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The sampling of touch DNA from paper documents is often achieved by simply excising pieces of the document. This generates high-quality DNA profiles but also damages evidence; thus, we investigated non-destructive sampling of paper documents for touch DNA. Exploratory and confirmatory studies were performed to identify a non-destructive technique that generated excision-comparable STR profiles. Sampling with adhesive portions of sticky notes performed well in the initial exploratory study: in the confirmatory study this adhesive-based technique generated profiles of comparable completeness to conventional excision, with no significant difference in profile completeness found between the two. The sticky-note technique performs comparably to excision in generating STR profiles from paper, whilst preserving exhibit integrity. Crown Copyright © [2019] Published by Elsevier Ireland Ltd. This is an open access article under the Open Government Licence (OGL) (http://www.nationalarchives.gov.uk/doc/open-government-licence/version/3/). [ABSTRACT FROM AUTHOR]

Over the centuries, various types of paper have been produced, each characterized by a different ratio of natural macromolecules, mainly lignin and cellulose. Handmade paper has a higher content of cellulose with respect to the early machine-made paper, where lignin is the other important component. Microorganisms are able to colonize and deteriorate both types. They can release on their surfaces pigments and colorants which produced anesthetic stains. To better understand the microbiota colonizing these stains, 17 samples were analyzed, from both handmade and machine-made paper surfaces, as well as library and archive environments. Combination of microbiological and high-throughput sequencing (HTS) approaches were applied. The culture-dependent methodology comprised: isolation, DNA identification, hydrolytic and paper staining assays. The HTS was performed by MinION platform and for the mycobiome a more suitable bioinformatics analysis pipeline, MetONTIIME based on QIIME2 framework, was applied. The paper model staining assay permitted the direct recognition of colorizing isolates which in combination with sequencing data evidenced a complex microbial community able to stain the two types of paper. Staining abilities were confirmed by frequently isolated and detected fungi as well as newly discovered ones Roussoella euonymi and Achaetomium. We have also evidenced the staining ability of several bacteria. [ABSTRACT FROM AUTHOR]

Abstract: The brownish spots known as foxing, commonly found on old paper artefacts contain sometimes structures, which look like filamentous fungi. Attempts to grow these structures in vitro have been always unsuccessful so far. In order to study the role of these biological elements in paper decay, it is essential to identify them. This study is aimed at the identification of isolates from these brownish areas by culture-independent approaches using molecular biology techniques. The two Internal Transcribed Spacers and the 5.8 S gene (ITS1-5.8S-ITS2) from the nuclear ribosomal DNA were amplified, cloned and sequenced. Following a preliminary treatment with cellulase from Trichoderma reesei, DNA extractions were successfully achieved directly from paper samples. From 22 selected stained spots from a book dating from the 19th century, 8 extracts of genomic DNA were entirely analysed, which yielded 145 sequenced clones. No DNA could be sampled in unstained areas. Multiple alignment of the ITS sequences and comparison with reference sequences published in the NCBI database allowed to identify 14 groups of fungi belonging mainly to the following genera: Aspergillus, Bjerkandera, Chaetomium, Gloeotinia, Penicillium, Polyporus, Saccharicola, Trichoderma and Ulocladium. Some of these fungi are cellulolytic species but are not commonly found as indoor contaminant in storage rooms of graphic documents. The majority of the foxing spots exhibited sequences identified as Penicillium minioluteum. Gloeotinia temulenta occurred also frequently. Few isolates such as Aspergillus japonicus, Aspergillus oryzae, Chaetomium globosum, Penicillium citrinum, Trichoderma citrinoviride, Ulocladium chartarum and Ulocladium cucurbitae were present in only 1 or 2 clones. One of the foxing spots produced only one type of sequence similar to both Cordyceps sinensis and Fusarium lateritium, which have identical sequences in this rDNA region. This molecular approach, simple and rapid, could provide additional data for further discussion on the origin of the phenomenon of biological foxing. [Copyright &y& Elsevier]