47 results on '"HYUN-WOO KIM"'
Search Results
2. Effective descriptor extraction strategies for correspondence matching in coronary angiography images
- Author
-
Hyun-Woo Kim, Soon-Cheol Noh, Sun-Hwa Kim, Hyun-Wook Chu, Chung-Hwan Jung, and Si-Hyuck Kang
- Subjects
Medicine ,Science - Abstract
Abstract The importance of 3D reconstruction of coronary arteries using multiple coronary angiography (CAG) images has been increasingly recognized in the field of cardiovascular disease management. This process relies on the camera matrix’s optimization, needing correspondence info for identical point positions across two images. Therefore, an automatic method for determining correspondence between two CAG images is highly desirable. Despite this need, there is a paucity of research focusing on image matching in the CAG images. Additionally, standard deep learning image matching techniques often degrade due to unique features and noise in CAG images. This study aims to fill this gap by applying a deep learning-based image matching method specifically tailored for the CAG images. We have improved the structure of our point detector and redesigned loss function to better handle sparse labeling and indistinct local features specific to CAG images. Our method include changes to training loss and introduction of a multi-head descriptor structure leading to an approximate 6% improvement. We anticipate that our work will provide valuable insights into adapting techniques from general domains to more specialized ones like medical imaging and serve as an improved benchmark for future endeavors in X-ray image-based correspondence matching.
- Published
- 2024
- Full Text
- View/download PDF
3. Clinical features and outcomes of posterior reversible encephalopathy syndrome after heart transplantation: a case series
- Author
-
Ji Hoon Lim, Seok Hyun Kim, Cheolyong Mo, Hyun-Woo Kim, and Soo Yong Lee
- Subjects
posterior reversible encephalopathy syndrome ,calcineurin inhibitors ,heart transplantation ,case report ,Specialties of internal medicine ,RC581-951 ,Surgery ,RD1-811 - Abstract
Posterior reversible encephalopathy syndrome (PRES) is a rare neurological disease that may be associated with hypertension, autoregulatory failure, and the use of calcineurin inhibitors following heart transplantation (HT). In this article, we present a case series of PRES, discussing its potential causes and management strategies. Among the 126 HT recipients at our hospital, four were diagnosed with PRES. Three of these patients developed PRES within 7 days after HT. Prior to the onset of PRES, all patients experienced sustained hypertension, and strict blood pressure (BP) control was maintained. Three of the four patients recovered without PRES recurrence, while one patient died of sepsis after an episode of altered consciousness. Hypertension was observed in all patients prior to the onset of PRES, and the majority experienced symptom improvement with BP control. While most cases of PRES were reversible with conservative treatment, including the administration of antiepileptics, one irreversible case resulted in in-hospital mortality. Thus, PRES can have serious outcomes and is not invariably benign.
- Published
- 2024
- Full Text
- View/download PDF
4. Seasonal and Weekly Patterns of Korean Adolescents’ Web Search Activity on Insomnia: Retrospective Study
- Author
-
Kwangyeol Baek, Jake Jeong, Hyun-Woo Kim, Dong-Hyeon Shin, Jiyoung Kim, Gha-Hyun Lee, and Jae Wook Cho
- Subjects
Medicine - Abstract
BackgroundSleep deprivation in adolescents is a common but serious public health issue. Adolescents often have a progressive circadian delay and suffer from insufficient sleep during weekdays due to the school schedule. Temporal patterns in internet search activity data can provide relevant information for understanding the characteristic sleep problems of the adolescent population. ObjectiveWe aimed to reveal whether adolescents exhibit distinct temporal seasonal and weekly patterns in internet search activity on insomnia compared to adults. MethodsWe hypothesized that adolescents exhibit larger variations in the internet search volume for insomnia, particularly in association with the school schedule (e.g., academic vacations and weekends). We extracted the daily search volume for insomnia in South Korean adolescents (13-18 years old), adults (19-59 years old), and young adults (19-24 years old) during the years 2016-2019 using NAVER DataLab, the most popular search engine in South Korea. The daily search volume data for each group were normalized with the annual median of each group. The time series of the search volume was decomposed into slow fluctuation (over a year) and fast fluctuation (within a week) using fast Fourier transform. Next, we compared the normalized search volume across months in a year (slow fluctuation) and days in a week (fast fluctuation). ResultsIn the annual trend, 2-way ANOVA revealed a significant (group) × (month) interaction (P
- Published
- 2024
- Full Text
- View/download PDF
5. Fragile futures: Evaluating habitat and climate change response of hog badgers (Mustelidae: Arctonyx) in the conservation landscape of mainland Asia
- Author
-
Imon Abedin, Tanoy Mukherjee, Ah Ran Kim, Soo Rin Lee, Hyun‐Woo Kim, and Shantanu Kundu
- Subjects
conservation priorities ,global warming ,habitat suitability ,mainland Asia ,Mammalia ,species distribution model ,Ecology ,QH540-549.5 - Abstract
Abstract The small mammalian fauna plays pivotal roles in ecosystem dynamics and as crucial biodiversity indicators. However, recent research has raised concerns about the decline of mammalian species due to climate change. Consequently, significant attention is directed toward studying various big flagship mammalian species for conservation. However, small mammals such as the hog badgers (Mustelidae: Arctonyx) remain understudied regarding the impacts of climate change in Asia. The present study offers a comprehensive analysis of climate change effects on two mainland hog badger species, utilizing ensemble species distribution modeling. Findings reveal concerning outcomes, as only 52% of the IUCN extent is deemed suitable for the Great Hog Badger (Arctonyx collaris) and a mere 17% is ideal for the Northern Hog Badger (Arctonyx albogularis). Notably, projections suggest a potential reduction of over 26% in suitable areas for both species under future climate scenarios, with the most severe decline anticipated in the high‐emission scenario of SSP585. These declines translate into evident habitat fragmentation, particularly impacting A. collaris, whose patches shrink substantially, contrasting with the relatively stable patches of A. albogularis. However, despite their differences, niche overlap analysis reveals an intriguing increase in overlap between the two species, indicating potential ecological shifts. The study underscores the importance of integrating climate change and habitat fragmentation considerations into conservation strategies, urging a reassessment of the IUCN status of A. albogularis. The insights gained from this research are crucial for improving protection measures by ensuring adequate legal safeguards and maintaining ecological corridors between viable habitat patches, which are essential for the conservation of hog badgers across mainland Asia. Furthermore, emphasizing the urgency of proactive efforts, particularly in countries with suitable habitats can help safeguard these small mammalian species and their ecosystems from the detrimental impacts of climate change.
- Published
- 2024
- Full Text
- View/download PDF
6. Exploring the Smoking-Epilepsy Nexus: a systematic review and meta-analysis of observational studies
- Author
-
Yerin Kang, Sieun Kim, Yunah Jung, Dai Sik Ko, Hyun-Woo Kim, Jung-Pil Yoon, Sunghwan Cho, Tae-Jin Song, Kihun Kim, Eunjeong Son, and Yun Hak Kim
- Subjects
Smoking ,Nicotine ,Epilepsy ,Seizure ,Systematic review ,Meta-analysis ,Medicine - Abstract
Abstract Background Epilepsy, characterized by recurrent unprovoked seizures, poses significant challenges to affected individuals globally. While several established risk factors for epilepsy exist, the association with cigarette smoking remains debated. This study aims to conduct systematic review and meta-analysis to elucidate the potential association between smoking and the likelihood of epilepsy. Methods The search was performed on March 31st, 2023, using the Medline, Embase, Web of Science, Scopus, and ScienceDirect. We included cohort, cross-sectional, and case–control studies in our meta-analysis, conducting subgroup analyses based on smoking history, sex, and epilepsy type to yield specific insights. Results We identified 2550 studies, of which 17 studies were finally included in this study. The pooled odds ratio of epilepsy was 1.14 (0.96–1.36) in smokers compared to non-smokers. In current smokers compared to non-smokers, the odds ratio was 1.46 (1.13–1.89), while, in former smokers compared to non-smokers, the odds ratio was 1.14 (0.83–1.56). Conclusions While the overall association between smoking and epilepsy did not reach statistical significance, a notable association was found among current smokers. The study emphasizes the importance of smoking cessation as a potential preventive measure against epilepsy, especially given the proconvulsive effects of nicotine. Future research should address limitations and explore specific clinical scenarios to enhance our understanding of the complex relationship between cigarette use and epilepsy. Systematic review registration CRD42022342510.
- Published
- 2024
- Full Text
- View/download PDF
7. Exploring fish communities in the mud volcano polluted river using environmental DNA metabarcoding
- Author
-
Firli Rahmah Primula Dewi, Hyun-Woo Kim, Ah Ran Kim, Soo Rin Lee, Amy Yee-Hui Then, Mochammad Zamroni, Flandrianto Sih Palimirmo, Henny Trie Wahyuni, and Muhammad Hilman Fu'adil Amin
- Subjects
environmental DNA metabarcoding ,Fish communities ,Mud-volcano ,Pollution ,Environmental sciences ,GE1-350 - Abstract
In ecosystems subjected to environmental disturbances such as mud volcanoes, understanding the dynamics of fish communities is essential for ecological assessment and conservation. This study employs environmental DNA (eDNA) metabarcoding for the first time to explore fish communities within a challenging and unique environment—a mud volcano-polluted river. High-throughput sequencing was utilized to assess alpha and beta diversity, revealing distinct patterns in fish community composition in response to mud discharge activity. The results indicate that affected sites exhibit remarkably different communities during active and inactive mud discharge, with the impact extending downstream to the river mouth. Notably, the application of eDNA metabarcoding identified a vulnerable species, Rasbora lateristriata, emphasizing its utility in detecting high-risk species. Despite challenges in species identification and reference databases, the use of longer 16S rRNA fragments offered enhanced taxonomic resolution and interspecific sequence variation. This approach showcases the potential of eDNA metabarcoding in assessing fish diversity and community dynamics in polluted aquatic ecosystems, emphasizing its significance in biodiversity surveys and ecological monitoring. The study underscores the value of eDNA metabarcoding as an efficient and comprehensive tool for studying freshwater ecosystems and highlights the need for expanding reference databases to address genetic coverage gaps, particularly in less-studied environments.
- Published
- 2024
- Full Text
- View/download PDF
8. Analyzing microbial communities and metabolic functions in estuaries affected by human activity to uncover bioelectrochemical system potential
- Author
-
Muhammad Hilman Fu'adil Amin, Hyun-Woo Kim, Kyunghoi Kim, Febri Eko Wahyudianto, Wahid Dianbudiyanto, and Nur Indradewi Oktavitri
- Subjects
16S rDNA ,Estuaries ,Microbial communities ,Pollution ,Predictive metagenomic ,Renewable energy ,Environmental sciences ,GE1-350 - Abstract
In the context of bioelectrochemical systems (BES), a profound understanding of the taxonomic composition within indigenous microbial communities is crucial. Their metabolic versatility assumes a foundational role in dictating the functionality of BES, yielding diverse applications for bioenergy production and bioremediation in anthropogenically impacted estuaries. Employing high-throughput sequencing of the V3-V4 region of 16S rRNA and predictive metagenomic analyses of three different estuaries samples (eutrophicated urban reservoir, mud volcano impacted river, and its river mouth), this study delves into the intricate interplay between these communities and their metabolic functions in response to human-induced perturbations, with a specific focus on their applicability to BES. Our findings illuminate remarkable distinctions among the three samples, manifesting in variations in microbial composition and functional metabolic pathways within the respective ecosystems. The mud volcano-affected river, characterized by the highest microbial diversity, exhibited the most diverse array of functional metabolic processes, prominently dominated by chemoheterotrophy (67.43%). In contrast, the river mouth displayed a distinct penchant for autotrophy (33.33%). The eutrophicated urban reservoir showcased a balanced coexistence of chemoheterotrophy (41.18%) and autotrophy (35.29%). Regarding metabolic potential for BES application, most of metabolism potential were associated with anodic activity, while cathodic activity was restricted to autotrophy and its relatives. The results suggested that the microbial communities anthropogenically impacted estuaries were potentially used for anodic and cathodic reactions in BES as electrogens to generate bioelectricity and reduce of pollutants.
- Published
- 2024
- Full Text
- View/download PDF
9. Unraveling the unknown: Adaptive spatial planning to enhance climate resilience for the endangered Swamp Grass-babbler (Laticilla cinerascens) with habitat connectivity and complexity approach
- Author
-
Imon Abedin, Tanoy Mukherjee, Hye-Eun Kang, Tae-Ho Yoon, Hyun-Woo Kim, and Shantanu Kundu
- Subjects
Babblers ,Habitat loss ,Biological corridors ,Landscape fragmentation ,Northeast India ,Shape complexity ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
The endangered and poorly known Swamp Grass-babbler, Laticilla cinerascens (Passeriformes: Pellorneidae), confronts critical threats and vulnerability due to its specific habitat requirements and restricted populations in the northeastern region of the Indian Subcontinent. This study investigates the distribution of the species, habitat quality, geometry and shape complexity of connectivity among the protected areas (PAs), and responses to climate change in Northeast India under different climate change pathways by utilizing ensemble distribution models, and ecological metrics. From the total distribution extent (1,42,000 km2), approximately 9366 km2 (6.59 %) is identified as the suitable habitat for this threatened species. Historically centered around Dibru Saikhowa National Park (DSNP), the species faced a drastic decline due to anthropogenic activities and alteration in land use and lover cover. The study also reveals a significant decline in suitable habitat for L. cinerascens in future climate scenarios, with alarming reductions under SSP126 (>10 % in the timeframe 2041–2060 and > 30 % from 2061 to 2080), SSP245 (>90 % in both time periods), and SSP585 (>90 % in both timeframes) from the present scenario. At present, DSNP has the most suitable habitat within the distribution range but is projected to decline (>90 %) under more severe climate change scenarios, as observed in other PAs. Landscape fragmentation analysis indicates a shift in habitat geometry, highlighting the intricate impact of climate change. It predicts a substantial 343 % increase (in the SSP126) in small habitat patches in the future. Connectivity analysis among PAs shows a significant shift, with a decline exceeding 20 %. The analysis of shape complexity and connectivity geometry reveals a significant increase of over 220 % in the fragmentation of connectivity among PAs between 2061 and 2080 under the SSP585 climate change scenario compared to the present conditions. The study underscores the urgent need for conservation actions, emphasizing the complex interplay of climate change, habitat suitability, and fragmentation. Prioritizing PAs with suitable habitats and assessing their connectivity is crucial. Adaptive management strategies are essential to address ongoing environmental changes and safeguard biodiversity. Future research in critical areas is needed to establish long-term monitoring programs to lead/extend effective conservation strategies.
- Published
- 2024
- Full Text
- View/download PDF
10. Mitochondrial DNA-based investigation of dead rorqual (Cetacea: Balaenopteridae) from the west coast of India
- Author
-
Shantanu Kundu, Manokaran Kamalakannan, Dhriti Banerjee, Flandrianto Sih Palimirmo, Arif Wibowo, and Hyun-Woo Kim
- Subjects
Indian Ocean ,Cetaceans ,Matrilineal phylogeny ,Important Marine Mammal Areas (IMMAs) ,Conservation ,Aquaculture. Fisheries. Angling ,SH1-691 - Abstract
The study assessed the utility of mitochondrial DNA for identifying a deceased rorqual discovered off the western coast of India. Both the COI and Cytb genes exhibited remarkable 99-100% similarity with the GenBank sequence of Balaenoptera musculus through a global BLAST search, confirming their affiliation with this species. Inter-species genetic distances for COI and Cytb genes ranged from 6.75% to 9.80% and 7.37% to 10.96% respectively, compared with other Balaenopteridae species. The Bayesian phylogenies constructed based on both COI and Cytb genes demonstrated clear and separate clustering for all Balaenopteridae species, further reaffirming their distinctiveness, while concurrently revealing a cohesive clustering pattern of the generated sequences within the B. musculus clade. Beyond species confirmation, this study provides valuable insights into the presence of live and deceased B. musculus individuals within Indian marine ecosystems. This information holds significant potential for guiding conservation efforts aimed at safeguarding Important Marine Mammal Areas (IMMAs) in India over the long term.
- Published
- 2024
- Full Text
- View/download PDF
11. Association of smoking with amyotrophic lateral sclerosis: A systematic review, and meta-analysis, including dose-response analysis
- Author
-
Kihun Kim<sup>+, Dai Sik Ko<sup>+, Jin-Woo Kim, Dongjun Lee, Eunjeong Son, Hyun-Woo Kim, Tae-Jin Song<sup>+, and Yun Hak Kim
- Subjects
smoking ,systematic review ,meta-analysis ,amyotrophic lateral sclerosis ,dose-response analysis ,Diseases of the respiratory system ,RC705-779 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Introduction Amyotrophic lateral sclerosis (ALS) is a progressive neurodegenerative disorder primarily affecting the voluntary motor nervous system. Several observational studies have provided conflicting results regarding the association between smoking and ALS. Therefore, Therefore, our objective was to investigate this association through systematic review, meta-analysis, and dose-response analysis. Methods On January 16th, 2023, we initially extracted records from medical databases, which included Medline, Embase, Web of Science, Scopus, and ScienceDirect. We included case-control and cohort studies as eligible studies. Subgroup analyses were performed based on sex, study design, and current smoking. Restricted cubic spline analysis was utilized to assess the dose-response relationship between smoking (pack-year) and ALS. Results Twenty-eight case-control and four cohort studies met the inclusion criteria. The unadjusted OR for the overall association between smoking and ALS was 1.14 (95% CI: 1.06-1.22, I2=44%, p
- Published
- 2024
- Full Text
- View/download PDF
12. Mitogenomic Architecture of Atlantic Emperor Lethrinus atlanticus (Actinopterygii: Spariformes): Insights into the Lineage Diversification in Atlantic Ocean
- Author
-
Shantanu Kundu, Hye-Eun Kang, Yunji Go, Gyurim Bang, Yengju Jang, Hsu Htoo, Sarifah Aini, and Hyun-Woo Kim
- Subjects
marine fish ,mitogenome ,phylogeny ,lineage diversification ,evolution ,oceanology ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
The evolutionary history of emperors, particularly in the Atlantic and Indo-West Pacific Oceans, remains largely unmapped. This study explores the maternal lineage evolution of Lethrinids by examining the complete mitogenome of Lethrinus atlanticus, which is endemic to the Eastern Atlantic Ocean. Utilizing advanced next-generation sequencing, we found that the mitogenome spans 16,789 base pairs and encompasses 37 genes, including 13 protein-coding genes (PCGs), two ribosomal RNAs, 22 transfer RNAs, and an AT-rich control region (CR). Our analysis indicates a preference for AT base pairs in the L. atlanticus mitogenome (53.10%). Most PCGs begin with the ATG codon, except for COI, which starts with GTG. Relative synonymous codon usage reveals high frequencies for alanine, leucine, proline, serine, and threonine. The ratio of nonsynonymous to synonymous substitutions suggests strong negative selection across all PCGs in Lethrinus species. Most transfer RNAs exhibit typical cloverleaf structures, with the exception of tRNA-serine (GCT), which lacks a dihydrouracil stem. Comparative analysis of conserved sequence blocks across the CRs of three Lethrinus species shows notable differences in length and nucleotide composition. Phylogenetic analysis using concatenated PCGs clearly distinguishes all Lethrinus species, including L. atlanticus, and sheds light on the evolutionary relationships among Spariformes species. The estimated divergence time of approximately 20.67 million years between L. atlanticus and its Indo-West Pacific relatives provides insights into their historical separation and colonization during the late Oligocene. The distribution of Lethrinids may be influenced by ocean currents and ecological factors, potentially leading to their speciation across the Eastern Atlantic and Indo-West Pacific. This study enhances our understanding of the genetic diversity and phylogenetic relationships within Lethrinus species. Further exploration of other emperor fish mitogenomes and comprehensive genomic data could provide vital insights into their genetic makeup, evolutionary history, and environmental adaptability in marine ecosystems globally.
- Published
- 2024
- Full Text
- View/download PDF
13. Habitat Loss in the IUCN Extent: Climate Change-Induced Threat on the Red Goral (Naemorhedus baileyi) in the Temperate Mountains of South Asia
- Author
-
Imon Abedin, Tanoy Mukherjee, Joynal Abedin, Hyun-Woo Kim, and Shantanu Kundu
- Subjects
artiodactyla ,ecological niche ,global warming ,international conservation ,threatened species ,transboundary PAs ,Biology (General) ,QH301-705.5 - Abstract
Climate change has severely impacted many species, causing rapid declines or extinctions within their essential ecological niches. This deterioration is expected to worsen, particularly in remote high-altitude regions like the Himalayas, which are home to diverse flora and fauna, including many mountainous ungulates. Unfortunately, many of these species lack adaptive strategies to cope with novel climatic conditions. The Red Goral (Naemorhedus baileyi) is a cliff-dwelling species classified as “Vulnerable” by the IUCN due to its small population and restricted range extent. This species has the most restricted range of all goral species, residing in the temperate mountains of northeastern India, northern Myanmar, and China. Given its restricted range and small population, this species is highly threatened by climate change and habitat disruptions, making habitat mapping and modeling crucial for effective conservation. This study employs an ensemble approach (BRT, GLM, MARS, and MaxEnt) in species distribution modeling to assess the distribution, habitat suitability, and connectivity of this species, addressing critical gaps in its understanding. The findings reveal deeply concerning trends, as the model identified only 21,363 km2 (13.01%) of the total IUCN extent as suitable habitat under current conditions. This limited extent is alarming, as it leaves the species with very little refuge to thrive. Furthermore, this situation is compounded by the fact that only around 22.29% of this identified suitable habitat falls within protected areas (PAs), further constraining the species’ ability to survive in a protected landscape. The future projections paint even degraded scenarios, with a predicted decline of over 34% and excessive fragmentation in suitable habitat extent. In addition, the present study identifies precipitation seasonality and elevation as the primary contributing predictors to the distribution of this species. Furthermore, the study identifies nine designated transboundary PAs within the IUCN extent of the Red Goral and the connectivity among them to highlight the crucial role in supporting the species’ survival over time. Moreover, the Dibang Wildlife Sanctuary (DWLS) and Hkakaborazi National Park are revealed as the PAs with the largest extent of suitable habitat in the present scenario. Furthermore, the highest mean connectivity was found between DWLS and Mehao Wildlife Sanctuary (0.0583), while the lowest connectivity was observed between Kamlang Wildlife Sanctuary and Namdapha National Park (0.0172). The study also suggests strategic management planning that is a vital foundation for future research and conservation initiatives, aiming to ensure the long-term survival of the species in its natural habitat.
- Published
- 2024
- Full Text
- View/download PDF
14. A literature review of bioactive substances for the treatment of periodontitis: In vitro, in vivo and clinical studies
- Author
-
Tae-Hee Kim, Seong-Yeong Heo, Pathum Chandika, Young-Mog Kim, Hyun-Woo Kim, Hyun Wook Kang, Jae-Young Je, Zhong-Ji Qian, Namwon Kim, and Won-Kyo Jung
- Subjects
Human gingival fibroblasts ,Periodontitis ,Bioactive substances ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
Periodontitis is a common chronic inflammatory disease of the supporting tissues of the tooth that involves a complex interaction of microorganisms and various cell lines around the infected site. To prevent and treat this disease, several options are available, such as scaling, root planning, antibiotic treatment, and dental surgeries, depending on the stage of the disease. However, these treatments can have various side effects, including additional inflammatory responses, chronic wounds, and the need for secondary surgery. Consequently, numerous studies have focused on developing new therapeutic agents for more effective periodontitis treatment. This review explores the latest trends in bioactive substances with therapeutic effects for periodontitis using various search engines. Therefore, this study aimed to suggest effective directions for therapeutic approaches. Additionally, we provide a summary of the current applications and underlying mechanisms of bioactive substances, which can serve as a reference for the development of periodontitis treatments.
- Published
- 2024
- Full Text
- View/download PDF
15. Distribution Model Reveals Rapid Decline in Habitat Extent for Endangered Hispid Hare: Implications for Wildlife Management and Conservation Planning in Future Climate Change Scenarios
- Author
-
Imon Abedin, Tanoy Mukherjee, Ah Ran Kim, Hyun-Woo Kim, Hye-Eun Kang, and Shantanu Kundu
- Subjects
lagomorphs ,species distribution modelling ,protected area planning ,transboundary ,climate change ,Biology (General) ,QH301-705.5 - Abstract
The hispid hare, Caprolagus hispidus, belonging to the family Leporidae is a small grassland mammal found in the southern foothills of the Himalayas, in India, Nepal, and Bhutan. Despite having an endangered status according to the IUCN Red List, it lacks studies on its distribution and is threatened by habitat loss and land cover changes. Thus, the present study attempted to assess the habitat suitability using the species distribution model approach for the first time and projected its future in response to climate change, habitat, and urbanization factors. The results revealed that out of the total geographical extent of 188,316 km2, only 11,374 km2 (6.03%) were identified as suitable habitat for this species. The results also revealed that habitat significantly declined across its range (>60%) under certain climate change scenarios. Moreover, in the present climate scenario protected areas such as Shuklaphanta National Park (0.837) in Nepal exhibited the highest mean extent of habitat whereas, in India, Dibru-Saikhowa National Park (0.631) is found to be the most suitable habitat. Notably, two protected areas in Uttarakhand, India, specifically Corbett National Park (0.530) and Sonanandi Wildlife Sanctuary (0.423), have also demonstrated suitable habitats for C. hispidus. Given that protected areas showing a future rise in habitat suitability might also be regarded as potential sites for species translocation, this study underscores the importance of implementing proactive conservation strategies to mitigate the adverse impacts of climate change on this species. It is essential to prioritize habitat restoration, focused protection measures, and further species-level ecological exploration to address these challenges effectively. Furthermore, fostering transboundary collaboration and coordinated conservation actions between nations is crucial to safeguarding the long-term survival of the species throughout its distribution range.
- Published
- 2024
- Full Text
- View/download PDF
16. Three-Dimensional Image Visualization under Photon-Starved Conditions Using N Observations and Statistical Estimation
- Author
-
Hyun-Woo Kim, Min-Chul Lee, and Myungjin Cho
- Subjects
maximum likelihood estimation ,N observations ,photon-counting integral imaging ,three-dimensional imaging ,volumetric computational reconstruction ,Chemical technology ,TP1-1185 - Abstract
In this paper, we propose a method for the three-dimensional (3D) image visualization of objects under photon-starved conditions using multiple observations and statistical estimation. To visualize 3D objects under these conditions, photon counting integral imaging was used, which can extract photons from 3D objects using the Poisson random process. However, this process may not reconstruct 3D images under severely photon-starved conditions due to a lack of photons. Therefore, to solve this problem, in this paper, we propose N-observation photon-counting integral imaging with statistical estimation. Since photons are extracted randomly using the Poisson distribution, increasing the samples of photons can improve the accuracy of photon extraction. In addition, by using a statistical estimation method, such as maximum likelihood estimation, 3D images can be reconstructed. To prove our proposed method, we implemented the optical experiment and calculated its performance metrics, which included the peak signal-to-noise ratio (PSNR), structural similarity (SSIM), peak-to-correlation energy (PCE), and the peak sidelobe ratio (PSR).
- Published
- 2024
- Full Text
- View/download PDF
17. Image Processing Techniques for Improving Quality of 3D Profile in Digital Holographic Microscopy Using Deep Learning Algorithm
- Author
-
Hyun-Woo Kim, Myungjin Cho, and Min-Chul Lee
- Subjects
Digital Holographic Microscopy (DHM) ,Improved Denoising Diffusion Probabilistic Models (IDDPM) ,noise filtering ,Chemical technology ,TP1-1185 - Abstract
Digital Holographic Microscopy (DHM) is a 3D imaging technology widely applied in biology, microelectronics, and medical research. However, the noise generated during the 3D imaging process can affect the accuracy of medical diagnoses. To solve this problem, we proposed several frequency domain filtering algorithms. However, the filtering algorithms we proposed have a limitation in that they can only be applied when the distance between the direct current (DC) spectrum and sidebands are sufficiently far. To address these limitations, among the proposed filtering algorithms, the HiVA algorithm and deep learning algorithm, which effectively filter by distinguishing between noise and detailed information of the object, are used to enable filtering regardless of the distance between the DC spectrum and sidebands. In this paper, a combination of deep learning technology and traditional image processing methods is proposed, aiming to reduce noise in 3D profile imaging using the Improved Denoising Diffusion Probabilistic Models (IDDPM) algorithm.
- Published
- 2024
- Full Text
- View/download PDF
18. Integrative Taxonomy Clarifies the Historical Flaws in the Systematics and Distributions of Two Osteobrama Fishes (Cypriniformes: Cyprinidae) in India
- Author
-
Boni Amin Laskar, Dhriti Banerjee, Sangdeok Chung, Hyun-Woo Kim, Ah Ran Kim, and Shantanu Kundu
- Subjects
cyprinids ,distribution ,genetic divergence ,key characters ,phylogeny ,systematics ,Biology (General) ,QH301-705.5 ,Genetics ,QH426-470 - Abstract
The taxonomy and geographical distributions of Osteobrama species have historically posed challenges to ichthyologists, leading to uncertainties regarding their native ranges. While traditional taxonomy has proven valuable in classification, the utility of an integrated approach is restricted for this particular group due to limitations in combining information from biogeography, morphology, and genetic data. This study addresses the taxonomic puzzle arising from the recent identification of Osteobrama tikarpadaensis in the Mahanadi and Godavari Rivers, casting doubt on the actual distribution and systematics of both O. tikarpadaensis and Osteobrama vigorsii. The research reveals distinctions among specimens resembling O. vigorsii from the Krishna and Godavari riverine systems. Notably, specimens identified as O. vigorsii from the Indian Museum exhibit two pairs of barbels, while those from the Godavari River in this study are identified as O. tikarpadaensis. Inter-species genetic divergence and maximum likelihood phylogeny provide clear delineation between O. vigorsii and O. tikarpadaensis. The study suggests that O. vigorsii may be limited to the Krishna River system in southern India, while O. tikarpadaensis could potentially extend from the Mahanadi River in central India to the Godavari River in southern India. Proposed revision to morphological features for both species, accompanied by revised taxonomic keys, aim to facilitate accurate differentiation among Osteobrama congeners. The data generated by this research provide a resource for future systematic investigations into cyprinids in India and surrounding regions. Further, the genetic diversity information obtained from various riverine systems for Osteobrama species will be instrumental in guiding aquaculture practices and formulating effective conservation action plans.
- Published
- 2024
- Full Text
- View/download PDF
19. Mitogenomic Characterization and Phylogenetic Placement of African Hind, Cephalopholis taeniops: Shedding Light on the Evolution of Groupers (Serranidae: Epinephelinae)
- Author
-
Shantanu Kundu, Hye-Eun Kang, Ah Ran Kim, Soo Rin Lee, Eun-Bi Kim, Muhammad Hilman Fu’adil Amin, Sapto Andriyono, Hyun-Woo Kim, and Kyoungmi Kang
- Subjects
serranids ,Africa ,next-generation sequencing ,mitogenome ,phylogeny ,evolution ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
The global exploration of evolutionary trends in groupers, based on mitogenomes, is currently underway. This research extensively investigates the structure of and variations in Cephalopholis species mitogenomes, along with their phylogenetic relationships, focusing specifically on Cephalopholis taeniops from the Eastern Atlantic Ocean. The generated mitogenome spans 16,572 base pairs and exhibits a gene order analogous to that of the ancestral teleost’s, featuring 13 protein-coding genes (PCGs), two ribosomal RNA genes (rRNAs), 22 transfer RNA genes (tRNAs), and an AT-rich control region. The mitogenome of C. taeniops displays an AT bias (54.99%), aligning with related species. The majority of PCGs in the mitogenome initiate with the start codon ATG, with the exceptions being COI (GTG) and atp6 (TTG). The relative synonymous codon usage analysis revealed the maximum abundance of leucine, proline, serine, and threonine. The nonsynonymous/synonymous ratios were Cephalopholis species. In C. taeniops, the prevalent transfer RNAs display conventional cloverleaf secondary structures, except for tRNA-serine (GCT), which lacks a dihydrouracil (DHU) stem. A comparative examination of conserved domains and sequence blocks across various Cephalopholis species indicates noteworthy variations in length and nucleotide diversity. Maximum likelihood, neighbor-joining, and Bayesian phylogenetic analyses, employing the concatenated PCGs and a combination of PCGs + rRNAs, distinctly separate all Cephalopholis species, including C. taeniops. Overall, these findings deepen our understanding of evolutionary relationships among serranid groupers, emphasizing the significance of structural considerations in mitogenomic analyses.
- Published
- 2024
- Full Text
- View/download PDF
20. A Monitoring System for Cattle Behavior Detection using YOLO-v8 in IoT Environments.
- Author
-
Kyungchang Jeong, Dong-Ro Kim, Jae-Hyen Ryu, Hyun-Woo Kim, Jinho Cho, Euijong Lee, and Ji-Hoon Jeong
- Published
- 2024
- Full Text
- View/download PDF
21. Masked Kinematic Continuity-aware Hierarchical Attention Network for pose estimation in videos.
- Author
-
Kyung-Min Jin, Gun-Hee Lee, Woo-Jeoung Nam, Tae-Kyung Kang, Hyun-Woo Kim, and Seong-Whan Lee
- Published
- 2024
- Full Text
- View/download PDF
22. Metaheuristics-guided active learning for optimizing reaction conditions of high-performance methane conversion.
- Author
-
Gyoung S. Na and Hyun Woo Kim 0004
- Published
- 2024
- Full Text
- View/download PDF
23. MHCanonNet: Multi-Hypothesis Canonical lifting Network for self-supervised 3D human pose estimation in the wild video.
- Author
-
Hyun-Woo Kim, Gun-Hee Lee, Woo-Jeoung Nam, Kyung-Min Jin, Tae-Kyung Kang, Geon-Jun Yang, and Seong-Whan Lee
- Published
- 2024
- Full Text
- View/download PDF
24. Biosynthesis, biological activities, and structure-activity relationships of decalin-containing tetramic acid derivatives isolated from fungi.
- Author
-
Hyun Woo Kim, Jin Woo Lee, and Sang Hee Shim
- Subjects
- *
TETRAMIC acids , *ACID derivatives , *STRUCTURE-activity relationships , *FUNGAL metabolites , *BACTERIAL genes - Abstract
Decalin-containing tetramic acid derivatives, especially 3-decalinoyltetramic acids (3-DTAs), are commonly found as fungal secondary metabolites. Numerous biological activities of this class of compounds, such as antibiotic, antiviral, antifungal, antiplasmodial, and antiprotozoal properties, have been the subject of ongoing research. For this reason, these molecules have attracted a lot of interest from the scientific community and various efforts including semi-synthesis, co-culturing with bacteria and biosynthetic gene sequencing have been made to obtain more derivatives. In this review, 3-DTAs are classified into four major groups based on the absolute configuration of the bicyclic decalin ring. Their biosynthetic pathways, various biological activities, and structure-activity relationship are then introduced. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
25. Streptomyces tagetis sp. nov., a chromomycin producing bacteria isolated from the roots of Tagetes patula.
- Author
-
Chhetri, Geeta, Myeong Ji Kim, Inhyup Kim, Tran, Duc V. H., Young-Woo Kim, Hyun Woo Kim, and Taegun Seo
- Subjects
STREPTOMYCES ,NUCLEIC acid hybridization ,MARIGOLDS ,MELANINS ,METABOLITES ,GENOME size ,AGAR - Abstract
A novel halotolerant actinobacterium, designated as RG38
T , capable of producing black extracellular melanin pigment on SP2 agar, was isolated from the roots of Tagetes patula. Comparative analysis of the 16S rRNA gene sequence revealed the highest similarity to Streptomyces collinus NBRC 12759T (99.3%). Phylogenetic analysis showed that strain RG38T clustered within the genus Streptomyces forming a monophyletic cluster with its close relatives. The average nucleotide identity (ANI), digital DNA-- DNA hybridization (dDDH), and amino-acid identity (AAI) values between strain RG38T and related species within the genus Streptomyces were below the standard threshold for prokaryotic species delineation. The DNA G + C content of the strain RG38T was determined to be 73.3%. The genome size measured 7,150,598 bp comprising 17 contigs and encompassed 6,053 protein coding genes. AntiSMASH analysis of the whole genome revealed 35 putative biosynthetic gene clusters (BGCs) responsible for various secondary metabolites. Among these clusters, two gene clusters exhibited 100% similarity to the chromomycin A3, albaflavenone, and anthracimycin, respectively. These compounds were reported to possess significant anticancer and antibacterial activities. LC--MS-based analysis, coupled with further isolation studies, confirmed the production of chromomycins A2 (1), A3 (2), and their derivatives, along with their antibiotic activities. These findings underscore the potential of this novel strain as a novel resource for the discovery of diverse antimicrobial compounds. This study is the first to report an antimicrobial compound producing Streptomyces species isolated from medicinal plant T. patula. Based on a polyphasic study, the strain RG38T isolated from an unexplored habitat with a high potential for new natural products represents a novel species within the genus Streptomyces. Accordingly, we propose the name Streptomyces tagetis sp. nov. for this novel species, with the type strain is RG38T (=KCTC 49624T = BRC 15113T ). [ABSTRACT FROM AUTHOR]- Published
- 2024
- Full Text
- View/download PDF
26. Tonic NMDAR Currents of NR2A-Containing NMDARs Represent Altered Ambient Glutamate Concentration in the Supraoptic Nucleus.
- Author
-
Hyunjin Shin, Sharma, Ramesh, Neupane, Chiranjivi, Thuy Linh Pham, Su Eun Park, So Yeong Lee, Hyun-Woo Kim, Young Min Bae, Javier E. Stern, and Jin Bong Park
- Published
- 2024
- Full Text
- View/download PDF
27. From Data Lake to Digital Twin: A Data Management Framework for BEM and BAS Interoperable Buildings.
- Author
-
Hyun Woo Kim, Mungroo, Adrian, and Jung-Ho Lewe
- Published
- 2024
28. Association of smoking with amyotrophic lateral sclerosis: A systematic review, meta-analysis, and dose-response analysis.
- Author
-
Kihun Kim, Dai Sik Ko, Jin-Woo Kim, Dongjun Lee, Eunjeong Son, Hyun-Woo Kim, Tae-Jin Song, and Yun Hak Kim
- Subjects
META-analysis ,MEDICAL information storage & retrieval systems ,CONFIDENCE intervals ,SYSTEMATIC reviews ,RISK assessment ,AMYOTROPHIC lateral sclerosis ,DESCRIPTIVE statistics ,SMOKING ,MEDLINE ,ODDS ratio ,DOSE-response relationship in biochemistry ,DISEASE risk factors ,EVALUATION - Abstract
INTRODUCTION Amyotrophic lateral sclerosis (ALS) is a progressive neurodegenerative disorder primarily affecting the voluntary motor nervous system. Several observational studies have provided conflicting results regarding the association between smoking and ALS. Therefore, our objective was to investigate this association through a systematic review, meta-analysis, and dose-response analysis. METHODS On 16 January 2023, we initially extracted records from medical databases, which included Medline, Embase, Web of Science, Scopus, and ScienceDirect. We included case-control and cohort studies as eligible studies. Subgroup analyses were performed based on sex, study design, and current smoking. Restricted cubic-spline analysis was utilized to assess the dose-response relationship between smoking (pack-years) and ALS. RESULTS Twenty-eight case-control and four cohort studies met the inclusion criteria. The unadjusted OR for the overall association between smoking and ALS was 1.14 (95% CI: 1.06--1.22, I2=44%, p<0.001), and the adjusted OR (AOR) was 1.12 (95% CI: 1.03--1.21, I2=49%, p=0.009). Subgroup analysis revealed a more pronounced association among current smokers, with an AOR of 1.28 (95% CI: 1.10--1.49, I2=66%, p<0.001) and AOR of 1.28 (95% CI: 1.10--1.48, I2=58%, p=0.001). In the dose-response analysis, the non-linear model revealed an inverted U-shaped curve. CONCLUSIONS Our study provides evidence of a positive relationship between smoking and the risk of ALS. To mitigate the risk of developing ALS, discontinuing smoking, which is a modifiable risk factor, may be crucial. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
29. Elaboration of dimensional quality in 3D-printed food: Key factors in process steps.
- Author
-
Yaxin Wen, Quang Tuan Che, Shaoyun Wang, Hyun Jin Park, and Hyun Woo Kim
- Subjects
FOOD quality ,RHEOLOGY ,SURFACE roughness ,3-D printers ,THREE-dimensional printing - Abstract
Three-dimensional (3D) printing has been applied to produce food products with intricate and fancy shapes. Dimensional quality, such as dimensional stability, surface smoothness, shape fidelity, and resolution, are essential for the attractive appearance of 3D-printed food. Various methods have been extensively studied and proposed to control the dimensional quality of printed foods, but few papers focused on comprehensively and deeply summarizing the key factors of the dimensional quality of printed products at each stage--before, during, and after printing--of the 3D printing process. Therefore, the effects of pretreatment, printing parameters and rheological properties, and cooking and storage on the dimensional quality of the printed foods are summarized, and solutions are also provided for improving the dimensional quality of the printed products at each step. Before printing, incorporating additives or applying physical, chemical, or biological pretreatments can improve the dimensional quality of carbohydrate-based, protein-based, or lipid-based printed food. During printing, controlling the printing parameters and modifying the rheological properties of inks can affect the shape of printed products. Furthermore, post-processing is essential for some printed foods. After printing, changing formulations, incorporating additives, and selecting post-processing methods and conditionsmay help achieve the desired shape of 3D-printed or 4D-printed products during cooking. Additives help in the storage stability of printed food. Finally, various opportunities have been proposed to regulate the dimensional properties of 3D-printed structures. This review provides detailed guidelines for researchers and users of 3D printers to produce various printed foods with the desired shapes and appearances. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
30. Effect of dietary β-mannanase supplementation on energy and nutrient utilization in diets fed to broiler chickens: A metaanalysis.
- Author
-
Hyun Woo Kim, Ji Hye Lee, JaeHwan Lee, and Dong Yong Kil
- Subjects
- *
RANDOM effects model , *DIETARY supplements , *BROILER chickens , *ENERGY consumption , *SOYBEAN meal - Abstract
Beta-mannan (β-mannan) is a polysaccharide composed of repeating units of mannose, galactose, and glucose. The increased amount of β-mannan is present in various plant protein sources such as soybean meal, palm kernel meal, copra meal, and guar meal. β-mannan is considered an antinutritional factor for non-ruminant animals. Endo-β-mannanase enzymes are endo-hydrolases that can cleave the internal glycosidic bonds of the mannan backbone. As a result, β-mannanase is used to break down β-mannan in animal feeds, thereby aiming to reduce its potential anti-nutritional effects. Previous research has demonstrated that dietary β-mannanase supplementation improves energy and nutrient utilization in broiler diets possibly by decreasing digesta viscosity in the gastrointestinal tract. However, results from previous studies have been inconsistent, mainly due to variable experimental conditions including animals, experimental design, and environment. Meta-analysis is a useful method to comprehensively evaluate and integrate various results from previous studies, thereby providing reliable and practical insights. Therefore, the objective of this study was to conduct the meta-analysis to evaluate the effect of dietary β-mannanase supplementation on digesta viscosity, and energy and nutrient utilization in diets for broiler chickens. Through an extensive literature search conducted on Scopus, PubMed, Web of Science, and Google Scholar between January 2003 and December 2023, we identified 10 eligible studies. The meta-analysis was performed using the “metafor” package in R software version 4.1.3. (R Core Team, 2023), and the standardized mean difference (SMD) and its 95% confidence interval (CI) were calculated using the random effect model. The results revealed that dietary β-mannanase supplementation increased apparent total tract retention (ATTR) of dry matter (SMD = 1.84; 95% CI: 0.46 to 3.21; P = 0.016), gross energy (SMD = 2.16; 95% CI: 1.19 to 3.12; P = 0.001), and nitrogen-corrected apparent metabolizable energy (AMEn ) in broiler diets (SMD = 3.38; 95% CI: 1.63 to 5.14; P = 0.002; Table 1). Moreover, dietary β-mannanase supplementation increased apparent ileal digestibility (AID) of gross energy (SMD = 6.65; 95% CI: 3.78 to 9.53; P = 0.002) and nitrogen (SMD = 1.41; 95% CI: 0.55 to 2.27; P = 0.006) in broiler diets (Figures 1 and 2). Finally, digesta viscosity (SMD = -3.35; 95% CI: -4.69 to -2.02; P < 0.001) in broiler chickens was decreased by dietary β-mannanase supplementation. In conclusion, the current meta-analysis indicates that dietary β-mannanase supplementation improves the overall utilization of energy and nutrients in diets with decreasing digesta viscosity in broiler chickens. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
31. Effect of dietary β-mannanase on growth performance, immune organ weight, and intestinal morphology of broiler chickens: A meta-analysis.
- Author
-
Hyun Woo Kim, Ji Hye Lee, Jae-Hwan Lee, and Dong Yong Kil
- Subjects
- *
RANDOM effects model , *BROILER chickens , *DIETARY supplements , *GASTROINTESTINAL system , *IMMUNE system - Abstract
Beta-mannan (β-mannan) is commonly found in various feedstuffs and is well-recognized as an anti-nutritional factor for non-ruminant animals. In broiler chickens, dietary β-mannan is known to increase digesta viscosity, which is highly associated with decreased growth performance and intestinal health. Moreover, dietary β-mannan comprises surface components of various pathogens, which are recognized by innate immune systems, leading to an overstimulation of immune system. This over-expression of immune system by dietary β-mannan is likely considered the reason for decreased performance and health in broiler chickens. One potential solution to mitigate this antinutritional effect of dietary β-mannan is the supplementation of exogenous β-mannanase in broiler diets. Previous studies have demonstrated that dietary supplementation of β-mannanase improves growth performance, immune responses, and intestinal morphology in broiler chickens by improving nutrient digestion and absorption in the gastrointestinal tract. However, existing research on the effect of dietary supplementation of β-mannanase has shown highly variable results, possibly due to large variations in experimental designs such as number of animals, animal genotype, experimental locations, and rearing conditions. Therefore, to obtain a comprehensive understanding of previously reported various results regarding the effect of dietary β-mannanase, it is necessary to integrate them into quantitative analysis through meta-analysis. Subsequently, the objective of this study was to conduct a meta-analysis summarizing the outcomes of the effect of dietary β-mannanase on growth performance, immune organ weight, and intestinal morphology of broiler chickens. A total of 27 eligible studies were identified through a comprehensive literature search conducted on Scopus, PubMed, Web of Science, and Google Scholar between January 2003 and December 2023. The meta-analysis was performed with the package “metafor” of the R software version 4.1.3. (R Core Team, 2023), and the standardized mean difference (SMD) and its 95% confidence interval (CI) were calculated using the random effect model. The results indicated that dietary supplementation of [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
32. Effect of increasing glycine equivalent in low crude protein diets on growth performance in broiler chickens raised under multiple stress conditions.
- Author
-
Ji Hye Lee, Hyun Woo Kim, Deok Yun Kim, and Dong Yong Kil
- Subjects
- *
BROILER chickens , *CYCLIC loads , *DIETARY supplements , *GLYCINE agents , *BIRDCAGES , *PROTEINS in animal nutrition - Abstract
The objective of the current experiment was to investigate the effects of increasing glycine (Gly) equivalent in low crude protein (LCP) diets on growth performance in broiler chickens raised under multiple stress (MS) conditions. Ross 308 broiler chickens (n = 450; 22 d of age) were randomly allotted to 1 of 6 treatments with 6 replicates in a 2 × 3 factorial arrangement. The first factor included two different environmental conditions (normal condition vs. MS condition) and the second factor included three dietary treatments (CON, control diets; LCP, low crude protein diets; LCP+Gly, LCP diets with Gly supplementation). Birds in normal conditions were raised under recommended environmental conditions (22 ± 0.9°C and 53.6 ± 5.99 %) with low stock density (SD; 16.9 birds/m² ). Birds in MS conditions were exposed to a cyclic heat stress condition (32 ± 0.1°C for 8 h/d and 26°C ± 0.3°C for the remaining time) with high SD (25.3 birds/m² ). The average relative humidity was 37.9 ± 4.94%. In addition, 15 birds per cage were assigned in MS conditions to increase SD, whereas 10 birds per cage were assigned in normal conditions. The treatment diets included CON diets with adequate energy, crude protein (19.50% CP and 1.15% Gly equivalents), and other nutrients recommended for growing broiler chickens and LCP diets with low CP content (16.50% CP and 1.15% Gly equivalents) but adequate other nutrients. The LCP+Gly diets had increasing concentrations of Gly equivalents (17.19% CP and 1.73% Gly equivalents) by Gly supplementation to LCP diets. The diets and water were provided ad libitum throughout the experiment. Experiment lasted for 16 d from 22 d to 37 d of age. At the conclusion of the study, growth performance including body weight gain (BWG), feed intake (FI), and feed conversion ratio (FCR) was determined. All data were analyzed by 2-way ANOVA in a completely randomized design using the PROC MIXED procedure of SAS (SAS Institute Inc., Cary, NC). Results indicated that no interactions between environmental conditions and dietary treatments were observed for all growth performance measurements (Table 1). For the main effects, as expected, MS conditions decreased (P < 0.001) growth performance of broiler chickens, regardless of dietary treatments. The LCP diets increased (P < 0.05) FI and FCR as compared with CON diets, regardless of environmental conditions. However, LCP+Gly diets decreased FI (P < 0.05) and tended to decrease FCR (P = 0.076) as compared with LCP diets. In conclusion, either MS conditions or LCP diets impair growth performance in broiler chickens with no significant interaction. However, increasing Gly equivalents by Gly supplementation to LCP diets are likely to improve feed efficiency in broiler chickens regardless of stress environments. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
33. Effect of dietary supplementation of xylanase alone or combination of xylanase and β-glucanase on growth performance and intestinal measurements in broiler chickens.
- Author
-
Ji Hye Lee, Deok Yun Kim, Hyun Woo Kim, Damee Park, Min Ah Park, and Dong Yong Kil
- Subjects
DIGESTIVE enzymes ,XYLANASES ,DIETARY supplements ,BROILER chickens ,WEIGHT gain ,SOYBEAN meal ,POULTRY growth - Abstract
Poultry feeds primarily comprise plant ingredients such as cereal grains and cereal by-products that are high in non-starch polysaccharides (NSPs). However, poultry has limited digestive enzymes to efficiently utilize NSPs, and therefore, exogenous NSP-degrading enzymes (NSPase) are typically supplemented to poultry diets. Xylanase is the most widely used as NSPase in poultry diets because xylanase degrades arabinoxylans which is in increased amounts in most feed grains like corn and wheat, thereby improving dietary nutrient utilization and subsequent productive performance. β-glucanase is another potential exogenous NSPase used to degrade β-glucans present in plant ingredients. Although the benefits of dietary xylanase are well-documented, limited information regarding effects of dietary xylanase and β-glucanase complex is available. Therefore, this study aimed to investigate the effect of dietary supplementation of xylanase alone or combination of xylanase and β-glucanase on growth performance and intestinal measurements in broiler chickens. A total of four hundred 8-d-old male and female Ross 308 broiler chicks were randomly allotted to 1 of 4 dietary treatments with 10 replicates. Each replicate had 5 male and 5 female birds. Dietary treatments included a positive control (PC) diet with adequate energy and nutrients, a negative control (NC) diet with high NSPcontaining ingredients and less AME
n by 100 kcal/kg than PC diet, and 2 NC-based diets supplemented with 0.1% xylanase (4,000,000 units/kg) or 0.1% xylanase-glucanase complex (4,000,000 units/kg xylanase and 2,000,000 units/kg β-glucanase). The experiment lasted for 28 d. For intestinal measurements including jejunal morphology and ileal digesta viscosity, 1 male chicken per replicate was selected based on the body weight at the end of the experiment. Results indicated that birds fed PC diets had less (P < 0.05) FCR than those fed NC diets (Table 1). Birds fed diets supplemented with xylanase alone or combination of xylanase and β-glucanase had also less (P < 0.05) FCR than those fed NC diets. No difference in FCR was observed between birds fed PC diets and those fed diets supplemented with xylanase alone or combination of xylanase and β-glucanase. However, dietary treatments had no effects on body weight, body weight gain, and feed intake of broiler chickens. Jejunal villous height to crypt depth ratio (VH:CD) was greater (P < 0.05) for birds fed PC diets or diets supplemented with combination of xylanase and β-glucanase than those fed NC diets (Table 2). Feeding diets supplemented with xylanase alone or combination of xylanase and β-glucanase decreased (P < 0.05) ileal digesta viscosity as compared with feeding NC diets (Table3). In conclusion, feeding high NSP and low energy diets supplemented with either 0.1% xylanase alone or 0.1% xylanase and β-glucanase complex results in similar productive performance of broiler chickens as compared with feeding typical corn-soybean meal-based diets possibly due to improved intestinal structure and decreased digesta viscosity. [ABSTRACT FROM AUTHOR]- Published
- 2024
- Full Text
- View/download PDF
34. Increasing concentrations of dietary threonine, tryptophan, and glycine improve growth performance and intestinal health with decreasing stress responses in broiler chickens raised under multiple stress conditions
- Author
-
Hyun Woo Kim, Jong Hyuk Kim, Gi Ppeum Han, and Dong Yong Kil
- Subjects
Broiler chicken ,Glycine ,Multiple stress ,Threonine ,Tryptophan ,Animal culture ,SF1-1100 - Abstract
The current study aimed to compare the effects of increasing concentrations of dietary threonine (Thr), tryptophan (Trp), and glycine (Gly) on growth performance, stress biomarkers, and intestinal function in broiler chickens under multiple stress conditions. Five hundred sixty broiler chickens at 21 d old were randomly allotted to 5 treatments with 8 replicates. Birds in a positive control (PC) treatment were raised under low stock density (16.9 birds/m2 per cage) with recommended environmental conditions, whereas birds in 4 treatments were subjected to multiple stress conditions: a cyclic heat stress of 30 ± 0.3 °C for 10 h and 23 ± 0.2 °C for 14 h per day with high stock density (25.3 birds/m2 per cage). A basal diet was assigned to both PC and negative control (NC) treatments. Three additional diets were individually formulated to contain double concentrations of digestible Thr, Trp, or Gly + Ser compared with their concentrations in the basal diet. The experiment lasted for 14 d. Results showed that NC treatment had less growth performance (P
- Published
- 2024
- Full Text
- View/download PDF
35. The efficacy of physeal bar resection with guided growth in the treatment of physeal arrest with angular limb deformity
- Author
-
Mohammed Salman Alhassan, Kun Bo Park, Hyun Woo Kim, Hoon Park, and Kyeong Hyeon Park
- Subjects
Medicine ,Science - Abstract
Abstract Premature physeal arrest can cause progressive deformities and functional disabilities of the lower limbs. This study addressed the outcomes after physeal bar resection with or without guided growth (temporary hemiepiphysiodesis) for the treatment of angular limb deformities. We retrospectively analyzed 27 patients (mean 9 years; range, 3–12 years) who underwent physeal bar resection of the distal femur (15 patients), proximal tibia (3 patients), and distal tibia (9 patients) between 2002 and 2020. Fifteen patients underwent physeal bar resection only (Group A), and the other twelve underwent simultaneous guided growth (Group B). The correction angle (angle change between the preoperative and last follow-up values) was compared and analyzed. The overall mean correction angle was 2.9° (range, − 9 to 18.3°). A total of 12 (45%) patients had a > 5° angular deformity improvement (mean, 9.6°; range, 5–18.3°), 9 (33%) had a 5° worsening of the angular deformity (mean, 6.7°; range, 5.2–9°). The correction angle in Group B (mean 7.6° ± 6.2) was significantly higher than that in Group A (mean − 0.77° ± 6.3) (P = 0.01). We found six (40%) and zero patients with a > 5° angular deformity increase in Groups A and B, respectively (P
- Published
- 2024
- Full Text
- View/download PDF
36. Pericyte derivation and transplantation for blood-CNS barrier reconstitution in CNS disorders
- Author
-
Hyun Woo Kim, Kenneth Lap Kei Wu, Kin-Wai Tam, Ying-Shing Chan, and Daisy Kwok-Yan Shum
- Subjects
Pericytes ,Cell therapy ,Blood-CNS barrier ,Adult stem cells ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Disruption of the blood-central nervous system barrier (BCB) is increasingly recognized as a pathological factor in diseases and trauma of the central nervous system. Despite the neuropathological impact, current treatment modalities do not target the BCB; strategies to reconstitute the impaired BCB have been restricted to nutritional and dietary remedies. As an integral cell type in the neurovascular unit, pericytes are crucial to the development, maintenance, and repair of the BCB. As such, pericytes are well poised as cellular agents for reconstitution of the impaired BCB. Here, we summarize recent revelations regarding the role of BCB disruption in diseases and trauma of the central nervous system and highlight how pericytes are harnessed to provide targeted therapeutic effect in each case. This review will also address how recent advances in pericyte derivation strategies can serve to overcome practical hurdles in the clinical use of pericytes.
- Published
- 2024
- Full Text
- View/download PDF
37. Electroacupuncture Treatment for Post-Stroke Foot Drop: A Systemic Review of Randomized Controlled Trials
- Author
-
Hye Jeong Jo, Go Eun Chae, Hyun Woo Kim, Young Jin Lee, Ahra Koh, Ji Eun Choi, So Jung Kim, and Woo Young Kim
- Subjects
electroacupuncture ,foot drop ,randomized controlled trial ,stroke ,Miscellaneous systems and treatments ,RZ409.7-999 ,Therapeutics. Pharmacology ,RM1-950 - Abstract
A review of randomized controlled trials (RCTs) using electroacupuncture (EA) to treat patients with foot drop was performed to analyze the effectiveness of EA for this condition. Relevant studies (n = 183) from 7 databases (Cochrane Library, Excerpta Medica Database, PubMed, China National Knowledge Infrastructure, Korean Studies Information Service System, Research Information Sharing Service, and Oriental Medicine Advanced Searching Integrated System) were selected based on the inclusion and exclusion criteria, and 12 RCTs met the selection criteria. In all 12 studies, EA showed significantly positive changes. In most indicators, positive changes were observed in the EA group compared with that in the control group. Significant increases were confirmed in muscle strength-related indicators such as the Fugl–Meyer motor scale, surface electromyography, active range of motion, and gait-related indicators such as the Tinetti score, maximum walking speed, and Berg balance scale. No notable adverse events were reported. EA is suggested as an effective treatment for post-stroke foot drop; however, more RCTs are required.
- Published
- 2024
- Full Text
- View/download PDF
38. Protective effect of gut microbiota restored by fecal microbiota transplantation in a sepsis model in juvenile mice
- Author
-
Young Joo Han, SungSu Kim, Haksup Shin, Hyun Woo Kim, and June Dong Park
- Subjects
fecal microbiota transplantation ,sepsis ,microbiota ,antibiotics ,mouse model ,pediatric ,Immunologic diseases. Allergy ,RC581-607 - Abstract
IntroductionRestoring a balanced, healthy gut microbiota through fecal microbiota transplantation (FMT) has the potential to be a treatment option for sepsis, despite the current lack of evidence. This study aimed to investigate the effect of FMT on sepsis in relation to the gut microbiota through a sepsis model in juvenile mice.MethodsThree-week-old male mice were divided into three groups: the antibiotic treatment (ABX), ABX-FMT, and control groups. The ABX and ABX-FMT groups received antibiotics for seven days. FMT was performed through oral gavage in the ABX-FMT group over the subsequent seven days. On day 14, all mice underwent cecal ligation and puncture (CLP) to induce abdominal sepsis. Blood cytokine levels and the composition of fecal microbiota were analyzed, and survival was monitored for seven days post-CLP.ResultsInitially, the fecal microbiota was predominantly composed of the phyla Bacteroidetes and Firmicutes. After antibiotic intake, an extreme predominance of the class Bacilli emerged. FMT successfully restored antibiotic-induced fecal dysbiosis. After CLP, the phylum Bacteroidetes became extremely dominant in the ABX-FMT and control groups. Alpha diversity of the microbiota decreased after antibiotic intake, was restored after FMT, and decreased again following CLP. In the ABX group, the concentrations of interleukin-1β (IL-1β), IL-2, IL-6, IL-10, granulocyte macrophage colony-stimulating factor, tumor necrosis factor-α, and C-X-C motif chemokine ligand 1 increased more rapidly and to a higher degree compared to other groups. The survival rate in the ABX group was significantly lower (20.0%) compared to other groups (85.7%).ConclusionFMT-induced microbiota restoration demonstrated a protective effect against sepsis. This study uniquely validates the effectiveness of FMT in a juvenile mouse sepsis model, offering potential implications for clinical research in critically ill children.
- Published
- 2024
- Full Text
- View/download PDF
39. Dialog-based multi-item recommendation using automatic evaluation
- Author
-
Euisok Chung, Hyun Woo Kim, Byunghyun Yoo, Ran Han, Jeongmin Yang, and Hwa Jeon Song
- Subjects
automatic evaluation ,multi-item recommendation ,multimodal fusion ,multiprompt learning ,Telecommunication ,TK5101-6720 ,Electronics ,TK7800-8360 - Abstract
In this paper, we describe a neural network-based application that recommends multiple items using dialog context input and simultaneously outputs a response sentence. Further, we describe a multi-item recommendation by specifying it as a set of clothing recommendations. For this, a multimodal fusion approach that can process both cloth-related text and images is required. We also examine achieving the requirements of downstream models using a pretrained language model. Moreover, we propose a gate-based multi-modal fusion and multiprompt learning based on a pretrained language model. Specifically, we propose an automatic evaluation technique to solve the one-to-many mapping problem of multi-item recommendations. A fashion-domain multimodal dataset based on Koreans is constructed and tested. Various experimental environment settings are verified using an automatic evaluation method. The results show that our proposed method can be used to obtain confidence scores for multi-item recommendation results, which is different from traditional accuracy evaluation.
- Published
- 2024
- Full Text
- View/download PDF
40. Mass spectrometry-based ginsenoside profiling: Recent applications, limitations, and perspectives
- Author
-
Hyun Woo Kim, Dae Hyun Kim, Byeol Ryu, You Jin Chung, Kyungha Lee, Young Chang Kim, Jung Woo Lee, Dong Hwi Kim, Woojong Jang, Woohyeon Cho, Hyeonah Shim, Sang Hyun Sung, Tae-Jin Yang, and Kyo Bin Kang
- Subjects
Chemical profiling ,Genetic variation ,Ginseng ,Ginsenoside ,Mass spectrometry ,Botany ,QK1-989 - Abstract
Ginseng, the roots of Panax species, is an important medicinal herb used as a tonic. As ginsenosides are key bioactive components of ginseng, holistic chemical profiling of them has provided many insights into understanding ginseng. Mass spectrometry has been a major methodology for profiling, which has been applied to realize numerous goals in ginseng research, such as the discrimination of different species, geographical origins, and ages, and the monitoring of processing and biotransformation. This review summarizes the various applications of ginsenoside profiling in ginseng research over the last three decades that have contributed to expanding our understanding of ginseng. However, we also note that most of the studies overlooked a crucial factor that influences the levels of ginsenosides: genetic variation. To highlight the effects of genetic variation on the chemical contents, we present our results of untargeted and targeted ginsenoside profiling of different genotypes cultivated under identical conditions, in addition to data regarding genome-level genetic diversity. Additionally, we analyze the other limitations of previous studies, such as imperfect variable control, deficient metadata, and lack of additional effort to validate causation. We conclude that the values of ginsenoside profiling studies can be enhanced by overcoming such limitations, as well as by integrating with other -omics techniques.
- Published
- 2024
- Full Text
- View/download PDF
41. Potentials of 3D printing in nutritional and textural customization of personalized food for elderly with dysphagia
- Author
-
Chhychhy Chao, Hyong Kyong Nam, Hyun Jin Park, and Hyun Woo Kim
- Subjects
3D food Printing ,Elderly nutrition ,Dysphagia ,Personalized food ,Texture modification ,Agriculture (General) ,S1-972 ,Chemistry ,QD1-999 - Abstract
Abstract Elderly individuals commonly experience the risk of dysphagia or difficulties in eating and swallowing food safely. Three-dimensional (3D) food printing is a promising technique widely used in customized food development. This paper reviewed the potential of 3D food printing in nutritional customization and textural modification of personalized food for the elderly with dysphagia. 3D food printing can be used to re-formulate the food ink by combining more than one type of food materials to ensure high calorie and nutrient intake, improve sensory quality, and prevent malnutrition; thus, understanding the functional properties of such macronutrients compounds is essential to design food ink that meets personalized nutrient requirements. Hydrocolloids have been commonly used to modify the desired soft texture and consistent viscoelastic properties of 3D-printed elderly food, as well as improve printability and structural stability. The food standard guidelines have been established and used to categorize texture-modified foods to ensure easy to eat and safe swallowing for the elderly with swallowing difficulties. Finally, the production of personalized food using 3D printing may provide more food options, facilitate safe oral intake, and increase calorie intake to improve the healthy mealtime experience for the elderly.
- Published
- 2024
- Full Text
- View/download PDF
42. Managing Clopidogrel Resistance in Neurointervention: Surveying Current Approaches
- Author
-
Hyun Woo Kim, Ivo Bach, Juan Carlos Martinez Gutierrez, Adam A. Dmytriw, Salvatore D'Amato, Hussein A. Zeineddine, Albert J. Yoo, and Sunil A. Sheth
- Subjects
antiplatelets ,neurointervention ,platelet function testing ,Neurology. Diseases of the nervous system ,RC346-429 ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
Background Because of the variability in patient responses to clopidogrel and to reduce the risk of thromboembolic complications, adjusting the antiplatelet regimen based on platelet function testing has become a widespread practice in neurointervention. We aimed to explore current patterns related to this practice. Methods We conducted a survey targeting neurointerventionalists, comprising multiple‐choice questions and opportunities for free‐text responses when necessary. The survey was distributed via a professional society distribution list (the Society of Vascular and Interventional Neurology) and 2 consortium emailing lists (WovenEndoBridge and Neurointerventional Research Consortia). The data obtained from the responses were analyzed using descriptive statistics. Results A total of 133 neurointerventionalists, representing 79 institutions within 27 countries, responded to the survey. A total of 62% of respondents tested for clopidogrel resistance before any neurovascular stent placements. A total of 80% used VerifyNow point‐of‐care P2Y12 assay; other assays included multiplate analyzer, platelet function analyzer, and CYP2C19 genotype assay. Respondents reported 25 different therapeutic thresholds, with the P2Y12 reaction unit range between 60 and 180 most commonly used (16.4%). A total of 61% reported they would switch to ticagrelor in the case of persistent resistance. On the other hand, when patients are supratherapeutic, 48% did not make any changes, whereas 42% reduced clopidogrel dose. Finally, 93% opined that a well‐established protocol for management of clopidogrel resistance was needed. Conclusions Neurointerventional practice patterns around clopidogrel resistance remain heterogeneous. Our results underscore the need for evidence‐based guidance on the management of clopidogrel resistance in neurointervention.
- Published
- 2024
- Full Text
- View/download PDF
43. The Chronic Toxicity of Endocrine-Disrupting Chemical to Daphnia magna: A Transcriptome and Network Analysis of TNT Exposure
- Author
-
Jun Lee, Hyun Woo Kim, Dong Yeop Shin, Jun Pyo Han, Yujin Jang, Ju Yeon Park, Seok-Gyu Yun, Eun-Min Cho, and Young Rok Seo
- Subjects
endocrine-disrupting chemical ,chronic exposure ,gene expression profile ,biological network analysis ,adverse outcome pathway (AOP) ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Endocrine-disrupting chemicals (EDCs) impair growth and development. While EDCs can occur naturally in aquatic ecosystems, they are continuously introduced through anthropogenic activities such as industrial effluents, pharmaceutical production, wastewater, and mining. To elucidate the chronic toxicological effects of endocrine-disrupting chemicals (EDCs) on aquatic organisms, we collected experimental data from a standardized chronic exposure test using Daphnia magna (D. magna), individuals of which were exposed to a potential EDC, trinitrotoluene (TNT). The chronic toxicity effects of this compound were explored through differential gene expression, gene ontology, network construction, and putative adverse outcome pathway (AOP) proposition. Our findings suggest that TNT has detrimental effects on the upstream signaling of Tcf/Lef, potentially adversely impacting oocyte maturation and early development. This study employs diverse bioinformatics approaches to elucidate the gene-level toxicological effects of chronic TNT exposure on aquatic ecosystems. The results provide valuable insights into the molecular mechanisms of the adverse impacts of TNT through network construction and putative AOP proposition.
- Published
- 2024
- Full Text
- View/download PDF
44. 8-Prenylgenistein Isoflavone in Cheonggukjang Acts as a Novel AMPK Activator Attenuating Hepatic Steatosis by Enhancing the SIRT1-Mediated Pathway
- Author
-
Radha Arulkumar, Hee Jin Jung, Sang Gyun Noh, Hyun Woo Kim, and Hae Young Chung
- Subjects
fermented soybean ,cheonggukjang ,8-prenylgenistein ,hepatic steatosis ,AMP-activated protein kinase ,sirtuin 1 ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
8-Prenylgenistein (8PG), a genistein derivative, is present in fermented soybeans (Glycine max), including cheonggukjang (CGJ), and exhibits osteoprotective, osteogenic, and antiadipogenic properties. However, the hepatoprotective effects of 8PG and its underlying molecular mechanisms remain largely unexplored. Here, we identified the high binding affinity of 8PG with AMP-activated protein kinase (AMPK) and sirtuin 1 (SIRT1), which acts as a potent AMPK activator that counteracts hepatic steatosis. Notably, 8PG exhibited better pharmacokinetics with greater absorption and higher plasma binding than the positive controls for the target proteins. Moreover, 8PG exerted non-carcinogenic activity in rats and significantly increased AMPK phosphorylation. Compound C, an AMPK inhibitor, did not antagonize 8PG-activated AMPK in HepG2 cells. 8PG significantly attenuated palmitate-induced lipid accumulation and enhanced phosphorylated AMPK and its downstream target, acetyl-CoA carboxylase. Further, 8PG activated nuclear SIRT1 at the protein level, which promoted fatty acid oxidation in palmitate-treated HepG2 cells. Overall, 8PG acts as a potent AMPK activator, further attenuating hepatic steatosis via the SIRT1-mediated pathway and providing new avenues for dietary interventions to treat metabolic dysfunction-associated steatotic liver disease (MASLD).
- Published
- 2024
- Full Text
- View/download PDF
45. Aged Brain Metabolomics Study by Metabolic Profiling Analysis of Amino Acids, Organic Acids, and Fatty Acids in Cortex, Cerebellum, Hypothalamus, and Hippocampus of Rats
- Author
-
Byeongchan Choi, Moongi Ji, Songjin Oh, Youngbae Kim, Subin Choi, Hyun Woo Kim, Hae Young Chung, and Man-Jeong Paik
- Subjects
aging ,amino acid ,organic acid ,fatty acid ,metabolic profiling analysis ,rat brain tissues ,gas chromatography-tandem mass spectrometry ,Biochemistry ,QD415-436 ,Biology (General) ,QH301-705.5 - Abstract
Background: Aging is a progressive process characterized by weakness in brain function. Although metabolomics studies on the brain related with aging have been conducted, it is not yet fully understood. A systematic metabolomics study was performed to search for biomarkers and monitor altered metabolism in various brain tissues of the cortex, cerebellum, hypothalamus, and hippocampus of young (8 months old) and old rats (22 months old). Methods: Simultaneous profiling analysis of amino acids (AAs), organic acids (OAs), and fatty acids (FAs) in the brain tissues of young and old rats were performed by gas chromatography-tandem mass spectrometry. Results: Under optimal conditions, AA, OA, and FA profiling methods showed good linearity (r ≥0.995) with limit of detection of ≤30 and 73.2 ng and limit of quantification of ≤90.1 and 219.5 ng, respectively. Repeatability varied from 0.4 to 10.4 and 0.8 to 14.8% relative standard deviation and accuracy varied from –11.3 to 10.3 and –12.8 to 14.1% relative error, respectively. In the profiling analysis, total 32, 43, 45, and 30 metabolites were determined in cortex, cerebellum, hypothalamus, and hippocampus, respectively. In statistical analysis, eight AAs (alanine, valine, leucine, isoleucine, threonine, serine, proline, and phenylalanine) in the cortex and four metabolites (alanine, phenylalanine, 3-hydoxypropionic acid, and eicosadienoic acid) in the cerebellum were significantly evaluated (Q-value
- Published
- 2024
- Full Text
- View/download PDF
46. Streptomyces tagetis sp. nov., a chromomycin producing bacteria isolated from the roots of Tagetes patula
- Author
-
Geeta Chhetri, Myeong Ji Kim, Inhyup Kim, Duc V. H. Tran, Young-Woo Kim, Hyun Woo Kim, and Taegun Seo
- Subjects
Streptomyces ,Tagetis patula ,chromomycin ,metabolites ,melanin ,unexplored ,Microbiology ,QR1-502 - Abstract
A novel halotolerant actinobacterium, designated as RG38T, capable of producing black extracellular melanin pigment on SP2 agar, was isolated from the roots of Tagetes patula. Comparative analysis of the 16S rRNA gene sequence revealed the highest similarity to Streptomyces collinus NBRC 12759T (99.3%). Phylogenetic analysis showed that strain RG38T clustered within the genus Streptomyces forming a monophyletic cluster with its close relatives. The average nucleotide identity (ANI), digital DNA–DNA hybridization (dDDH), and amino-acid identity (AAI) values between strain RG38T and related species within the genus Streptomyces were below the standard threshold for prokaryotic species delineation. The DNA G + C content of the strain RG38T was determined to be 73.3%. The genome size measured 7,150,598 bp comprising 17 contigs and encompassed 6,053 protein coding genes. AntiSMASH analysis of the whole genome revealed 35 putative biosynthetic gene clusters (BGCs) responsible for various secondary metabolites. Among these clusters, two gene clusters exhibited 100% similarity to the chromomycin A3, albaflavenone, and anthracimycin, respectively. These compounds were reported to possess significant anticancer and antibacterial activities. LC–MS-based analysis, coupled with further isolation studies, confirmed the production of chromomycins A2 (1), A3 (2), and their derivatives, along with their antibiotic activities. These findings underscore the potential of this novel strain as a novel resource for the discovery of diverse antimicrobial compounds. This study is the first to report an antimicrobial compound producing Streptomyces species isolated from medicinal plant T. patula. Based on a polyphasic study, the strain RG38T isolated from an unexplored habitat with a high potential for new natural products represents a novel species within the genus Streptomyces. Accordingly, we propose the name Streptomyces tagetis sp. nov. for this novel species, with the type strain is RG38T (=KCTC 49624T = TBRC 15113T).
- Published
- 2024
- Full Text
- View/download PDF
47. Risky behaviors and road safety: An exploration of age and gender influences on road accident rates.
- Author
-
Dakota McCarty and Hyun Woo Kim
- Subjects
Medicine ,Science - Abstract
Human behavior is a dominant factor in road accidents, contributing to more than 70% of such incidents. However, gathering detailed data on individual drivers' behavior is a significant challenge in the field of road safety. As a result, researchers often narrow the scope of their studies thus limiting the generalizability of their findings. Our study aims to address this issue by identifying demographic-related variables and their indirect effects on road accident frequency. The theoretical basis is set through existing literature linking demographics to risky driving behavior and through the concept of "close to home" effect, finding that the upwards of 62% of accidents happen within 11km of a driver's home. Using regression-based machine learning models, our study, looking at England, UK, explores the theoretical linkages between demographics of an area and road accident frequency, finding that census data is able to explain over 28% of the variance in road accident rates per capita. While not replacing more in-depth research on driver behavior, this research validates trends found in the literature through the use of widely available data with the use of novel methods. The results of this study support the use of demographic data from the national census that is obtainable at a large spatial and temporal scale to estimate road accident risks; additionally, it demonstrates a methodology to further explore potential indirect relationships and proxies between behaviors and road accident risk.
- Published
- 2024
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.