602 results
Search Results
2. The structure of N-linked oligosaccharides of human pancreatic bile-salt-dependent lipase.
- Author
-
Sugo, Tsukasa, Mas, Eric, Abouakil, Nezha, Endo, Tamao, Escribano, Maria-Juana, Kobata, Akira, and Lombardo, Dominique
- Subjects
OLIGOSACCHARIDES ,LIPASES ,PANCREATIC secretions ,CHROMATOGRAPHIC analysis ,PAPER electrophoresis ,GLYCOSIDASES - Abstract
This study describes the structure of the N-linked oligosaccharide chains of bile-salt-dependent lipase isolated from the pancreatic juice of a normal donor. After hydrazinolysis, neutral sugar chains were separated from acidic chains by paper electrophoresis and were fractionated using serial column chromatography with immobilized lectins and Bio-Gel P-4 filtration. Structural analysis was performed by means of sequential glycosidase digestion and revealed that the neutral sugar chains are mainly of the biantennary complex type. Fucose residues were identified for some trimannosyl core structures and were α(1–6) or α(1–2) linked to the innermost GlcNAc residue and a terminal Gal residue, respectively. Sialyl residues were also involved in the oligosaccharide structures. Most of these structures have no linear N-acetyllactosamine repeats. Evidence from several approaches suggests that the sugar chains of the human pancreatic bile-salt-dependent lipase possess a blood-group-related antigenic determinant. [ABSTRACT FROM AUTHOR]
- Published
- 1993
- Full Text
- View/download PDF
3. Oil fingerprint identification technology using a simplified set of biomarkers selected based on principal component difference.
- Author
-
Zhang, Lujun, Du, Fei, Wang, Yan, Li, Yingde, Yang, Chun, Li, Sensen, Huang, Xiaodong, and Wang, Chunyan
- Subjects
GAS chromatography/Mass spectrometry (GC-MS) ,BIOMARKERS ,CHROMATOGRAPHIC analysis ,PRINCIPAL components analysis ,HIERARCHICAL clustering (Cluster analysis) - Abstract
Gas chromatography–mass spectrometry (GC–MS), which can separate and quantify thousands of individual petroleum biomarker compounds, is generally acknowledged as the most powerful technique for oil fingerprinting nowadays. Traditional oil fingerprint studies employ the whole suite of biomarkers measured in chromatographic analysis, which is prone to introducing ambiguous variables in the whole set and being time and labour intensive. To extract the most representative and meaningful indicators for the oil fingerprinting and identification, this paper proposes a method based on principal component difference to select a simplified set of biomarkers, providing the possibility of faster elution and analysis procedures. For the purpose of further verifying the reliability and accuracy of our method, identification simulation experiments including principal component analysis (PCA) spatial clustering, hierarchical clustering, and generalized regression neural network are carried out with the whole set and the simplified set of biomarkers, respectively. All the results and analyses demonstrate that the simplified set of biomarkers selected by our proposed method can achieve almost the same or even better identification results than those of the whole set of biomarkers. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
4. Photolysis of Desmosine and Isodesmosine by Ultraviolet Light.
- Author
-
Baurain, Roger, Larochelle, Jean-François, and Lamy, François
- Subjects
PHOTOCHEMISTRY ,ION exchange (Chemistry) ,RADIATION ,CHROMATOGRAPHIC analysis ,AMINO acids ,GLUTACONIC acid - Abstract
1. Desmosine and isodesmosine were separated by ion-exchange and paper chromatography, after acid hydrolysis of purified elastin from beef ligamentum nuchae. The fractions obtained by ion- exchange chromatography were clearly mixtures of related compounds. The desmosine fraction could be resolved into seven compounds and the isodesmote into four by paper charmatography. 2. Desmosine was maximally degraded by irradiation at 274 nm and isodesmosine at 285 nm. These wavelengths did not correspond to the absorption maxima of the cross links, but to shoulders of the main absorption peaks. 3. When irradiated at their optimum wavelengths, but at various pH, both desmosine and isodesmosine seemed quite stable at pH greater than 8.5. Between pH 8 and 5, the photolytic rate was maximum and decreased slightly at more acidic pH. Below pH 4.0, one of the products of photolysis was free lysine. 4. In analogy to the mechanism of the photolytic degradation of N-methyl pyridinium chloride, it appears that the (iso)desmosines were degraded via the formation of an open amino aldehyde, which was hydrolysed at acid pH to give free lysine and a substituted glutaconic aldehyde. [ABSTRACT FROM AUTHOR]
- Published
- 1976
- Full Text
- View/download PDF
5. A Urinary Pentasaccharide in Bovine Mannosidosis.
- Author
-
Lundblad, Arne, Nilsson, Bo, Nordén, Nils E., Svensson, Sigfrid, Öckerman, Per-Arne, and Jolly, Robert D.
- Subjects
SACCHARIDES ,CARBOHYDRATES ,ELECTROPHORESIS ,CHROMATOGRAPHIC analysis ,NUCLEAR magnetic resonance spectroscopy ,OLIGOSACCHARIDES - Abstract
Abnormally high amounts of low molecular weight mannose-rich carbohydrate material were found in the urine of an Angus calf with mannosidosis. At least five oligosaccharide fractions were detected by paper chromatography. The most abundant compound was purified by gel chromatography, zone electrophoresis, and two consecutive preparative paper chromatographic steps. The yield was 10 mg/liter of urine. From structural studies including nuclear magnetic resonance spectroscopy, optical rotation, sugar analysis, methylation analysis, and partial enzymatic degradation the following structure was deduced: α-D-Manp- (1 → 6)-β-D-Manp-(1 → 4)-β-D-GlcNAcp-(1 → 4)-β-D-GlcNAcp-(1 → 4)-D-GlcNAc. This oligosaccharide is distinct from all the oligosaccharides previously described which are excreted by patients with mannosidosis. [ABSTRACT FROM AUTHOR]
- Published
- 1975
- Full Text
- View/download PDF
6. Identification of Ribitol Phosphate as a Constituent of the Lipopolysaccharide from <em>Proteus mirabilis</em>, Strain D52.
- Author
-
Gmeiner, Jobst
- Subjects
POLYOLS ,ENDOTOXINS ,MICROBIAL polysaccharides ,PROTEUS (Bacteria) ,HYDROLYSIS ,CHROMATOGRAPHIC analysis - Abstract
A polyol was released from the lipopolysaccharide of Proteus mirabilis, strain D52, during alkaline hydrolysis and its phosphate ester was isolated after acid hydrolysis. This polyol has been identified as ribitol by comparison of the free polyol, its phosphate ester and its anhydro derivative formed after acid treatment with authentic xylitol, D- and L-arabitol, ribitol and their corresponding derivatives on paper and gas-liquid chromatography. [ABSTRACT FROM AUTHOR]
- Published
- 1975
- Full Text
- View/download PDF
7. Antigens and allergens in <em>Dermatophagoïdes farinae</em> mite II. PURIFICATION OF AG 11, A MAJOR ALLERGEN IN <em>DERMATOPHAGOÏDES FARINAE</em>.
- Author
-
Dandeu, J.-P., Le Mao, J., Lux, M., Rabillon, J., and David, B.
- Subjects
ALLERGENS ,DERMATOPHAGOIDES ,AMMONIUM sulfate ,PHYSIOLOGICAL effects of ammonium sulfate ,CHROMATOGRAPHIC analysis ,ANTIGENS - Abstract
Ammonium sulphate precipitation and DEAE chromatography is an efficient way of purifying Ag 11, the main allergen in Dermatophagoïdes farinae mites, which has already been characterized by crossed radioimmunoelectrophoresis. At 60% of saturation in ammonium sulphate, a precipitate is formed which, dissolved and dialysed has been named fraction A 60. It is mainly composed of Ag 11. In the fraction DE obtained by DEAE chromatography of the ammonium sulphate fraction A 60, Ag 11 appears homogeneous on crossed-immunoelectrophoresis. Isoelectrofocusing results indicate an average isoelectric point near neutrality in agreement with the non-absorbtion of Ag 11 on the DEAE cellulose at a weak ionic strength (0.01, at pH 7.2). By sodium dodecyl sulphate polyacrylamide gel electrophoresis (SDS-PAGE) and gel filtration Ag 11 has a molecular weight of 28,000. Ag 11 appears as a single polypeptidic chain with numerous dithio-bonds implying a highly folded and resistant structure. Oligosaccharides could be present as constituting molecules as well as contaminating ones as was assumed for henosamines. These results are discussed with reference to a similar study performed on the major allergen of Dermatophagoïtes pteronyssinus. The allergenic properties of Ag 11 as present in fraction DE were tested by RAST-based methods. Fraction DE is an inhibitor as good as Df 80d and when it is coated on paper discs it can bind specific IgE in sera from the majority of mite sensitive patients. The results suggest that Ag 11 is a major allergen from D. farinae. [ABSTRACT FROM AUTHOR]
- Published
- 1982
8. Single-step elongation of oligodeoxynucleotides using terminal deoxynucleotidyl transferase.
- Author
-
Schott, Herbert and Schrade, Herbert
- Subjects
DEOXYRIBONUCLEOTIDES ,CHROMATOGRAPHIC analysis ,CAPILLARY liquid chromatography ,LIQUID chromatography ,PHOSPHATES ,BONE products - Abstract
Procedures for the stepwise addition of one or more deoxyribonucleotide residues to the 3′ end of an oligodeoxyribonucleoside phosphate acceptor using commercially available terminal deoxynucleotidyl transferase is described. 2–80 nmol of acceptors with a chain length of four, five or nine monomer units were elongated with a single 2′-deoxyribonucleoside 5′-triphosphate in yields of 20-30 %. The monomers carried no protecting groups and were used both radioavtively labelled and unlabelled. The elongated oligodeoxynucleoside phosphates were isolated by reverse-phase (Nucleosil C
18 ) high-performance liquid chromatography or paper chromatography. The isolated products were sequenced by the fingerprint method. Advantages and disadvantages of this new methodology for the enzymatic synthesis of defined oligodeoxynucleotides are discussed. [ABSTRACT FROM AUTHOR]- Published
- 1984
- Full Text
- View/download PDF
9. Amino-Acid Sequence of the L-1 Light Chain of Chicken Cardiac-Muscle Myosin.
- Author
-
Maita, Tetsuo, Umegane, Toshiyo, Kato, Yukio, and Matsuda, Genji
- Subjects
CHROMATOGRAPHIC analysis ,PEPTIDES ,PROTEINS ,AMINO acids ,GLOBULINS ,AMINO acid analysis ,PROTEIN analysis - Abstract
The light chain fraction was separated from myosin extracted from chicken cardiac muscle. Two light chain components, L-1 and L-2 in the fraction were isolated by chromatography on a column of DEAE-cellulose (DE-52) in the presence of 4 M urea. After performic acid oxidation, the L-1 chain was digested with trypsin and the resulting peptides were isolated. The amino acid sequences of the peptides were established. The ordering of these tryptic peptides in the L-1 chain was deduced from the amino acid compositions and the partial sequences of peptic peptides from S-carboxymethylated L-1 chain. Comparing the whole sequence of the L-1 chain thus established with that of alkali light chain of rabbit skeletal muscle myosin, 67 amino acid substitutions and two insertions were recognized. [ABSTRACT FROM AUTHOR]
- Published
- 1980
- Full Text
- View/download PDF
10. Pool-less processing to streamline downstream purification of monoclonal antibodies.
- Author
-
Zhang, Jennifer, Conley, Lynn, Pieracci, John, and Ghose, Sanchayita
- Subjects
MONOCLONAL antibodies ,CONTINUOUS processing ,CHROMATOGRAPHIC analysis ,HYDROPHOBIC interactions ,ANIONS ,CELL culture - Abstract
With cell culture titers and productivity increasing in the last few years, pressure has been placed on downstream purification to look at alternative strategies to meet the demand of biotech products with high dose requirements. Even when the upstream process is not continuous (perfusion based), adopting a more productive and/or continuous downstream process can be of significant advantage. Due to the recent trend in exploring continuous processing options for biomolecules, several enabling technologies have been assessed at Biogen. In this paper, we evaluate the capability of one of these technologies to streamline and improve our downstream mAb purification platform. Current conventional downstream polishing steps at Biogen are operated in flow-through mode to achieve higher loadings while maintaining good selectivity. As titers increase, this would result in larger columns and larger intermediate product pool holding tanks. A semicontinuous downstream process linking the second and third chromatography steps in tandem can reduce/eliminate intermediate holding tanks, reduce overall processing time, and combine unit operations to reduce validation burdens. A pool-less processing technology utilizing inline adjustment functionality was evaluated to address facility fit challenges for three high titer mAbs. Two different configurations of polishing steps were examined: (i) anion exchange and hydrophobic interaction and (ii) anion exchange and mixed mode chromatography. Initial laboratory scale proof of concept studies showed comparable performance between the batch purification process and the pool-less process configuration. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
11. Structure of fructopolysaccharide (asparagosin) from roots of asparagus (<em>Asparagus officinalis</em> L.).
- Author
-
Shiomi, Norio
- Subjects
SUCROSE ,FRUCTOSE ,GLYCOSIDES ,CHROMATOGRAPHIC analysis ,COLLOIDS ,LEAVENING agents - Abstract
Fructopolysaccharide (asparagosin, fructan) was prepared from an extract of asparagus roots by chromatography on carbon-Celite, paper and Toyopearl HW-40S (gel permeation). The asparagus fructopolysaccharide was a mixture of saccharides ranging from DP (degree of polymerization) 12 to 22 approximately. It yielded fructose and glucose by hydrolyzing with acid or yeast β-fructofuranosidase. The ratio of fructose to glucose in the enzyme hydrolysate was 13:1 by HPLC analysis. Structural determinations were made by
13 C-NMR spectroscopy. Strong signals corresponding to carbon-1 (C-1), C-2, C-3, C-4, C-6 and C-5 of fructose residues in the fructopolysaccharide were observed at &deta;61.08-61.77, 103.64-104.26, 77.42-78.08, 74.43-75.09, 62.71-63.00 and 81.74 respectively. These chemical shifts were similar to those of inulin. Moreover, weaker signals were also detected at &deta;92.85, 71.80, 73.13, 69.79 and 72.23 due to C-1, C-2, C-3, C-4 and C-5 of the glucose residue. The chemical shifts are almost identical to those of glucose carbons in raffinose, neokestose, 6G (1-β-D-fructofuranosyl)2 sucrose and 1F ,6G -di-β-D-fructofuranosyl sucrose. These findings were confirmed by analysis of methanolysate from permethylated fructopolysaccharide by using gas-liquid chromatography. The fructopolysaccharide from asparagus roots was composed of saccharides possessing approximately 11-21 fructose residues linked by β-2,1 bonds and a non-terminal glucose residue bound with fructose residues at positions C-1 and C-6. [ABSTRACT FROM AUTHOR]- Published
- 1993
- Full Text
- View/download PDF
12. STUDIES ON THE NATURALLY OCCURRING GIBBERELLINS IN AONLA <em>(EMBLICA OFFICINALIS</em> GAERTN.) FRUIT.
- Author
-
Ram, Sant and Rao, T. Raja
- Subjects
GIBBERELLINS ,PLANT hormones ,FRUIT ,SILICIC acid ,CHROMATOGRAPHIC analysis ,PLANTS - Abstract
The fruit of aonla (Emblica officinalis) remains at rest without growth for a period of 3½ months after setting and resumes growth thereafter. Studies on endogenous gibberellin activity of the fruit and exogenous applications of gibberellin to the fruit at rest suggest that the inability of the fruit to resume growth immediately after setting is not due to gibberellin deficiency. The fruit, when making rapid growth following its rest, contained six gibberellin-like factors active in the lettuce hypocotyl test. Five behaved like gibberellins A
1 , A3 , A4 , A7 and A9 in paper, thin-layer and silicic acid : celite column chromatography. [ABSTRACT FROM AUTHOR]- Published
- 1978
- Full Text
- View/download PDF
13. Aromatization of 4-oxocyclohexanecarboxylic acid to 4-hydroxybenzoic acid by two distinctive desaturases from Corynebacterium cyclohexanicum.
- Author
-
Kaneda, Toshi, Obata, Hitoshi, and Tokumoto, Masakazu
- Subjects
AMINO acids ,HYDROGEN peroxide ,ENZYMES ,GEL permeation chromatography ,CHROMATOGRAPHIC analysis ,BIOCHEMISTRY ,TRYPTOPHAN ,CYCLOHEXANE - Abstract
We have previously demonstrated that Corynebacterium cyclohexanicum degrades cyclohex-anecarboxylic acid, a bacteriocide, through a pathway including the aromatization of 4-oxocyclohex-anecarboxylic acid to 4-hydroxybenzoic acid [Kaneda, T. (1974) Biochem. Biophys. Res. Commun. 58, 140–144]. Aromatization has now been shown to be catalysed by two desaturase enzymes. Under the action of desaturase I, 4-oxocyclohexanecarboxylic acid is converted to (+)-4-oxocyclohex-2-enecarboxylic acid which is then aromatized by desaturase II to 4-hydroxybenzoic acid. The latter reaction is presumed to occur via the unstable intermediate, 4-oxocyclohex-2,5-dienecarboxylic acid, which is spontaneously isomerized to 4-hydroxybenzoic acid. Desaturase I has been purified in an electrophoretically homogeneous form. It is monomeric with a molecular mass of 67 kDa and contains one tryptophan, one histidine and two cysteine residues per enzyme molecule. The enzyme produces an equivalent amount of 4-oxocyclohex-2-enecarboxylic acid and hydrogen peroxide from 4-oxocyclohexanecarboxylic acid. The properties of desaturase I have been studied in detail. Desaturase II is unstable and has been partially purified. Its characterization is therefore limited. However, the molecular mass of desaturase II was estimated to be 43 kDa by gel filtration chromatography. The characterization of both desaturase enzymes is described in this paper. The possible environmental importance of microbial aromatization in the biodegradation of compounds with the cyclohexane structure is discussed. [ABSTRACT FROM AUTHOR]
- Published
- 1993
- Full Text
- View/download PDF
14. Control of human T-colony formation by interleukin-2.
- Author
-
Jourdan, M., Commes, T., and Klein, B.
- Subjects
T cells ,LYMPHOCYTES ,INTERLEUKIN-2 ,CHROMATOGRAPHIC analysis ,IMMUNOGLOBULINS ,MONOCLONAL antibodies - Abstract
T-colony formation can be induced in PHA-stimulated peripheral blood mononuclear cells (PBM) from man, but not in PHA-stimulated purified T cells, the latter requiring the presence of factors produced by PHA-stimulated PBM and termed T-colony promoting activity (TCPA). In this paper, we demonstrate that interleukin-2 (IL-2), the growth hormone of T lymphocytes, controls T-colony formation. We show that: (i) IL-2 activity and TCPA produced by PHA-activated PBM are co-purified by gel filtration and chromatography on blue agarose, a procedure which yields a 850-fold IL-2 purification; (ii) recombinant IL-2, produced by genetically manipulated Eseherichia coli, can induce T-colony formation in PHA-stimulated purified T cells; (iii) Monoclonal antibody against the IL-2 receptor (anti-Tac antibody) completely inhibits the T-colony formation in PHA-stimulated PBM when directly added to the culture system. [ABSTRACT FROM AUTHOR]
- Published
- 1985
15. Further characterization, by a combined high-performance liquid chromatography/ 1H-NMR approach, of the heterogeneity displayed by the neutral carbohydrate chains of human bronchial mucins.
- Author
-
Lamblin, Geneviève, Boersma, Arnold, Lhermitte, Michel, Roussel, Phillippe, Mutsaers, Johanna H. G. M., Van Halbeek, Herman, and Vliegenthart, Johannes F. G.
- Subjects
CYSTIC fibrosis ,OLIGOSACCHARIDES ,BLOOD transfusion ,LIQUID chromatography ,SPECTRUM analysis ,HYPOGLYCEMIA ,SACCHARIDES ,CHROMATOGRAPHIC analysis - Abstract
From bronchial mucins of cystic fibrosis patients with blood group O, the carbohydrate chains were released in the form of oligosaccharide-alditols by alkaline borohydride treatment. Application of high-performance liquid chromatography directly on the pool of neutral oligosaccharides afforded 23 fractions. Twenty oligosaccharide structures were characterized by employing 500-MHz
1 H-NMR spectroscopy in conjunction with sugar analysis. Thirteen among these had been revealed before to occur in human bronchial nucins [Van Halbeek, H., Dorland, L., Vliegenthart, J. F. G., Hull, W. E., Lamblin, G., Lhermitte, M., Boersma, A., and Roussel, P. (1982) Eur. J. Biochem. 127, 7–20], when paper-chromatographic fractionation of this pool of neutral oligosaccharides was employed. High-performance liquid chromatography enabled to obtain another seven pentassacharide and hexasaccharide alditols; the largest-size representatives are: [This symbol cannot be presented in ASCII format] Thereby, this approach afforded deeper insight into the structural heterogeneity displayed by the carbohydrate chains of bronchial mucins. [ABSTRACT FROM AUTHOR]- Published
- 1984
- Full Text
- View/download PDF
16. Synthesis and Hydrolysis of l,3-β-Xylosidic Linkages by Endo-l,4-β-xylanase of <em>Cryptococcus albiilus</em>.
- Author
-
Biely, Peter and Vršanská, Màaria
- Subjects
HYDROLYSIS ,CRYPTOCOCCUS ,YEAST ,XYLANASES ,CHROMATOGRAPHIC analysis ,ENZYMES - Abstract
Purified extracellular endo-1,4-β-xylanase (EC 3.2.1.8) of the yeast Cryptococcus albidus was found to catalyze not only the known l,4-β-transfer, but an alternative transglycosylation reaction leading to the formation of 1,3-β-glycosidic linkages. From a mixture of products of β-xylanase degradation of phenyl β-D-xylopyranoside three xylooligosaccharide fractions, differring chromatographically from the 1,4-β-linked products, were isolated by preparative paper chromatography. Their structure was elucidated by mass spectrometry,
13 C-NMR spectroscopy and enzymic hydrolysis by β-xylanase and β-xylosidase. The isomeric xylotriose was identified as 3-O-β-D-xylopyranosyl-4-O-β-D-xylopyranosyl-D-xylose. The fraction of isomeric tetrasaccharides was found to be represented mainly by 4-O-β-D-xylopyranosyl-3-O-β-D-xylopyranosyl-4-O-β-D-xylopyranosyl-D-xylose. The xylooligosaccharides containing one 1,3-β-linkage were also produced on the enzyme treatment of 1,4-β-xylotriose and 1,4-β-xylan. When treated with the enzyme responsible for their synthesis, the isomeric xylooligosaccharides were hydrolyzed at the 1,3-β-linkage, despite the fact the enzyme does not attack 1,3-β-xylan. The results are interpreted in the relation to the characterized four-subsite substrate-binding site of the enzyme. [ABSTRACT FROM AUTHOR]- Published
- 1983
- Full Text
- View/download PDF
17. Somatic Antigens of <em>Shigella</em>.
- Author
-
Dmitriev, Boris A., Knirel, Yurily A., Sheremet, Olga K., Shashkov, Alexander A., Nikolay K. Kochetkov, and Hofman, Irihna L.
- Subjects
ANTIGENS ,SHIGELLA ,POLYSACCHARIDES ,ENDOTOXINS ,ENTEROBACTERIACEAE ,CHROMATOGRAPHIC analysis - Abstract
The specific polysaccharide was obtained from the lipopolysaccharide of Shigella newcastle by mild acid hydrolysis and further purified by permeation chromatography on Sephadex G-50. It was found to consist of L-rhamnose, 2-acetamido-2-deoxy-D-galactose, D-galacturonic acid residues and O-acetyl groups in the molar ratios of 2: 1: 1: 1. On the basis of
1 H and13 C nuclear magnetic resonance spectroscopy, methylation analysis, partial acid hydrolysis, Smith degradation, and chromium trioxide oxidation, the following structure can be assigned to the repeating oligosaccharide unit of the polysaccharide :-4)DgalA(βI-3)Dga1NAc-(βl-2)LAc3 Rha(αl-2)LRha(αl-, where GalA = galacturonic acid, GalNAc = N-acetylgalactosamine, Ac3 Rha = 3-O-acetylrhamnose. The structural and immunochemical data presented prove that Sh newcastle lipopolysaccharide belongs to a ‘non-classical’ type of somatic antigens with acidic O-specific polysaccharide chains. [ABSTRACT FROM AUTHOR]- Published
- 1979
- Full Text
- View/download PDF
18. Purification and Characterization of the Lytic Enzyme <em>N</em>-Acetylmuramyl-L-alanine Amidase of Bacteriophage T7.
- Author
-
Kleppe, Gunnar, Jensen, B., and Pryme, Ian F.
- Subjects
CHROMATOGRAPHIC analysis ,POLYSACCHARIDES ,ANTIBACTERIAL agents ,ESCHERICHIA coli ,ENZYMES ,B cells ,COLLOIDS - Abstract
The lytic enzyme from bacteriophage T7 has been purified from T7-infected Escherichia coli B cells and characterized. In the purification procedure advantage was taken of the reversible binding of the enzyme to chitin. Molecular weight determinations of the enzyme by Sephadex G-75 chromatography and sodium dodecyl sulphate gel electrophoresis gave estimates of 21000 and 18000 respectively. Because the activity of the enzyme falls rapidly to 1-3% of that observed immediately after lysis of the cells, various means to stabilize the enzyme have been tried. Of the methods attempted only binding to the substrate analogue chitin was successful. The enzymic activity was found to be markedly dependent on ionic strength and pH, maximum activity was observed using 5 mM phosphate buffer pH 7.5. MgCl
2 was found to enhance the lytic activity 2–3-fold, the optimal concentration being about 0.5 mM. The enzyme was not sensitive to penicillin G or spermine, but was specifically inhibited by p-chloromercuribenzoate. Following digestion of E. coli peptidoglycan the cell wall peptides L-Ala-D-Glu(A2 pm), L-Ala-D-Glu(A2 pm-D-Ala) and the dimer of the latter were formed, together with paper chromatographically immobile glycan strands. The enzyme, therefore, acts as an N-acetylmuramyl-L-alanine amidase by cleaving the bond between N-acetylmuramic acid and L-alanine in the E. coli peptidoglycan. The enzyme has apparently no effect on the peptidoglycan from Micrococcus luteus, and seems to have a preference for high-molecular-weight substrates. Thus the disaccharide-tetrapeptide GlcNAc-MurNAc-L-Ala-D-Glu(A2 pm-D-Ala) and its dimer are not substrates for the enzyme. [ABSTRACT FROM AUTHOR]- Published
- 1977
- Full Text
- View/download PDF
19. Cell-Wall Lipopolysaccharide of the <em>'Shigella</em>-Like' <em>Escherichia coli</em> 0124.
- Author
-
Dmitriev, Boris A., Lvov, Vjacheslav L., Kochetkov, Nikolay K., Jann, Barbara, and Jann, Klaus
- Subjects
GAS chromatography ,ESCHERICHIA coli ,ELECTROPHORESIS ,CHROMATOGRAPHIC analysis ,SPECTRUM analysis ,ELECTROCHEMISTRY ,MAGNETIC fields - Abstract
From Escherichia coli 0124 two lipopolysaccharide preparations were obtained with phenol/water extraction and cetavlon precipitation. Polyacrylamide gel electrophoresis in the presence of sodium dodecylsulfate and chemical analysis showed that the two preparations differed only in the extent of the O-specific polysaccharide moiety. In passive haemagglutination and gel precipitation the two lipopolysaccharide preparations from E. coli 0124 and the corresponding preparations from Shigella dysenteriae type 3 reacted alike. The O-specific polysaccharide moiety was characterized with proton magnetic resonance spectroscopy, optical rotation and paper electrophoresis. The constituents were determined by gas chromatography and ion-exchange chromatography. The polysaccharide contained glucose (Glc), gatactose (Gal), galactosamine (GalN) and 4-O-(1′-carboxyethyl)-D-glucopyranose (glucolactilic acid, GIcLA) in the molar ratios of 1 : 2 : 1 : 1. Glucolactilic acid, which has a structure similar to muramic acid, was first found in Sh. dysenteriae. The polysaccharide from E. coli 0124 and oligosaccharides obtained from it by partial acid hydrolysis were subjected to methylation analysis using the method of combined gas chromatography—mass spectrometry. The results indicated that the pentasaccharide repeating unit of the polysaccharide is[This symbol cannot be presented in ASCII format] In the polysaccharide the repeating units are joined through galactofuranosidic linkages. This structure is identical with that of the somatic polysaccharide of Sh. dysenterae type 3. [ABSTRACT FROM AUTHOR]
- Published
- 1976
- Full Text
- View/download PDF
20. <em>Hemachatus haemachatus</em> (Ringhals) Venom. Purification, Some Properties^and Amino-Acid Sequence of Phospholipase A (Fraction DE-I).
- Author
-
Joubert, François J.
- Subjects
PHOSPHOLIPASES ,SEPHADEX ,CHROMATOGRAPHIC analysis ,CHYMOTRYPSIN ,HOMOLOGY (Biology) ,AMINO acids - Abstract
Two isoenzymes of phospholipase A (fraction DE-I and DE-JI) were isolated from the venom of Hemachatus haemachatus (Riughals) by gel filtration on Sephadex 0-50 and by ion-exchange chromatography on DEAE-cellulose. Fraction DE-I was homogeneous by various physicochemical criteria. The enzyme comprises 119 amino acid residues and is cross-linked by seven disulphide bridges. The values of the molecular weight of fraction DE-I from gel filtration in the presence of calcium ions, also by the dodecylsulphate gel method and calculated from the amino acid composition were close to 13500. The complete amino acid sequence of phospholipase A (fraction DE-I) was elucidated. The reduced and S-carboxymethylated enzyme was digested with trypsin, chymotrypsin, thermolysin and subtilisin and the peptides purified by DEAE-cellulose chromatography, gel filtration and chromatography or electrophoresis on paper. The amino acid sequences of the intact enzyme and the pure peptides were determined by the Edman procedure, either through the use of the automatic sequencer or by manual manipulation. The chymotryptic digest provided the necessary overlapping peptides for aligning the tryptic peptides. The amino acid sequence of Hemachatus haemachatus phos- pholipase A (fraction DE-I) shows a high degree of homology with the three isoenzymes of phospho- lipase A from Naja melanoleuca and is also homologous with the phospholipase A from Bitis gabonica and porcine pancreas. [ABSTRACT FROM AUTHOR]
- Published
- 1975
- Full Text
- View/download PDF
21. Disulfide Bonds of Toxin II of the Scorpion <em>Androctonus australis</em> Hector.
- Author
-
Kopeyan, Charles, Martinez, Gérard, Lissitzky, Serge, Miranda, François, and Rochat, Hervé
- Subjects
SULFIDES ,CHEMICAL bonds ,SCORPION venom ,NEUROTOXIC agents ,PROTEOLYTIC enzymes ,PEPTIDES ,CHROMATOGRAPHIC analysis ,ELECTROPHORESIS - Abstract
The positions of the disulfide bridges in toxin Il of Androctonus australis Hector were investigated using proteolytic enzymes. The resulting peptides were separated by column and paper chromatography and high-voltage electrophoresis. Determination of the amino acid compositions of the cystinecontaining peptides or their oxidized derivatives and, when necessary, dansyl Edman degradation allowed to locate the disulfide bonds in the toxin. The four disulfide bridges were found to link the half-cystine residues number 12 and 63, 16 and 36, 22 and 46, 26 and 48. These positions are probably the same in all scorpion neurotoxins. [ABSTRACT FROM AUTHOR]
- Published
- 1974
- Full Text
- View/download PDF
22. Scalable purification of extracellular vesicles with high yield and purity using multimodal flowthrough chromatography.
- Author
-
Bonner, Scott E., van de Wakker, Simonides I., Phillips, William, Willms, Eduard, Sluijter, Joost P. G., Hill, Andrew F., Wood, Matthew J. A., and Vader, Pieter
- Subjects
EXTRACELLULAR vesicles ,GEL permeation chromatography ,CHROMATOGRAPHIC analysis ,APOLIPOPROTEIN B ,NUCLEIC acids - Abstract
Extracellular vesicles (EVs) are cell derived membranous nanoparticles. EVs are important mediators of cell–cell communication via the transfer of bioactive content and as such they are being investigated for disease diagnostics as biomarkers and for potential therapeutic cargo delivery to recipient cells. However, existing methods for isolating EVs from biological samples suffer from challenges related to co‐isolation of unwanted materials such as proteins, nucleic acids, and lipoproteins. In the pursuit of improved EV isolation techniques, we introduce multimodal flowthrough chromatography (MFC) as a scalable alternative to size exclusion chromatography (SEC). The use of MFC offers significant advantages for purifying EVs, resulting in enhanced yields and increased purity with respect to protein and nucleic acid co‐isolates from conditioned 3D cell culture media. Compared to SEC, significantly higher EV yields with similar purity and preserved functionality were also obtained with MFC in 2D cell cultures. Additionally, MFC yielded EVs from serum with comparable purity to SEC and similar apolipoprotein B content. Overall, MFC presents an advancement in EV purification yielding EVs with high recovery, purity, and functionality, and offers an accessible improvement to researchers currently employing SEC. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
23. Purification, characterization and immunolocalization of porcine surfactant protein D.
- Author
-
Soerensen, C. M., Nielsen, O. L., Willis, A., Heegaard, P. M. H., and Holmskov, U.
- Subjects
CELLS ,CONNECTIVE tissues ,IMMUNOGLOBULINS ,CHROMATOGRAPHIC analysis ,GLANDS ,ELECTROPHORESIS - Abstract
Surfactant protein D (SP-D) is a collectin believed to play an important role in innate immunity. SP-D is characterized by having a collagen-like domain and a carbohydrate recognition domain (CRD), which has a specific Ca
2+ -dependent specificity for saccharides and thus the ability to bind complex glycoconjugates on micro-organisms. This paper describes the tissue immunolocalization of porcine SP-D (pSP-D) in normal slaughter pigs using a monoclonal antibody raised against purified pSP-D. Porcine SP-D was purified from porcine bronchoalveolar lavage (BAL) by maltose-agarose and immunoglobulin M affinity chromatography. The purified protein appeared on sodium dodecyl sulphate–polyacrylamide gel electrophoresis as a band of∼53 000 MW in the reduced state and∼138 000 MW in the unreduced state. Porcine SP-D was sensitive to collagenase digestion and N-deglycosylation, which reduced the molecular mass to∼24 000 MW and∼48 000 MW respectively, in the reduced state. N-deglycosylation of the collagen-resistant fragment, reduced the molecular mass to∼21 000 MW showing the presence of an N-glycosylation site located in the CRD. Porcine SP-D bound to solid-phase mannan in a dose and Ca2+ -dependent manner with a saccharide specificity similar to rat and human SP-D. The purified protein was used for the production of a monoclonal anti-pSP-D antibody. The antibody reacted specifically with pSP-D in the reduced and unreduced state when analysed by Western blotting. Immunohistochemical evaluation of normal porcine tissues showed pSP-D immunoreactivity predominantly in Clara cells and serous cells of the bronchial submucosal glands, and to a lesser extent in alveolar type II cells, epithelial cells of the intestinal glands (crypts of Lieberkühn) in the duodenum, jejunum and ileum and serous cells of the dorsolateral lacrimal gland. [ABSTRACT FROM AUTHOR]- Published
- 2005
- Full Text
- View/download PDF
24. Cell division inhibitors SulA and MinC/MinD block septum formation at different steps in the assembly of the Escherichia coli division machinery.
- Author
-
Justice, Sheryl S., García-Lara, Jorge, and Rothfield, Lawrence I.
- Subjects
CELL division ,ESCHERICHIA coli ,CHROMATOGRAPHIC analysis ,MOLECULES - Abstract
SulA and MinCD are specific inhibitors of cell division in Escherichia coli . In this paper, size exclusion chromatography was used to study the effect of the SulA and MinCD division inhibitors on the oligomerization state of endogenous FtsZ in cytoplasmic extracts, and immunofluorescence microscopy was used to determine the effect of SulA and MinCD on the formation of FtsZ, FtsA and ZipA rings at potential division sites. SulA prevented the formation of high-molecular-weight FtsZ polymers by interfering with FtsZ dimerization and subsequent oligomerization. In contrast, the MinCD division inhibitor did not prevent the oligomerization of FtsZ in the cell extracts or the formation of FtsZ and ZipA ring structures in vivo . However, MinCD did prevent the formation of FtsA rings. Increased expression of ftsA suppressed MinCD-induced division inhibition, but had no effect on SulA-induced division inhibition. These results indicate that MinCD blocks the assembly of the septation machinery at a later step than SulA, at the stage at which FtsA is added to the FtsZ ring. [ABSTRACT FROM AUTHOR]
- Published
- 2000
- Full Text
- View/download PDF
25. Evaluation of restricted access media for the purification of cell culture‐derived Orf viruses.
- Author
-
Lothert, Keven, Harsy, Yasmina M. J., Endres, Patrick, Müller, Egbert, and Wolff, Michael W.
- Subjects
PRODUCT recovery ,COMPOSITION of feeds ,CELL culture ,GENETIC vectors ,CHROMATOGRAPHIC analysis ,MULTIMODAL user interfaces - Abstract
Recently, multimodal chromatography using restricted access media (RAM) for the purification of nanoparticles, such as viruses has regained increasing attention. These chromatography resins combine size exclusion on the particle shell and adsorptive interaction within the core. Accordingly, smaller process‐related impurities, for example, DNA and proteins, can be retained, while larger product viruses can pass unhindered. We evaluated a range of currently available RAM, differing in the shells' pore cut‐off and the core chemistry, for the purification of a cell culture‐derived clarified model virus, namely the Orf virus (ORFV). We examined impurity depletion and product recovery as relevant criteria for the evaluation of column performance, as well as scale‐up robustness and regeneration potential for evaluating a multiple use application. The results indicate that some columns, for example, the Capto Core, enable both a high DNA and protein removal, while others, for example, the Monomix Core 60 (MC60), are more suitable for DNA depletion. Furthermore, column regeneration is facilitated by using columns with larger shell pores (5000 vs. 700 kDa) and weaker binding interactions (anion exchange vs. multimodal). According to these findings, the choice of RAM resins should be selected according to the respective feed sample composition and the planned number of application cycles. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
26. AMINO ACID AND AMIDE METABOLISM IN THE HULLS AND SEEDS OF DEVELOPING FRUITS OF GARDEN PEA, PISUM SATIVUM L. IV. ALANINE.
- Author
-
Murray, D. R.
- Subjects
PEAS ,PLANT metabolism ,SEEDS ,PLANT embryology ,PLANT metabolites ,CHROMATOGRAPHIC analysis ,AUTORADIOGRAPHY ,GLUTAMINE ,PLANT product synthesis - Abstract
Pea plants (Pisum sativum L. cv. Melbourne Market), each with a single developing pod, were pulse-fed [[sup14]C]alanine supplied through the cut stem. The stages of pod development chosen were from 14 to 21 d after full blossom when alanine is one of the principal nitrogenous solutes secreted by the seedcoats into the embryo sac. In addition, [[sup14]C]alanine was supplied to a detached 14 d old pod via the base of the cut peduncle. After 24 h, the peduncles, hulls, seed Components, and where appropriate, parts of the subtending leaf, were separated and frozen for later analysis. The distribution of label in soluble metabolites was determined by paper chromatography and radioautography. Of the total label in metabolites secreted into the embryo sac, only about 4% remained associated with alanine (14 d stage); when [[sup14]C]alanine was fed via the stem, most of this label was in sucrose (60%) and glutamine (27%), but when [[sup14]C]alanine was fed via the peduncle, most of the label entering the embryo sac was in glutamine. The results confirm that most of the alanine secreted into the embryo sac is synthesized in the seedcoats de novo from other solutes, notably asparagine. [ABSTRACT FROM AUTHOR]
- Published
- 1986
- Full Text
- View/download PDF
27. HORMONES IN PLANTS BEARING NITROGEN-FIXING ROOT NODULES: THE DISTRIBUTION OF CYTOKININS IN VICIA FABA L.
- Author
-
Henson, I. E. and Wheeler, C. T.
- Subjects
CYTOKINES ,PLANT hormones ,PLANT roots ,CHROMATOGRAPHIC analysis ,IMMUNOREGULATION ,FORAGE plants - Abstract
Cytokinin activity in extracts of nodules, roots, stems and leaves of Vicia faba L. was estimated using the soybean callus bioassay. High levels of cytokinins were present in nodules and leaves while the amounts detected in roots and stems were much lower. Cytokinin levels in the root nodules were as much as twelve to thirteen times those detected in the roots. At least three kinds of cytokinins were present in the plant, two of which had similar chromatographic properties to the cytokinin zeatin and its riboside. The third cytokinin had properties which distinguished it from any of the known cytokinins. This peak was predominant in the leaves while the zeatin riboside-like peak was the main cytokinin detected in the root nodules and roots. [ABSTRACT FROM AUTHOR]
- Published
- 1976
- Full Text
- View/download PDF
28. Duodenase, a new serine protease of unusual specificity from bovine duodenal mucosa.
- Author
-
Zamolodchikova, Tatyana S., Vorotyntseva, Tatyana I., and Antonov, Vladymir K.
- Subjects
ENDOPEPTIDASES ,PEPTIDASE ,SIGNAL peptidases ,DUODENUM ,SMALL intestine ,CHROMATOGRAPHIC analysis - Abstract
In this paper, data are presented on purification and properties of a new serine endopeptidase (duodenase) isolated from bovine duodenum mucosa. The enzyme has been purified to homogeneity by combinations of ammonium sulphate fractionation,carboxymethyl-cellulose 52 chromatography, and affinity chromatography on Sepharose 4B with Kunitz soybean trypsin inhibitor as a ligand. Some physicochemical properties of this protease have been investigated. The molecular mass of the purified duodenase was determined to be 29±0.5 kDa by SDS/PAGE and G-2000 SW column chromatography. The enzyme molecule is a single chain and the native enzyme is a monomeric protein. Its isoelectric point was estimated to be 10 ± 0.2. Duodenase has two forms (I and II) which possess similar properties but differ in their amino acid composition. The new protease is a glycoprotein and contains approximately 3.5% sugars. The enzyme displays trypsin-like and chymotrypsin-like activities and hydrolyzes the amide bonds of substrates having Lys, Arg, Tyr, Phe and Leu residues at the P
1 position. Duodenase is most active at pH 7.9–8.2. Duodenase was irreversibly inhibited by diisopropylphosphofluoridate and phenylmethanesulphonyl fluoride, indicative of an activ-site serine in this protease, α-N-Tosyl-L-lysine chloromethane and α-N-tosyl-L-phenylalanine chloromethane, which react with an active His, caused marked inhibition of trypsin-like and chymotrypsin-like activities of duodenase. The enzyme activity was strongly supressed by trypsin inhibitors from different sources (soybeans, bovine lungs and Lima beans). Chicken egg white ovomucoid had no effect on the duodenase activity. The N-terminal sequence of the native duodenase (24 amino acid residues) shows high similarity with those of human and murine cytotoxic T-lymphocyte granzymes, human leukocyte cathepsin G and rat mast cell chymases. The biological role of duodenase is discussed. [ABSTRACT FROM AUTHOR]- Published
- 1995
- Full Text
- View/download PDF
29. Purification and characterization of a liver microsomal cytochrome <em>P</em>-450 isoenzyme with a high affinity and metabolic capacity for coumarin from pyrazole-treated D2 mice.
- Author
-
Juvonen, Risto O., Shkumatov, Vladimir M., and Lang, Matti A.
- Subjects
ANTICOAGULANTS ,RODENTS ,PYRAZOLES ,PROTEINS ,CHROMATOGRAPHIC analysis ,BENZOSELENADIAZOLE - Abstract
Microsomal coumarin 7-hydroxylase activity is regulated differently from several other monooxygenase enzymes, at least in mice [Wood, A. W. and Conney, A. H. (1974) Science (Wash. DC) 612-614]. Recently we found that in D2 mice this activity is strongly and selectively induced by pyrazole [Juvonen, R. O., Kaipainen, P. K. and Lang, M. A. (1985) Eta. J. Bloc/tern. 152, 3-8]. This paper describes the purification of the pyrazole- inducible cytochrome P450 isoenzyme. Because of the lability of the protein, a special procedure for the purification was developed. The procedure is based on a combination of hydrophobic and ion-exchange chromatography and the presence of 100 μM coumarin in the preparations throughout the whole purification. Coumarin effectively protected the P-450 from degradation and also converted the pyrazole-inducible P-450 to its high-spin state. This enabled us to choose only those fractions for further purification where the P-450(s) was in its high-spin state (rather than measuring the content of the total P-450). As a result the purified protein had an apparent molecular mass of 49.7 kDa, a specific content of 19.9 nmol/mg protein and a very high affinity and metabolic capacity for coumarin. [ABSTRACT FROM AUTHOR]
- Published
- 1988
- Full Text
- View/download PDF
30. Partial purification of the maturation-promoting factor MPF from unfertilized eggs of <em>Xenopus laevis</em>.
- Author
-
Nguyen-Gia, Pascal, Bomsel, Morgane, Labrousse, Jean Pierre, Gallien, Claude Louis, and Weintraub, Hadassa
- Subjects
EGGS ,PHOSPHORYLATION ,HYDROXYAPATITE ,PEPTIDES ,XENOPUS laevis ,CHROMATOGRAPHIC analysis ,MILK proteins - Abstract
A 200-fold purification of the maturation-promoting factor or MPF from unfertilized eggs of Xenopus laevis is reported for the first time. Purification was achieved by three successive column chromatographies on hydroxyapatite, trisacryl blue and L-arginine-agarose. The presence of MPF was assessed by the usual maturation criteria after injections of test material into immature stage VI unstimulated X. laevis oocytes: the precocious appearance of the maturation spot (within 45–120 min), the germinal vesicle breakdown, the presence of the first polar body and the second metaphase spindle. Purification was monitored by the decrease of the minimal amount of protein injected in a constant volume (50 nl) required to induce 50% frequency of germinal vesicle breakdown. This amount decreased from 500 ng in the crude extract to 2.5 ng in the 200-fold purified material. Analysis by SDS-PAGE of the etude extract showed about 40 Coomassie-blue-stained polypeptides with molecular masses ranging from 300 kDa to 20 kDa, whereas in the 200-fold purified MPF only 5 stained polypeptides were revealed, with molecular masses of 62, 53, 49, 39 and 37 kDa. In vitro phosphorylations for the detection of kinase activities for endogenous and exogenous substrates were monitored by analysis of autoradiograms of SDS-PAGE, after treatment of fractions with [γ-
32 P]ATP. Only inactive fractions eluted from columns ahead of MPF, and fractions containing MPF activity were tested. Phosphorylation of numerous stained polypeptides was demonstrated in the crude MPF extract and exogenous substrates such as phosvitin, casein and histone type II-AS were also strongly phosphorylated. In the MPF fraction, purified on hydroxyapatite, a polypeptide of 53 kDa was more highly and specifically phosphorylated and the presence of kinase activities was observed for the above three exogenous substrates. In the 100-fold and 200-fold purified MPF, phosphorylation of endogenous substrates could not be shown and kinase activities for the above three substrates were drastically decreased as compared with the crude and purified MPF obtained after hydroxyapatite column chromatography. However, neither endogenous phosphorylations nor kinase activities with the above exogenous substrates could be shown in inactive fractions eluted ahead of MPF at the different purification steps. Some characteristics of the purified material are also described in this paper. [ABSTRACT FROM AUTHOR]- Published
- 1986
- Full Text
- View/download PDF
31. Serological and chromatographic analyses of antigenic structures detected in human brain, thymus and lymph nodes.
- Author
-
Arndt, R., Stark, Rosemarie, Klein, P., and Thiele, H.-G.
- Subjects
THYMUS ,LYMPHOID tissue ,ENDOCRINE glands ,LYMPHOCYTES ,ANTIGENS ,BONE marrow ,CHROMATOGRAPHIC analysis ,IMMUNE system - Abstract
In the present paper it is shown that the non-species specific determinant of the antigenic thymus-brain system previously detected in murine and human brain also exists in human thymus. However, in contrast to the situation in mice and rats this antigenic structure is not expressed on suspended thymic lymphocytes, but is associated with thymic tissue largely depleted of thymic lymphocytes. Moreover, this determinant is also detectable in human lymph nodes. Besides the non-species-specific antigenic determinant human thymus and brain also share a species-specific determinant. In contrast to the non species specific determinant this structure is also displayed by suspended thymic lymphocytes, certain peripheral blood lymphocytes and bone marrow cells. The non-species-specific determinant detected in human thymus is borne by a structure, which physico-chemically resembles the thymus-brain antigen isolated from murine brain and thymus as well as from human brain. Although the structure bearing the species specific antigenic determinant has a similar apparent molecular weight both antigens could be separated by ion exchange chromatography indicating their molecular diversity. [ABSTRACT FROM AUTHOR]
- Published
- 1978
32. Isolation of active and inactive forms of isocitrate dehydrogenase from <em>Escherichia coli</em> ML308.
- Author
-
Borthwick, Andrew C., Holms, W. Henry, and Nimmo, Hugh G.
- Subjects
DEHYDROGENASES ,ESCHERICHIA coli ,ELECTROPHORESIS ,GEL electrophoresis ,ELECTROCHEMISTRY ,CHROMATOGRAPHIC analysis - Abstract
1. In Escherichia coli ML308 isocitrate dehydrogenase is partially inactivated during growth on acetate [Bennett, P. M. and Holms, W. H. (1975) J. Gen. Micribiol. 87, 37-51]. 2. The active form of isocitrate dehydrogenase was purified to homogeneity from cells grown on glycerol. The key step in the procedure was chromatography on procion-red-Sepharose, from which the enzyme was specifically eluted with NADP
+ . 3. Two forms of isocitrate dehydrogenase were purified to homogeneity from cells grown on acetate. One form did not bind to procion-red-Sepharose and was essentially inactive; this form could be resolved from the active form by non-denaturing gel electrophoresis. The other form was specifically eluted from procion-red-Sepharose and was partially active; analysis of this form by non-denaturing gel electrophoresis suggested that it was a mixture of the active and inactive forms. 4. The three forms comigrated on denaturing gel electrophoresis and were identical by the criterion of onedimensional peptide mapping. 5. Analysis of the active and inactive forms by sedimentation equilibrium centrifugation and non-denaturing gel electrophoresis showed that they differed in charge but not in size. Amino acid analysis and two-dimensional peptide mapping showed that both forms were directs of identical subunits. 6. The active form of the enzyme contained no detectable alkali-labile phosphate, the inactive form contained 0.8 molecule subunit and the partially active form contained an intermediate amount. 7. The data suggest that the active and inactive forms of isocitrate dehydrogenase differ only in the presence of one phosphate group per subunit in the latter form; this is consistent with our results from phosphorylation of isocitrate dehydrogenase in vitro (Following paper in this journal). 8. The nature of the partially active form of isocitrate dehydrogenase and the significance of the results are discussed. [ABSTRACT FROM AUTHOR]- Published
- 1984
- Full Text
- View/download PDF
33. Studies of Amino-Acid Sequence in Dihydrofolate Reductase from a Human Methotrexate-Resistant Cell Line KB/6b.
- Author
-
Pan, Yu-Ching E., Domin, Barbara A., Li, Steven S.-L., and Yung-Chi Cheng
- Subjects
HOMOLOGY (Biology) ,AMINO acids ,CHROMATOGRAPHIC analysis ,PHASE partition ,HYDROGEN-ion concentration ,PROTEIN analysis - Abstract
The partial ammo acid sequence of dihydrofolate reductase (DHFR. EC 1.5,1.3) from human KB/6b cells hi been determined by using 3.5 mg of protein. Peptides covering the entire polypeptide chain were recovered from preparative peptide maps generated by the combination of paper chromatography and electrophoresis at pH 4.4 Peptide maps from mouse L1210 DHFR were also generated for comparison. Amino acid sequence of 75% of the 186 amino acid residues in the polypeptide chain of human KB/6b DHFR was obtained from Edman degradation and the remaining sequence was deduced from the amino acid compositions, from electrophoretic mobilities of related peptides and from the sequence homologies with other known mammalian DHFR sequence. A comparison of the proposed human DHFR sequence with the previously known sequent of mouse enzyme [Stone, et al. (1979) J. Biol. Chem. 245, 480-488] indicates that 18 differences are located in the established sequence of 139 residues and that 5 additional differences are in the tentative sequence of the remaining 47 amino acids. Kinetic properties of human KB/6b and mouse L1210 DHFR, which were determined in parallel experiments, are also compared. The possible structural-functional relationships between human and mouse DHFR are discussed. [ABSTRACT FROM AUTHOR]
- Published
- 1983
- Full Text
- View/download PDF
34. Structure of Teichoic-Acid--Clycopeptide Complexes from Cell Walls of Bacillus cereus AHU 1030.
- Author
-
Sasaki, Yasuo, Araki, Yoshlo, and Ito, Eiji
- Subjects
GLYCOPEPTIDES ,CHROMATOGRAPHIC analysis ,PEPTIDES ,POLYMERS ,DISACCHARIDES ,PEPTIDOGLYCANS - Abstract
From lysozyrne digests of N-acetylated cell walls of Bacillus cereus AHU 1030, two acidic polymer fractions with molecular weights of about 24000 and 45000 were isolated by ion-exchange chromatography and gel chromatography. These polymer fractions, containing glycerol, phosphorus and glucose in a molar ratio of 1.00: 1.00 : 0.85 together with small amounts of glycopeptide components and mannosamine were characterized as teichoic-acid - glycopeptide complexes with one and two teichoic acid chains made of 60-65 repeating glycerol phosphate units that were mostly glucosylated. Mild alkali treatment of the complexes yielded a disaccharide-Linked glycopeptide. The disaccharide was liberated from the glycopeptide by mild acid treatment and identifled as N-acety1rnarniosaminyl(β 1 →4)N-acetylglucosamine. On the other hand, the same disaccharide linked to the teichoic acid chain was obtained by direct heating of the cell walls at pH 2.5. These results lead to a conclusion that in the cell walls of this strain the glycerol teichoic acid chain is attached to the glycan chain of peptidoglycan through this disaccharide unit. The disaccharide is linked at its reducing and nonreducing ends to the glycan chain and the teichoic acid chain, respectively, through phosphodiester bridges. [ABSTRACT FROM AUTHOR]
- Published
- 1983
- Full Text
- View/download PDF
35. Two Homologous Cytochromes <em>b</em>5 in a Single Cell.
- Author
-
Lederer, Florence, Ghrir, Rachid, Guiard, Bernard, Cortial, Sylvie, and Ito, Akio
- Subjects
CYTOCHROMES ,AMINO acids ,HEMOPROTEINS ,TRYPSIN ,DIGESTIVE enzymes ,CHROMATOGRAPHIC analysis - Abstract
The amino acid sequence of the heme-binding domains of rat liver cytochromes b
5 from outer mitochondrial membranes and from microsomes has been determined by a combination of automatic and manual degradation of fragments generated by trypsin digestion and by cleavage at tryptophan. Tryptic peptides were separated by high-pressure liquid chromatography. The sequence of microsomal cytochrome b5 is identical with the one published by Owls and Heinemann after completion of this study [Biochim. Biophys. Acta (1982) 704. 163- 173]. The sequence of outer membrane cytochrome b5 differs from the microsomal one at 38 positions out of 91. There are 40 positions invariant between this sequence and the eight micrasornal sequences published thus far. The non-conservative substitutions are located at the surface of the known three-dimensional structure of calf microsomal cytochrome b5 except for the substitution of histidine- 15 by arginine. This paper brings the final proof that two iso-cytochromes b5 - exist in the same cell. Their high degree of similarity as well as their differential cellular localization raise some questions which are briefly discussed. [ABSTRACT FROM AUTHOR]- Published
- 1983
- Full Text
- View/download PDF
36. The Use of Affinity Chromatography on 2'5' ADP-Sepharose Reveals a Requirement for NADPH, Thioredoxin and Thioredoxin Reductase for the Maintenance of High Protein Synthesis Activity in Rabbit Reticulocyte Lysates.
- Author
-
Hunt, Tim, Herbert, Pamela, Campbell, Elizabeth A., Delidakis, Christos, and Jackson, Richard J.
- Subjects
PROTEINS ,THIOLS ,DEHYDROGENASES ,CHROMATOGRAPHIC analysis ,GEL permeation chromatography ,GLUCOSE - Abstract
Rabbit reticulocyte lysates were passed through 2'5'ADP-Sepharose columns under conditions in which the gel- filtration effect was negligible and low-molecular-weight compounds were retained in the flow-through lysate. Glucose-6-phosphate dehydrogenase. 6-phosphogluconate dehydrogenase and glutathione reductase were quantitatively adsorbed by the column and removed from the lysate.. but isocitrate dehydrogenase and thioredoxin reductase were retained in the flow-through lysate. The initial rate of protein synthesis in lysates treated in this way was normal, but synthesis stopped after about 20 mm of incubation. This shut-off could be prevented by the addition of dithiothreitol or by providing a means of NADPH generation, which could be achieved either by adding isocitrate or glucose-6-phosphate dehydrogenase. Further experiments used lysates which were first gel-filtered to remove low- molecular-weight metabolites and then passed through 2'5'ADP-Sepharose columns. Under these conditions thioredoxin reductase was efficiently adsorbed by the affinity column, in addition to the three enzymes already listed. The maintenance of full protein synthesis activity in these lysates required the addition of both a sugarphosphate and a reducing agent. The sugar phosphate requirement could be satisfied by glucose 6-phosphate. or 2-deoxyglucose 6- phosphate, or fructose 1,6-bisphosphate, but not by 6-phosphogluconic acid. The requirement for reducing agent could be met by the addition of dithiothreitol, or by an NADPH-generating system together with rabbit thioredoxin ceductase. Purified thioredoxin reductase from Escherichia coli was also effective provided E. coli thioredoxin was also added, but the addition of glutathione with glutathione reductase did not activate protein synthesis. It is concluded that there is a dual requirement for the maintenance of high rates of protein synthesis in reticulocyte lysates: certain sugar phosphates must be present. in addition to an NADPI-I-generating system and a functional thioredoxin/thioredoxin reductase system. [ABSTRACT FROM AUTHOR]
- Published
- 1983
- Full Text
- View/download PDF
37. A Novel One-Carbon Carrier (Carboxy-5,6,7,8-tetrahydromethanopterin) Isolated from <em>Methanobacterium thermoautotrophicum</em> and Derived from Methanopterin.
- Author
-
Keltjens, Jan T., Daniels, Lacy, Jannsen, Henny G., Borm, Paul J., and Vogels, Godfried D.
- Subjects
CHROMATOGRAPHIC analysis ,SPECTRUM analysis ,SURFACE chemistry ,NUCLEAR magnetic resonance spectroscopy ,HEXOSAMINES ,CARBOXYLIC acids - Abstract
During short-term labeling experiments, cells of Methanohacterium thermoautolrophicum incorporated a substantial part of
14 CO2 in a compound with a bright yellow fluorescence on dry thin-layer chromatography plates and called yellow fluorescent compound (YFC) [Daniels, L, and Zeikus, J. G. (1978) J. Baeteriol. 136, 75 - 84]. This compound was extracted and purified by ion-exchange column chromatography with formic acid gradients up to 0.3 M. Out of 325 g wet cells of M. thermoautotrophicum about 4 mg of the compound were isolated. This material and some degradation products obtained from it were studied by means of chemical decomposition, ultraviolet-visible- light spectroscopy and preliminary1 H-NMR spectroscopy. It has structural elements in common with methanopterin (see preceding paper in this journal); these elements are a pterin group, glutamate, a hexosamine. The pterin in this compound is present in a reduced form, presumably as 5,6,7,8-tetrahydromethanopterin, and the additional one-carbon unit is probably present as a carboxy group. Probably the first step of methanogenesis implies a carboxylation of methanopterin and a concomitant reduction of the pterin. The trivial name carboxy-5,6,7,8-tetrahydromethanopterin is introduced for the compound. [ABSTRACT FROM AUTHOR]- Published
- 1983
- Full Text
- View/download PDF
38. Purification and Characterization of Bovine Gastricsin.
- Author
-
Martin, Patrice, Trieu-Cuot, Patrick, Collin, Jean-Claude, and Ribadeau Dumas, Bruno
- Subjects
CHEMICAL purification ,PEPSIN ,CHROMATOGRAPHIC analysis ,HYDROXYAPATITE ,AMINO acids ,ANALYTICAL chemistry ,BIOCHEMISTRY - Abstract
The results reported in the present paper and N-terminal sequence homologies established by other authors strongly support the assumption that the gastric protease previously called bovine pepsin I or bovine pepsin B belongs to the aspartate protease group and corresponds to gastricsin (or pepsin C) (EC 3.4.23.3) from other species. Bovine gastricsin was prepared from commercial extracts of adult bovine veils by a procedure involving DEAE-cellulose chromatography, gel filtration on Sephacryl S-200 and a further DEAE-cellulose chromatography. The preparation thus obtained was shown to be free of chymosin and bovine pepsin A by immunodiffusion, selective inactivation in urea and isoelectric focusing. Us molecular weight was estimated by gel filtration to be 32800. Bovine gastricsin displayed microheterogeneity on isoelectric focusing with pi values of the components ranging from 3.5 to 4.0. Chromatography of bovine gastricsin on hydroxyapatite separated three fractions, none of them being homogeneous by isoelectric focusing. Concanavalin-A—Sepharose 4B bound bovine gastricsin to some extent, but without any significant fractionation. Proteolytic activity could be detected directly on the isoelectric focusing gel for all the components of gastricsin and its fractions from hydroxyapatite and concanavalin-A—Sepharose 4B. Bovine gastricsin and its fractions from hydroxyapatite have similar amino acid compositions, different from those of bovine chymosin and pepsin A but obviously related to those of human, simian and porcine gastricsins. Bovine gastricsin which is inactivated by reaction with diazoacetyl-DL-norleucine methyl ester and with 1,2-epoxy-(p-nitrophenoxy)propane in a 1:1 and 1:2 stoichiometry, respectively, is able to hydrolyse a synthetic hexapeptide, Leu-Ser-Phe(NO
2 )-Nle-Ala-Leu-OMe, used as reference substrate for aspartate proteases, and exhibits a low activity towards N-acetyl-L-phenylalanyl-L-diiodotyrosine. Its specific clotting activity with χ-casein as substrate is only half of that of chymosin and pepsin A. [ABSTRACT FROM AUTHOR]- Published
- 1982
- Full Text
- View/download PDF
39. A-Active Trisaccharides Isolated from A, and A2 Blood-Group-Specific Glycoproteins.
- Author
-
Donald, Alastair S. R.
- Subjects
POLYSACCHARIDES ,GLYCOPROTEINS ,ION exchange resins ,CHROMATOGRAPHIC analysis ,FLUID mechanics ,PROTEINS - Abstract
Blood-group-specific glycoproteins obtained from ovarian cyst fluids of A
1 and A2 persons were degraded with NaOH/NaBH4 . The oligosaccharides released were de-N-acetylated with Ba(OH)2 and then hydrolysed with dilute H2 SO4 . The products were fractionated on columns of ion-exchange resin and the components isolated were re-N-acetylated with14 C-labelled acetic anhydride; further purification was effected by paper chromatography. The following trisaccharides: type 1, GaINAc(αl - 3)Gal(βl - 3)G1cNAc; type 2, Ga1NAc(αl - 3)- Gal(βl -4)GlcNAc; type 3 (reduced), GalNAc(αl - 3)Gal(β1 - 3)GalNAcOH (where Gal is galactose, GalNAc is N-acetylgalactosamine, G1cNAc is N-acetylglucosamine and Ga1NAcOH is N-acetylgalactosaminitol) were isolated and characterised from both the A1 and A2 materials. The type 3 (reduced) trisaccharide has not previously been obtained from human glycoproteins. Chromatographic evidence indicated that the three trie saccharide structures were also present in other A1 , A2 , A1 B and A2 B ovarian cyst glycoproteins and in A1 and A2 salivary glycoproteins. These findings are not indicative of structural differences between the A determinants of A1 and A2 glycoproteins. [ABSTRACT FROM AUTHOR]- Published
- 1981
- Full Text
- View/download PDF
40. Surface Labeling of Membrane Glycoproteins and Their Drastic Changes during Development of <em>Dictyostelium discoideum</em>.
- Author
-
Toda, Katsumi, Ken-ichi Ono, and Ochiai, Hiroshi
- Subjects
GLYCOPROTEINS ,CELL membranes ,ELECTROPHORESIS ,GEL electrophoresis ,MEMBRANE proteins ,HYDROLYSIS ,CHROMATOGRAPHIC analysis - Abstract
Surface glycoproteins on plasma membranes from Dictyostelium discoideum were labeled by sodium metaperiodate oxidation and sodium boro[³H]hydride reduction. The amount of incorporation of tritium from NaB³H
4 reached a plateau after 10 min at a periodate concentration of 20 mM. The density analysis carried out by sucrose density-gradient centrifugation showed that the plasma membranes were selectively labeled by this technique. About 84% of the radioactivity incorporated was released by hydrolysis with 0.25 M H2 SO4 for 3 h at 100 °C. The released materials were eluted at a bed volume after chromatography using a Sephadex G-50 column. From the paper chromatographic analysis of the eluate, four radioactive spots were detected. Two of them were glycerol and glyceraldehyde and the other two spots seemed to be oligosaccharides. Using the above method, the plasma membranes from aggregation-phase cells were labeled four times more than those from growth-phase cells. The labeled plasma membrane fraction during the aggregation phase was separated into at least 39 distinct glycoprotein bands on a one-dimensional dodecylsulfate/polyacrylamide gel. Six of the 39 bands increased markedly in density and two new bands appeared. In contrast, four bands decreased in density in the aggregation phase. Using this method, the surface glycoproteins can be analyzed directly by gel electrophoresis of the lysate of labeled whole cells without preparing the plasma membranes. Changes during development of glycoproteins on outer cell surfaces were also confirmed by O'Farrell's method of two-dimensional polyacrylamide gel electrophoresis. Utilizing this technique, glycoproteins on plasma membranes of D. discoideum were separated into 63 individual spots; 45 of these 63 spots changed during the early developmental course of D. discoideum. This is in contrast to the slight change in the soluble and membrane proteins during this phase. This fact also suggests that the glycoproteins have important roles in the process of aggregation. [ABSTRACT FROM AUTHOR]- Published
- 1980
- Full Text
- View/download PDF
41. Glycogen Synthase Kinase-3 from Rabbit Skeletal Muscle.
- Author
-
Embi, Noor, Rylatt, Dennis B., and Cohen, Philip
- Subjects
PROTEIN kinases ,ENZYMES ,CHEMICAL reactions ,CHROMATOGRAPHIC analysis ,ELECTRONS ,NUCLEOPROTEINS ,BASIC proteins ,PROTEIN analysis - Abstract
1. A glycogen synthase kinase was partially purified from rabbit skeletal muscle by precipitation with ammonium sulphate, chromatography on DEAE-cellulose and chromatography on hydroxy- apatite. 2. The enzyme was highly specific for glycogen synthase. In the standard assay, the relative rates of phosphorylation were: glycogen synthase (100), phosvitin (2.5), phosphorylase kinase ( < 1). casein (0.3), protein phosphatase inhibitor-1 (< 0.1), phosphorylase (< 0.01), mixed histones (< 0.01). The enzyme was separated from virtually all phosvitin kinase and casein kinase activity by the chromatography on DEAE-cellulose. 3. The Km values for ATP and GTP were 0.02 mM and 0.5 mM respectively, and a similar maximum reaction velocity was obtained with each nucleoside triphosphate. The activity of the enzyme was unaffected by cyclic AMP, cyclic GMP, calcium ions, calcium ions plus calmodulin, and the specific protein inhibitor of cyclic-AMP-dependent protein kinase. 4. The properties of the enzyme demonstrated that it was distinct from both cyclic-AMP- dependent protein kinase and phosphorylase kinase, the two well characterized glycogen synthase kinases in skeletal muscle. This enzyme was therefore termed glycogen synthase kinase-3. 5. The phosphorylation of glycogen synthase by glycogen synthase kinase-3 reached a pleateau near 1.5 molecule phosphate incorporated per subunit under optimal conditions. The activity of glycogen synthase measured in the absence of glucose 6-phosphate was decreased fivefold and the apparent Ka for glucose 6-phosphate was increased 15-fold, when 1,2 molecule phosphate per sub-unit had been introduced into the enzyme. Phosphorylation to a similar extent with either cyclic-AMP-dependent protein kinase or phosphorylase kinase produced smaller changes in activity. 6. Glycogen synthase was phosphorylated by cyclic-AMP-dependent protein kinase, phosphorylase kinase and glycogen synthase kinase-3, using conditions where the phosphorylation by any one protein kinase reached a plateau near one molecule of phosphate incorporated per subunit, The different protein kinases were used separately and in combination to generate seven different phosphorylated species of glycogen synthase. The phosphorylation of glycogen synthase approached two molecules per subunit when any two protein kinases were combined, and three molecules per subunit when all three protein kinases were combined, and the inactivation produced by the different protein kinases was essentially additive. The results imply that each protein kinase preferentially phosphorylates a different site(s) on glycogen synthase, and this is confirmed by the amino acid sequence analysis described in the following paper in this journal. [ABSTRACT FROM AUTHOR]
- Published
- 1980
- Full Text
- View/download PDF
42. Actin in Mammalian Lens.
- Author
-
Kibbelaar, Mac A., Selten-Versteegen, Anne-Marie E., Dunia, Irène, Benedetti, E. Lucio, and Bloemendal, Hans
- Subjects
ACTIN ,IMINO acids ,CHROMATOGRAPHIC analysis ,DEOXYRIBONUCLEASES ,NUCLEASES ,DNA - Abstract
In this paper evidence is provided that one of the protein components of the water-soluble fraction of the call lens binds specifically to deoxyribonuclease I (DNAse I). On the basis of this property, the polypeptide could be purified by applying DNAse I affinity chromatography. Concomitantly a protein of M
r 55000 and a rather large amount of α-crystallin copurify with this polypeptide, which has a molecular weight of 42000. Highly purified 42000-Mr protein was also obtained by extraction of the water-insoluble fraction of the calf lens with 2-{(tris(hydroxyniethyl)methyl]amino}ethanesulfonic acid followed by gel filtration. Amino acid analyses, peptide mapping and electron microscopy show that the protein obtained from both lens fractions is identical to non-muscle actin. Furthermore the amino acid composition of the 55 000-Mr protein is identical to hog stomach skeletin and very similar to calf brain desmin. [ABSTRACT FROM AUTHOR]- Published
- 1979
- Full Text
- View/download PDF
43. Production, Purification and Partial Characterization of 1,4-β-Glucosidase Enzymes from <em>Sporotrichum pulverulentum</em>.
- Author
-
Deshpande, Vasanti, Eriksson, Karl-Erik, and Pettersson, Bert
- Subjects
CHROMATOGRAPHIC analysis ,POLYACRYLAMIDE ,ENZYMES ,PROTEINS ,COLLOIDS ,PERMEABILITY ,DIALYSIS (Chemistry) - Abstract
The production of 1,4-β-glucosidase activity by the rot fungus Sporotrichum pulverulentum has been investigated. It was found that cellobiose or cellulose is necessary to cause induction. With cellobiose as sole carbon source only cell-wall-bound enzymes are produced. For extracellular excretion cellulose seems to be a necessary carbon source. The purification procedures, for purification of enzyme activity in the culture solution, involve the following steps: (a) ultrafiltration, (NH
4 )2 SO4 precipitation and dialyses; (b) preparative slab gel isoelectric focusing I, pH range 3–10; (c) phenyl-Sepharose chromatography; (d) preparative slab gel isoelectric focusing II, pH range 3–5. On the phenyl-Sepharose column the β-glucosidase activity was associated with two separable enzyme peaks, enzyme A and B. When these enzymes were subjected to further purification on preparative isoelectric focusing II, enzyme A was split into two peaks, A1 and A2 , and enzyme B was split into three peaks, B1 , B2 and B3 . The significance of the separations is discussed. The isoelectric points of all the enzymes have been determined and found to vary between 4.52 to 5.15. The molecular weights, determined by dodecylsulphate-polyacrylamide gel electrophoresis, vary between 165000 and 182000. The kinetic constants Km and Ki have been determined for enzyme A and B as well as for the cell-bound β-glucosidase activity. Km for cellobiose was for both enzyme A and B higher than Km for p-nitrophenyl β-D-glucoside. Km /Ki of the free enzymes for gluconolactone is approximately 2500 (enzyme B) to 13000 (enzyme A) with cellobiose as substrate. [ABSTRACT FROM AUTHOR]- Published
- 1978
- Full Text
- View/download PDF
44. Isolation and Characterization of Structural Components of Bacillus cereus AHU 1356 Cell Walls.
- Author
-
Amano, Ken-Ichi, Hazama, Setsuro, Araki, Yoshio, and Ito, Eiji
- Subjects
LYSOZYMES ,BACILLUS cereus ,GLYCOSIDASES ,PROTON magnetic resonance ,COLLOIDS ,SOLVOLYSIS ,CHROMATOGRAPHIC analysis - Abstract
From lysozyme digests of the N-acetylated cell walls of Bacillus cereus AHU 1356, a polysaccharide fraction and a teichoic acid fraction were isolated by ion-exchange chromatography and gel chromatography. The former fraction, accounting for 50% of the walls, contained N-acetylglucosamine, N-acetylmannosamine, N-acetylgalactosamine and glucose in a molar ratio of 4: 1: 1: 1 together with a small amount of the peptidoglycan constituents. The latter fraction accounted for 5% of the walls and was composed of N-acetylglucosamine, galactose, glycerol and phosphorus in a molar ratio of 1:1.4: 1:1 and a small amount of the peptidoglycan constituents. The molecular weight of the polysaccharide fraction was about 33000 as estimated by gel chromatography. After acid hydrolysis of the polysaccharide fraction, a stoichiometric amount of muramic acid 6-phosphate was detected which was probably involved in the linkage between the polysaccharide and peptidoglycan moieties. The polysaccharide moiety detached from the peptidoglycan components by mild acid hydrolysis was isolated as material with an approximate molecular weight of 28000. Structural studies on the polysaccharide, involving Smith degradation, CrO
3 oxidation and proton magnetic resonance spectrometry of the polysaccharide fraction together with the analysis of oligosaccharides obtained from partial acid hydrolysis of the polysaccharide fraction, led to the tentative formulation of the most likely structure of the repeating unit as follows ... [ABSTRACT FROM AUTHOR]- Published
- 1977
- Full Text
- View/download PDF
45. An Isolation Procedure for the Native α Chain of Bovine Hemoglobin.
- Author
-
De Briun, Simon H., Joordens, Jos J., and Rollema, Harry S.
- Subjects
LIGANDS (Biochemistry) ,CHROMATOGRAPHIC analysis ,HEMOGLOBINS ,COORDINATION compounds ,ANIMAL models in research ,BIOCHEMISTRY - Abstract
In this paper we present a procedure for the isolation of the native bovine α chain. The method is based on affinity chromatography. The results show that the ligand-binding properties of the bovine α chain are almost identical to those of the human α chain. The hybrid α
2 B β2 H prepared by mixing bovine α chains a human β chains shows ligand binding properties similar to those of human hemoglobin and different from those of bovine hemoglobin. [ABSTRACT FROM AUTHOR]- Published
- 1977
- Full Text
- View/download PDF
46. Snake Venom Toxins.
- Author
-
Joubert, Fran&ccerc;dilois J.
- Subjects
TOXINS ,VENOM ,GEL permeation chromatography ,CHROMATOGRAPHIC analysis ,SEPHADEX ,BIOCHEMISTRY - Abstract
Three toxins (CM-8, CM-11, and CM-13 a) were purified from the venom of Naja haje annulifera by gel filtration on Sephadex G-50 and by ion-exchange chromatography on CM-cellulose, Whereas toxin CM-8 and CM-11 comprise 60 amino acid residues, toxin CM-13a contains 6t residues. All three toxins are cross-linked by four intrachain disulphide bridges. The complete amino acid sequences of these toxins have been elucidated. The reduced and S-carboxymethylated toxins were digested with trypsin and chymotrypsin and the peptides purified by ion-exchange chromatography, gel filtration and chromatography or electrophoresis on paper. The Edman procedure, either through the use of the automatic sequencer or by manual manipulation, was employed to obtain the sequence of the intact toxins and the pure peptides. The chymotryptic digests provided the necessary overlapping peptides which allowed the alignment of the tryptic peptides. The properties of the three toxins were compared with those of the cytotoxin group. The toxicities the serological properties, the sequences and the invariant amino acid residues of toxin CM-8 and CM-tt resemble the corresponding properties of the cytotoxin group, Tile sequence and serological properties of toxin CM-13a show that it is related to the cytotoxin group, but its toxicity is much lower than those encountered in the cytotoxin group, [ABSTRACT FROM AUTHOR]
- Published
- 1976
47. α-L-Rhamnosidase de <em>Fagopyrum esculentum</em>.
- Author
-
Bourbouze, Richard, Percheron, François, and Courtois, Jean-Emile
- Subjects
BUCKWHEAT ,ENZYMES ,CHROMATOGRAPHIC analysis ,HYDROCARBONS ,BIOCHEMISTRY - Abstract
An α-L-rhamnosidase from the seeds of Fagopyrum esculentum (saracen corn) has previously been identified, and the effect of the enzyme on rhamnosic bonds has been studied with various flavonoid glycosides. This α-L-rhamnosidase can be useful in structural studies, and a preliminary report of this study has appeared. The present paper describes the extensive purification of the enzyme and the determination of its properties. The purification involved extraction, ammonium sulfate fractionation and chromatography on Sephadex G 75, DEAE-Sephadex and Ultrogel AcA-44. The α-L-rhamnosidase was purified about 9600 fold and the final enzyme preparation was practically pure according to the criteria of disc electrophoresis. The molecular weight of this α-L-rhamnosidase, calculated from data obtained by disc gel electrophoresis and gel filtration, was about 70000. Isoelectric focusing established the isoelectric point to be 3.7. The behaviour of the enzyme on a concanavalin-A-Sepharose column suggests the presence of residues resembling α-D-mannose or α-D-glucose in the protein. The various kinetic parameters, K
cat , Km and the Kcat /Km ratio have been determined at pH 5 on the following substrates: p-nitrophenyl-α-L-rhamnoside and rutinose (6-O-α-L-rhamnosyl-D-glucopyranose). All kinetics exhibit a Michaelian behaviour and the Km for the former substrate was 0.33 mM and for the latter, 2.2 raM. The Kcat /Km ratio corroborates the greater specificity of the enzyme for p-nitrophenyl-α-L-rhamnoside. L-Rhamnose, L-lyxose, 6-deoxy-D-glucose and methyl-α-D-mannoside were shown to behave strictly as competitive inhibitors of α-L-rhamnosidase activity; it seems that the methyl group of L-rhamnose is important for substrate binding to the enzyme. [ABSTRACT FROM AUTHOR]- Published
- 1976
- Full Text
- View/download PDF
48. The Mechanism of Enzymatic Cellulose Degradation.
- Author
-
Berghem, Lars E. R., Pettersson, L. Göran, and Axio-Fredriksson, Ulla-Britt
- Subjects
ENZYMES ,AMINO acids ,ELECTROPHORESIS ,CHROMATOGRAPHIC analysis ,PHYSICAL & theoretical chemistry ,MOLECULAR weights ,BIOCHEMISTRY - Abstract
A low-molecular-weight and a high-molecular-weight 1,4-β-glucan glucanohydrolase (C
χ enzyme) have been isolated from a commercial cellulase preparation derived from culture filtrates of the fungus THchoderma vMde. The purification method for the isolation of the low-molecular-weight enzyme is a three-step procedure including chromatography on Bio-Gel P-10, chromatography on a dipolar adsorbent (arginine-fiepharose 6 B) and isoelectric focusing. The starting material for the isolation of the high-molecular-weight enzyme was pre-fractionated by chromatography on Bio-Gel P-10, by DEAE-Sephadex chromatography and by SE-Sephadex chromatography as described previously by us. Further fractionation of this material was achieved by affinity chromatography and repeated isoelectric focusing. Free zone electrophoresis of the low-molecular-weight enzyme indicated a homogeneous protein. The high-molecular-weight enzyme was homogeneous in sedimentation equilibrium analysis. The molecular weights of the enzymes were 12 500 and 50 000 ± 2000 respectively. The former value was determined by chromatography on a calibrated column of Bio-Gel P-100 and the latter value by sedimentation equilibrium analysis. The low-molecular-weight enzyme was isoelectric at pH 4.60 (10°C) and contained 21% carbohydrate. The corresponding values for the high-molecular-weight enzyme were pH 3.39 and 12%. Both enzymes were active in releasing free fibers from filter-paper. The low-molecular-weight enzyme was estimated to be about twice as effective as the high-molecular-weight enzyme in this regard. [ABSTRACT FROM AUTHOR]- Published
- 1976
- Full Text
- View/download PDF
49. Studies on Phenylalanine-Specific Transfer Ribonucleic Acid from Chick Embryos.
- Author
-
Wittig, Burghardt, Reuter, Stephanie, and Gottschling, Hubert
- Subjects
TRANSFER RNA ,PHENYLALANINE ,EMBRYOS ,CHICKS ,CHROMATOGRAPHIC analysis ,ULTRAVIOLET radiation ,SPECTRUM analysis - Abstract
The phenylalanine-specific tRNA
Phe from 13-day-old chick embryo muscle was purified. Its fluorescent and hydrophobic Y+ base was excised by mild acid treatment and characterized chromatographically and by its ultraviolet absorption and fluorescent spectra. The compound obtained after removal of the Y+ base from chick embryo tRNAPhe was characterized. 1. Chick embryo t RNAPhe looses by the removal of the Y+ base its phenylalanine acceptor capacity. 2. In this state it has a reduced sedimentation coefficient of 2.8 S. a low Tm value (22 °C), only rudimentary hyperchromicity, but unchanged electrophoretic properties. 3. The compound obtained after removal of the Y+ base from chick embryo tRNAPhe regains normal melting behaviour and phenylalanine acceptor capacity when exposed to special renaturation conditions. 4. The Km of the renatured form is 0.25 × 10-6 M and V = 220 pmol × min-1 × ml-1 as compared tO Km = 0.11 × 10-6 M and V = 370 pmol x min-1 × ml-1 for the native chick embryo tRNAPhe . [ABSTRACT FROM AUTHOR]- Published
- 1974
- Full Text
- View/download PDF
50. Molecular Forms of Rat-Liver Arginase. Isolation and Characterization.
- Author
-
Tarrab, Rebeca, Rodríguez, Jesús, Huitrón, Carlos, Palacios, Rafael, and Soberón, Guillermo
- Subjects
LIVER ,MOLECULAR structure ,ISOENZYMES ,CHROMATOGRAPHIC analysis ,LABORATORY rats - Abstract
Debate continues over the physical characteristics and even the existence of arginase isoenzymes. This paper gives additional support for such multiplicity and reports differences in physical characteristics among the various forms. After 2500-5000-fold purification of rat liver arginase, three molecular forms were separated on carboxymethyl-cellulose columns and were purified 2500-5000-fold, 800-1000-fold and 600-1000-fold, respectively. The molecular forms have also been identified by chromatography in the supernatant of tissue extracts. The isolation of these molecular forms by affinity chromatography, using Sepharose-lysine as a competitive inhibitor of arginase, shows only one main form, however. Kinetic studies were done for two of the molecular forms isolated, specifically the activation energy (E
a , the energy of denaturatization (Ed ), Km , pH and the effect of divalent cations were determined. Significant differences were found for the Ea between the two molecular forms. The isolated isoenzymes are cationic at pH 5.5 and pH 8.8. However, they show different mobilities in electrophoresis. The molecular weight determination by gel filtration yields a value of 110000 to 115000 for both forms. The use of thin-layer immunochromatography plates, a combination of molecular weight and immunodiffusion technique, gave only one peak with the same molecular weight as that determined by gel filtration. The immunological studies showed that the isoenzymes have similar antigenic determinants. [ABSTRACT FROM AUTHOR]- Published
- 1974
- Full Text
- View/download PDF
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.