care.)- Published
- 2024
- Full Text
- View/download PDF
17. Individualized Homeopathic Medicines in the Treatment of Knee Osteoarthritis: Double-Blind, Randomized, Placebo-Controlled Feasibility Trial.
- Author
-
Bhattacharyya S, Chatterjee C, Saha S, Naskar S, Bhattacharya P, Alam SM, Sengupta S, Ahamed S, Shaikh AR, Koley M, Ghosh P, and Mukherjee SK
- Subjects
- Humans, Double-Blind Method, Male, Female, Middle Aged, Materia Medica therapeutic use, Treatment Outcome, India, Aged, Quality of Life, Precision Medicine methods, Adult, Pain Measurement methods, Osteoarthritis, Knee drug therapy, Feasibility Studies, Homeopathy methods
- Abstract
Introduction: This study aimed at examining the feasibility issues of comparing individualized homeopathic medicines (IHMs) with identical-looking placebos for treating knee osteoarthritis (OA)., Methods: Forty eligible patients participated in this double-blind, randomized (1:1), placebo-controlled feasibility trial in the outpatient clinics of a homeopathic hospital in West Bengal, India. Either IHMs or identical-looking placebos were administered, along with mutually agreed-upon concomitant care guidelines. The Knee Injury and Osteoarthritis Outcome Score (KOOS) was the primary outcome measure, along with derived Western Ontario and McMaster Universities Arthritis Index (WOMAC) scores from KOOS. The EQ-5D-5L questionnaire and Visual Analog Scale (VAS) were the secondary outcomes. All were measured at baseline and after 2 months. Group differences and effect sizes (Cohen's d ) were estimated using an intention-to-treat approach. p -Values less than 0.05 (two-tailed) were considered statistically significant., Results: Enrolment/screening and trial retention rates were 43% and 85% respectively. Recruitment was difficult owing to the coronavirus disease 2019 (COVID-19) lockdown. Group differences were statistically significant, favoring IHMs against placebos in all the KOOS sub-scales: symptoms ( p < 0.001), pain ( p = 0.002), activities of daily living ( p < 0.001), sports or recreation ( p = 0.016), and quality of life ( p = 0.002). Derived WOMAC scores from KOOS favored IHMs against placebos: stiffness ( p < 0.001) and pain ( p < 0.001). The EQ-5D-5L questionnaire score ( p < 0.001) and EQ-5D-5L VAS scores ( p < 0.001) also yielded significant results, favoring IHMs over placebos. All the effect sizes ranged from moderate to large. Sulphur was the most frequently prescribed homeopathic medication. Neither group reported any harm or serious adverse events., Conclusion: Although recruitment was sub-optimal due to prevailing COVID-19 conditions during the trial, the action of IHMs was found to be superior to that of placebos in the treatment of knee OA. Larger and more definitive studies, with independent replications, are warranted in order to substantiate the findings., Trial Registration: CTRI/2021/02/031453., Competing Interests: None declared., (Faculty of Homeopathy. This article is published by Thieme.)
- Published
- 2024
- Full Text
- View/download PDF
18. Dominant B cell-T cell epitopes instigated robust immune response in-silico against Scrub Typhus.
- Author
-
Agarwal S, Harsukhbhai Chandpa H, Naskar S, Lal Meena C, Kumar Panda A, and Meena J
- Subjects
- Humans, Molecular Docking Simulation, Bacterial Vaccines immunology, Computer Simulation, Computational Biology methods, T-Lymphocytes, Cytotoxic immunology, Machine Learning, B-Lymphocytes immunology, Toll-Like Receptor 2 immunology, Scrub Typhus immunology, Scrub Typhus prevention & control, Orientia tsutsugamushi immunology, Epitopes, B-Lymphocyte immunology, Epitopes, T-Lymphocyte immunology, Vaccines, Subunit immunology
- Abstract
Scrub typhus, a potentially life-threatening infectious disease, is attributed to bacteria Orientia tsutsugamushi (O. tsutsugamushi). The transmission of this illness to humans occurs through the bite of infected chiggers, which are the larval forms of mites belonging to the genus Leptotrombidium. In this research, we developed a subunit vaccine specifically designed to target outer membrane proteins. Immunodominant cytotoxic T-lymphocytes (CTLs), B- lymphocytes (BCLs), and major histocompatibility complex (MHC)- II epitopes were identified using machine learning and bioinformatics approaches. These epitopes were arranged in different combinations with the help of suitable linkers like AAY, KK, GPGPG and adjuvant (cholera toxin B) that resulted in a vaccine construct. Physiochemical properties were assessed, where the predicted solubility (0.571) was higher than threshold value. Tertiary structure was predicted using I-TASSER web server and evaluated using Ramachandran plot (94 % residues in most favourable region) and z-score (-6.04), which had shown the structure to have good stability and residue arrangement. Molecular docking with immune receptors, Toll-like receptor (TLR)-2 and -4 showed good residue interaction with 13 and 5 hydrogen bonds respectively. Molecular dynamics simulations of receptor-ligand complex provided the idea about the strong interaction having 1.524751 × 10
-5 eigenvalue. Amino acid sequence of vaccine was converted to nucleotide sequence and underwent codon optimization. The optimized codon sequence was used for in-silico cloning, which provided idea about the possibility of synthesis of vaccine using E. coli as host. Overall, this study provided a promising blueprint for a scrub typhus vaccine, although experimental validation is needed for confirmation. Furthermore, it is crucial to acknowledge that while bioinformatics provides valuable insights, in-vitro and in-vivo studies are imperative for a comprehensive evaluation of vaccine candidate. Thus, the integration of computational predictions with empirical research is essential to validate the efficacy, safety, and real-world applicability of the designed vaccine against Scrub Typhus. Nevertheless, the findings are good to carry forward for in-vitro and in-vivo investigations., Competing Interests: Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Authors declare that they don’t have any financial or personal relationship which may considered as competing interest. If there are other authors, they declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier Ltd. All rights reserved.)- Published
- 2024
- Full Text
- View/download PDF
19. Super epitope dengue vaccine instigated serotype independent immune protection in-silico.
- Author
-
Naskar S, Harsukhbhai Chandpa H, Agarwal S, and Meena J
- Subjects
- Humans, Computer Simulation, Vaccines, Subunit immunology, Computational Biology methods, Immunodominant Epitopes immunology, Antibody-Dependent Enhancement immunology, Epitopes immunology, Antibodies, Viral immunology, Dengue Vaccines immunology, Dengue Virus immunology, Serogroup, Dengue prevention & control, Dengue immunology, Epitopes, B-Lymphocyte immunology
- Abstract
Dengue becomes the most common life-threatening infectious arbovirus disease globally, with prevalence in the tropical and subtropical areas. The major clinical features include dengue haemorrhagic fever (DHF) and dengue shock syndrome (DSS), a condition of hypovolemic shock. Four different serotypes of the dengue virus, known as dengue virus serotype (DENV)- 1, 2, 3 and 4 can infect humans. Only one vaccine is available in the market, named Dengvaxia by Sanofi Pasteur, but there is no desired outcome of this treatment due the antibody dependent enhancement (ADE) of the multiple dengue serotypes. As of now, there is no cure against dengue disease. Our goal in this work was to create a subunit vaccine based on several epitopes that would be effective against every serotype of the dengue virus. Here, computational methods like- immunoinformatics and bioinformatics were implemented to find out possible dominant epitopes. A total of 21 epitopes were chosen using various in-silico techniques from the expected 133 major histocompatibility complex (MHC)- I and major histocompatibility complex (MHC)- II epitopes, along with 95 B-cell epitopes which were greatly conserved. Immune stimulant, non-allergenic and non-toxic immunodominant epitopes (super epitopes) with a suitable adjuvant (Heparin-Binding Hemagglutinin Adhesin, HBHA) were used to construct the vaccine. Following the physicochemical analysis, vaccine construct was docked with Toll-like receptors (TLRs) to predict the immune stimulation. Consequently, the optimal docked complex that demonstrated the least amount of ligand-receptor complex deformability was used to conduct the molecular dynamics analysis. By following the codon optimization, the final vaccine molecule was administered into an expressing vector to perform in-silico cloning. The robust immune responses were generated in the in-silico immune simulation analysis. Hence, this study provides a hope to control the dengue infections. For validation of the immune outcomes, in-vitro as well as in-vivo investigations are essential., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier Ltd. All rights reserved.)
- Published
- 2024
- Full Text
- View/download PDF
20. A scattered volume emitter micropixel architecture for ultra efficient light extraction from DUV LEDs.
- Author
-
Ahmad Fajri FA, Mukherjee A, Naskar S, Ahmad Noorden AF, and Abass A
- Abstract
Deep ultraviolet light-emitting diodes (DUV LEDs) typically suffer from strong parasitic absorption in the p-epitaxial layer and rear metal contact/mirror. This problem is exacerbated by a substantial portion of the multiple quantum well (MQW) emissions having a strong out-of-plane dipole component, contributing to emission in widely oblique directions outside the exit cone of the front semiconductor emitting surface. To address this, we propose an architecture that leverages such a heavily oblique angular emission profile by utilizing spaced-apart or scattered volume emitter micropixels that are embedded in a low-index dielectric buffer film with a patterned top surface. This approach achieves high light extraction efficiency at the expense of enlarging the effective emission area, however, it does not require a high-index (e.g., sapphire) substrate or a lens or a nanotextured epi for outcoupling purposes. Hybrid wave and ray optical simulations demonstrated a remarkable larger than three to sixfold increase in light extraction efficiency as compared to that of a conventional planar LED design with a sapphire substrate depending on the assumed epi layer absorption, pixel size, and ratio of light emission area to the MQW active area. An extraction efficiency three times greater than that of a recent nanotextured DUV LED design was also demonstrated. This architecture paves the way for DUV LEDs to have a plug efficiency comparable to that of mercury lamps while being significantly smaller., (© 2024. The Author(s).)
- Published
- 2024
- Full Text
- View/download PDF
21. Design of Mixed-Matrix MOF Membranes with Asymmetric Filler Density and Intrinsic MOF/Polymer Compatibility for Enhanced Molecular Sieving.
- Author
-
Hardian R, Jia J, Diaz-Marquez A, Naskar S, Fan D, Shekhah O, Maurin G, Eddaoudi M, and Szekely G
- Abstract
The separation of high-value-added chemicals from organic solvents is important for many industries. Membrane-based nanofiltration offers a more energy-efficient separation than the conventional thermal processes. Conceivably, mixed-matrix membranes (MMMs), encompassing metal-organic frameworks (MOFs) as fillers, are poised to promote selective separation via molecular sieving, synergistically combining polymers flexibility and fine-tuned porosity of MOFs. Nevertheless, conventional direct mixing of MOFs with polymer solutions results in underutilization of the MOF fillers owing to their uniform cross-sectional distribution. Therefore, in this work, a multizoning technique is proposed to produce MMMs with an asymmetric-filler density, in which the MOF fillers are distributed only on the surface of the membrane, and a seamless interface at the nanoscale. The design strategy demonstrates five times higher MOF surface coverage, which results in a solvent permeance five times higher than that of conventional MMMs while maintaining high selectivity. Practically, MOFs are paired with polymers of similar chemical nature to enhance their adhesion without the need for surface modification. The approach offers permanently accessible MOF porosity, which translates to effective molecular sieving, as exemplified by the polybenzimidazole and Zr-BI-fcu-MOF system. The findings pave the way for the development of composite materials with a seamless interface., (© 2024 The Authors. Advanced Materials published by Wiley‐VCH GmbH.)
- Published
- 2024
- Full Text
- View/download PDF
22. TCF3::PBX1 fusion pediatric B acute lymphoblastic leukemia in disguise behind the eyes - an unusual clinicopathologic presentation with hyperdiploid clone.
- Author
-
Naskar S, Paul T, Kulkarni JD, Anand KC, Divya V, and Rambhojun HD
- Subjects
- Humans, Male, Child, Female, Diploidy, In Situ Hybridization, Fluorescence, Oncogene Proteins, Fusion genetics, Precursor B-Cell Lymphoblastic Leukemia-Lymphoma genetics, Precursor B-Cell Lymphoblastic Leukemia-Lymphoma diagnosis, Precursor B-Cell Lymphoblastic Leukemia-Lymphoma pathology
- Published
- 2024
- Full Text
- View/download PDF
23. Anaesthesia for a patient of Hajdu Cheney syndrome scheduled for scoliosis surgery-A case study.
- Author
-
Chaturvedi A, Subramaniam R, Pandey R, and Naskar S
- Abstract
Competing Interests: There are no conflicts of interest.
- Published
- 2024
- Full Text
- View/download PDF
24. Rapid quality assessment and traceability of ginger powder from Northeast India and Indian market based on near infrared spectroscopic fingerprinting.
- Author
-
Naskar S, Sing D, Banerjee S, Shcherbakova A, Bandyopadhyay A, Kar A, Haldar PK, Sharma N, Mukherjee PK, and Bandyopadhyay R
- Abstract
Introduction: Ginger (Zingiber officinale Rosc.) varies widely due to varying concentrations of phytochemicals and geographical origin. Rapid non-invasive quality and traceability assessment techniques ensure a sustainable value chain., Objective: The objective of this study is the development of suitable machine learning models to estimate the concentration of 6-gingerol and check traceability based on the spectral fingerprints of dried ginger samples collected from Northeast India and the Indian market using near-infrared spectrometry., Methods: Samples from the market and Northeast India underwent High Performance Liquid Chromatographic analysis for 6-gingerol content estimation. Near infrared (NIR) Spectrometer acquired spectral data. Quality prediction utilized partial least square regression (PLSR), while fingerprint-based traceability identification employed principal component analysis and t-distributed stochastic neighbor embedding (t-SNE). Model performance was assessed using RMSE and R
2 values across selective wavelengths and spectral fingerprints., Results: The standard normal variate pretreated spectral data over the wavelength region of 1,100-1,250 nm and 1,325-1,550 nm showed the optimal calibration model with root mean square error of calibration and R2 C (coefficient of determination for calibration) values of 0.87 and 0.897 respectively. A lower value (0.24) of root mean square error of prediction and a higher value (0.973) of R2 P (coefficient of determination for prediction) indicated the effectiveness of the developed model. t-SNE performed better clustering of samples based on geographical location, which was independent of gingerol content., Conclusion: The developed NIR spectroscopic model for Indian ginger samples predicts the 6-gingerol content and provides geographical traceability-based identification to ensure a sustainable value chain, which can promote efficiency, cost-effectiveness, consumer confidence, sustainable sourcing, traceability, and data-driven decision-making., (© 2024 John Wiley & Sons Ltd.)- Published
- 2024
- Full Text
- View/download PDF
25. Solid Lipid Nanoparticles: A Review of their Biomedical Applications and Preparation.
- Author
-
Jana M, Biswas UK, Patra CS, Debnath B, Sharma S, and Naskar S
- Abstract
Solid lipid nanoparticles (SLNs) are gaining significant attention in the pharmaceutical industry due to their biocompatibility and biodegradability, making them a popular functional nanocarrier. SLNs are a popular nanocarrier due to their ability to bypass the spleen and liver, offer high drug stability, and improve bioavailability, sterilization, immobilization, targeted drug release, and biocompatible ingredients. This article discusses various SLN preparation techniques, including high shear homogenization, hot homogenization, cold homogenization, microemulsion-based, solvent evaporation, solvent emulsification-evaporation, supercritical fluid-based, spray drying, double emulsion, and precipitation techniques, focusing on methodological aspects. This review discusses the physicochemical behavior of SLNs, including drug loading, release, particle size, stability, cytotoxicity, and cellular uptake, and their major biomedical applications., (Copyright© Bentham Science Publishers; For any queries, please email at epub@benthamscience.net.)
- Published
- 2024
- Full Text
- View/download PDF
26. Spatio-temporal expression of polyphenol oxidase unveils the dynamics of L-DOPA accumulation in faba bean ( Vicia faba L.).
- Author
-
Jena S, Sanyal R, Jawed DM, Sengupta K, Pradhan B, Sinha SK, Sarkar B, Kumar S, Lenka SK, Naskar S, Bhadana VP, and Bishi SK
- Abstract
Faba bean ( Vicia faba L.) is a winter season grain legume and a rich source of the anti-parkinson drug, L-3,4-dihydroxyphenylalanine (L-DOPA). The biosynthesis of L-DOPA in plants is not uniform and remains largely unexplored. While the hydroxylase activities of Tyrosine Hydroxylase (TH), the Cytochrome P450 (CYP450) class of enzymes, and Polyphenol Oxidases (PPOs) on tyrosine substrate have been reported in plants, only the roles of PPOs in L-DOPA biosynthesis have been recently established in velvet bean ( Mucuna pruriens ). To understand the differential accumulation of L-DOPA in different tissues of faba bean, profiling of L-Tyrosine, L-DOPA, Tyramine, and Dopamine in different tissues was performed. Differential accumulation of L-DOPA depended on tissue type and maturity. Furthermore, dopamine biosynthesis through L-DOPA from L-Tyr was confirmed in faba bean. The expression analysis of PPOs in leaf and flower tissues revealed the selective induction of only four ( HePPO-2 , HePPO-7 , HePPO-8b , and HePPO-10 ) out of ten genes encoding different PPOs mined from the faba bean genome. Higher accumulation of L-DOPA in young leaves and flower buds than in mature leaves and flowers was accompanied by significantly higher expression of HePPO-10 and HePPO-7 , respectively. The role of various transcription factors contributing to such metabolite dynamics was also predicted. Further exploration of this mechanism using a multi-omics approach can provide meaningful insight and pave the way for enhancing L-DOPA content in crops., Supplementary Information: The online version contains supplementary material available at 10.1007/s12298-024-01449-2., Competing Interests: Conflict of interestThe authors declare that they have no conflict of interest., (© Prof. H.S. Srivastava Foundation for Science and Society 2024. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.)
- Published
- 2024
- Full Text
- View/download PDF
27. Controlled Molecular Orientation through Intercalation in PVDF Thin Films: Exhibiting Ultralong Retention and Improved Leakage Current.
- Author
-
Malik P, Naskar S, Sengupta D, and Mandal D
- Abstract
Ferroelectric switching and retention performance of poly(vinylidene fluoride) (PVDF) thin films improve by the incorporation of unmodified smectite montmorillonite (MMT) clay nanodielectric. In the present study, an intercalated PVDF (clay/PVDF) thin film with edge-on β-crystallite is fabricated via a heat-controlled spin coating (HCSC) technique. This provides an efficient and simple way to fabricate the edge-on oriented crystallite lamellae with an electroactive β-phase, facilitating nanoscale ferroelectric switching at a lower voltage compared to the face-on orientation. Here, we demonstrate the polarization retention for periods longer than 20 days (∼480 h, i.e., 1.8 × 10
6 s), with no degradation in switched nanoscale domains. In addition, by maintaining the relatively high dielectric constant, the incorporation of nanoclay effectively lowers the leakage current by 102 factors. The obtained memory window in the edge-on orientation is 7 V, approximately twice the memory window obtained in the face-on orientation. In short, our findings provide a simple and promising route to fabricate edge-on oriented PVDF thin films, with ultralong retention, high dielectric constant, and improved leakage current.- Published
- 2024
- Full Text
- View/download PDF
28. Unconventional mechanical and thermal behaviours of MOF CALF-20.
- Author
-
Fan D, Naskar S, and Maurin G
- Abstract
CALF-20 was recently identified as a benchmark sorbent for CO
2 capture at the industrial scale, however comprehensive atomistic insight into its mechanical/thermal properties under working conditions is still lacking. In this study, we developed a general-purpose machine-learned potential (MLP) for the CALF-20 MOF framework that predicts the thermodynamic and mechanical properties of the structure at finite temperatures within first-principles accuracy. Interestingly, CALF-20 was demonstrated to exhibit both negative area compression and negative thermal expansion. Most strikingly, upon application of the tensile strain along the [001] direction, CALF-20 was shown to display a distinct two-step elastic deformation behaviour, unlike typical MOFs that undergo plastic deformation after elasticity. Furthermore, this MOF was shown to exhibit a fracture strain of up to 27% along the [001] direction at room temperature comparable to that of MOF glasses. These abnormal thermal and mechanical properties make CALF-20 as attractive material for flexible and stretchable electronics and sensors., (© 2024. The Author(s).)- Published
- 2024
- Full Text
- View/download PDF
29. Immunomodulatory effects of Diospyros peregrina fruit preparation (DFP) in non-small cell lung cancer (NSCLC) by utilizing dendritic cell-mediated antigen presentation and T helper (TH) cell differentiation.
- Author
-
Sriraman N, Sarkar A, Naskar S, Mahajan N, Mukherjee O, Pradeep R, George M, and Sarkar K
- Subjects
- Humans, Antigen Presentation, Fruit, Dendritic Cells, T-Lymphocytes, Cytotoxic, Cell Differentiation, Carcinoma, Non-Small-Cell Lung metabolism, Lung Neoplasms metabolism, Diospyros
- Abstract
Diospyros peregrina is a dioecious plant which is native to India. It belongs to the family of Ebenaceae and is extensively used to treat various ailments, such as leucorrhoea and other uterine-related problems. Though few studies have been on D. peregrina for their anti-tumour response, little is known. Therefore, this intrigued us to understand its immunomodulator capabilities on various types of cancer extensively. Our primary focus is on NSCLC (Non-Small Cell Lung Cancer), which is ranked as the second largest form of cancer in the world, and the treatments demand non-invasive agents to target NSCLC effectively. In an objective to generate an efficient Lung Cancer Associated Antigen (LCA) specific anti-tumour immune response, LCA was presented using dendritic cells (DCs) in the presence of D. peregrina fruit preparation (DFP). Moreover, we also investigated DFP's role in the differentiation of T-helper (T
H ) cells. Therefore, this study aimed at better LCA presentation mediated by DFP by activating the LCA pulsed DCs and T helper cell differentiation for better immune response. DCs were pulsed with LCA for tumour antigen presentation in vitro, with and without DFP. Differentially pulsed DCs were irradiated to co-culture with autologous and allogeneic lymphocytes. Extracellular supernatants were collected for the estimation of cytokine levels by ELISA. LDH release assay was performed to test Cytotoxic T lymphocytes (CTLs) mediated lung tumour cell cytotoxicity. Thus, DFP may be a potential vaccine to generate anti-LCA immune responses to restrict NSCLC., (© 2024. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)- Published
- 2024
- Full Text
- View/download PDF
30. Cytoplasmic Expression of p16 Is Associated with Carcinoma Breast: It Is Not an Artifact.
- Author
-
Naskar S, Tanveer N, Sharma S, and Kaur N
- Abstract
Background & Objective: p16 has different roles in the nuclear and cytoplasmic locations. The nuclear localization of the p16 protein explains its role in cell cycle regulation. Cytoplasmic expression was considered an artifact in the initial years, but there is evidence to prove that cytoplasmic localization is real and that p16 has different roles in the nuclear and cytoplasmic locations. We aimed to study the immunoexpression of p16 protein in the nuclear and cytoplasmic locations of the epithelial and stromal compartments of fibroadenoma, invasive breast carcinoma, and a select number of phyllodes tumors., Methods: The study included a total of 107 patients, comprising 51 cases of invasive breast carcinoma, 51 cases of fibroadenoma, 4 cases of benign phyllodes tumors, and 1 case of lobular carcinoma in situ (LCIS). The p16 immunohistochemistry was evaluated for nuclear and cytoplasmic localization in the epithelial and stromal compartments of the tumors., Results: Of the 51 fibroadenoma cases, 23 showed strong nuclear p16 epithelial expression, but no case showed cytoplasmic expression. In 19/51 cases, stromal cells also showed strong p16 nuclear expression. Moderate stromal p16 expression was observed in 3 out of 4 cases of benign phyllodes. Out of the 51 cases of invasive carcinoma, 31 showed moderate to strong nuclear p16 immunopositivity, while 27 cases exhibited cytoplasmic p16 expression. We found a statistically significant correlation between moderate to strong nuclear p16 immunoexpression and the molecular subtype of breast carcinoma., Conclusion: The cytoplasmic localization of p16 immunohistochemistry is not seen in epithelial components of fibroadenoma, while it is seen frequently in breast carcinoma. Nuclear p16 expression has a statistically significant correlation with molecular subtypes of breast carcinoma., Competing Interests: The authors declared no conflicts of interest., (© 2024.)
- Published
- 2024
- Full Text
- View/download PDF
31. Loss of Ezh2 in the medial ganglionic eminence alters interneuron fate, cell morphology and gene expression profiles.
- Author
-
Rhodes CT, Asokumar D, Sohn M, Naskar S, Elisha L, Stevenson P, Lee DR, Zhang Y, Rocha PP, Dale RK, Lee S, and Petros TJ
- Abstract
Introduction: Enhancer of zeste homolog 2 (Ezh2) is responsible for trimethylation of histone 3 at lysine 27 (H3K27me3), resulting in repression of gene expression. Here, we explore the role of Ezh2 in forebrain GABAergic interneuron development., Methods: We removed Ezh2 in the MGE by generating Nkx2-1Cre;Ezh2 conditional knockout mice. We then characterized changes in MGE-derived interneuron fate and electrophysiological properties in juvenile mice, as well as alterations in gene expression, chromatin accessibility and histone modifications in the MGE., Results: Loss of Ezh2 increases somatostatin-expressing (SST+) and decreases parvalbumin-expressing (PV+) interneurons in the forebrain. We observe fewer MGE-derived interneurons in the first postnatal week, indicating reduced interneuron production. Intrinsic electrophysiological properties in SST+ and PV+ interneurons are normal, but PV+ interneurons display increased axonal complexity in Ezh2 mutant mice. Single nuclei multiome analysis revealed differential gene expression patterns in the embryonic MGE that are predictive of these cell fate changes. Lastly, CUT&Tag analysis revealed that some genomic loci are particularly resistant or susceptible to shifts in H3K27me3 levels in the absence of Ezh2 , indicating differential selectivity to epigenetic perturbation., Discussion: Thus, loss of Ezh2 in the MGE alters interneuron fate, morphology, and gene expression and regulation. These findings have important implications for both normal development and potentially in disease etiologies., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest. The author(s) declared that they were an editorial board member of Frontiers, at the time of submission. This had no impact on the peer review process and the final decision., (Copyright © 2024 Rhodes, Asokumar, Sohn, Naskar, Elisha, Stevenson, Lee, Zhang, Rocha, Dale, Lee and Petros.)
- Published
- 2024
- Full Text
- View/download PDF
32. PREFRONTAL CORRELATES OF FEAR GENERALIZATION DURING ENDOCANNABINOID DEPLETION.
- Author
-
Rosas-Vidal LE, Naskar S, Mayo LM, Perini I, Altemus M, Engelbrektsson H, Jagasia P, Heilig M, and Patel S
- Abstract
Maladaptive fear generalization is one of the hallmarks of trauma-related disorders. The endocannabinoid 2-arachidonoylglycerol (2-AG) is crucial for modulating anxiety, fear, and stress adaptation but its role in balancing fear discrimination versus generalization is not known. To address this, we used a combination of plasma endocannabinoid measurement and neuroimaging from a childhood maltreatment exposed and non-exposed mixed population combined with human and rodent fear conditioning models. Here we show that 2-AG levels are inversely associated with fear generalization at the behavioral level in both mice and humans. In mice, 2-AG depletion increases the proportion of neurons, and the similarity between neuronal representations, of threat-predictive and neutral stimuli within prelimbic prefrontal cortex ensembles. In humans, increased dorsolateral prefrontal cortical-amygdala resting state connectivity is inversely correlated with fear generalization. These data provide convergent cross-species evidence that 2-AG is a key regulator of fear generalization and suggest 2-AG deficiency could represent a trauma-related disorder susceptibility endophenotype., Competing Interests: Disclosures: Dr. Patel is a scientific consultant for Psy Therapeutics, Janssen Pharmaceuticals, and Jazz Pharmaceuticals for work unrelated to the topic of this manuscript. Dr. Heilig has received consulting fees, research support, or other compensation from Indivior, Camurus, BrainsWay, Aelis Farma, and Janssen Pharmaceuticals. Dr. Mayo is a scientific consultant for Synendos Therapeutics. The other authors report no financial relationships with commercial interests.
- Published
- 2024
- Full Text
- View/download PDF
33. Electrocatalytic Water Oxidation by Mononuclear Copper Complexes of Bis-amide Ligands with N4 Donor: Experimental and Theoretical Investigation.
- Author
-
Khan S, Sengupta S, Khan MA, Sk MP, Jana NC, and Naskar S
- Abstract
The present work describes electrocatalytic water oxidation of three monomeric copper complexes [Cu
II (L1)] ( 1 ), [CuII (L2)(H2 O)] ( 2 ), and [CuII (L3)] ( 3 ) with bis-amide tetradentate ligands: L1 = N , N '-(1,2-phenylene)dipicolinamide, L2 = N , N '-(4,5-dimethyl-1,2-phenylene)bis(pyrazine-2-carboxamide), L3 = N , N '-(1,2-phenylene)bis(pyrazine-2-carboxamide), for the production of molecular oxygen by the oxidation of water at pH 13.0. Ligands and all complexes have been synthesized and characterized by single crystal XRD, analytical, and spectroscopic techniques. X-ray crystallographic data show that the ligand coordinates to copper in a dianionic fashion through deprotonation of two -NH protons. Cyclic voltammetry study shows a reversible copper-centered redox couple with one ligand-based oxidation event. The electrocatalytic water oxidation occurs at an onset potential of 1.16 (overpotential, η ≈ 697 mV), 1.2 (η ≈ 737 mV), and 1.23 V (η ≈ 767 mV) for 1 , 2 , and 3 respectively. A systematic variation of the ligand scaffold has been found to display a profound effect on the rate of electrocatalytic oxygen evolution. The results of the theoretical (density functional theory) studies show the stepwise ligand-centered oxidation process and the formation of the O-O bond during water oxidation passes through the water nucleophilic attack for all the copper complexes. At pH = 13, the turnover frequencies have been experimentally obtained as 88, 1462, and 10 s-1 (peak current measurements) for complexes 1 , 2 , and 3 , respectively. Production of oxygen gas during controlled potential electrolysis was detected by gas chromatography.- Published
- 2024
- Full Text
- View/download PDF
34. High prevalence of CD44 and its ligand low molecular weight hyaluronan in plasma of HNSCC patients: clinical significance.
- Author
-
Roy R, Chatterjee N, Khan MS, Sultana F, Roy A, Naskar S, Guha R, Sen S, Chakrabarti J, Chatterjee BP, Panda CK, and Dutta S
- Subjects
- Humans, Clinical Relevance, Prevalence, Ligands, Molecular Weight, Squamous Cell Carcinoma of Head and Neck, RNA, Messenger, Biomarkers, Hyaluronan Receptors genetics, Hyaluronic Acid, Head and Neck Neoplasms genetics
- Abstract
Background: This study aims to evaluate the role of cancer stem cell marker, CD44, and its ligand HA as potential molecular biomarker for early detection of HNSCC., Methods and Results: The expression profile (mRNA/Protein) of CD44 variants were analysed in primary HNSCC lesions and plasma of the patients. Then, prevalence of HA variants was analysed in plasma of the patients. The mRNA expression of CD44 variants, CD44S and CD44v3, were significantly high in both early (stage I/II) and late (stage III/IV) invasive lesions, with predominant expression of CD44v3 in the late-stage lesions. In plasma of HNSCC patients, increased levels of SolCD44, CD44-ICD and unique 62 KD CD44 variants with respect to standard CD44S were seen, in comparison to their prevalence in plasma of normal individuals. The abundance of CD44-ICD and 62 KD variants were significantly high in plasma of late stage HNSCC patients. Interestingly, significantly high level of low molecular weight HA(LMW HA) with respect to high molecular weight HA(HMW HA) was seen in plasma of HNSCC patients irrespective of clinical stages. On the contrary, high HMW HA level in plasma of normal individuals was seen. The high level of LMW HA in plasma of HNSCC patients might be due to combinatorial effect of increased mRNA expression of HA synthesizing enzyme HAS1/2/3 and HA degrading enzyme HYAL1/2, as seen in the primary HNSCC samples., Conclusion: Thus, our data revealed the importance of specific CD44 and HA variants in plasma of HNSCC patients during its development as potential non-invasive molecular biomarker of the disease., (© 2024. The Author(s), under exclusive licence to Springer Nature B.V.)
- Published
- 2024
- Full Text
- View/download PDF
35. Distribution of Infectious Disease Outbreaks in India before and after the COVID-19 Pandemic: Analysis of National Weekly Surveillance Data.
- Author
-
Agiwal V, Chaudhuri S, and Naskar S
- Subjects
- Humans, India epidemiology, Pandemics, Communicable Diseases epidemiology, Population Surveillance methods, COVID-19 epidemiology, Disease Outbreaks, SARS-CoV-2
- Abstract
Abstract: National surveillance data were collected to study the outbreak trends of infectious diseases/syndromes before and during the COVID-19 pandemic period, spanning from 2018 to 2022. The study found that out of 4208 outbreaks, 2972 occurred before the COVID-19 period, affecting 147,425 people, while 1236 outbreaks affected 52,324 people during the pandemic. The number of outbreaks for diseases such as acute flaccid paralysis, fever with rashes, leptospirosis, rabies, and scrub typhus increased during the pandemic. The geographic distribution of outbreaks remained similar for some reemerging diseases in both periods. The trends for dengue, Japanese encephalitis, and cholera remained consistent with peaks mostly from July to September in both periods. We observed a considerable reduction in morbidity and mortality due to outbreaks in India during the pandemic. Despite similar distributional patterns, the study indicates a strong suspicion of persistent outbreak-initiating factors, necessitating an efficient and vigilant surveillance system in the country., (Copyright © 2024 Copyright: © 2024 Indian Journal of Public Health.)
- Published
- 2024
- Full Text
- View/download PDF
36. Identification of TNF-α as Major Susceptible Risk Locus for Vitiligo: A Systematic Review and Meta-Analysis Study in the Asian Population.
- Author
-
Dutta T, Sengupta S, Adhya S, Saha A, Sengupta D, Mondal R, Naskar S, Bhattacharjee S, and Sengupta M
- Subjects
- Humans, Genetic Predisposition to Disease, Polymorphism, Single Nucleotide, Asian People genetics, Tumor Necrosis Factor-alpha genetics, Vitiligo genetics
- Abstract
Introduction: Vitiligo is a common depigmentation disorder characterized by defined white patches on the skin and affecting around 0.5% to 2% of the general population. Genetic association studies have identified several pre-disposing genes and single nucleotide polymorphisms (SNPs) for vitiligo pathogenesis; nonetheless, the reports are often conflicting and rarely conclusive. This comprehensive meta-analysis study was designed to evaluate the effect of the risk variants on vitiligo aetiology and covariate stratified vitiligo risk in the Asian population, considering all the studies published so far., Methods: We followed a systematic and comprehensive search to identify the relevant vitiligo-related candidate gene association studies in PubMed using specific keywords. After data extraction, we calculated, for the variants involved, the study-level unadjusted odds ratio, standard errors, and 95% confidence intervals by using logistic regression with additive, dominant effect, and recessive models using R software package (R, 3.4.2) "metafor." Subgroup analysis was performed using logistic regression (generalized linear model; "glm") of disease status on subgroup-specific genotype counts. For a better understanding of the likely biological function of vitiligo-associated variant obtained through the meta-analysis, in silico functional analyses, through standard publicly available web tools, were also conducted., Results: Thirty-one vitiligo-associated case-control studies on eleven SNPs were analysed in our study. In the fixed-effect meta-analysis, one variant upstream of TNF-α gene: rs1800629 was found to be associated with vitiligo risk in the additive (p = 4.26E-06), dominant (p = 1.65E-7), and recessive (p = 0.000453) models. After Benjamini-Hochberg false discovery rate (FDR) correction, rs1800629/TNF-α was found to be significant at 5% FDR in the dominant (padj = 1.82E-6) and recessive models (padj = 0.0049). In silico characterization revealed the prioritized variant to be regulatory in nature and thus having potential to contribute towards vitiligo pathogenesis., Conclusion: Our study constitutes the first comprehensive meta-analysis of candidate gene-based association studies reported in the whole of the Asian population, followed by an in silico analysis of the vitiligo-associated variant. According to the findings of our study, TNF-α single nucleotide variant rs1800629G>A has a risk association, potentially contributing to vitiligo pathogenesis in the Asian population., (© 2024 S. Karger AG, Basel.)
- Published
- 2024
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.