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Increased left atrial volume and decreased left atrial function have long been associated with atrial fibrillation. The availability of large-scale cardiac magnetic resonance imaging data paired with genetic data provides a unique opportunity to assess the genetic contributions to left atrial structure and function, and understand their relationship with risk for atrial fibrillation. Here, we use deep learning and surface reconstruction models to measure left atrial minimum volume, maximum volume, stroke volume, and emptying fraction in 40,558 UK Biobank participants. In a genome-wide association study of 35,049 participants without pre-existing cardiovascular disease, we identify 20 common genetic loci associated with left atrial structure and function. We find that polygenic contributions to increased left atrial volume are associated with atrial fibrillation and its downstream consequences, including stroke. Through Mendelian randomization, we find evidence supporting a causal role for left atrial enlargement and dysfunction on atrial fibrillation risk. In this study, a deep learning-based model of left atrial size in UK Biobank enabled genome-wide association studies in 35,049 healthy participants. Several lines of evidence, including the PITX2 locus, linked left atrial dysfunction to atrial fibrillation risk. [ABSTRACT FROM AUTHOR]

Models that utilize self-attention mechanisms, including but not limited to Vision Transformers (ViTs), have shown promising performance in visual tasks like semantic segmentation. This is attributed to their capacity to capture global features of images, enabling them to learn more comprehensive representations. However, transformer-based models typically demand a considerable amount of training data to achieve satisfactory performance, while being deficient in the ability to efficiently extract local image features. As a result, these models may not be as effective in some computer vision tasks that involve small-scale datasets, like medical image segmentation. To address these issues, this paper proposes a dual-stream encoding-based transformer dubbed as Dual-stream Transformer (DS-Former). The dual-stream module in DS-Former can simultaneously acquire local and global features in the image and construct relation between the two kinds of features via self-attention. Compared with the simple splicing or serial connection, the dual-stream module can extract more comprehensive and hierarchical feature information from the fusion interaction of the two features. Our method is evaluated on the UK Biobank (UKBB) cardiac magnetic resonance imaging (CMR) dataset and The Beyond the Cranial Vault (BTCV) abdominal challenge dataset. The experimental results indicate that our DS-Former outperforms other state-of-the-art approaches on both datasets, indicating its potential for medical images semantic segmentation. [ABSTRACT FROM AUTHOR]