43 results on '"Baudi, F"'
Search Results
2. ANALYSIS OF THE PATHOGENETIC ROLE OF BRCA1 MISSENSE MUTATIONS IN HEREDITARY BREAST CANCER BY A MULTI- DISCIPLINARY APPROACH
- Author
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Cuda, G., Quaresima, B., Faniello, M., Baudi, F., Alcaro, S., Ortuso, F., Battaglia, D., Roriroti, D., Costanzo, F., and Venuta, S.
- Published
- 2003
3. Dose-Dependent Effects of Zoledronic Acid on Human Periodontal Ligament Stem Cells: An In Vitro Pilot Study
- Author
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Di Vito, Anna, primary, Chiarella, E., additional, Baudi, F., additional, Scardamaglia, P., additional, Antonelli, A., additional, Giudice, D., additional, Barni, T., additional, Fortunato, L., additional, and Giudice, A., additional
- Published
- 2020
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4. LINKAGE DISEQUILIBRIUM OF 3 POLYMORPHIC RFLP MARKERS IN THE APOLIPOPROTEIN AI-CIII GENE-CLUSTER ON CHROMOSOME-11
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MARASCO O, MELINA F, MELE E, QUARESIMA B, ZINGONE A, FOCARELLI E, PICCIOTTI E, MARTELLI ML, FOTINO L, VIGNA MF, BAUDI F, DOMINIJANNI A, ANGOTTI E, PUJIA A, PERROTTI N, MATTIOLI PL, COSTANZO F, AVVEDIMENTO VE, COLONNA, ALFREDO, PORCELLINI, ANTONIO, Marasco, O, Melina, F, Mele, E, Quaresima, B, Zingone, A, Focarelli, E, Picciotti, E, Martelli, Ml, Fotino, L, Vigna, Mf, Baudi, F, Dominijanni, A, Angotti, E, Pujia, A, Perrotti, N, Colonna, Alfredo, Mattioli, Pl, Porcellini, Antonio, Costanzo, F, and Avvedimento, Ve
- Published
- 1993
5. A proteomics approach to identify changes in protein profiles in serum of Familial Adenomatous Polyposis patients
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Quaresima, B, Crugliano, T, Gaspari, M, Faniello, M, Cosimo, P, Valanzano, R, Genuardi, Maurizio, Cannataro, M, Veltri, P, Baudi, F, Doldo, P, Cuda, G, Venuta, S, Costanzo, Floriana, Genuardi, M (ORCID:0000-0002-7410-8351), Costanzo, F, Quaresima, B, Crugliano, T, Gaspari, M, Faniello, M, Cosimo, P, Valanzano, R, Genuardi, Maurizio, Cannataro, M, Veltri, P, Baudi, F, Doldo, P, Cuda, G, Venuta, S, Costanzo, Floriana, Genuardi, M (ORCID:0000-0002-7410-8351), and Costanzo, F
- Abstract
Familial adenomatous polyposis (FAP) is one of the most important clinical hereditary forms of inherited susceptibility to colorectal cancer and is characterized by a high degree of phenotypic heterogeneity. We used a mass spectrometry driven-proteomic strategy to identify serum molecules differently expressed in FAP patients. The data obtained were subsequently processed by bioinformatic analysis and confirmed by Western blotting. Significant differences were highlighted in the expression of serum proteins of FAP patients. In particular, two proteins (alpha-2-HS-glycoprotein and apoliprotein D) were down-regulated (about 0.5- and 0.7-fold, respectively) in carpeting versus diffuse FAP patients and healthy donors, while alpha-2-antiplasmin was up-regulated (about 1.4-fold). Moreover, mass spectrometry approach enabled us to identify serum biomarkers specific for two distinct clinical form of FAP, i.e. carpeting and diffuse FAR In particular, vitronectin was tip-regulated (more than 1.4-fold) in diffuse FAP patients versus carpeting FAP and versus healthy donors, and two additional proteins (Haptoglobin and alpha-1-acid glycoprotein 1) were up-regulated in 2 out of 3 carpeting FAP patients. Our study suggests that mass spectrometry combined to a strong bioinformatics analysis is a valuable tool for the identification ofquali/quantitative differences in the serum proteome of otherwise indistinguishable FAP phenotypes. Moreover, the definition of a proteomic profile, supported by the supervised classification, is a powerful and highly sensitive approach for the identification molecular signatures that are able to outperform the traditional disease markers and can therefore be efficiently applied for the diagnosis and clinical management of FAP patients. (C) 2008 Elsevier Ireland Ltd. All rights reserved.
- Published
- 2008
6. Impact of dexamethasone responsiveness on long-term outcome in patients with newly diagnosed myeloma
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Sinha, S., primary, Rajkumar, S. V., additional, Lacy, M., additional, Hayman, S., additional, Baudi, F., additional, Dispenzieri, A., additional, Lust, J., additional, Greipp, P., additional, Gertz, M., additional, and Kumar, S., additional
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- 2009
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7. High prevalence of a BRCA1 gene founder mutation, 5083del19, in unselected breast–ovarian cancer patients from Southern Italy: genotype–phenotype correlations
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Baudi, F, primary, Lavecchia, AM, additional, Quaresima, B, additional, Faniello, MC, additional, De Paola, L, additional, D'Amico, W, additional, Fabiani, F, additional, Cuda, G, additional, Costanzo, FS, additional, and Venuta, S, additional
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- 2005
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8. Transcriptional regulation of the mismatch repair gene hMLH1
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Quaresima, B., Faniello, M. C., Baudi, F., Cuda, G., Grandinetti, C., Tassone, P., Costanzo, F., and Venuta, S.
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- 2001
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9. HIV-1 Tat induces the expression of the interleukin-6 (IL6) gene by binding to the IL6 leader RNA and by interacting with CAAT enhancer-binding protein beta (NF-IL6) transcription factors.
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Ambrosino, C, Ruocco, M R, Chen, X, Mallardo, M, Baudi, F, Trematerra, S, Quinto, I, Venuta, S, and Scala, G
- Abstract
Human immunodeficiency virus type 1 (HIV-1) infection is associated with severe psoriasis, B cell lymphoma, and Kaposi's sarcoma. A deregulated production of interleukin-6 (IL6) has been implicated in the pathogenesis of these diseases. The molecular mechanisms underlying the abnormal IL6 secretion of HIV-1-infected cells may include transactivation of the IL6 gene by HIV-1. Here we report the molecular mechanisms of Tat activity on the expression of the IL6 gene. By using 5' deletion mutants of pIL6Pr-CAT and using IL6:HIV-1-LTR hybrid constructs where discrete regions of the IL6 promoter replaced the TAR sequence in HIV-1 LTR, we identified a short sequence of the 5'-untranslated region of the IL6 mRNA that is required for Tat to trans-activate the IL6 promoter. This sequence acquires a stem-loop structure and includes a UCU sequence that binds to Tat and is necessary for full trans-activation. In addition, we provide the evidence that Tat can function by enhancing the CAAT enhancer-binding protein (C/EBP) DNA binding activity and is able to complex with in vitro translated C/EBPbeta, which is a major mediator of IL6 promoter function. By using the yeast two-hybrid system and immunoprecipitation, we observed that the interaction of Tat with C/EBP proteins also occurred in vivo. The data are consistent with the possibility that Tat may function on heterologous genes by interacting with RNA structures possibly present in a large number of cellular and viral genes. In addition, Tat may function by protein-protein interactions, leading to the generation of heterodimers with specific transcription factors.
- Published
- 1997
10. Dose-Dependent Effects of Zoledronic Acid on Human Periodontal Ligament Stem Cells: An In VitroPilot Study
- Author
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Di Vito, Anna, Chiarella, E., Baudi, F., Scardamaglia, P., Antonelli, A., Giudice, D., Barni, T., Fortunato, L., and Giudice, A.
- Abstract
Bisphosphonates (BPs) are widely used to treat several metabolic and oncological diseases affecting the skeletal system. Despite BPs’ well-known therapeutic potential, they also displayed important side effects, among which is BPs-related osteonecrosis of the jaw, by targeting osteoclast activities, osteoblast, and osteocyte behavior. The aim of this study is to evaluate the biological effects of zoledronic acid (ZOL) in an in vitromodel of periodontal ligament stem cells (PDLSCs) by using an experimental setting that resembles the in vivoconditions. PDLSCs were treated with different concentrations of ZOL ranging from 0.1 to 5 μM. The effects of ZOL exposure were evaluated on cell viability via 3-[4,5-Dimethylthiaoly]-2,5-diphenyltetrazolium bromide (MTT), cell cycle analysis, apoptosis detection, and immunofluorescence. Quantitative real-time polymerase chain reaction (PCR), colorimetric detection of alkaline phosphatase activity, and Alizarin Red S staining were performed to investigate the osteogenic potential of PDLSCs exposed to ZOL. MTT analysis showed that the viability of PDLSCs exposed to ZOL concentration ≥1.5 μM for 3 and 6 days was significantly lower (P< 0.001) than that of untreated cells. The percentage of apoptotic cells was significantly higher in PDLSCs exposed for 4 days to ZOL at 2 μM (P< 0.01) and 5 μM (P< 0.001) when compared to the control. Moreover, ZOL treatment (3 days) accounted for alterations in cell cycle distribution, with an increase in the proportion of cells in G0/G1 phase and a reduction in the proportion of cells in S phase. Chronic exposure (longer than 7 days) of PDLSCs to ZOL accounted for the downregulation of ALP, RUNX2, and COL1genes at all tested concentrations, which fit well with the reduced alkaline phosphatase activity reported after 7 and 14 days of treatment. Reduced Col1 deposition in the extracellular matrix was reported after 14 days of treatment. Increased calcium deposits were observed in treated cells when compared to the control cultures. In conclusion, chronic exposure to 1 μM ZOL induced significant reduction of osteogenic differentiation, while ZOL concentrations ≥1.5 μM are required to impair PDLSCs viability and induce apoptosis.
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- 2020
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11. Identification and Characterization of BRCA1 and BRCA2 Founder Mutations
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Francesco Baudi, Enrico Ricevuto, Stefano Iacobelli, Tina Sidoni, Giuseppe Giannini, C. Ficorella, Antonio Russo, Katia Cannita, V. Cocciolone, Sidoni, T, Cocciolone, V, Giannini, G, Russo, A, Baudi, F, Cannita, K, Ficorella, C, Iacobelli, S, and Ricevuto, E
- Subjects
Settore MED/06 - Oncologia Medica ,business.industry ,Obstetrics and Gynecology ,Medicine ,Identification (biology) ,Computational biology ,BRCA1 ,BRCA2 ,Founder mutation ,business - Abstract
A large number of cancer predisposing BRCA1/BRCA2 mutations have been reported, with a wide variety among populations. In some restricted groups, specific germline mutations in these tumor suppressor genes have been found with high predominance, due to a founder effect. We focused our review on the Italian founder mutations. The first Italian BRCA1 founder mutation, 5083del19, was found in Calabria: the presence of common allele in all carriers of this mutation (also in families with Calabrian origin living in other parts of Italy) confirmed its founder effect. The same BRCA1 mutation was identified in the Sicilian population, but only the haplotype analysis can reveal the common ancestor of these groups. Another BRCA1 founder mutation, 4843delC, was found in Sicily. Four distinct BRCA1 mutations are attributable to families original from Tuscany: 3348delAG, 3285delA, 1499insA and 5183delTGT; the latter has been shown to be a founder mutation from North-Eastern Italy. The first BRCA2 mutation was identified in Sardinia, 8765delAG, a mutation already described as a founder mutation in Jewish-Yemenite families and also in French-Canadian population but with independent origins of carriers in these three populations. BRCA2 3951del3 and BRCA1 917delTT have been described as founder mutations in Middle Sardinia and in South and Middle Sardinia, respectively. Studies regarding prevalence and penetrance of founder mutations can allow to quantify the degree of homogeneity within a population and can surely help the geneticist and oncologist to simplify their choices in the genetic testing on high-risk families, on the basis of their ethnical origin.
- Published
- 2012
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12. An alternative model of H ferritin promoter transactivation by c-Jun
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Faniello, Maria C, Chirico, Giuseppa, Quaresima, Barbara, Cuda, Giovanni, Allevato, Giovanna, Bevilacqua, Maria A, Baudi, Francesco, Colantuoni, Vittorio, Cimino, Filiberto, Venuta, Salvatore, Avvedimento, Vittorio E, Costanzo, Francesco, Faniello, Mc, Chirico, G, Quaresima, B, Cuda, G, Allevato, G, Bevilacqua, MARIA ASSUNTA, Baudi, F, Colantuoni, V, Cimino, F, Venuta, S, Avvedimento, Ve, and Costanzo, F.
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Chloramphenicol O-Acetyltransferase ,Transcriptional Activation ,Binding Sites ,Transcription, Genetic ,Proto-Oncogene Proteins c-jun ,Recombinant Fusion Proteins ,Blotting, Western ,Nuclear Proteins ,Cell Biology ,Transfection ,Precipitin Tests ,Biochemistry ,Recombinant Proteins ,Cell Line ,Protein Structure, Tertiary ,Ferritins ,Cyclic AMP ,Trans-Activators ,Humans ,Promoter Regions, Genetic ,Molecular Biology ,Research Article ,HeLa Cells ,Protein Binding - Abstract
c-Jun is a member of the activator protein 1 family, and its interaction with different nuclear factors generates a wide spectrum of complexes that regulate transcription of different promoters. H ferritin promoter transcription is tightly dependent on nuclear factor Y (NFY). Ferritin transcription is activated by c-Jun, although the promoter does not contain a canonical binding site. NFY, on the other hand, does not bind c-Jun in vitro, whereas in vivo c-Jun is found in the complex containing NFY. Moreover, a c-Jun—GCN4 chimaeric construct containing only the transactivation domain of Jun and the basic-region leucine-zipper domain of GCN4 stimulates the H ferritin promoter. A synthetic GAL4 promoter and the cognate activator, the fusion protein NFY—GAL4, are potently activated by c-Jun. Titration of p300 by co-expressing E1A abolishes the stimulatory effect. Moreover, another p300-dependent promoter, the cAMP-response element, can be superactivated by c-Jun using the same mechanism. These data indicate that c-Jun, when activated or overexpressed, is recruited to the H ferritin promoter by p300, which links NFY, bound to DNA, to the complex. These results add a new level of complexity to transcriptional regulation by c-Jun, which can activate p300-dependent promoters without binding directly to the target DNA.
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- 2002
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13. p53-Mediated downregulation of H ferritin promoter transcriptional efficiency via NF-Y
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Francesco Costanzo, Barbara Quaresima, Giovanni Spinelli, Francesco Baudi, Salvatore Venuta, Giovanni Morrone, Maddalena Di Sanzo, Maria Concetta Faniello, Giannino Del Sal, Giovanni Cuda, Valentina Di Caro, Faniello, Mc, DI SANZO, M, Quaresima, B, Baudi, F, DI CARO, V, Cuda, G, Morrone, G, DEL SAL, Giannino, Spinelli, G, Venuta, S, Costanzo, F., Faniello, C, Di Sanzo, M, Di Caro, V, Del Sal, G, and Costanzo, F
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Chromatin Immunoprecipitation ,Multiprotein complex ,Transcription, Genetic ,Down-Regulation ,Biology ,Biochemistry ,Transcriptional regulation ,Downregulation and upregulation ,Transcription (biology) ,Ferritin gene ,Humans ,Electrophoretic mobility shift assay ,p300-CBP Transcription Factors ,Promoter Regions, Genetic ,Transcription factor ,Gene ,Transcriptional factor ,Cell Biology ,HCT116 Cells ,Molecular biology ,Gene Expression Regulation, Neoplastic ,CCAAT-Binding Factor ,Doxorubicin ,Apoferritins ,Tumor Suppressor Protein p53 ,Chromatin immunoprecipitation ,HeLa Cells ,Protein Binding - Abstract
The tumor suppressor protein p53 triggers many of the cellular responses to DNA damage by regulating the transcription of a series of downstream target genes. p53 acts on the promoter of the target genes by interacting with the trimeric transcription factor NF-Y. H ferritin promoter activity is tightly dependent on a multiprotein complex called Bbf; on this complex NF-Y plays a major role. The aim of this work was to study the modulation of H ferritin expression levels by p53. CAT reporter assays indicate that: (i) p53 overexpression strongly downregulates the transcriptional efficiency driven by an H ferritin promoter construct containing only the NF-Y recognition sequence and that the phenomenon is reverted by p53 siRNA; (ii) the p53 C-terminal region is sufficient to elicitate this regulation and that a correct C-terminal acetylation is also required. The H ferritin promoter displays no p53-binding sites; chromatin immunoprecipitation assays indicate that p53 is recruited on this promoter by NF-Y. The p53–NF-Y interaction does not alter the NF-Y DNA-binding ability as indicated by electrophoretic mobility shift assay (EMSA) analysis. These results demonstrate that the gene coding for the H ferritin protein belongs to the family of p53-regulated genes, therefore adding a new level of complexity to the regulation of the H ferritin transcription and delineate a role for this protein in a series of cellular events triggered by p53 activation.
- Published
- 2008
14. The tyrosine phosphatase PTPRJ/DEP-1 genotype affects thyroid carcinogenesis
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Francesco Baudi, Lorenzo Chiariotti, Rodolfo Iuliano, Franco Arturi, Marialuisa Martelli, Ilaria Le Pera, Francesco Trapasso, Carmela Cristofaro, Alfredo Fusco, Pierlorenzo Pallante, Iuliano, R., Le Pera, I., Cristofaro, C., Baudi, F., Arturi, F., Pallante, Pierlorenzo, Martelli, M. L., Trapasso, F., Chiariotti, Lorenzo, and Fusco, Alfredo
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Adenoma ,Genetic Markers ,Cancer Research ,tyrosine phosphatase ,endocrine system diseases ,Thyroid Gland ,Biology ,carcinoma ,medicine.disease_cause ,polymorphism ,thyroid ,Loss of heterozygosity ,Thyroid carcinoma ,Gene Frequency ,Genotype ,Genetics ,medicine ,Humans ,Thyroid Neoplasms ,Allele ,Molecular Biology ,Polymorphism, Genetic ,Receptor-Like Protein Tyrosine Phosphatases, Class 3 ,Thyroid ,Heterozygote advantage ,Cell Transformation, Neoplastic ,medicine.anatomical_structure ,Tumor progression ,Cancer research ,loss of heterozygosity ,Protein Tyrosine Phosphatases ,polymorphisms ,Carcinogenesis - Abstract
We recently isolated the r-PTPeta gene, which encodes a receptor-type tyrosine phosphatase protein that suppresses the neoplastic phenotype of retrovirally transformed rat thyroid cells. The human homologue gene PTPRJ/DEP-1 is deleted in various tumors. Moreover, the Gln276Pro polymorphism, located in the extracellular region of the gene, seems to play a critical role in susceptibility to some human neoplasias. Here we report the loss of heterozygosity ( LOH) of PTPRJ in 11/76 (14.5%) informative thyroid tumors ( including adenomas and carcinomas). We also looked for the Gln276Pro, Arg326Gln and Asp872Glu polymorphisms in exons 5, 6 and 13 of PTPRJ in 88 patients with thyroid tumors and in 54 healthy individuals. We found that the PTPRJ genotypes homozygous for the Gln276Pro and Arg326Gln polymorphisms, and the Asp872 allele were more frequent in thyroid carcinoma patients than in healthy individuals ( P = 0.032). In addition, PTPRJ LOH was more frequent in thyroid carcinomas of heterozygotes for Gln276Pro and Arg326Gln compared with homozygotes ( P = 0.006). This suggests that the presence of hemizygosity for these polymorphisms in the tumor facilitates tumor progression. These results indicate that the genotypic pro. le of PTPRJ affects susceptibility to thyroid carcinomas, and that allelic loss of this gene is involved in thyroid carcinogenesis.
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- 2004
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15. Germline Variant Spectrum in Southern Italian High-Risk Hereditary Breast Cancer Patients: Insights from Multi-Gene Panel Testing.
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Rocca V, Lo Feudo E, Dinatolo F, Lavano SM, Bilotta A, Amato R, D'Antona L, Trapasso F, Baudi F, Colao E, Perrotti N, Paduano F, and Iuliano R
- Abstract
Hereditary breast cancer accounts for 5-10% of all cases, with pathogenic variants in BRCA1/2 and other susceptibility genes playing a crucial role. This study elucidates the prevalence and spectrum of germline variants in 13 cancer predisposition genes among high-risk hereditary breast cancer patients from Southern Italy. We employed next-generation sequencing (NGS) to analyze 254 individuals selected through genetic counseling. Pathogenic or likely pathogenic variants were identified in 13% (34/254) of patients, with 54% of these variants occurring in non- BRCA1/2 genes. Notably, we observed a recurrent BRCA1 c.4964_4982del founder mutation, underscoring the importance of population-specific genetic screening. The spectrum of variants extended beyond BRCA1/2 to include PALB2 , ATM , TP53 , CHEK2 , and RAD51C , highlighting the genetic heterogeneity of breast cancer susceptibility. Variants of uncertain significance were detected in 20% of patients, emphasizing the ongoing challenge of variant interpretation in the era of multi-gene panel testing. These findings not only enhance our understanding of the genetic landscape of breast cancer in Southern Italy but also provide a foundation for developing more targeted, population-specific approaches to genetic testing and counseling, ultimately contributing to the advancement of precision medicine in oncology.
- Published
- 2024
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16. Novel insights into the pharmacological modulation of human periodontal ligament stem cells by the amino-bisphosphonate Alendronate.
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Di Vito A, Chiarella E, Sovereto J, Bria J, Perrotta ID, Salatino A, Baudi F, Sacco A, Antonelli A, Biamonte F, Barni T, and Giudice A
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- Humans, Diphosphonates metabolism, Diphosphonates pharmacology, Endothelial Cells, Cell Differentiation, Stem Cells metabolism, Cells, Cultured, Cell Proliferation, Periodontal Ligament metabolism, Alendronate pharmacology, Alendronate metabolism
- Abstract
Alendronate (ALN) is a second-generation bisphosphonate widely used for osteoporosis and cancer-induced bone lesions. Many studies have confirmed a strong relationship between osteonecrosis of the jaws (ONJ) development and oral bisphosphonates, especially ALN, although the molecular mechanisms underlying this pathology have not yet been elucidated. The reduction in bone turnover and vascularization usually observed in ONJ are the result of ALN action on different cell types harboured in oral microenvironment, such as osteoclasts, endothelial cells, and periodontal ligament stem cells (PDLSCs). In this perspective, the present study aims to investigate the effects of different ALN concentrations (2 μM, 5 μM, 10 μM, 25 μM, 50 μM) on the phenotype and functional properties of human PDLSCs (hPDLSCs). hPDLSCs showed a decrease in cell viability (MTT assay) only when treated with ALN concentration of 10 μM or larger for 48 h and 72 h. Cell cycle analysis revealed a moderate increase in proportion of S-phase cells after exposure to low ALN concentration (2-5 μM), an effect that was reverted after exposure to 10-50 μM ALN. Conversely, cell death was evidenced via Annexin V/PI assay at very high concentration of ALN (50 μM) after 4 days of treatment. In addition, we explored whether the effects of ALN on hPDLSCs growth and survival can be mediated by its ability to modulate oxidative stress. To this, we quantified the intracellular ROS amount and lipid peroxidation by using DCF probe and Bodipy staining, respectively. Flow cytometry analysis showed that ALN induced a dose-dependent reduction of intracellular oxidative stress and lipid peroxidation upon treatment with low concentrations at both 48 h and 72 h. Increased levels of oxidative stress was reported at 50 μM ALN and was also confirmed via TEM analysis. Despite the stability of the cellular immunophenotype, hPDLSCs showed impaired mobility after ALN exposure. Chronic exposure (7-14 days) to ALN in the range of 2-10 μM significantly decreased the expression of the differentiation-related factors ALP, RUNX2, COLI, and OPN as well as the osteogenic ability of hPDLSCs compared with untreated cells. Conversely, higher doses were found to be neutral. Our findings indicated that the effects of ALN on hPDLSCs behavior are dose-dependent and suggest a role for oxidative stress in ALN-induced cell death that may lead to novel therapeutic approaches for ONJ., Competing Interests: Declaration of Competing Interest None., (Copyright © 2023 The Authors. Published by Elsevier GmbH.. All rights reserved.)
- Published
- 2023
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17. Germline Testing in a Cohort of Patients at High Risk of Hereditary Cancer Predisposition Syndromes: First Two-Year Results from South Italy.
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Paduano F, Colao E, Fabiani F, Rocca V, Dinatolo F, Dattola A, D'Antona L, Amato R, Trapasso F, Baudi F, Perrotti N, and Iuliano R
- Subjects
- Genes, BRCA1, Genetic Predisposition to Disease, Germ Cells, Humans, Neoplastic Syndromes, Hereditary genetics, Triple Negative Breast Neoplasms genetics
- Abstract
Germline pathogenic variants (PVs) in oncogenes and tumour suppressor genes are responsible for 5 to 10% of all diagnosed cancers, which are commonly known as hereditary cancer predisposition syndromes (HCPS). A total of 104 individuals at high risk of HCPS were selected by genetic counselling for genetic testing in the past 2 years. Most of them were subjects having a personal and family history of breast cancer (BC) selected according to current established criteria. Genes analysis involved in HCPS was assessed by next-generation sequencing (NGS) using a custom cancer panel with high- and moderate-risk susceptibility genes. Germline PVs were identified in 17 of 104 individuals (16.3%) analysed, while variants of uncertain significance (VUS) were identified in 21/104 (20.2%) cases. Concerning the germline PVs distribution among the 13 BC individuals with positive findings, 8/13 (61.5%) were in the BRCA1/2 genes, whereas 5/13 (38.4%) were in other high- or moderate-risk genes including PALB2 , TP53 , ATM and CHEK2 . NGS genetic testing showed that 6/13 (46.1%) of the PVs observed in BC patients were detected in triple-negative BC. Interestingly, the likelihood of carrying the PVs in the moderate-to-high-risk genes calculated by the cancer risk model BOADICEA was significantly higher in pathogenic variant carriers than in negative subjects. Collectively, this study shows that multigene panel testing can offer an effective diagnostic approach for patients at high risk of hereditary cancers.
- Published
- 2022
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18. The Effect of Duration of Lenalidomide Maintenance and Outcomes of Different Salvage Regimens in Patients with Multiple Myeloma (MM).
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Ho M, Zanwar S, Kapoor P, Gertz M, Lacy M, Dispenzieri A, Hayman S, Dingli D, Baudi F, Muchtar E, Leung N, Kourelis T, Warsame R, Fonder A, Hwa L, Hobbs M, Kyle R, Rajkumar SV, and Kumar S
- Subjects
- Adult, Aged, Female, Hematopoietic Stem Cell Transplantation, Humans, Male, Middle Aged, Progression-Free Survival, Retrospective Studies, Salvage Therapy, Transplantation, Autologous, Treatment Outcome, Antineoplastic Combined Chemotherapy Protocols therapeutic use, Lenalidomide therapeutic use, Maintenance Chemotherapy, Multiple Myeloma drug therapy
- Abstract
The optimal duration of lenalidomide maintenance post-autologous stem cell transplant (ASCT) in Multiple Myeloma (MM), and choice of therapy at relapse post-maintenance, need further evaluation. This retrospective study assessed outcomes of patients with MM (n = 213) seen at Mayo Clinic, Rochester between 1/1/2005-12/31/2016 who received lenalidomide maintenance post-ASCT. The median PFS was 4 (95% CI: 3.4, 4.5) years from diagnosis of MM; median OS was not reached (5-year OS: 77%). Excluding patients who stopped lenalidomide maintenance within 3 years due to progression on maintenance, ≥3 years of maintenance had a superior 5-year OS of 100% vs. 85% in <3 years (p = 0.011). Median PFS was 7.2 (95% CI: 6, 8.5) years in ≥3 years vs. 4.4 (95% CI: 4.3, 4.5) years in <3 years (p < 0.0001). Lenalidomide refractoriness at first relapse was associated with inferior PFS2 [8.1 (95% CI: 6.4, 9.9) months vs. 19.9 (95% CI: 9.7, 30.2; p = 0.002) months in nonrefractory patients]. At first relapse post-maintenance, median PFS2 was superior with daratumumab-based regimens [18.4 (95% CI: 10.9, 25.9) months] versus regimens without daratumumab [8.9 (95% CI: 5.5, 12.3) months; p = 0.006]. Daratumumab + immunomodulatory drugs had superior median PFS2 compared to daratumumab + bortezomib [NR vs 1 yr (95% CI: 0.5, 1.5); p = 0.004]., (© 2021. The Author(s).)
- Published
- 2021
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19. Case Report: Identification of a Novel Pathogenic Germline TP53 Variant in a Family With Li-Fraumeni Syndrome.
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Paduano F, Fabiani F, Colao E, Trapasso F, Perrotti N, Barbieri V, Baudi F, and Iuliano R
- Abstract
Li-Fraumeni syndrome (LFS) is an inherited autosomal dominant disease characterized by a predisposition to many cancers. Germline pathogenic variants in TP53 are primarily responsible for LFS. By performing a targeted sequencing panel in a proband with liver carcinoma having a deceased son affected by osteosarcoma, we found the novel heterozygous frameshift variant c.645del (p.Ser215Argfs
* 32) in the TP53 gene. This variant co-segregated with typical LFS cancers in the family pedigree, consistent with the pathogenicity of this novel and previously undescribed TP53 variant., Competing Interests: FP is employed by Tecnologica Research Institute and Marrelli Health. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Paduano, Fabiani, Colao, Trapasso, Perrotti, Barbieri, Baudi and Iuliano.)- Published
- 2021
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20. The Case of Medication-Related Osteonecrosis of the Jaw Addressed from a Pathogenic Point of View. Innovative Therapeutic Strategies: Focus on the Most Recent Discoveries on Oral Mesenchymal Stem Cell-Derived Exosomes.
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Giudice A, Antonelli A, Chiarella E, Baudi F, Barni T, and Di Vito A
- Abstract
Bisphosphonates-related osteonecrosis of the jaw (BRONJ) was firstly reported by Marx in 2003. Since 2014, the term medication-related osteonecrosis of the jaw (MRONJ) is recommended by the American Association of Oral and Maxillofacial Surgeons (AAOMS). Development of MRONJ has been associated to the assumption of bisphosphonates but many MRONJ-promoting factors have been identified. A strong involvement of immunity components has been suggested. Therapeutic intervention includes surgical and non-surgical treatments, as well as regenerative medicine procedures for the replacement of the lost tissues. The literature confirms that the combination of mesenchymal stem cells (MSCs), biomaterials and local biomolecules can support the regeneration/repair of different structures. In this review, we report the major open topics in the pathogenesis of MRONJ. Then, we introduce the oral tissues recognized as sources of MSCs, summing up in functional terms what is known about the exosomes release in physiological and pathological conditions.
- Published
- 2020
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21. Corrigendum to 'specific changes in the proteomic pattern produced by the BRCA1-Ser1841Asn missense mutation' [International Journal of Biochemistry and Cell Biology (2007) 220-226].
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Crugliano T, Quaresima B, Gaspari M, Faniello MC, Romeo F, Baudi F, Cuda G, Costanzo F, and Venuta S
- Published
- 2017
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22. Diagnosis and follow-up of Bartonella henselae infection in the spleen of an immunocompetent patient by real-time quantitative PCR.
- Author
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Liberto MC, Matera G, Lamberti AG, Quirino A, Barreca GS, Marascio N, Baudi F, Caroleo B, Staltari O, and Focà A
- Subjects
- Adult, Anti-Bacterial Agents therapeutic use, DNA, Bacterial, Female, Humans, Immunocompetence, Bartonella Infections microbiology, Bartonella henselae isolation & purification, Real-Time Polymerase Chain Reaction methods, Splenic Diseases microbiology
- Abstract
Systemic Bartonella henselae infections are unusual in immunocompetent adults. However, here we report one such case of bartonellosis in a 34-year-old patient, who presented with fever and multinodular splenomegaly. We also describe a novel method of identifying Bartonella henselae by real-time quantitative polymerase chain reaction and sequencing of amplified products. This could prevent splenic bartonellosis being mistaken for lymphoma and thereby avert unnecessary splenectomy.
- Published
- 2013
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23. Hereditary tumours.
- Author
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Baudi F
- Subjects
- Breast Neoplasms genetics, Female, Genes, Neoplasm genetics, Humans, Risk Factors, Genetic Predisposition to Disease, Inheritance Patterns genetics, Neoplasms genetics
- Published
- 2013
- Full Text
- View/download PDF
24. The role of microRNAs in cancer susceptibility.
- Author
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Iuliano R, Vismara MF, Dattilo V, Trapasso F, Baudi F, and Perrotti N
- Subjects
- 3' Untranslated Regions genetics, Binding Sites genetics, Genome, Human, Humans, Mutation, Genetic Predisposition to Disease, MicroRNAs genetics, Neoplasms genetics
- Abstract
Single nucleotide polymorphisms (SNPs) are germline variations interspersed in the human genome. These subtle changes of DNA sequence can influence the susceptibility to various pathologies including cancer. The functional meaning of SNPs is not always clear, being, the majority of them, localized in noncoding regions. The discovery of microRNAs, tiny noncoding RNAs able to bind the 3' untranslated region (UTR) of target genes and to consequently downregulate their expression, has provided a functional explanation of how some SNPs positioned in noncoding regions contribute to cancer susceptibility. In this paper we summarize the current knowledge of the effect on cancer susceptibility of SNPs included in regions related with miRNA-dependent pathways. Hereditary cancer comes up from mutations that occur in high-penetrant predisposing tumor genes. However, a considerable part of inherited cancers arises from multiple low-penetrant predisposing gene variants that influence the behavior of cancer insurgence. Despite the established significance of such polymorphic variants in cancer predisposition, sometimes their functional role remains unknown. The discovery of a new group of genes called microRNAs (miRNAs) opened an avenue for the functional interpretation of polymorphisms involved in cancer predisposition.
- Published
- 2013
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- View/download PDF
25. A polymorphism of HMGA1 is associated with increased risk of metabolic syndrome and related components.
- Author
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Chiefari E, Tanyolaç S, Iiritano S, Sciacqua A, Capula C, Arcidiacono B, Nocera A, Possidente K, Baudi F, Ventura V, Brunetti G, Brunetti FS, Vero R, Maio R, Greco M, Pavia M, Hodoglugil U, Durlach V, Pullinger CR, Goldfine ID, Perticone F, Foti D, and Brunetti A
- Subjects
- Case-Control Studies, Demography, Female, Humans, Insulin Resistance genetics, Italy, Male, Middle Aged, Risk Factors, Turkey, Genetic Association Studies, Genetic Predisposition to Disease, HMGA1a Protein genetics, Metabolic Syndrome genetics, Polymorphism, Single Nucleotide genetics
- Abstract
The metabolic syndrome (MetS) is a common disorder, where systemic insulin-resistance is associated with increased risk for type 2 diabetes (T2D) and cardiovascular disease. Identifying genetic traits influencing risk and progression of MetS is important. We and others previously reported a functional HMGA1 gene variant, rs146052672, predisposing to T2D. Here we investigated the association of rs146052672 variant with MetS and related components. In a case-control study from Italy and Turkey, increased risk of MetS was seen among carriers of the HMGA1 variant. In the larger Italian cohort, this variant positively correlated with BMI, hyperglycemia and insulin-resistance, and negatively correlated with serum HDL-cholesterol. Association between rs146052672 variant and MetS occurred independently of T2D, indicating that HMGA1 gene defects play a pathogenetic role in MetS and other insulin-resistance-related conditions. Overall, our results indicate that the rs146052672 variant represents an early predictive marker of MetS, as well as a predictive tool for therapy.
- Published
- 2013
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26. Molecular identification of Bartonella quintana infection using species-specific real-time PCR targeting transcriptional regulatory protein (bqtR) gene.
- Author
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Liberto MC, Lamberti AG, Marascio N, Matera G, Quirino A, Barreca GS, Baudi F, and Focà A
- Subjects
- Bartonella Infections blood, Bartonella Infections microbiology, Bartonella henselae isolation & purification, Bartonella quintana isolation & purification, Base Sequence, Humans, Molecular Sequence Data, Sensitivity and Specificity, Species Specificity, Bacterial Typing Techniques, Bartonella Infections diagnosis, Bartonella henselae genetics, Bartonella quintana genetics, DNA, Bacterial blood, Real-Time Polymerase Chain Reaction methods
- Abstract
We describe a SYBR Green I-based real-time PCR targeting Bartonella quintana transcriptional regulatory protein (bqtR) gene, recently found as invariant gene among different B. quintana strains. Melting curve analysis allowed us to discriminate between B. quintana and Bartonella henselae amplified products. We also show its usefulness in the management of a blood culture-negative patient affected by enlarged cervical lymphonodes and long-lasting fever. B. quintana DNA detection in patient whole blood samples and blood culture bottles was confirmed by sequencing and analyzing amplified products., (Copyright © 2011 Elsevier Ltd. All rights reserved.)
- Published
- 2011
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27. A peroxisome proliferator-activated receptor gamma (PPARG) polymorphism is associated with zoledronic acid-related osteonecrosis of the jaw in multiple myeloma patients: analysis by DMET microarray profiling.
- Author
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Di Martino MT, Arbitrio M, Guzzi PH, Leone E, Baudi F, Piro E, Prantera T, Cucinotto I, Calimeri T, Rossi M, Veltri P, Cannataro M, Tagliaferri P, and Tassone P
- Subjects
- Aged, Aged, 80 and over, Case-Control Studies, Gene Frequency, Genetic Predisposition to Disease, Humans, Jaw Diseases genetics, Middle Aged, Polymorphism, Single Nucleotide, Zoledronic Acid, Bone Density Conservation Agents adverse effects, Diphosphonates adverse effects, Imidazoles adverse effects, Multiple Myeloma genetics, Osteonecrosis genetics, PPAR gamma genetics
- Published
- 2011
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28. Identification of a new mutation in the gene coding for hairless protein responsible for alopecia universalis: The importance of direct gene sequencing.
- Author
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Nucara S, Colao E, Mangone G, Baudi F, Fabiani F, Nocera D, Passafaro G, Longo T, Laria AE, Malatesta P, Amato R, Trapasso F, and Perrotti N
- Subjects
- Adult, Alopecia genetics, Alopecia pathology, Alopecia physiopathology, Chromosomes, Human, Pair 8, Female, Frameshift Mutation, Genetic Linkage, Genotype, Humans, Male, Mutation, Pedigree, Sequence Analysis, DNA, Transcription Factors physiology, Transcription Factors genetics
- Abstract
Mutations in the gene HR coding for the hairless protein are associated with atrichia with papular lesions (APL), an autosomal recessive form of alopecia universalis that is characterized by generalized scalp and body atrichia with papular lesions. We here describe a South Italian family of ancient Albanian heritage. The full phenotype with complete atrichia was expressed in 2 siblings, whereas the parents and one sister were unaffected. Direct sequencing of the gene coding for the hairless protein allowed the identification of a new mutation in exon 17. Consistent with the recessive inheritance of the disease, both the siblings were homozygous for the mutation, whereas the parents and the unaffected sister where heterozygous. A relevant discrepancy with a haplotype linkage study is reported, stressing the importance of gene sequencing in genetic diagnosis and counseling because linkage studies can be biased by recombination events.
- Published
- 2011
29. BRCA1/2 genetic background-based therapeutic tailoring of human ovarian cancer: hope or reality?
- Author
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Tagliaferri P, Ventura M, Baudi F, Cucinotto I, Arbitrio M, Di Martino MT, and Tassone P
- Abstract
Ovarian epithelial tumors are an hallmark of hereditary cancer syndromes which are related to the germ-line inheritance of cancer predisposing mutations in BRCA1 and BRCA2 genes. Although these genes have been associated with multiple different physiologic functions, they share an important role in DNA repair mechanisms and therefore in the whole genomic integrity control. These findings have risen a variety of issues in terms of treatment and prevention of breast and ovarian tumors arising in this context. Enhanced sensitivity to platinum-based anticancer drugs has been related to BRCA1/2 functional loss. Retrospective studies disclosed differential chemosensitivity profiles of BRCA1/2-related as compared to "sporadic" ovarian cancer and led to the identification of a "BRCA-ness" phenotype of ovarian cancer, which includes inherited BRCA1/2 germ-line mutations, a serous high grade histology highly sensitive to platinum derivatives. Molecularly-based tailored treatments of human tumors are an emerging issue in the "era" of molecular targeted drugs and molecular profiling technologies. We will critically discuss if the genetic background of ovarian cancer can indeed represent a determinant issue for decision making in the treatment selection and how the provocative preclinical findings might be translated in the therapeutic scenario. The presently available preclinical and clinical evidence clearly indicates that genetic background has an emerging role in treatment individualization for ovarian cancer patients.
- Published
- 2009
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30. Multiple head and neck tumours and their genetic relationship.
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Allegra E, Baudi F, La Boria A, Fagiani F, Garozzo A, and Costanzo FS
- Subjects
- Adult, Aged, Carcinoma, Squamous Cell genetics, Carcinoma, Squamous Cell pathology, Chromosomes, Human, Pair 11 genetics, Chromosomes, Human, Pair 13 genetics, Chromosomes, Human, Pair 17 genetics, Chromosomes, Human, Pair 3 genetics, Chromosomes, Human, Pair 9 genetics, Humans, Laryngeal Neoplasms genetics, Laryngeal Neoplasms pathology, Male, Microsatellite Repeats, Neoplasms, Second Primary genetics, Head and Neck Neoplasms genetics
- Abstract
Second primary tumours represent one of the major causes of failure in the treatment of head and neck cancer. Advances in early diagnosis and treatment have improved the patient's disease-specific survival. However, the increase in the occurrence of second primary tumours negatively influences the patient's chance of long-term survival. To understand the molecular events underlying the appearance of head and neck multiple tumours, the clinical history has been evaluated in 2 patients both of whom developed 3 primary tumours of the head and neck. To establish the genetic relationship between the different head and neck cancers which had developed in these 2 patients, loss of heterozygosity was investigated using microsatellite markers located on chromosomes 3p, 9p, 11q, 13q, and 17p. These markers were selected as they frequently demonstrate loss of heterozygosity in head and neck cancer. The following markers were used: D3S1234, D3S1300, D9S170, D11S490, and D17S158. Primer sequences were obtained from the genome database for all of these markers. The third tumour that developed in the first patient, 13 years after the primary, showed loss of heterozygosity on chromosome 17p (in the locus for the gene TP53), which was not present in the previous tumours. All tumours in the second patient showed heterozygosity of chromosome 11 at the locus D11S490. These 2 cases show that multiple tumours can be derived from a genetic alteration of a subclone from previous tumours or from an independent preneoplastic cell clone present in the head and neck mucosa.
- Published
- 2009
31. A proteomics approach to identify changes in protein profiles in serum of Familial Adenomatous Polyposis patients.
- Author
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Quaresima B, Crugliano T, Gaspari M, Faniello MC, Cosimo P, Valanzano R, Genuardi M, Cannataro M, Veltri P, Baudi F, Doldo P, Cuda G, Venuta S, and Costanzo F
- Subjects
- Adenomatous Polyposis Coli blood, Apolipoproteins D blood, Blotting, Western, Colorectal Neoplasms genetics, Genetic Predisposition to Disease, Haptoglobins genetics, Humans, Immunoglobulin G blood, Mass Spectrometry, Proteomics methods, Reference Values, Serum Albumin genetics, alpha-2-HS-Glycoprotein, Adenomatous Polyposis Coli genetics, Apolipoproteins D genetics, Blood Proteins genetics, Colorectal Neoplasms, Hereditary Nonpolyposis genetics, DNA Glycosylases genetics, Gene Expression Profiling, Proteome
- Abstract
Familial adenomatous polyposis (FAP) is one of the most important clinical hereditary forms of inherited susceptibility to colorectal cancer and is characterized by a high degree of phenotypic heterogeneity. We used a mass spectrometry driven-proteomic strategy to identify serum molecules differently expressed in FAP patients. The data obtained were subsequently processed by bioinformatic analysis and confirmed by Western blotting. Significant differences were highlighted in the expression of serum proteins of FAP patients. In particular, two proteins (alpha-2-HS-glycoprotein and apoliprotein D) were down-regulated (about 0.5- and 0.7-fold, respectively) in carpeting versus diffuse FAP patients and healthy donors, while alpha-2-antiplasmin was up-regulated (about 1.4-fold). Moreover, mass spectrometry approach enabled us to identify serum biomarkers specific for two distinct clinical form of FAP, i.e. carpeting and diffuse FAP. In particular, vitronectin was up-regulated (more than 1.4-fold) in diffuse FAP patients versus carpeting FAP and versus healthy donors, and two additional proteins (Haptoglobin and alpha-1-acid glycoprotein 1) were up-regulated in 2 out of 3 carpeting FAP patients. Our study suggests that mass spectrometry combined to a strong bioinformatics analysis is a valuable tool for the identification of quali/quantitative differences in the serum proteome of otherwise indistinguishable FAP phenotypes. Moreover, the definition of a proteomic profile, supported by the supervised classification, is a powerful and highly sensitive approach for the identification molecular signatures that are able to outperform the traditional disease markers and can therefore be efficiently applied for the diagnosis and clinical management of FAP patients.
- Published
- 2008
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32. BRCA1 5083del19 mutant allele selectively up-regulates periostin expression in vitro and in vivo.
- Author
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Quaresima B, Romeo F, Faniello MC, Di Sanzo M, Liu CG, Lavecchia A, Taccioli C, Gaudio E, Baudi F, Trapasso F, Croce CM, Cuda G, and Costanzo F
- Subjects
- Breast Neoplasms metabolism, Cell Adhesion Molecules metabolism, Cell Line, Tumor, Female, Founder Effect, Gene Expression Profiling, HeLa Cells, Humans, Immunohistochemistry, Oligonucleotide Array Sequence Analysis, Up-Regulation, Breast Neoplasms genetics, Cell Adhesion Molecules genetics, Gene Expression Regulation, Neoplastic, Genes, BRCA1, Mutation
- Abstract
Purpose: The aim of this study was to explore the gene expression pattern produced by the cancer-associated BRCA1 5083del19 founder mutation by using a microarray analysis. Such a mutation, identified in a subset of familial breast cancer patients, involves a deletion at the 3' end of the BRCA1 messenger leading, in the mature protein, to the ablation of the BRCT tandem domain., Experimental Design: We generated HeLa cells stably expressing both exogenous wild-type (HeLa/(wt)BRCA1), used as a control, and 5083del19 BRCA1 (HeLa/(5083del19)BRCA1) alleles; gene chips were then used to investigate any changes in the transcription profile induced by the 5083del19 BRCA1 mutant compared with controls., Results: Among the genes showing perturbation of their expression, periostin was found to be up-regulated in HeLa/(5083del19)BRCA1 cells to an extent of 72-fold versus HeLa/(pcDNA3.1/empty) and 76-fold versus HeLa/(wt)BRCA1 cells. This finding was validated both in vitro in breast cancer cell lines harboring mutations of BRCA1 and in vivo by immunohistochemistry of breast cancer specimens bearing the 5083del19 BRCA1 mutation as well as by Western blot analysis of sera obtained from patients and healthy carriers of the same mutation., Conclusions: Our results suggest that periostin overexpression, whose product is released from cells in the extracellular fluids, might be a potential marker for early cancer detection in a specific subset of hereditary breast carcinomas triggered by cancer-associated BRCA1 mutations that affect the BRCT tandem domain.
- Published
- 2008
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33. p53-mediated downregulation of H ferritin promoter transcriptional efficiency via NF-Y.
- Author
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Faniello MC, Di Sanzo M, Quaresima B, Baudi F, Di Caro V, Cuda G, Morrone G, Del Sal G, Spinelli G, Venuta S, and Costanzo F
- Subjects
- Chromatin Immunoprecipitation, Down-Regulation drug effects, Doxorubicin pharmacology, Gene Expression Regulation, Neoplastic drug effects, HCT116 Cells, HeLa Cells, Humans, Protein Binding drug effects, Tumor Suppressor Protein p53 antagonists & inhibitors, Tumor Suppressor Protein p53 chemistry, p300-CBP Transcription Factors metabolism, Apoferritins genetics, CCAAT-Binding Factor metabolism, Down-Regulation genetics, Promoter Regions, Genetic genetics, Transcription, Genetic drug effects, Tumor Suppressor Protein p53 metabolism
- Abstract
The tumor suppressor protein p53 triggers many of the cellular responses to DNA damage by regulating the transcription of a series of downstream target genes. p53 acts on the promoter of the target genes by interacting with the trimeric transcription factor NF-Y. H ferritin promoter activity is tightly dependent on a multiprotein complex called Bbf; on this complex NF-Y plays a major role. The aim of this work was to study the modulation of H ferritin expression levels by p53. CAT reporter assays indicate that: (i) p53 overexpression strongly downregulates the transcriptional efficiency driven by an H ferritin promoter construct containing only the NF-Y recognition sequence and that the phenomenon is reverted by p53 siRNA; (ii) the p53 C-terminal region is sufficient to elicitate this regulation and that a correct C-terminal acetylation is also required. The H ferritin promoter displays no p53-binding sites; chromatin immunoprecipitation assays indicate that p53 is recruited on this promoter by NF-Y. The p53-NF-Y interaction does not alter the NF-Y DNA-binding ability as indicated by electrophoretic mobility shift assay (EMSA) analysis. These results demonstrate that the gene coding for the H ferritin protein belongs to the family of p53-regulated genes, therefore adding a new level of complexity to the regulation of the H ferritin transcription and delineate a role for this protein in a series of cellular events triggered by p53 activation.
- Published
- 2008
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34. Specific changes in the proteomic pattern produced by the BRCA1-Ser1841Asn missense mutation.
- Author
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Crugliano T, Quaresima B, Gaspari M, Faniello MC, Romeo F, Baudi F, Cuda G, Costanzo F, and Venuta S
- Subjects
- Amino Acid Substitution, BRCA1 Protein genetics, Biomarkers, Tumor genetics, Breast Neoplasms genetics, Carrier Proteins genetics, Female, Folate Receptors, GPI-Anchored, Gene Expression Regulation, Neoplastic genetics, Genetic Predisposition to Disease, HeLa Cells, Humans, Neoplasm Proteins genetics, Ovarian Neoplasms genetics, Ovarian Neoplasms metabolism, Proteomics, Receptors, Cell Surface genetics, BRCA1 Protein biosynthesis, Biomarkers, Tumor biosynthesis, Breast Neoplasms metabolism, Carrier Proteins biosynthesis, Mutation, Missense, Neoplasm Proteins biosynthesis, Receptors, Cell Surface biosynthesis
- Abstract
BRCA1 is a nuclear phosphoprotein that plays a key role in many cell functions, including DNA repair, control of transcription, recombination and cell cycle homeostasis. Inherited missense mutations in the BRCA1 gene may predispose to breast and ovarian cancer, but the molecular mechanisms underlying BRCA1-induced tumorigenesis are still to be elucidated. Functional studies performed so far have contributed to the characterization of several single-nucleotide variants, mostly located at the BRCT domain, but very little is known about modifications in the protein pattern occurring in cells carrying these mutations. To shed more light in the molecular events triggered by missense mutations affecting breast cancer susceptibility genes, we have analyzed the whole cell proteome of stably transfected HeLa cell lines bearing three distinct single aminoacid changes in the BRCA1 protein (Ser1841Asn, Met1775Arg and Trp1837Arg) by means of liquid chromatography coupled to tandem-mass spectrometry. The results show that the Met1775Arg and the Trp1837Arg do not produce significant changes in the proteomic pattern compared to cells transfected with the wild-type BRCA1 cDNA. On the other hand, a different profile is detected in the BRCA1 Ser1841Asn-bearing cell line. In this particular subset, our attention has been focused on two proteins--the tumor protein D52 (TD52) and the folate receptor alpha (FOL1)--whose expression has been already reported to be upregulated in breast cancer, as well as in other tumors. Our findings indicate that Ser1841Asn BRCA1 mutation is able to activate specific protein pathways that are not triggered by other single aminoacid changes and pinpoint to the role TD52 and FOL1 as potential markers in breast cancer patients carrying this particular BRCA1 gene alteration.
- Published
- 2007
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35. Missense mutations of BRCA1 gene affect the binding with p53 both in vitro and in vivo.
- Author
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Quaresima B, Faniello MC, Baudi F, Crugliano T, Di Sanzo M, Cuda G, Costanzo F, and Venuta S
- Subjects
- Agar chemistry, Alleles, Breast Neoplasms metabolism, Cell Proliferation, Escherichia coli metabolism, Female, HeLa Cells, Humans, In Vitro Techniques, Models, Genetic, Protein Binding, Protein Structure, Tertiary, Breast Neoplasms genetics, Genes, BRCA1, Mutation, Missense, Tumor Suppressor Protein p53 metabolism
- Abstract
Women with BRCA1 gene mutations have an increased risk for breast and ovarian cancer (BOC). Classification of missense variants as neutral or disease causing is still a challenge and has major implications for genetic counseling. BRCA1 is organized in an N-terminal ring-finger domain and two BRCT (breast cancer C-terminus) domains, involved in protein-protein interaction. The integrity of the C-terminal, BRCT repeat region is also critical for BRCA1 tumor suppressor function. Several molecular partners of BRCA1 have so far been identified; among them, the tumor suppressor protein p53 seems to play a major role. This study was aimed at evaluating the impact of two missense mutations, namely the W1837R and the S1841N, previously identified in BOC patients and located in the BRCT domain of the BRCA1 gene, on the binding capacity of this protein to p53. Co-immunoprecipitation assays of E. coli-expressed wild-type and mutated BRCTs challenged with a HeLa cell extract revealed, for the S1841N variant a significant reduction in the binding activity to p53, while the W1837R mutant showed an inverse effect. Furthermore, a clonogenic soft agar growth assay performed on HeLa cells stably transfected with either wild-type or mutant BRCA1 showed a marked decrease of the growth in wild-type BRCA1-overexpressing cells and in BRCA1S1841N-transfected cells, while no significant changes were detected in the BRCA1W1837R-transfected cells. These results demonstrate that: i) distinct single nucleotide changes in the BRCT domain of BRCA1 affect binding of this protein to the tumor suppressor p53, and ii) the two missense mutations here described are likely to play a role in breast tumorigenesis. We suggest that in vitro/in vivo experiments testing the effects of unclassified BRCA1 gene variants should therefore be taken in to consideration and that increased surveillance should be adopted in individuals bearing these two BRCA1 missense alterations.
- Published
- 2006
36. Detection and functional analysis of an SNP in the promoter of the human ferritin H gene that modulates the gene expression.
- Author
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Faniello MC, Fregola A, Nisticò A, Quaresima B, Crugliano T, Faraonio R, Puzzonia P, Baudi F, Parlato G, Cuda G, Morrone G, Venuta S, and Costanzo F
- Subjects
- Alleles, Base Sequence, Binding Sites genetics, CCAAT-Binding Factor metabolism, DNA genetics, DNA metabolism, Gene Expression, HeLa Cells, Humans, In Vitro Techniques, Protein Binding, RNA, Messenger genetics, RNA, Messenger metabolism, Sp1 Transcription Factor metabolism, Transcription, Genetic, Ferritins genetics, Polymorphism, Single Nucleotide, Promoter Regions, Genetic
- Abstract
The H ferritin promoter spans approximately 150 bp, upstream of the transcription start and is composed by two cis-elements in position -132 (A box) and -62 (B-box), respectively. The A box is recognized by the transcription factor Sp1, and the B-box by a protein complex called Bbf, which includes the CAAT binding factor NF-Y. In this study we performed a functional analysis of an H ferritin promoter allele carrying a G to T substitution adjacent to the Bbf binding site, in position -69. In vitro studies with reporter constructs revealed a significantly reduced transcriptional activity of this allele compared to that of the w.t. promoter that was mirrored by a decrease in Bbf binding. In vivo, this variant genotype is accompanied by a reduced amount of the H mRNA in peripheral blood lymphocytes.
- Published
- 2006
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37. In vitro analysis of genomic instability triggered by BRCA1 missense mutations.
- Author
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Quaresima B, Faniello MC, Baudi F, Crugliano T, Cuda G, Costanzo F, and Venuta S
- Subjects
- Adaptor Proteins, Signal Transducing, Alleles, BRCA1 Protein chemistry, BRCA1 Protein metabolism, Binding Sites, DNA Repair physiology, HeLa Cells, Humans, Microsatellite Repeats, Models, Genetic, MutL Protein Homolog 1, Phenotype, Protein Structure, Tertiary, Transfection, BRCA1 Protein genetics, Breast Neoplasms genetics, Carrier Proteins metabolism, Genes, BRCA1, Genomic Instability, Mutation, Missense, Nuclear Proteins metabolism
- Abstract
The BRCA1 tumor suppressor gene encodes a phosphoprotein involved in many cellular key functions including DNA repair, transcription regulation, cell-cycle control and apoptosis. Most of these functions are strictly related to the ability of BRCA1 to interact with the other partners of a multimeric complex called BASC. Among these components, an important role is played by the human homolog of the bacterial MutL, MLH1. In this study, we have identified the BRCA1 binding domains to MLH1 and demonstrated that three distinct mutations in one of these interaction domains can produce, in vitro, a microsatellite instability phenotype, one of the hallmarks of an imbalance in the mismatch DNA repair machinery. These data support a model in which a structural modification in a critical domain of the BRCA1 gene product secondary to single amino acid mutations, may be able, per se, to impair the DNA damage response pathway, inducing genomic instability and eventually leading to breast carcinogenesis., (Copyright 2006 Wiley-Liss, Inc.)
- Published
- 2006
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38. A novel missense germline mutation in exon 2 of the hMSH2 gene in a HNPCC family from Southern Italy.
- Author
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Baudi F, Fersini G, Lavecchia A, Terracciano R, Leone F, Quaresima B, Faniello MC, De Paola L, Doldo P, Cuda G, Costanzo F, and Venuta S
- Subjects
- Adult, Base Pair Mismatch, Case-Control Studies, DNA Mutational Analysis, DNA Repair, DNA Repair Enzymes, Exons, Female, Gene Expression Regulation, Neoplastic, Germ-Line Mutation, Humans, Immunohistochemistry, Italy, Male, Microsatellite Repeats, MutS Homolog 2 Protein, Pedigree, Colorectal Neoplasms genetics, Colorectal Neoplasms, Hereditary Nonpolyposis genetics, DNA-Binding Proteins genetics, Genetic Predisposition to Disease, Mutation, Missense, Proto-Oncogene Proteins genetics
- Abstract
Germline mutations within the mismatch repair (MMR) genes are generally found in colorectal cancer (CRC) patients with a positive family history for the presence of the neoplasia. Clinical standard criteria have been established to define hereditary-non-polyposis-colorectal cancer (HNPCC)-prone families. Interestingly, the number of MMR gene mutations found in kindreds not fulfilling these criteria is still increasing. In this work we report the identification of a novel germline mutation of the hMSH2 gene, in two CRC-bearing subjects. The two probands belong to a large kindred from South Italy with no history suggestive for cancer aggregation. On the other hand, the early-onset of the neoplasia as well as the presence of a high number of tumor infiltrating lymphocytes (TILs) in the histological specimens of both patients, prompted us to perform a comprehensive genetic analysis. This analysis included the evaluation of the microsatellite instability (MSI) status with five markers according to the National Cancer Institute recommendations, followed by direct sequencing of the hMLH1 and hMSH2 genes. Both probands were found to carry a germline missense (277 C>T) mutation leading to the change (L93F) of an amino acid residue in a highly conserved domain of the MSH2 protein. This mutation is accompanied by the loss of expression of the hMSH2 gene in the tumor tissue. Our findings suggest that in the presence of the above-mentioned criteria it may be useful to perform a molecular analysis of the MMR genes, even if the pedigree does not show marked aggregation of cancers.
- Published
- 2005
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39. The tyrosine phosphatase PTPRJ/DEP-1 genotype affects thyroid carcinogenesis.
- Author
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Iuliano R, Le Pera I, Cristofaro C, Baudi F, Arturi F, Pallante P, Martelli ML, Trapasso F, Chiariotti L, and Fusco A
- Subjects
- Adenoma etiology, Adenoma genetics, Adenoma metabolism, Carcinoma genetics, Carcinoma metabolism, Cell Transformation, Neoplastic metabolism, Gene Frequency, Genetic Markers, Humans, Polymorphism, Genetic, Protein Tyrosine Phosphatases metabolism, Receptor-Like Protein Tyrosine Phosphatases, Class 3, Thyroid Gland metabolism, Thyroid Gland pathology, Thyroid Neoplasms genetics, Thyroid Neoplasms metabolism, Carcinoma etiology, Cell Transformation, Neoplastic genetics, Protein Tyrosine Phosphatases genetics, Thyroid Neoplasms etiology
- Abstract
We recently isolated the r-PTPeta gene, which encodes a receptor-type tyrosine phosphatase protein that suppresses the neoplastic phenotype of retrovirally transformed rat thyroid cells. The human homologue gene PTPRJ/DEP-1 is deleted in various tumors. Moreover, the Gln276Pro polymorphism, located in the extracellular region of the gene, seems to play a critical role in susceptibility to some human neoplasias. Here we report the loss of heterozygosity (LOH) of PTPRJ in 11/76 (14.5%) informative thyroid tumors (including adenomas and carcinomas). We also looked for the Gln276Pro, Arg326Gln and Asp872Glu polymorphisms in exons 5, 6 and 13 of PTPRJ in 88 patients with thyroid tumors and in 54 healthy individuals. We found that the PTPRJ genotypes homozygous for the Gln276Pro and Arg326Gln polymorphisms, and the Asp872 allele were more frequent in thyroid carcinoma patients than in healthy individuals (P=0.032). In addition, PTPRJ LOH was more frequent in thyroid carcinomas of heterozygotes for Gln276Pro and Arg326Gln compared with homozygotes (P=0.006). This suggests that the presence of hemizygosity for these polymorphisms in the tumor facilitates tumor progression. These results indicate that the genotypic profile of PTPRJ affects susceptibility to thyroid carcinomas, and that allelic loss of this gene is involved in thyroid carcinogenesis.
- Published
- 2004
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40. BRCA2 germline mutations in primary cancer of the fallopian tube.
- Author
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Casarsa S, Puglisi F, Baudi F, De Paola L, Venuta S, Piga A, Di Loreto C, Marchesoni D, D'Elia AV, and Damante G
- Subjects
- Age Factors, Aged, Breast Neoplasms genetics, Family Health, Female, Humans, Middle Aged, Mutation, Ovarian Neoplasms genetics, Pedigree, Polymorphism, Genetic, Time Factors, Fallopian Tube Neoplasms genetics, Genes, BRCA2, Germ-Line Mutation
- Abstract
Germline mutations of BRCA1 and BRCA2 genes confer susceptibility to breast and ovarian cancer. It has been recently reported that BRCA1/2 mutations may also predispose to fallopian tube cancer. We report the presence of germline BRCA2 gene mutations in three out of four subjects with fallopian tube cancer diagnosed in a two-year time span at our clinic. The mothers of two of these women suffered from breast or ovarian carcinoma. These results suggest on one hand that in patients with a history suggestive for a heredofamilial breast/ovarian cancer syndrome fallopian tube carcinoma is associated with high risk of BRCA2 mutation, and on the other hand that in patients/individuals with germline BRCA2 gene mutations in whom a prophylactic oophorectomy is performed, removal of fallopian tubes may be considered.
- Published
- 2004
41. A novel Q3034R BRCA2 germline mutation identified in a fallopian tube cancer patient.
- Author
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Baudi F, De Paola L, Quaresima B, Faniello MC, Fersini G, Gasparro S, Fabiani G, Driul L, D'Elia A, Casarsa S, Marchesoni D, Damante G, Cuda G, Costanzo F, and Venuta S
- Subjects
- Adult, Deoxyribonucleases, Type II Site-Specific metabolism, Fallopian Tube Neoplasms pathology, Female, Humans, Polymerase Chain Reaction, Polymorphism, Single-Stranded Conformational, Prognosis, Fallopian Tube Neoplasms genetics, Genes, BRCA2, Genetic Predisposition to Disease, Germ-Line Mutation
- Abstract
Fallopian tube cancer (FTC) accounts for 0.1-0.5% of all gynaecological malignancies, so that very few studies have demonstrated a significant linkage between this cancer type and BRCA1/BRCA2 mutations. We report the identification of a novel germline mutation (Q3034R) in BRCA2 gene in a 41-year-old patient. The nucleotide change (CAG > CGG) abolishes a DdeI restriction site, making genotype identification rapid and inexpensive. Our findings support the hypothesis that the primary FTC should be considered, at least in a subset of patients, as a BRCA2-associated tumor. Genetic counselling could result, in these cases, in early diagnosis of genetically predisposed individuals., (Copyright 2002 Elsevier Science Ireland Ltd.)
- Published
- 2003
- Full Text
- View/download PDF
42. Evidence of a founder mutation of BRCA1 in a highly homogeneous population from southern Italy with breast/ovarian cancer.
- Author
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Baudi F, Quaresima B, Grandinetti C, Cuda G, Faniello C, Tassone P, Barbieri V, Bisegna R, Ricevuto E, Conforti S, Viel A, Marchetti P, Ficorella C, Radice P, Costanzo F, and Venuta S
- Subjects
- Adult, Alleles, DNA Mutational Analysis, Ethnicity genetics, Exons genetics, Female, Haplotypes genetics, Humans, Introns genetics, Italy ethnology, Microsatellite Repeats genetics, Middle Aged, Polymorphism, Single-Stranded Conformational, Breast Neoplasms genetics, Founder Effect, Genes, BRCA1, Mutation genetics, Ovarian Neoplasms genetics
- Abstract
Several genes have been involved in the pathogenesis of hereditary breast/ovarian cancer (BOC), but mutations in the BRCA1 gene are by far the most recurrent. In this study, we report the identification of a founder mutation in a geographically and historically homogeneous population from Calabria, a south Italian region. A screening performed on 24 patients from unrelated families highlighted the high prevalence of a 5083del19 alteration in the BRCA1 gene, which accounts for 33% of the overall gene mutations. The same mutation was also detected in 4 patients, all of Calabrian origin, referred to us by research centres from the north of Italy. Allelotype analysis, performed on probands and unaffected family members revealed the presence a common allele, therefore suggesting a founder effect due to a common ancestor. Our findings underscore the importance of ethnic background homogeneity in patients' selection and highlight the usefulness of founder mutations as a potential tool for optimisation of preclinical diagnosis in gene carriers and therapeutic approaches in affected individuals., (Copyright 2001 Wiley-Liss, Inc.)
- Published
- 2001
- Full Text
- View/download PDF
43. Hereditary nonpolyposis coloretal cancer: identification of novel germline mutations in two kindreds not fulfulling the Amsterdam criteria. Mutations in brief no. 203. Online.
- Author
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Quaresima B, Grandinetti C, Baudi F, Tassone P, Barbieri V, Conforti S, Avvedimento EV, Costanzo F, and Venuta S
- Subjects
- Adaptor Proteins, Signal Transducing, Base Pair Mismatch, Carrier Proteins, Codon, Terminator genetics, Humans, MutL Protein Homolog 1, Mutation, Missense, Neoplasm Proteins genetics, Nuclear Proteins, Colorectal Neoplasms, Hereditary Nonpolyposis genetics, Germ-Line Mutation
- Abstract
Hereditary nonpolyposis colon cancer results from heritable defects in the MLH1, MSH2, PMS1 and PMS2 genes, which encode proteins involved in the mismatch repair process. In this work we report the identification of two novel germline mutations in the MLH1 gene from two unrelated HNPCC families. The two affected families do not fulfill the Amsterdam criteria. In family 1 we found a missense S93G mutation, which lies in a MLH1 domain critical for its MMR functions. In family 2 we found a two nucleotide insertion (AG) in position 523 from the AUG which determines an early stop codon at position 606 (codon 203). In both families the mutant alleles cosegregate with the cancer phenotype.
- Published
- 1998
- Full Text
- View/download PDF
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