260 results on '"Nichenko AS"'
Search Results
2. List of contributors
- Author
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Allibert, Michel, primary, Bakai, A.S., additional, Bochvar, A.A., additional, Bourg, Stéphane, additional, Boyes, Wayne, additional, Cammi, Antonio, additional, Delpech, Sylvie, additional, Disen, Elling, additional, Edmondson, Michael, additional, Erbay, L. Berrin, additional, Gavillet, Didier, additional, Giot, Lydie, additional, Greaves, Eduardo D., additional, Hania, P. Ralph, additional, Heuer, Daniel, additional, Jam Pedersen, Thomas, additional, Jeong, Yongjin, additional, Kinoshita, Motoyasu, additional, Kloosterman, Jan L., additional, Křepel, Jiří, additional, Lackowski, Vincent R., additional, Lathouwers, Danny, additional, Laureau, Axel, additional, Lauritzen, Bent, additional, Lee, Deokjung, additional, Lee, Youngjoon, additional, Luzzi, Lelio, additional, Martinez-Guridi, Gerardo, additional, Merle, Elsa, additional, Monti, Stefano, additional, Nichenko, Sergii, additional, Pautz, Andreas, additional, Pázsit, Imre, additional, Perkó, Zoltán, additional, Ponomarev, Leonid I., additional, Rineiski, Andrei, additional, Rodenburg, Cyril, additional, Roelofs, Ferry, additional, Rohde, Martin, additional, Sajo-Bohus, Laszlo, additional, Schönfeldt, Troels, additional, Scott, Ian, additional, Sietsma, Jilt, additional, Smith, Anna, additional, Uhlíř, Jan, additional, Waris, Abdul, additional, and Yoshioka, Ritsuo, additional
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- 2024
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3. Thyroid disorders induced by immune checkpoint inhibitors therapy of malignant tumors
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Anastasiya A. Glibka, Natalya V. Mazurina, Ksenia A. Sarantseva, Galina Y. Kharkevich, Konstantin K. Laktionov, Ekaterina A. Troshina, and Galina A. Mel`nichenko
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hypothyroidism ,thyrotoxicosis ,immune checkpoint inhibitors ,ipilimumab ,pembrolizumab ,nivolumab ,prolgolimab ,atezolizumab ,durvalumab ,avelumab ,Medicine - Abstract
In the recent years, immune checkpoint inhibitors (ICPI) have been widely used for treatment of many malignant neoplasms. In the Russian Federation, several ICPIs have been approved and actively used, namely anti-CTLA-4 monoclonal antibody (ipilimumab), anti-PD-1 monoclonal antibodies (nivolumab, pembrolizumab, prolgolimab), and anti-PD-L1 monoclonal antibodies (atezolizumab, durvalumab). ICPIs may cause various endocrine immune-mediated adverse events, most commonly thyroid dysfunction and hypophysitis, which are at large associated with anti-tumor therapy with a certain subgroup of these agents. Predictors of endocrine immune-mediated adverse events remain unclear, and their optimal prevention, prediction and treatment have not been yet defined. The review contains the information accumulated in the literature on the mechanisms, biomarkers, specific characteristics of thyroid immune-mediated adverse events and describes the principles of treatment for these thyroid disorders. This information would be useful for practicing oncologists, endocrinologists, internists, family physicians, as well as for any other medical specialties.
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- 2022
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4. Mitochondria-localized AMPK responds to local energetics and contributes to exercise and energetic stress-induced mitophagy
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Drake, Joshua C., Wilson, Rebecca J., Laker, Rhianna C., Guan, Yuntian, Spaulding, Hannah R., Nichenko, Anna S., Shen, Wenqing, Shang, Huayu, Dorn, Maya V., Huang, Kian, Zhang, Mei, Bandara, Aloka B., Brisendine, Matthew H., Kashatus, Jennifer A., Sharma, Poonam R., Young, Alexander, Gautam, Jitendra, Cao, Ruofan, Wallrabe, Horst, Chang, Paul A., Wong, Michael, Desjardins, Eric M., Hawley, Simon A., Christ, George J., Kashatus, David F., Miller, Clint L., Wolf, Matthew J., Periasamy, Ammasi, Steinberg, Gregory R., Hardie, D. Grahame, and Yan, Zhen
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- 2021
5. MSR Simulation with cGEMS: Fission Product Release and Aerosol Formation
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Sergii Nichenko, Jarmo Kalilainen, and Terttaliisa Lind
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molten-salt reactor ,severe accident ,source term ,fission product ,SAMOSAFER ,Nuclear engineering. Atomic power ,TK9001-9401 - Abstract
The release of fission products and fuel materials from a molten-salt fast-reactor fuel in hypothetical accident conditions was investigated. The molten-salt fast reactor in this investigation features a fast neutron spectrum, operating in the thorium cycle, and it uses LiF-ThF4-UF4 as a fuel salt. A coupling between the severe accident code MELCOR and thermodynamical equilibrium solver GEMS, the so-called cGEMS, with the updated HERACLES database was used in the modeling work. The work was carried out in the frame of the EU SAMOSAFER project. At the beginning of the simulation, the fuel salt is assumed to be drained from the reactor to the bottom of a confinement building. The containment atmosphere is nitrogen. The fission products and salt materials are heated by the decay heat, and due to heating, they are evaporated from the surface of a molten salt pool. The chemical system in this investigation included the following elements: Li, F, Th, U, Zr, Np, Pu, Sr, Ba, La, Ce, and Nd. In addition to the release of radioactive materials from the fuel salt, the formation of aerosols and the vapor-phase species in the modeled confinement were determined.
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- 2022
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6. Compromised Muscle Properties in a Severe Hypophosphatasia Murine Model
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Emily G. Pendleton, Anna S. Nichenko, Jennifer Mcfaline-Figueroa, Christiana J. Raymond-Pope, Albino G. Schifino, Taylor M. Pigg, Ruth P. Barrow, Sarah M. Greising, Jarrod A. Call, and Luke J. Mortensen
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hypophosphatasia ,mitochondria ,muscle ,bone ,musculoskeletal disease ,metabolic bone disorders ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Hypophosphatasia (HPP) is a rare metabolic bone disorder characterized by low levels of tissue non-specific alkaline phosphatase (TNAP) that causes under-mineralization of the bone, leading to bone deformity and fractures. In addition, patients often present with chronic muscle pain, reduced muscle strength, and an altered gait. In this work, we explored dynamic muscle function in a homozygous TNAP knockout mouse model of severe juvenile onset HPP. We found a reduction in skeletal muscle size and impairment in a range of isolated muscle contractile properties. Using histological methods, we found that the structure of HPP muscles was similar to healthy muscles in fiber size, actin and myosin structures, as well as the α-tubulin and mitochondria networks. However, HPP mice had significantly fewer embryonic and type I fibers than wild type mice, and fewer metabolically active NADH+ muscle fibers. We then used oxygen respirometry to evaluate mitochondrial function and found that complex I and complex II leak respiration were reduced in HPP mice, but that there was no disruption in efficiency of electron transport in complex I or complex II. In summary, the severe HPP mouse model recapitulates the muscle strength impairment phenotypes observed in human patients. Further exploration of the role of alkaline phosphatase in skeletal muscle could provide insight into mechanisms of muscle weakness in HPP.
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- 2023
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7. Mitochondrial plasticity supports proliferative outgrowth and invasion of ovarian cancer spheroids during adhesion
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Joseph P. Grieco, Stephanie L. E. Compton, Nazia Bano, Lucy Brookover, Anna S. Nichenko, Joshua C. Drake, and Eva M. Schmelz
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mitochondria ,mitophagy ,mitobiogenesis ,ovarian cancer metabolism ,reoxygenation ,spheroid ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
BackgroundOvarian cancer cells aggregate during or after exfoliation from the primary tumor to form threedimensional spheroids. Spheroid formation provides a survival advantage during peritoneal dissemination in nutrient and oxygen-depleted conditions which is accompanied by a suppressed metabolic phenotype and fragmented mitochondria. Upon arrival to their metastatic sites, spheroids adhere to peritoneal organs and transition to a more epithelial phenotype to support outgrowth and invasion. In this study, we investigated the plasticity of mitochondrial morphology, dynamics, and function upon adhesion.MethodsUsing our slow-developing (MOSE-L) and fast-developing (MOSE-LTICv) ovarian cancer models, we mimicked adhesion and reoxygenation conditions by plating the spheroids onto tissue culture dishes and changing culture conditions from hypoxia and low glucose to normoxia with high glucose levels after adhesion. We used Western Blot, microscopy and Seahorse analyses to determine the plasticity of mitochondrial morphology and functions upon adhesion, and the impact on proliferation and invasion capacities.ResultsIndependent of culture conditions, all spheroids adhered to and began to grow onto the culture plates. While the bulk of the spheroid was unresponsive, the mitochondrial morphology in the outgrowing cells was indistinguishable from cells growing in monolayers, indicating that mitochondrial fragmentation in spheroids was indeed reversible. This was accompanied by an increase in regulators of mitobiogenesis, PGC1a, mitochondrial mass, and respiration. Reoxygenation increased migration and invasion in both cell types but only the MOSE-L responded with increased proliferation to reoxygenation. The highly aggressive phenotype of the MOSE-LTICv was characterized by a relative independence of oxygen and the preservation of higher levels of proliferation, migration and invasion even in limiting culture conditions but a higher reliance on mitophagy. Further, the outgrowth in these aggressive cells relies mostly on proliferation while the MOSE-L cells both utilize proliferation and migration to achieve outgrowth. Suppression of proliferation with cycloheximide impeded aggregation, reduced outgrowth and invasion via repression of MMP2 expression and the flattening of the spheroids.DiscussionOur studies indicate that the fragmentation of the mitochondria is reversible upon adhesion. The identification of regulatory signaling molecules and pathways of these key phenotypic alterations that occur during primary adhesion and invasion is critical for the identification of druggable targets for therapeutic intervention to prevent aggressive metastatic disease.
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- 2023
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8. Modelling of fission products release in VERDON-1 experiment with cGEMS: Coupling of severe accident code MELCOR with GEMS thermodynamic modelling package
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Nichenko, Sergii, Kalilainen, Jarmo, Fernandez Moguel, Leticia, and Lind, Terttaliisa
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- 2021
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9. Sensing local energetics to acutely regulate mitophagy in skeletal muscle
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Anna S. Nichenko, Kalyn S. Specht, Siobhan M. Craige, and Joshua C. Drake
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mitochondria ,mitophagy ,AMPK ,energetic stress ,reactive oxygen species ,Biology (General) ,QH301-705.5 - Abstract
The energetic requirements of skeletal muscle to sustain movement, as during exercise, is met largely by mitochondria, which form an intricate, interconnected reticulum. Maintenance of a healthy mitochondrial reticulum is essential for skeletal muscle function, suggesting quality control pathways are spatially governed. Mitophagy, the process by which damaged and/or dysfunctional regions of the mitochondrial reticulum are removed and degraded, has emerged as an integral part of the molecular response to exercise. Upregulation of mitophagy in response to acute exercise is directly connected to energetic sensing mechanisms through AMPK. In this review, we discuss the connection of mitophagy to muscle energetics and how AMPK may spatially control mitophagy through multiple potential means.
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- 2022
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10. Molten Salt Reactor Research in Switzerland
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Krepel, Jiri, Hombourger, Boris, Fiorina, Carlo, Nichenko, Sergii, Kalilainen, Jarmo, Burgherr, Peter, Prasser, Horst-Michael, Pautz, Andreas, Nayak, A.K., editor, and Sehgal, Bal Raj, editor
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- 2019
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11. Neuromuscular Dysfunction Precedes Cognitive Impairment in a Mouse Model of Alzheimer’s Disease
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Brisendine, Matthew H, primary, Nichenko, Anna S, additional, Bandara, Aloka B, additional, Willoughby, Orion S, additional, Amiri, Niloufar, additional, Weingrad, Zach, additional, Specht, Kalyn S, additional, Bond, Jacob M, additional, Addington, Adele, additional, Jones, Ronald G, additional, Murach, Kevin A, additional, Poelzing, Steven, additional, Craige, Siobhan M, additional, Grange, Robert W, additional, and Drake, Joshua C, additional
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- 2023
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12. Compromised Muscle Properties in a Severe Hypophosphatasia Murine Model
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Pendleton, Emily G., primary, Nichenko, Anna S., additional, Mcfaline-Figueroa, Jennifer, additional, Raymond-Pope, Christiana J., additional, Schifino, Albino G., additional, Pigg, Taylor M., additional, Barrow, Ruth P., additional, Greising, Sarah M., additional, Call, Jarrod A., additional, and Mortensen, Luke J., additional
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- 2023
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13. Pharmaceutical Agents for Contractile-Metabolic Dysfunction After Volumetric Muscle Loss
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Jennifer McFaline-Figueroa, Albino G. Schifino, Anna S. Nichenko, Magen N. Lord, Edward T. Hunda, Elizabeth A. Winders, Emily E. Noble, Sarah M. Greising, and Jarrod A. Call
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Male ,Biomedical Engineering ,Bioengineering ,Biochemistry ,Biomaterials ,Mice, Inbred C57BL ,Mice ,Muscular Diseases ,Pharmaceutical Preparations ,Formoterol Fumarate ,Quality of Life ,Animals ,Regeneration ,Muscle, Skeletal - Abstract
Volumetric muscle loss (VML) injuries represent a majority of military service member casualties and are common in civilian populations following blunt and/or penetrating traumas. Characterized as a skeletal muscle injury with permanent functional impairments, there is currently no standard for rehabilitation, leading to lifelong disability. Toward developing rehabilitative strategies, previous research demonstrates that the remaining muscle after a VML injury lacks similar levels of plasticity or adaptability as healthy, uninjured skeletal muscle. This may be due, in part, to impaired innervation and vascularization of the remaining muscle, as well as disrupted molecular signaling cascades commonly associated with muscle adaptation. The primary objective of this study was to assess the ability of four pharmacological agents with a strong record of modulating muscle contractile and metabolic function to improve functional deficits in a murine model of VML injury. Male C57BL/6 mice underwent a 15% multimuscle VML injury of the posterior hindlimb and were randomized into drug treatment groups (formoterol [FOR], 5-aminoimidazole-4-carboxamide riboside [AICAR], pioglitazone [PIO], or sildenafil [SIL]) or untreated VML group. At the end of 60 days, the injury model was first validated by comparison to age-matched injury-naive mice. Untreated VML mice had 22% less gastrocnemius muscle mass, 36% less peak-isometric torque, and 27% less maximal mitochondrial oxygen consumption rate compared to uninjured mice (
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- 2023
14. Diagnosis and treatment of endocrinological complications of immunotherapy of oncological diseases
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Ekaterina A. Pigarova, Larisa K. Dzeranova, Nurana F. Nuralieva, and Galina A. Mel`nichenko
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immune-checkpoint inhibitors ,ipilimumab ,nivolumab ,endocrinopathies ,autoimmune diseases ,adverse effects ,thyroiditis ,pituitary ,adrenal insufficiency ,adrenalitis ,hypothyroidism ,melanoma ,lung cancer ,ctla-4 ,pd-1 ,Physiology ,QP1-981 ,Biochemistry ,QD415-436 - Abstract
In this lecture, we discuss in detail the endocrinopathies associated with the use of immune-checkpoint inhibitors in oncology. The cases, terms and features of clinical manifestations of endocrine-related immune reactions are discussed, and practical recommendations for the treatment of patients are proposed.
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- 2018
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15. Multiple hormonal resistance and metabolic disorders in pseudogypoparatiosis
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Larisa K. Dzeranova, Nadezhda V. Makazan, Ekaterina A. Pigarova, Anna N. Tiuliakova, Ekaterina V. Artemova, Tatiana V. Soldatova, Denis O. Tulupov, Alexandr V. Vorontsov, and Galina A. Mel`nichenko
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pseudohypoparathyroidism ,obesity ,farah syndrome ,parathyroidhormone ,hypothyroidism ,calcium ,hypocalcemia ,Physiology ,QP1-981 ,Biochemistry ,QD415-436 - Abstract
Pseudohypoparathyroidism is a rare group of clinically and genetically heterogeneous diseases caused by the inactivation of the PTH-signaling pathway. The main component of the disease is resistance to PTH, causing a disturbance of calcium-phosphorus metabolism. With pseudohypoparathyroidism, there may also be a development of insensitivity to thyrotropic and gonadotropic hormones of the pituitary gland and the formation of characteristic clinical features in the form of subcutaneous calcifications, brachidactyly, obesity, stuntedness, mental retardation. This article describes the clinical case of pseudohypoparathyroidism in a 35-year-old woman with classic phenotypic hypoparathyroidism with hereditary Albright osteodystrophy and a proven mutation in the GNAS gene, and discusses the spectrum of metabolic disorders of the disease.
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- 2018
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16. Early rehabilitation for volumetric muscle loss injury augments endogenous regenerative aspects of muscle strength and oxidative capacity
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Sarah M. Greising, Gordon L. Warren, W. Michael Southern, Anna S. Nichenko, Anita E. Qualls, Benjamin T. Corona, and Jarrod A. Call
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Electrical stimulation ,Neuromusculoskeletal injury ,Regenerative medicine ,Orthopaedic trauma ,Skeletal muscle injury ,Range of motion ,Diseases of the musculoskeletal system ,RC925-935 - Abstract
Abstract Background Volumetric muscle loss (VML) injuries occur due to orthopaedic trauma or the surgical removal of skeletal muscle and result in debilitating long-term functional deficits. Current treatment strategies do not promote significant restoration of function; additionally appropriate evidenced-based practice physical therapy paradigms have yet to be established. The objective of this study was to develop and evaluate early rehabilitation paradigms of passive range of motion and electrical stimulation in isolation or combination to understand the genetic and functional response in the tissue remaining after a multi-muscle VML injury. Methods Adult male mice underwent an ~ 20% multi-muscle VML injury to the posterior compartment (gastrocnemius, soleus, and plantaris muscle) unilaterally and were randomized to rehabilitation paradigm twice per week beginning 2 days post-injury or no treatment. Results The most salient findings of this work are: 1) that the remaining muscle tissue after VML injury was adaptable in terms of improved muscle strength and mitigation of stiffness; but 2) not adaptable to improvements in metabolic capacity. Furthermore, biochemical (i.e., collagen content) and gene (i.e., gene arrays) assays suggest that functional adaptations may reflect changes in the biomechanical properties of the remaining tissue due to the cellular deposition of non-contractile tissue in the void left by the VML injury and/or differentiation of gene expression with early rehabilitation. Conclusions Collectively this work provides evidence of genetic and functional plasticity in the remaining skeletal muscle with early rehabilitation approaches, which may facilitate future evidenced-based practice of early rehabilitation at the clinical level.
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- 2018
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17. Cellular and behavioral effects of lipopolysaccharide treatment are dependent upon neurokinin-1 receptor activation
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Hannah D. Fulenwider, Britessia M. Smith, Anna S. Nichenko, Jessica M. Carpenter, Sadie E. Nennig, Kejun Cheng, Kenner C. Rice, and Jesse R. Schank
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Neurokinin-1 receptor ,Nuclear factor kappa B ,Lipopolysaccharide ,Inflammation ,Cytokines ,Anhedonia ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Abstract Background Several psychiatric conditions are affected by neuroinflammation and neuroimmune activation. The transcription factor nuclear factor kappa light-chain-enhancer of activated B cells (NFkB) plays a major role in inflammation and innate immunity. The neurokinin-1 receptor (NK1R) is the primary endogenous target of the neuroactive peptide substance P, and some data suggests that NK1R stimulation may influence NFkB activity. Both NK1R and NFkB have been shown to play a functional role in complex behaviors including stress responsivity, depression, and addiction. In this study, we test whether NFkB activity in the brain (stimulated by lipopolysaccharide administration) is dependent upon the NK1R. Methods Adult male Wistar rats were treated systemically with the NK1R antagonist L822429 followed by administration of systemic lipopolysaccharide (LPS, a strong activator of NFkB). Hippocampal extracts were used to assess expression of proinflammatory cytokines and NFkB-DNA-binding potential. For behavioral studies, rats were trained to consume 1% (w/v) sucrose solution in a continuous access two-bottle choice model. After establishment of baseline, animals were treated with L822429 and LPS and sucrose preference was measured 12 h post-treatment. Results Systemic LPS treatment causes a significant increase in proinflammatory cytokine expression and NFkB-DNA-binding activity within the hippocampus. These increases are attenuated by systemic pretreatment with the NK1R antagonist L822429. Systemic LPS treatment also led to the development of anhedonic-like behavior, evidenced by decreased sucrose intake in the sucrose preference test. This behavior was significantly attenuated by systemic pretreatment with the NK1R antagonist L822429. Conclusions Systemic LPS treatment induced significant increases in NFkB activity, evidenced by increased NFkB-DNA binding and by increased proinflammatory cytokine expression in the hippocampus. LPS also induced anhedonic-like behavior. Both the molecular and behavioral effects of LPS treatment were significantly attenuated by systemic NK1R antagonism, suggesting that NK1R stimulation lies upstream of NFkB activation following systemic LPS administration and is at least in part responsible for NFkB activation.
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- 2018
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18. Neuromuscular Dysfunction Precedes Cognitive Impairment in a Mouse Model of Alzheimer's Disease.
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Brisendine, Matthew H, Nichenko, Anna S, Bandara, Aloka B, Willoughby, Orion S, Amiri, Niloufar, Weingrad, Zach, Specht, Kalyn S, Bond, Jacob M, Addington, Adele, Jones III, Ronald G, Murach, Kevin A, Poelzing, Steven, Craige, Siobhan M, Grange, Robert W, and Drake, Joshua C
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NEUROMUSCULAR transmission , *ALZHEIMER'S disease , *SKELETAL muscle , *COGNITION disorders , *LABORATORY mice , *ACTION potentials , *ANIMAL disease models - Abstract
Alzheimer's disease (AD) develops along a continuum that spans years prior to diagnosis. Decreased muscle function and mitochondrial respiration occur years earlier in those that develop AD; however, it is unknown what causes these peripheral phenotypes in a disease of the brain. Exercise promotes muscle, mitochondria, and cognitive health and is proposed to be a potential therapeutic for AD, but no study has investigated how skeletal muscle adapts to exercise training in an AD-like context. Utilizing 5xFAD mice, an AD model that develops ad-like pathology and cognitive impairments around 6 mo of age, we examined in vivo neuromuscular function and exercise adapations (mitochondrial respiration and RNA sequencing) before the manifestation of overt cognitive impairment. We found 5xFAD mice develop neuromuscular dysfunction beginning as early as 4 mo of age, characterized by impaired nerve-stimulated muscle torque production and compound nerve action potential of the sciatic nerve. Furthermore, skeletal muscle in 5xFAD mice had altered, sex-dependent, adaptive responses (mitochondrial respiration and gene expression) to exercise training in the absence of overt cognitive impairment. Changes in peripheral systems, specifically neural communication to skeletal muscle, may be harbingers for AD and have implications for lifestyle interventions, like exercise, in AD. Graphical Abstract Integrated model for the development of neuromuscular dysfunction in the AD-like pathology of 5xFAD mice. (A) At 3 mo of age, nerve-stimulated muscle function is normal across genotypes and sexes. (B) By as early as 4 mo of age, nerve-stimulated muscle function declines, and (C) corresponds to impaired sciatic nerve function in 5xFAD mice. Peripheral neuromuscular dysfunction (D) corresponds to an altered mitochondrial and transcriptional response of skeletal muscle to exercise training. (E) These peripheral phenotypes of the early AD-like pathology of 5xFAD mice were present in the absence of overt cognitive decline, particularly in male mice. Created in Biorender. [ABSTRACT FROM AUTHOR]
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- 2024
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19. Transient HIF2A inhibition promotes satellite cell proliferation and muscle regeneration
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Xie, Liwei, Yin, Amelia, Nichenko, Anna S., Beedle, Aaron M., Call, Jarrod A., and Yin, Hang
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Cell proliferation -- Research ,Blast cells -- Analysis ,Cellular signal transduction -- Research ,Transcription factors -- Research ,Muscle regeneration -- Research ,Health care industry - Abstract
The remarkable regeneration capability of skeletal muscle depends on the coordinated proliferation and differentiation of satellite cells (SCs). The self-renewal of SCs is critical for long-term maintenance of muscle regeneration potential. Hypoxia profoundly affects the proliferation, differentiation, and self-renewal of cultured myoblasts. However, the physiological relevance of hypoxia and hypoxia signaling in SCs in vivo remains largely unknown. Here, we demonstrate that SCs are in an intrinsic hypoxic state in vivo and express hypoxia-inducible factor 2A (HIF2A). HIF2A promotes the stemness and long-term homeostatic maintenance of SCs by maintaining their quiescence, increasing their self-renewal, and blocking their myogenic differentiation. HIF2A stabilization in SCs cultured under normoxia augments their engraftment potential in regenerative muscle. Conversely, HIF2A ablation leads to the depletion of SCs and their consequent regenerative failure in the long-term. In contrast, transient pharmacological inhibition of HIF2A accelerates muscle regeneration by increasing SC proliferation and differentiation. Mechanistically, HIF2A induces the quiescence and self-renewal of SCs by binding the promoter of the Spryl gene and activating Spryl expression. These findings suggest that HIF2A is a pivotal mediator of hypoxia signaling in SCs and may be therapeutically targeted to improve muscle regeneration., Introduction The coordinated proliferation and differentiation of adult stem cells provide sustainable cell sources for tissue repair and regeneration. In support of long-term tissue homeostasis, many adult stem cell populations [...]
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- 2018
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20. Mitochondrial plasticity supports proliferative outgrowth and invasion of ovarian cancer spheroids during adhesion
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Grieco, Joseph P., Compton, Stephanie L. E., Bano, Nazia, Brookover, Lucy, Nichenko, Anna S., Drake, Joshua C., Schmelz, Eva M., Grieco, Joseph P., Compton, Stephanie L. E., Bano, Nazia, Brookover, Lucy, Nichenko, Anna S., Drake, Joshua C., and Schmelz, Eva M.
- Abstract
Background: Ovarian cancer cells aggregate during or after exfoliation from the primary tumor to form threedimensional spheroids. Spheroid formation provides a survival advantage during peritoneal dissemination in nutrient and oxygen-depleted conditions which is accompanied by a suppressed metabolic phenotype and fragmented mitochondria. Upon arrival to their metastatic sites, spheroids adhere to peritoneal organs and transition to a more epithelial phenotype to support outgrowth and invasion. In this study, we investigated the plasticity of mitochondrial morphology, dynamics, and function upon adhesion. Methods: Using our slow-developing (MOSE-L) and fast-developing (MOSE-LTICv) ovarian cancer models, we mimicked adhesion and reoxygenation conditions by plating the spheroids onto tissue culture dishes and changing culture conditions from hypoxia and low glucose to normoxia with high glucose levels after adhesion. We used Western Blot, microscopy and Seahorse analyses to determine the plasticity of mitochondrial morphology and functions upon adhesion, and the impact on proliferation and invasion capacities. Results: Independent of culture conditions, all spheroids adhered to and began to grow onto the culture plates. While the bulk of the spheroid was unresponsive, the mitochondrial morphology in the outgrowing cells was indistinguishable from cells growing in monolayers, indicating that mitochondrial fragmentation in spheroids was indeed reversible. This was accompanied by an increase in regulators of mitobiogenesis, PGC1a, mitochondrial mass, and respiration. Reoxygenation increased migration and invasion in both cell types but only the MOSE-L responded with increased proliferation to reoxygenation. The highly aggressive phenotype of the MOSE-LTICv was characterized by a relative independence of oxygen and the preservation of higher levels of proliferation, migration and invasion even in limiting culture conditions but a higher reliance on mitophagy. Further, the
- Published
- 2023
21. Neuromuscular Dysfunction Precedes Cognitive Impairment in a Mouse Model of Alzheimer's Disease
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Brisendine, Matthew H., Nichenko, Anna S., Bandara, Aloka B., Willoughby, Orion S., Amiri, Niloufar, Weingrad, Zach, Specht, Kalyn S., Bond, Jacob M., Addington, Adele, Jones III, Ronald G., Murach, Kevin A., Poelzing, Steven, Craige, Siobhan M., Grange, Robert W., Drake, Joshua C., Brisendine, Matthew H., Nichenko, Anna S., Bandara, Aloka B., Willoughby, Orion S., Amiri, Niloufar, Weingrad, Zach, Specht, Kalyn S., Bond, Jacob M., Addington, Adele, Jones III, Ronald G., Murach, Kevin A., Poelzing, Steven, Craige, Siobhan M., Grange, Robert W., and Drake, Joshua C.
- Abstract
Alzheimer's disease (AD) develops along a continuum that spans years prior to diagnosis. Decreased muscle function and mitochondrial respiration occur years earlier in those that develop AD; however, it is unknown what causes these peripheral phenotypes in a disease of the brain. Exercise promotes muscle, mitochondria, and cognitive health and is proposed to be a potential therapeutic for AD, but no study has investigated how skeletal muscle adapts to exercise training in an AD-like context. Utilizing 5xFAD mice, an AD model that develops ad-like pathology and cognitive impairments around 6 mo of age, we examined in vivo neuromuscular function and exercise adapations (mitochondrial respiration and RNA sequencing) before the manifestation of overt cognitive impairment. We found 5xFAD mice develop neuromuscular dysfunction beginning as early as 4 mo of age, characterized by impaired nerve-stimulated muscle torque production and compound nerve action potential of the sciatic nerve. Furthermore, skeletal muscle in 5xFAD mice had altered, sex-dependent, adaptive responses (mitochondrial respiration and gene expression) to exercise training in the absence of overt cognitive impairment. Changes in peripheral systems, specifically neural communication to skeletal muscle, may be harbingers for AD and have implications for lifestyle interventions, like exercise, in AD.
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- 2023
22. Lifelong Ulk1-Mediated Autophagy Deficiency in Muscle Induces Mitochondrial Dysfunction and Contractile Weakness
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Anna S. Nichenko, Jacob R. Sorensen, W. Michael Southern, Anita E. Qualls, Albino G. Schifino, Jennifer McFaline-Figueroa, Jamie E. Blum, Kayvan F. Tehrani, Hang Yin, Luke J. Mortensen, Anna E. Thalacker-Mercer, Sarah M. Greising, and Jarrod A. Call
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aging ,mitophagy ,autophagy flux ,neuromuscular junction ,sarcopenia ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
The accumulation of damaged mitochondria due to insufficient autophagy has been implicated in the pathophysiology of skeletal muscle aging. Ulk1 is an autophagy-related kinase that initiates autophagosome assembly and may also play a role in autophagosome degradation (i.e., autophagy flux), but the contribution of Ulk1 to healthy muscle aging is unclear. Therefore, the purpose of this study was to investigate the role of Ulk1-mediated autophagy in skeletal muscle aging. At age 22 months (80% survival rate), muscle contractile and metabolic function were assessed using electrophysiology in muscle-specific Ulk1 knockout mice (MKO) and their littermate controls (LM). Specific peak-isometric torque of the ankle dorsiflexors (normalized by tibialis anterior muscle cross-sectional area) and specific force of the fast-twitch extensor digitorum longus muscles was reduced in MKO mice compared to LM mice (p < 0.03). Permeabilized muscle fibers from MKO mice had greater mitochondrial content, yet lower mitochondrial oxygen consumption and greater reactive oxygen species production compared to fibers from LM mice (p ≤ 0.04). Alterations in neuromuscular junction innervation patterns as well as changes to autophagosome assembly and flux were explored as possible contributors to the pathological features in Ulk1 deficiency. Of primary interest, we found that Ulk1 phosphorylation (activation) to total Ulk1 protein content was reduced in older muscles compared to young muscles from both human and mouse, which may contribute to decreased autophagy flux and an accumulation of dysfunctional mitochondria. Results from this study support the role of Ulk1-mediated autophagy in aging skeletal muscle, reflecting Ulk1′s dual role in maintaining mitochondrial integrity through autophagosome assembly and degradation.
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- 2021
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23. Lifelong Deficiency in Ulk1-Mediated Autophagy Precipitates Skeletal Muscle Aging: 566 May 29 2:30 PM - 2:45 PM
- Author
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Nichenko, Anna S., Southern, William Michael, Mercer, Grant, Greising, Sarah M., and Call, Jarrod A.
- Published
- 2019
- Full Text
- View/download PDF
24. PGC-1α overexpression partially rescues impaired oxidative and contractile pathophysiology following volumetric muscle loss injury
- Author
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Southern, William M., Nichenko, Anna S., Tehrani, Kayvan F., McGranahan, Melissa J., Krishnan, Laxminarayanan, Qualls, Anita E., Jenkins, Nathan T., Mortensen, Luke J., Yin, Hang, Yin, Amelia, Guldberg, Robert E., Greising, Sarah M., and Call, Jarrod A.
- Published
- 2019
- Full Text
- View/download PDF
25. Mitochondrial plasticity supports proliferative outgrowth and invasion of ovarian cancer spheroids during adhesion
- Author
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Grieco, Joseph P., primary, Compton, Stephanie L. E., additional, Bano, Nazia, additional, Brookover, Lucy, additional, Nichenko, Anna S., additional, Drake, Joshua C., additional, and Schmelz, Eva M., additional
- Published
- 2023
- Full Text
- View/download PDF
26. Linking atomic and mesoscopic scales for the modelling of the transport properties of uranium dioxide under irradiation
- Author
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Bertolus, Marjorie, Freyss, Michel, Dorado, Boris, Martin, Guillaume, Hoang, Kiet, Maillard, Serge, Skorek, Richard, Garcia, Philippe, Valot, Carole, Chartier, Alain, Van Brutzel, Laurent, Fossati, Paul, Grimes, Robin W., Parfitt, David C., Bishop, Clare L., Murphy, Samuel T., Rushton, Michael J.D., Staicu, Dragos, Yakub, Eugen, Nichenko, Sergii, Krack, Matthias, Devynck, Fabien, Ngayam-Happy, Raoul, Govers, Kevin, Deo, Chaitanya S., and Behera, Rakesh K.
- Published
- 2015
- Full Text
- View/download PDF
27. NOX4 Drives Exercise-Induced Mitophagy
- Author
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Mammel, Rebecca, primary, Specht, Kalyn, additional, Nichenko, Anna, additional, Addington, Adele, additional, Bond, Jacob, additional, Drake, Joshua, additional, and Craige, Siobhan, additional
- Published
- 2022
- Full Text
- View/download PDF
28. PHOSPHORYLATION OF ULK1 AT S555 IS REQUIRED FOR METABOLIC ADAPTATIONS TO CALORIC RESTRICTION
- Author
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Drake, Joshua, primary, Nichenko, Anna, additional, Wiloughby, Orion, additional, Brisendine, Matt, additional, Hays, Garrett, additional, DiGirolamo, Grace, additional, Weingrad, Zach, additional, and McMillan, Ryan, additional
- Published
- 2022
- Full Text
- View/download PDF
29. Thyroid disorders induced by immune checkpoint inhibitors therapy of malignant tumors
- Author
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Glibka, Anastasiya A., primary, Mazurina, Natalya V., additional, Sarantseva, Ksenia A., additional, Kharkevich, Galina Y., additional, Laktionov, Konstantin K., additional, Troshina, Ekaterina A., additional, and Mel`nichenko, Galina A., additional
- Published
- 2022
- Full Text
- View/download PDF
30. Pharmaceutical Agents for Contractile-Metabolic Dysfunction After Volumetric Muscle Loss
- Author
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McFaline-Figueroa, Jennifer, primary, Schifino, Albino G., additional, Nichenko, Anna S., additional, Lord, Magen N., additional, Hunda, Edward T., additional, Winders, Elizabeth A., additional, Noble, Emily E., additional, Greising, Sarah M., additional, and Call, Jarrod A., additional
- Published
- 2022
- Full Text
- View/download PDF
31. Thermal conductivity of porous UO2: Molecular Dynamics study
- Author
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Nichenko, S. and Staicu, D.
- Published
- 2014
- Full Text
- View/download PDF
32. ALGORITHMIZATION AND MOTION PROGRAMMING OF THE VACUUM CLEANER-ROBOT WITH PATH CORRECTION
- Author
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Lubov Melnikova, Kateryna Koval, and Sergii Nichenko
- Subjects
business.product_category ,Control theory ,Computer science ,Path (graph theory) ,Robot ,Vacuum cleaner ,Motion (geometry) ,business - Published
- 2021
33. List of Contributors
- Author
-
Allibert, Michel, primary, Andreades, Charalampos, additional, Bakai, A.S., additional, Boyd, Stephen, additional, Boyes, Wayne, additional, Brovchenko, Mariya, additional, Cammi, Antonio, additional, Czerski, Konrad, additional, Dai, Zhimin, additional, Degtyarev, Alexey M., additional, Delpech, Sylvie, additional, Dempsey, Lindsay, additional, Dewan, Leslie, additional, Di Marcello, Valentino, additional, Disen, Elling, additional, Dolan, Thomas J., additional, Dulera, I.V., additional, Dykin, Victor, additional, Edwards, Lyndon, additional, Erbay, L. Berrin, additional, Fedorov, Yu S., additional, Forsberg, Charles, additional, Furukawa, Kazuro, additional, Gottlieb, Stephan, additional, Grape, Sophie, additional, Greaves, Eduardo D., additional, Hellesen, Carl, additional, Herrmann, Fabian, additional, Heuer, Daniel, additional, Hirose, Yasuo, additional, Hodgson, Zara, additional, Hombourger, Boris, additional, Huke, Armin, additional, Hussein, Ahmed, additional, Jeong, Yongjin, additional, Jorgensen, Lars, additional, Kinoshita, Motoyasu, additional, Klinkby, Esben, additional, Kloosterman, Jan L., additional, Křepel, Jiří, additional, Kutsch, John, additional, Lackowski, Vince, additional, Laureau, Axel, additional, LeBlanc, David, additional, Lee, Deokjung, additional, Lizin, A.A., additional, Luzzi, Lelio, additional, Massie, Mark, additional, Merle, Elsa, additional, Myasnikov, Andrey A., additional, Nichenko, Sergii, additional, Pautz, Andreas, additional, Pázsit, Imre, additional, Lauritzen, Bent, additional, Pini, Alessandro, additional, Ponomarev, Leonid I., additional, Prasser, Michael, additional, Ragheb, Magdi, additional, Rama Rao, A., additional, Rineiski, Andrei, additional, Robertson, Sean, additional, Rodenburg, Cyril, additional, Ruprecht, Götz, additional, Sajo-Bohus, Laszlo, additional, Scarlat, Raluca, additional, Schønfeldt, Troels, additional, Scott, Ian, additional, Shimazu, Yoichiro, additional, Sinha, R.K., additional, Smith, Stephen, additional, Taylor, Christopher, additional, Tomilin, S.V., additional, Uhlíř, Jan, additional, Velikhov, Evgeny P., additional, Vijayan, P.K., additional, Waris, Abdul, additional, Weißbach, Daniel, additional, and Yoshioka, Ritsuo, additional
- Published
- 2017
- Full Text
- View/download PDF
34. Early rehabilitation for volumetric muscle loss injury augments endogenous regenerative aspects of muscle strength and oxidative capacity
- Author
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Greising, Sarah M., Warren, Gordon L., Southern, W. Michael, Nichenko, Anna S., Qualls, Anita E., Corona, Benjamin T., and Call, Jarrod A.
- Published
- 2018
- Full Text
- View/download PDF
35. Cellular and behavioral effects of lipopolysaccharide treatment are dependent upon neurokinin-1 receptor activation
- Author
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Fulenwider, Hannah D., Smith, Britessia M., Nichenko, Anna S., Carpenter, Jessica M., Nennig, Sadie E., Cheng, Kejun, Rice, Kenner C., and Schank, Jesse R.
- Published
- 2018
- Full Text
- View/download PDF
36. Skeletal muscle metabolic adaptations to endurance exercise training are attainable in mice with simvastatin treatment.
- Author
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William M Southern, Anna S Nichenko, Daniel D Shill, Corey C Spencer, Nathan T Jenkins, Kevin K McCully, and Jarrod A Call
- Subjects
Medicine ,Science - Abstract
We tested the hypothesis that a 6-week regimen of simvastatin would attenuate skeletal muscle adaptation to low-intensity exercise. Male C57BL/6J wildtype mice were subjected to 6-weeks of voluntary wheel running or normal cage activities with or without simvastatin treatment (20 mg/kg/d, n = 7-8 per group). Adaptations in in vivo fatigue resistance were determined by a treadmill running test, and by ankle plantarflexor contractile assessment. The tibialis anterior, gastrocnemius, and plantaris muscles were evaluated for exercised-induced mitochondrial adaptations (i.e., biogenesis, function, autophagy). There was no difference in weekly wheel running distance between control and simvastatin-treated mice (P = 0.51). Trained mice had greater treadmill running distance (296%, P
- Published
- 2017
- Full Text
- View/download PDF
37. Frontiers in Cell and Developmental Biology
- Author
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Nichenko, Anna S., Specht, Kalyn S., Craige, Siobhan M., and Drake, Joshua C.
- Subjects
AMPK ,mitochondria ,reactive oxygen species ,energetic stress ,mitophagy ,1.1 Normal biological development and functioning ,Musculoskeletal ,1 Underpinning research - Abstract
The energetic requirements of skeletal muscle to sustain movement, as during exercise, is met largely by mitochondria, which form an intricate, interconnected reticulum. Maintenance of a healthy mitochondrial reticulum is essential for skeletal muscle function, suggesting quality control pathways are spatially governed. Mitophagy, the process by which damaged and/or dysfunctional regions of the mitochondrial reticulum are removed and degraded, has emerged as an integral part of the molecular response to exercise. Upregulation of mitophagy in response to acute exercise is directly connected to energetic sensing mechanisms through AMPK. In this review, we discuss the connection of mitophagy to muscle energetics and how AMPK may spatially control mitophagy through multiple potential means. Published version
- Published
- 2022
38. Sensing local energetics to acutely regulate mitophagy in skeletal muscle
- Author
-
Nichenko, Anna S., primary, Specht, Kalyn S., additional, Craige, Siobhan M., additional, and Drake, Joshua C., additional
- Published
- 2022
- Full Text
- View/download PDF
39. Molecular Dynamics study of the mixed oxide fuel thermal conductivity
- Author
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Nichenko, S. and Staicu, D.
- Published
- 2013
- Full Text
- View/download PDF
40. Molecular Dynamics study of the effects of non-stoichiometry and oxygen Frenkel pairs on the thermal conductivity of uranium dioxide
- Author
-
Nichenko, Sergii and Staicu, Dragos
- Published
- 2013
- Full Text
- View/download PDF
41. A comprehensive study of the heat capacity of CsF from T = 5 K to T = 1400 K
- Author
-
Beneš, O., Konings, R.J.M., Sedmidubský, D., Beilmann, M., Valu, O.S., Capelli, E., Salanne, M., and Nichenko, S.
- Published
- 2013
- Full Text
- View/download PDF
42. PHOSPHORYLATION OF ULK1 AT S555 IS REQUIRED FOR METABOLIC ADAPTATIONS TO CALORIC RESTRICTION
- Author
-
Joshua Drake, Anna Nichenko, Orion Wiloughby, Matt Brisendine, Garrett Hays, Grace DiGirolamo, Zach Weingrad, and Ryan McMillan
- Subjects
Health (social science) ,Life-span and Life-course Studies ,Health Professions (miscellaneous) - Abstract
Unc-51 Like Autophagy Activating Kinase 1 (Ulk1) is responsible for initiating selective degradation of damaged/dysfunctional mitochondria (mitophagy) once phosphorylated at S555 in response to energetic stress. Mitophagy is integral for mitochondrial health and Ulk1 has been implicated to be important for metabolic adaptation to exercise. Caloric restriction (CR), which extends lifespan and healthspan, has profound metabolic benefits, including improved mitochondrial health. However, the contribution of Ulk1 in adaptation to CR is unknown. To decipher a functional role of Ulk1(S555) in adaptations to CR we used CRISPR-Cas9 generated, loss-of-function Ulk1(S555A) mice, in which Ulk1 cannot be phosphorylated at S555. 6-month-old, male and female homozygous Ulk1(S555A) mice and C57BL6/J (wild type, WT) mice were placed on a 40% CR diet for 8 weeks. Body mass in both male and female Ulk1(S555A) and WT mice was reduced with CR (p < 0.001), however female Ulk1(S555A) were heavier than their WT counterparts (p=0.02). Via nuclear magnetic resonance (NMR), male and female Ulk1(S555A) mice did not lose fat mass during CR. In addition, periovarian (female) and epididymal (male) fat mass was greater in Ulk1(S555A) compared to WT mice post-CR (p < 0.001). Furthermore, fasting blood glucose increased in male and female Ulk1(S555A) post-CR (p < 0.0001), suggesting altered substrate metabolism. In support of this notion, glucose oxidation in both quadriceps muscle and liver of male mice increased in WT following CR but not in Ulk1(S555A) mice (interaction effect p< 0.002). In sum, these data suggest that phosphorylation of Ulk1 at S555 is required for metabolic adaptations to CR.
- Published
- 2022
43. MSR Fuel Cycle and Thermo-Dynamics Simulations
- Author
-
Dietz, Jonathan, Krepel, Jiri, and Nichenko, Sergii
- Abstract
Molten salt reactors are being explored as an option for the future of nuclear energy and were selected as one of the advanced designs by the Generation IV International Forum. While research is being done in terms of the neutronics and design aspects of the molten salt reactor, the chemistry of the system is as crucial. Not only is chemistry an important aspect which requires more research, it is also key to couple such analysis to the neutronic and reprocessing simulation, as these aspects majorly influence each other. The paper makes use of the EQL0D and GEMS codes, where the former simulates the molten salt reactor neutronics and material evolution, whereas the latter uses the elemental composition to compute the speciation as well as aspects such as vapour pressure of the system. For GEMS, the HERACLES database is validated and extended, and equilibrium salt compositions are analysed. In EQL0D, simplified cases are created to handle the combinations of different fertile and carrier salt options. With respect to GEMS, the extension of the HERACLES database added new species as well as adjusted interaction parameters to be accurate even outside of the eutectic region. Additionally, the procedure of creating phase diagrams, both binary and ternary, was explored and used in order to validate the accuracy of the underlying data. While EQL0D mostly took on a supporting role in providing equilibrium elemental compositions for use with GEMS, the created cases provide valuable insight into the behaviour of various salts. The approach described in the paper has proven to be promising for the combination of neutronic and chemical considerations, however it is still in its infancy. Further additions to the HERACLES database will extend the capability of GEMS, while more intricate EQL0D cases will provide elemental compositions that are truer to real designs.
- Published
- 2022
- Full Text
- View/download PDF
44. Sensing local energetics to acutely regulate mitophagy in skeletal muscle
- Author
-
Nichenko, Anna S., Specht, Kalyn S., Craige, Siobhan M., Drake, Joshua C., Nichenko, Anna S., Specht, Kalyn S., Craige, Siobhan M., and Drake, Joshua C.
- Abstract
The energetic requirements of skeletal muscle to sustain movement, as during exercise, is met largely by mitochondria, which form an intricate, interconnected reticulum. Maintenance of a healthy mitochondrial reticulum is essential for skeletal muscle function, suggesting quality control pathways are spatially governed. Mitophagy, the process by which damaged and/or dysfunctional regions of the mitochondrial reticulum are removed and degraded, has emerged as an integral part of the molecular response to exercise. Upregulation of mitophagy in response to acute exercise is directly connected to energetic sensing mechanisms through AMPK. In this review, we discuss the connection of mitophagy to muscle energetics and how AMPK may spatially control mitophagy through multiple potential means.
- Published
- 2022
45. MSR Simulation with cGEMS: Fission Product Release and Aerosol Formation
- Author
-
Nichenko, Sergii, primary, Kalilainen, Jarmo, additional, and Lind, Terttaliisa, additional
- Published
- 2022
- Full Text
- View/download PDF
46. Autophagy: an essential but limited cellular process for timely skeletal muscle recovery from injury
- Author
-
Jarrod A. Call and Anna S. Nichenko
- Subjects
0301 basic medicine ,Time Factors ,Mitochondrion ,Biology ,Mice ,03 medical and health sciences ,Mitophagy ,Autophagy ,medicine ,Animals ,Muscle, Skeletal ,Molecular Biology ,Inflammation ,030102 biochemistry & molecular biology ,Cellular process ,Autophagosomes ,Skeletal muscle ,Cell Biology ,ULK1 ,Muscle injury ,Cell biology ,Muscle regeneration ,030104 developmental biology ,medicine.anatomical_structure ,Lysosomes ,Commentary and Views - Abstract
Macroautophagy/autophagy induction, i.e., the formation of autophagosomes, is robust following many forms of muscle injury. Autophagy inhibition studies strongly indicate that autophagy is necessary for successful muscle fiber recovery. Now, there are accumulating pieces of evidence indicating that autophagosome clearance, i.e., autophagy flux, does not increase to match the burden of accumulating damaged proteins and organelles after muscle fiber damage, creating a bottleneck effect. Some potential consequences of the bottleneck effect are reduced regenerative capacity marked by the inadequate activation of muscle stem cells (i.e., satellite cells) and a lesser commitment toward differentiation due to a deficiency in energetic substrates and/or molecular signaling pathways. These findings highlight an emerging area of investigation for both autophagy and muscle regeneration fields. The identification of the molecular mechanisms governing autophagy and autophagy flux may serve as targets for future therapies to enhance the recovery of its function in healthy and diseased muscle. ABBREVIATIONS: BNIP3: BCL2/adenovirus E1B interacting protein 3; CQ: chloroquine; DMD: Duchenne muscular dystrophy; MAP1LC3/LC3: microtubule-associated protein 1 light chain 3; ULK1: unc-51 like kinase 1.
- Published
- 2020
47. MSR Simulation with cGEMS: Fission Product Release and Aerosol Formation
- Author
-
Terttaliisa Lind, Jarmo Kalilainen, Sergii Nichenko
- Published
- 2022
- Full Text
- View/download PDF
48. Mitochondria-localized AMPK responds to local energetics and contributes to exercise and energetic stress-induced mitophagy
- Author
-
Ruofan Cao, David F. Kashatus, Eric M. Desjardins, Anna S. Nichenko, Jitendra Gautam, Matthew H. Brisendine, Huayu Shang, Hannah R. Spaulding, D. Grahame Hardie, Joshua C. Drake, Yuntian Guan, Horst Wallrabe, Mei Zhang, Maya V. Dorn, Aloka B. Bandara, Rebecca J. Wilson, Matthew J. Wolf, Michael Wong, Jennifer A. Kashatus, Gregory R. Steinberg, Kian Huang, Clint L. Miller, Simon A. Hawley, George J. Christ, Wenqing Shen, Poonam Sharma, Paul A. Chang, Zhen Yan, Ammasi Periasamy, Alexander S. Young, and Rhianna C. Laker
- Subjects
AMPK ,Male ,Bioenergetics ,Physiology ,RAT-LIVER ,Mitochondrion ,AMP-Activated Protein Kinases ,Mice ,Physical Conditioning, Animal ,Mitophagy ,medicine ,SUBCELLULAR-DISTRIBUTION ,Animals ,Humans ,skeletal muscle ,Protein kinase A ,PHOSPHORYLATION ,MITOTIMER ,Multidisciplinary ,exercise ,Chemistry ,RETICULUM ,ACTIVATED PROTEIN-KINASE ,Skeletal muscle ,SITE ,Biological Sciences ,GENE ,Cell biology ,Mitochondria ,medicine.anatomical_structure ,SKELETAL-MUSCLE ,AUTOPHAGY ,Energy Metabolism ,Homeostasis ,Biogenesis - Abstract
Significance Here, we present unequivocal evidence of physical association of AMPK holoenzymes with mitochondrial reticulum (mitoAMPK) across multiple mouse tissues with evidence of conservation in human skeletal muscle and heart. We demonstrate that mitoAMPK is activated heterogeneously across the mitochondrial reticulum by mitochondrial energetic stress. Finally, we present evidence that suggests activation of mitoAMPK in skeletal muscle is required for mitophagy. We propose that mitoAMPK responds to mitochondrial microenvironment cues to maintain energetic homeostasis through mitochondrial quality control., Mitochondria form a complex, interconnected reticulum that is maintained through coordination among biogenesis, dynamic fission, and fusion and mitophagy, which are initiated in response to various cues to maintain energetic homeostasis. These cellular events, which make up mitochondrial quality control, act with remarkable spatial precision, but what governs such spatial specificity is poorly understood. Herein, we demonstrate that specific isoforms of the cellular bioenergetic sensor, 5′ AMP-activated protein kinase (AMPKα1/α2/β2/γ1), are localized on the outer mitochondrial membrane, referred to as mitoAMPK, in various tissues in mice and humans. Activation of mitoAMPK varies across the reticulum in response to energetic stress, and inhibition of mitoAMPK activity attenuates exercise-induced mitophagy in skeletal muscle in vivo. Discovery of a mitochondrial pool of AMPK and its local importance for mitochondrial quality control underscores the complexity of sensing cellular energetics in vivo that has implications for targeting mitochondrial energetics for disease treatment.
- Published
- 2021
49. NOX4 Drives Exercise-Induced Mitophagy
- Author
-
Rebecca Mammel, Kalyn Specht, Anna Nichenko, Adele Addington, Jacob Bond, Joshua Drake, and Siobhan Craige
- Subjects
Physiology (medical) ,Biochemistry - Published
- 2022
50. MSR simulations with cGEMS
- Author
-
Kalilainen, Jarmo, Nichenko, Sergii, and Krepel, Jiri
- Abstract
Presentation in Cooperative Severe Accident Research Program (CSARP) video meeting. 7-11 June, 2021.
- Published
- 2021
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