Search

Your search keyword '"Shmuel, Amir"' showing total 140 results
Start Over Author "Shmuel, Amir" Publication Year Range Last 3 years
140 results on '"Shmuel, Amir"'

1. NestedMorph: Enhancing Deformable Medical Image Registration with Nested Attention Mechanisms

Author

Kumar, Gurucharan Marthi Krishna, Mendola, Janine, and Shmuel, Amir

Subjects
Electrical Engineering and Systems Science - Image and Video Processing, Computer Science - Computer Vision and Pattern Recognition
Abstract

Deformable image registration is crucial for aligning medical images in a non-linear fashion across different modalities, allowing for precise spatial correspondence between varying anatomical structures. This paper presents NestedMorph, a novel network utilizing a Nested Attention Fusion approach to improve intra-subject deformable registration between T1-weighted (T1w) MRI and diffusion MRI (dMRI) data. NestedMorph integrates high-resolution spatial details from an encoder with semantic information from a decoder using a multi-scale framework, enhancing both local and global feature extraction. Our model notably outperforms existing methods, including CNN-based approaches like VoxelMorph, MIDIR, and CycleMorph, as well as Transformer-based models such as TransMorph and ViT-V-Net, and traditional techniques like NiftyReg and SyN. Evaluations on the HCP dataset demonstrate that NestedMorph achieves superior performance across key metrics, including SSIM, HD95, and SDlogJ, with the highest SSIM of 0.89, and the lowest HD95 of 2.5 and SDlogJ of 0.22. These results highlight NestedMorph's ability to capture both local and global image features effectively, leading to superior registration performance. The promising outcomes of this study underscore NestedMorph's potential to significantly advance deformable medical image registration, providing a robust framework for future research and clinical applications. The source code and our implementation are available at: https://bit.ly/3zdVqcg

Published
2024

2. MedVisionLlama: Leveraging Pre-Trained Large Language Model Layers to Enhance Medical Image Segmentation

Author

Kumar, Gurucharan Marthi Krishna, Chadha, Aman, Mendola, Janine, and Shmuel, Amir

Subjects
Electrical Engineering and Systems Science - Image and Video Processing, Computer Science - Computation and Language, Computer Science - Computer Vision and Pattern Recognition
Abstract

Large Language Models (LLMs), known for their versatility in textual data, are increasingly being explored for their potential to enhance medical image segmentation, a crucial task for accurate diagnostic imaging. This study explores enhancing Vision Transformers (ViTs) for medical image segmentation by integrating pre-trained LLM transformer blocks. Our approach, which incorporates a frozen LLM transformer block into the encoder of a ViT-based model, leads to substantial improvements in segmentation performance across various medical imaging modalities. We propose a Hybrid Attention Mechanism that combines global and local feature learning with a Multi-Scale Fusion Block for aggregating features across different scales. The enhanced model shows significant performance gains, including an average Dice score increase from 0.74 to 0.79 and improvements in accuracy, precision, and the Jaccard Index. These results demonstrate the effectiveness of LLM-based transformers in refining medical image segmentation, highlighting their potential to significantly boost model accuracy and robustness. The source code and our implementation are available at: https://bit.ly/3zf2CVs

Published
2024

5. A consensus protocol for functional connectivity analysis in the rat brain

Author

Grandjean, Joanes, Desrosiers-Gregoire, Gabriel, Anckaerts, Cynthia, Angeles-Valdez, Diego, Ayad, Fadi, Barrière, David A., Blockx, Ines, Bortel, Aleksandra, Broadwater, Margaret, Cardoso, Beatriz M., Célestine, Marina, Chavez-Negrete, Jorge E., Choi, Sangcheon, Christiaen, Emma, Clavijo, Perrin, Colon-Perez, Luis, Cramer, Samuel, Daniele, Tolomeo, Dempsey, Elaine, Diao, Yujian, Doelemeyer, Arno, Dopfel, David, Dvořáková, Lenka, Falfán-Melgoza, Claudia, Fernandes, Francisca F., Fowler, Caitlin F., Fuentes-Ibañez, Antonio, Garin, Clément M., Gelderman, Eveline, Golden, Carla E. M., Guo, Chao C. G., Henckens, Marloes J. A. G., Hennessy, Lauren A., Herman, Peter, Hofwijks, Nita, Horien, Corey, Ionescu, Tudor M., Jones, Jolyon, Kaesser, Johannes, Kim, Eugene, Lambers, Henriette, Lazari, Alberto, Lee, Sung-Ho, Lillywhite, Amanda, Liu, Yikang, Liu, Yanyan Y., López -Castro, Alejandra, López-Gil, Xavier, Ma, Zilu, MacNicol, Eilidh, Madularu, Dan, Mandino, Francesca, Marciano, Sabina, McAuslan, Matthew J., McCunn, Patrick, McIntosh, Alison, Meng, Xianzong, Meyer-Baese, Lisa, Missault, Stephan, Moro, Federico, Naessens, Daphne M. P., Nava-Gomez, Laura J., Nonaka, Hiroi, Ortiz, Juan J., Paasonen, Jaakko, Peeters, Lore M., Pereira, Mickaël, Perez, Pablo D., Pompilus, Marjory, Prior, Malcolm, Rakhmatullin, Rustam, Reimann, Henning M., Reinwald, Jonathan, Del Rio, Rodrigo Triana, Rivera-Olvera, Alejandro, Ruiz-Pérez, Daniel, Russo, Gabriele, Rutten, Tobias J., Ryoke, Rie, Sack, Markus, Salvan, Piergiorgio, Sanganahalli, Basavaraju G., Schroeter, Aileen, Seewoo, Bhedita J., Selingue, Erwan, Seuwen, Aline, Shi, Bowen, Sirmpilatze, Nikoloz, Smith, Joanna A. B., Smith, Corrie, Sobczak, Filip, Stenroos, Petteri J., Straathof, Milou, Strobelt, Sandra, Sumiyoshi, Akira, Takahashi, Kengo, Torres-García, Maria E., Tudela, Raul, van den Berg, Monica, van der Marel, Kajo, van Hout, Aran T. B., Vertullo, Roberta, Vidal, Benjamin, Vrooman, Roël M., Wang, Victora X., Wank, Isabel, Watson, David J. G., Yin, Ting, Zhang, Yongzhi, Zurbruegg, Stefan, Achard, Sophie, Alcauter, Sarael, Auer, Dorothee P., Barbier, Emmanuel L., Baudewig, Jürgen, Beckmann, Christian F., Beckmann, Nicolau, Becq, Guillaume J. P. C., Blezer, Erwin L. A., Bolbos, Radu, Boretius, Susann, Bouvard, Sandrine, Budinger, Eike, Buxbaum, Joseph D., Cash, Diana, Chapman, Victoria, Chuang, Kai-Hsiang, Ciobanu, Luisa, Coolen, Bram F., Dalley, Jeffrey W., Dhenain, Marc, Dijkhuizen, Rick M., Esteban, Oscar, Faber, Cornelius, Febo, Marcelo, Feindel, Kirk W., Forloni, Gianluigi, Fouquet, Jérémie, Garza-Villarreal, Eduardo A., Gass, Natalia, Glennon, Jeffrey C., Gozzi, Alessandro, Gröhn, Olli, Harkin, Andrew, Heerschap, Arend, Helluy, Xavier, Herfert, Kristina, Heuser, Arnd, Homberg, Judith R., Houwing, Danielle J., Hyder, Fahmeed, Ielacqua, Giovanna Diletta, Jelescu, Ileana O., Johansen-Berg, Heidi, Kaneko, Gen, Kawashima, Ryuta, Keilholz, Shella D., Keliris, Georgios A., Kelly, Clare, Kerskens, Christian, Khokhar, Jibran Y., Kind, Peter C., Langlois, Jean-Baptiste, Lerch, Jason P., López-Hidalgo, Monica A., Manahan-Vaughan, Denise, Marchand, Fabien, Mars, Rogier B., Marsella, Gerardo, Micotti, Edoardo, Muñoz-Moreno, Emma, Near, Jamie, Niendorf, Thoralf, Otte, Willem M., Pais-Roldán, Patricia, Pan, Wen-Ju, Prado-Alcalá, Roberto A., Quirarte, Gina L., Rodger, Jennifer, Rosenow, Tim, Sampaio-Baptista, Cassandra, Sartorius, Alexander, Sawiak, Stephen J., Scheenen, Tom W. J., Shemesh, Noam, Shih, Yen-Yu Ian, Shmuel, Amir, Soria, Guadalupe, Stoop, Ron, Thompson, Garth J., Till, Sally M., Todd, Nick, Van Der Linden, Annemie, van der Toorn, Annette, van Tilborg, Geralda A. F., Vanhove, Christian, Veltien, Andor, Verhoye, Marleen, Wachsmuth, Lydia, Weber-Fahr, Wolfgang, Wenk, Patricia, Yu, Xin, Zerbi, Valerio, Zhang, Nanyin, Zhang, Baogui B., Zimmer, Luc, Devenyi, Gabriel A., Chakravarty, M. Mallar, and Hess, Andreas

Published
2023
Full Text
View/download PDF

15. Preliminary nonclinical safety and immunogenicity of an rVSV-ΔG-SARS-CoV-2-S vaccine in mice, hamsters, rabbits and pigs

Author

Madar-Balakirski, Noa, Rosner, Amir, Melamed, Sharon, Politi, Boaz, Steiner, Michal, Tamir, Hadas, Yahalom-Ronen, Yfat, Bar-David, Elad, Ben-Shmuel, Amir, Sittner, Assa, Glinert, Itai, Weiss, Shay, Bar-Haim, Erez, Cohen, Hila, Elia, Uri, Achdout, Hagit, Erez, Noam, Rotem, Shahar, Lazar, Shlomi, Nyska, Abraham, Yitzhaki, Shmuel, Beth-Din, Adi, Levy, Haim, Paran, Nir, Israely, Tomer, and Marcus, Hadar

Published
2022
Full Text
View/download PDF

17. LAMP-Seq enables sensitive, multiplexed COVID-19 diagnostics using molecular barcoding

Author

Ludwig, Kerstin U., Schmithausen, Ricarda M., Li, David, Jacobs, Max L., Hollstein, Ronja, Blumenstock, Katja, Liebing, Jana, Słabicki, Mikołaj, Ben-Shmuel, Amir, Israeli, Ofir, Weiss, Shay, Ebert, Thomas S., Paran, Nir, Rüdiger, Wibke, Wilbring, Gero, Feldman, David, Lippke, Bärbel, Ishorst, Nina, Hochfeld, Lara M., Beins, Eva C., Kaltheuner, Ines H., Schmitz, Maximilian, Wöhler, Aliona, Döhla, Manuel, Sib, Esther, Jentzsch, Marius, Borrajo, Jacob D., Strecker, Jonathan, Reinhardt, Julia, Cleary, Brian, Geyer, Matthias, Hölzel, Michael, Macrae, Rhiannon, Nöthen, Markus M., Hoffmann, Per, Exner, Martin, Regev, Aviv, Zhang, Feng, and Schmid-Burgk, Jonathan L.

Published
2021
Full Text
View/download PDF

19. Integrating Plasma Transcriptomics and Brain Radiomics to Identify Biomarkers for Diabetic Peripheral Neuropathy

Author

Zhang, Heng, primary, Lv, Kuan, additional, Shi, Ge, additional, Yang, Aocai, additional, Hu, Pianpian, additional, Zhang, Ze, additional, Gao, Zhenxuan, additional, Aori, Gele, additional, Yang, Wenqiang, additional, Wang, Qi, additional, Yuan, Zhen, additional, Shmuel, Amir, additional, Ma, Guolin, additional, and Zhang, Li, additional

Published
2024
Full Text
View/download PDF

20. Author Correction: LAMP-Seq enables sensitive, multiplexed COVID-19 diagnostics using molecular barcoding

Author

Ludwig, Kerstin U., Schmithausen, Ricarda M., Li, David, Jacobs, Max L., Hollstein, Ronja, Blumenstock, Katja, Liebing, Jana, Słabicki, Mikołaj, Ben-Shmuel, Amir, Israeli, Ofir, Weiss, Shay, Ebert, Thomas S., Paran, Nir, Rüdiger, Wibke, Wilbring, Gero, Feldman, David, Lippke, Bärbel, Ishorst, Nina, Hochfeld, Lara M., Beins, Eva C., Kaltheuner, Ines H., Schmitz, Maximilian, Wöhler, Aliona, Döhla, Manuel, Sib, Esther, Jentzsch, Marius, Moench, Eva-Maria C., Borrajo, Jacob D., Strecker, Jonathan, Reinhardt, Julia, Cleary, Brian, Geyer, Matthias, Hölzel, Michael, Macrae, Rhiannon, Nöthen, Markus M., Hoffmann, Per, Exner, Martin, Regev, Aviv, Zhang, Feng, and Schmid-Burgk, Jonathan L.

Published
2022
Full Text
View/download PDF

21. Induction of Superior Systemic and Mucosal Protective Immunity to SARS-CoV-2 by Nasal Administration of a VSV–ΔG–Spike Vaccine.

Author

Yahalom-Ronen, Yfat, Melamed, Sharon, Politi, Boaz, Erez, Noam, Tamir, Hadas, Bar-On, Liat, Ryvkin, Julia, Leshkowitz, Dena, Israeli, Ofir, Weiss, Shay, Ben-Shmuel, Amir, Barlev-Gross, Moria, Cherry Mimran, Lilach, Achdout, Hagit, Paran, Nir, and Israely, Tomer

Subjects
SARS-CoV-2, INTRANASAL administration
Abstract

The emergence of rapidly spreading variants of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) poses a major challenge to vaccines' protective efficacy. Intramuscular (IM) vaccine administration induces short-lived immunity but does not prevent infection and transmission. New vaccination strategies are needed to extend the longevity of vaccine protection, induce mucosal and systemic immunity and prevent viral transmission. The intranasal (IN) administration of the VSV–ΔG–spike vaccine candidate directly to mucosal surfaces yielded superior mucosal and systemic immunity at lower vaccine doses. Compared to IM vaccination in the K18–hACE2 model, IN vaccination preferentially induced mucosal IgA and T-cells, reduced the viral load at the site of infection, and ameliorated disease-associated brain gene expression. IN vaccination was protective even one year after administration. As most of the world population has been vaccinated by IM injection, we demonstrate the potential of a heterologous IM + IN vaccination regimen to induce mucosal immunity while maintaining systemic immunity. Furthermore, the IM + IN regimen prevented virus transmission in a golden Syrian hamster co-caging model. Taken together, we show that IN vaccination with VSV–ΔG–spike, either as a homologous IN + IN regimen or as a boost following IM vaccination, has a favorable potential over IM vaccination in inducing efficient mucosal immunity, long-term protection and preventing virus transmission. [ABSTRACT FROM AUTHOR]

Published
2024
Full Text
View/download PDF

24. Immune-related lncRNAs signature and radiomics signature predict the prognosis and immune microenvironment of glioblastoma multiforme.

Author

Luan, Jixin, Zhang, Di, Liu, Bing, Yang, Aocai, Lv, Kuan, Hu, Pianpian, Yu, Hongwei, Shmuel, Amir, Zhang, Chuanchen, and Ma, Guolin

Subjects
GLIOBLASTOMA multiforme, RADIOMICS, LINCRNA, TUMOR-infiltrating immune cells, BRAIN tumors, DISEASE risk factors
Abstract

Background: Glioblastoma multiforme (GBM) is the most common primary malignant brain tumor in adults. This study aimed to construct immune-related long non-coding RNAs (lncRNAs) signature and radiomics signature to probe the prognosis and immune infiltration of GBM patients. Methods: We downloaded GBM RNA-seq data and clinical information from The Cancer Genome Atlas (TCGA) project database, and MRI data were obtained from The Cancer Imaging Archive (TCIA). Then, we conducted a cox regression analysis to establish the immune-related lncRNAs signature and radiomics signature. Afterward, we employed a gene set enrichment analysis (GSEA) to explore the biological processes and pathways. Besides, we used CIBERSORT to estimate the abundance of tumor-infiltrating immune cells (TIICs). Furthermore, we investigated the relationship between the immune-related lncRNAs signature, radiomics signature and immune checkpoint genes. Finally, we constructed a multifactors prognostic model and compared it with the clinical prognostic model. Results: We identified four immune-related lncRNAs and two radiomics features, which show the ability to stratify patients into high-risk and low-risk groups with significantly different survival rates. The risk score curves and Kaplan–Meier curves confirmed that the immune-related lncRNAs signature and radiomics signature were a novel independent prognostic factor in GBM patients. The GSEA suggested that the immune-related lncRNAs signature were involved in L1 cell adhesion molecular (L1CAM) interactions and the radiomics signature were involved signaling by Robo receptors. Besides, the two signatures was associated with the infiltration of immune cells. Furthermore, they were linked with the expression of critical immune genes and could predict immunotherapy's clinical response. Finally, the area under the curve (AUC) (0.890,0.887) and C-index (0.737,0.817) of the multifactors prognostic model were greater than those of the clinical prognostic model in both the training and validation sets, indicated significantly improved discrimination. Conclusions: We identified the immune-related lncRNAs signature and tradiomics signature that can predict the outcomes, immune cell infiltration, and immunotherapy response in patients with GBM. [ABSTRACT FROM AUTHOR]

Published
2024
Full Text
View/download PDF

26. In Vitro and In Vivo Therapeutic Potential of 6,6′-Dihydroxythiobinupharidine (DTBN) from Nuphar lutea on Cells and K18-hACE2 Mice Infected with SARS-CoV-2

Author

Weiss, Shay, primary, Waidha, Kamran, additional, Rajendran, Saravanakumar, additional, Benharroch, Daniel, additional, Khalilia, Jannat, additional, Levy, Haim, additional, Bar-David, Elad, additional, Golan-Goldhirsh, Avi, additional, Gopas, Jacob, additional, and Ben-Shmuel, Amir, additional

Published
2023
Full Text
View/download PDF

28. Author Correction: A consensus protocol for functional connectivity analysis in the rat brain

Author

Grandjean, Joanes, primary, Desrosiers-Gregoire, Gabriel, additional, Anckaerts, Cynthia, additional, Angeles-Valdez, Diego, additional, Ayad, Fadi, additional, Barrière, David A., additional, Blockx, Ines, additional, Bortel, Aleksandra, additional, Broadwater, Margaret, additional, Cardoso, Beatriz M., additional, Célestine, Marina, additional, Chavez-Negrete, Jorge E., additional, Choi, Sangcheon, additional, Christiaen, Emma, additional, Clavijo, Perrin, additional, Colon-Perez, Luis, additional, Cramer, Samuel, additional, Daniele, Tolomeo, additional, Dempsey, Elaine, additional, Diao, Yujian, additional, Doelemeyer, Arno, additional, Dopfel, David, additional, Dvořáková, Lenka, additional, Falfán-Melgoza, Claudia, additional, Fernandes, Francisca F., additional, Fowler, Caitlin F., additional, Fuentes-Ibañez, Antonio, additional, Garin, Clément M., additional, Gelderman, Eveline, additional, Golden, Carla E. M., additional, Guo, Chao C. G., additional, Henckens, Marloes J. A. G., additional, Hennessy, Lauren A., additional, Herman, Peter, additional, Hofwijks, Nita, additional, Horien, Corey, additional, Ionescu, Tudor M., additional, Jones, Jolyon, additional, Kaesser, Johannes, additional, Kim, Eugene, additional, Lambers, Henriette, additional, Lazari, Alberto, additional, Lee, Sung-Ho, additional, Lillywhite, Amanda, additional, Liu, Yikang, additional, Liu, Yanyan Y., additional, López -Castro, Alejandra, additional, López-Gil, Xavier, additional, Ma, Zilu, additional, MacNicol, Eilidh, additional, Madularu, Dan, additional, Mandino, Francesca, additional, Marciano, Sabina, additional, McAuslan, Matthew J., additional, McCunn, Patrick, additional, McIntosh, Alison, additional, Meng, Xianzong, additional, Meyer-Baese, Lisa, additional, Missault, Stephan, additional, Moro, Federico, additional, Naessens, Daphne M. P., additional, Nava-Gomez, Laura J., additional, Nonaka, Hiroi, additional, Ortiz, Juan J., additional, Paasonen, Jaakko, additional, Peeters, Lore M., additional, Pereira, Mickaël, additional, Perez, Pablo D., additional, Pompilus, Marjory, additional, Prior, Malcolm, additional, Rakhmatullin, Rustam, additional, Reimann, Henning M., additional, Reinwald, Jonathan, additional, Del Rio, Rodrigo Triana, additional, Rivera-Olvera, Alejandro, additional, Ruiz-Pérez, Daniel, additional, Russo, Gabriele, additional, Rutten, Tobias J., additional, Ryoke, Rie, additional, Sack, Markus, additional, Salvan, Piergiorgio, additional, Sanganahalli, Basavaraju G., additional, Schroeter, Aileen, additional, Seewoo, Bhedita J., additional, Selingue, Erwan, additional, Seuwen, Aline, additional, Shi, Bowen, additional, Sirmpilatze, Nikoloz, additional, Smith, Joanna A. B., additional, Smith, Corrie, additional, Sobczak, Filip, additional, Stenroos, Petteri J., additional, Straathof, Milou, additional, Strobelt, Sandra, additional, Sumiyoshi, Akira, additional, Takahashi, Kengo, additional, Torres-García, Maria E., additional, Tudela, Raul, additional, van den Berg, Monica, additional, van der Marel, Kajo, additional, van Hout, Aran T. B., additional, Vertullo, Roberta, additional, Vidal, Benjamin, additional, Vrooman, Roël M., additional, Wang, Victora X., additional, Wank, Isabel, additional, Watson, David J. G., additional, Yin, Ting, additional, Zhang, Yongzhi, additional, Zurbruegg, Stefan, additional, Achard, Sophie, additional, Alcauter, Sarael, additional, Auer, Dorothee P., additional, Barbier, Emmanuel L., additional, Baudewig, Jürgen, additional, Beckmann, Christian F., additional, Beckmann, Nicolau, additional, Becq, Guillaume J. P. C., additional, Blezer, Erwin L. A., additional, Bolbos, Radu, additional, Boretius, Susann, additional, Bouvard, Sandrine, additional, Budinger, Eike, additional, Buxbaum, Joseph D., additional, Cash, Diana, additional, Chapman, Victoria, additional, Chuang, Kai-Hsiang, additional, Ciobanu, Luisa, additional, Coolen, Bram F., additional, Dalley, Jeffrey W., additional, Dhenain, Marc, additional, Dijkhuizen, Rick M., additional, Esteban, Oscar, additional, Faber, Cornelius, additional, Febo, Marcelo, additional, Feindel, Kirk W., additional, Forloni, Gianluigi, additional, Fouquet, Jérémie, additional, Garza-Villarreal, Eduardo A., additional, Gass, Natalia, additional, Glennon, Jeffrey C., additional, Gozzi, Alessandro, additional, Gröhn, Olli, additional, Harkin, Andrew, additional, Heerschap, Arend, additional, Helluy, Xavier, additional, Herfert, Kristina, additional, Heuser, Arnd, additional, Homberg, Judith R., additional, Houwing, Danielle J., additional, Hyder, Fahmeed, additional, Ielacqua, Giovanna Diletta, additional, Jelescu, Ileana O., additional, Johansen-Berg, Heidi, additional, Kaneko, Gen, additional, Kawashima, Ryuta, additional, Keilholz, Shella D., additional, Keliris, Georgios A., additional, Kelly, Clare, additional, Kerskens, Christian, additional, Khokhar, Jibran Y., additional, Kind, Peter C., additional, Langlois, Jean-Baptiste, additional, Lerch, Jason P., additional, López-Hidalgo, Monica A., additional, Manahan-Vaughan, Denise, additional, Marchand, Fabien, additional, Mars, Rogier B., additional, Marsella, Gerardo, additional, Micotti, Edoardo, additional, Muñoz-Moreno, Emma, additional, Near, Jamie, additional, Niendorf, Thoralf, additional, Otte, Willem M., additional, Pais-Roldán, Patricia, additional, Pan, Wen-Ju, additional, Prado-Alcalá, Roberto A., additional, Quirarte, Gina L., additional, Rodger, Jennifer, additional, Rosenow, Tim, additional, Sampaio-Baptista, Cassandra, additional, Sartorius, Alexander, additional, Sawiak, Stephen J., additional, Scheenen, Tom W. J., additional, Shemesh, Noam, additional, Shih, Yen-Yu Ian, additional, Shmuel, Amir, additional, Soria, Guadalupe, additional, Stoop, Ron, additional, Thompson, Garth J., additional, Till, Sally M., additional, Todd, Nick, additional, Van Der Linden, Annemie, additional, van der Toorn, Annette, additional, van Tilborg, Geralda A. F., additional, Vanhove, Christian, additional, Veltien, Andor, additional, Verhoye, Marleen, additional, Wachsmuth, Lydia, additional, Weber-Fahr, Wolfgang, additional, Wenk, Patricia, additional, Yu, Xin, additional, Zerbi, Valerio, additional, Zhang, Nanyin, additional, Zhang, Baogui B., additional, Zimmer, Luc, additional, Devenyi, Gabriel A., additional, Chakravarty, M. Mallar, additional, and Hess, Andreas, additional

Published
2023
Full Text
View/download PDF

34. A framework and resource for global collaboration in non-human primate neuroscience

Author

Leerstoel Smagt, Helmholtz Institute, Experimental Psychology (onderzoeksprogramma PF), Hartig, Renée, Klink, P. Christiaan, Polyakova, Zlata, Dehaqani, Mohammad-Reza A., Bondar, Igor, Merchant, Hugo, Vanduffel, Wim, Roe, Anna Wang, Nambu, Atsushi, Thirumala, M., Shmuel, Amir, Kapoor, Vishal, Gothard, Katalin M., Evrard, Henry C., Basso, Michele A., Petkov, Chris, Mitchell, Anna S., Leerstoel Smagt, Helmholtz Institute, Experimental Psychology (onderzoeksprogramma PF), Hartig, Renée, Klink, P. Christiaan, Polyakova, Zlata, Dehaqani, Mohammad-Reza A., Bondar, Igor, Merchant, Hugo, Vanduffel, Wim, Roe, Anna Wang, Nambu, Atsushi, Thirumala, M., Shmuel, Amir, Kapoor, Vishal, Gothard, Katalin M., Evrard, Henry C., Basso, Michele A., Petkov, Chris, and Mitchell, Anna S.

Published
2023

35. Author Correction: A consensus protocol for functional connectivity analysis in the rat brain (Nature Neuroscience, (2023), 26, 4, (673-681), 10.1038/s41593-023-01286-8)

Author

In Vivo NMR ISI, Trialbureau Beeld, Brain, Circulatory Health, Stroke, Hubrecht Institute with UMC, Projectafdeling KIND, Grandjean, Joanes, Desrosiers-Gregoire, Gabriel, Anckaerts, Cynthia, Angeles-Valdez, Diego, Ayad, Fadi, Barrière, David A., Blockx, Ines, Bortel, Aleksandra, Broadwater, Margaret, Cardoso, Beatriz M., Célestine, Marina, Chavez-Negrete, Jorge E., Choi, Sangcheon, Christiaen, Emma, Clavijo, Perrin, Colon-Perez, Luis, Cramer, Samuel, Daniele, Tolomeo, Dempsey, Elaine, Diao, Yujian, Doelemeyer, Arno, Dopfel, David, Dvořáková, Lenka, Falfán-Melgoza, Claudia, Fernandes, Francisca F., Fowler, Caitlin F., Fuentes-Ibañez, Antonio, Garin, Clément M., Gelderman, Eveline, Golden, Carla E.M., Guo, Chao C.G., Henckens, Marloes J.A.G., Hennessy, Lauren A., Herman, Peter, Hofwijks, Nita, Horien, Corey, Ionescu, Tudor M., Jones, Jolyon, Kaesser, Johannes, Kim, Eugene, Lambers, Henriette, Lazari, Alberto, Lee, Sung Ho, Lillywhite, Amanda, Liu, Yikang, Liu, Yanyan Y., López -Castro, Alejandra, López-Gil, Xavier, Ma, Zilu, MacNicol, Eilidh, Madularu, Dan, Mandino, Francesca, Marciano, Sabina, McAuslan, Matthew J., McCunn, Patrick, McIntosh, Alison, Meng, Xianzong, Meyer-Baese, Lisa, Missault, Stephan, Moro, Federico, Naessens, Daphne M.P., Nava-Gomez, Laura J., Nonaka, Hiroi, Ortiz, Juan J., Paasonen, Jaakko, Peeters, Lore M., Pereira, Mickaël, Perez, Pablo D., Pompilus, Marjory, Prior, Malcolm, Rakhmatullin, Rustam, Reimann, Henning M., Reinwald, Jonathan, Del Rio, Rodrigo Triana, Rivera-Olvera, Alejandro, Ruiz-Pérez, Daniel, Russo, Gabriele, Rutten, Tobias J., Ryoke, Rie, Sack, Markus, Salvan, Piergiorgio, Sanganahalli, Basavaraju G., Schroeter, Aileen, Seewoo, Bhedita J., Selingue, Erwan, Seuwen, Aline, Shi, Bowen, Sirmpilatze, Nikoloz, Smith, Joanna A.B., Smith, Corrie, Sobczak, Filip, Stenroos, Petteri J., Straathof, Milou, Strobelt, Sandra, Sumiyoshi, Akira, Takahashi, Kengo, Torres-García, Maria E., Tudela, Raul, van den Berg, Monica, van der Marel, Kajo, van Hout, Aran T.B., Vertullo, Roberta, Vidal, Benjamin, Vrooman, Roël M., Wang, Victora X., Wank, Isabel, Watson, David J.G., Yin, Ting, Zhang, Yongzhi, Zurbruegg, Stefan, Achard, Sophie, Alcauter, Sarael, Auer, Dorothee P., Barbier, Emmanuel L., Baudewig, Jürgen, Beckmann, Christian F., Beckmann, Nicolau, Becq, Guillaume J.P.C., Blezer, Erwin L.A., Bolbos, Radu, Boretius, Susann, Bouvard, Sandrine, Budinger, Eike, Buxbaum, Joseph D., Cash, Diana, Chapman, Victoria, Chuang, Kai Hsiang, Ciobanu, Luisa, Coolen, Bram F., Dalley, Jeffrey W., Dhenain, Marc, Dijkhuizen, Rick M., Esteban, Oscar, Faber, Cornelius, Febo, Marcelo, Feindel, Kirk W., Forloni, Gianluigi, Fouquet, Jérémie, Garza-Villarreal, Eduardo A., Gass, Natalia, Glennon, Jeffrey C., Gozzi, Alessandro, Gröhn, Olli, Harkin, Andrew, Heerschap, Arend, Helluy, Xavier, Herfert, Kristina, Heuser, Arnd, Homberg, Judith R., Houwing, Danielle J., Hyder, Fahmeed, Ielacqua, Giovanna Diletta, Jelescu, Ileana O., Johansen-Berg, Heidi, Kaneko, Gen, Kawashima, Ryuta, Keilholz, Shella D., Keliris, Georgios A., Kelly, Clare, Kerskens, Christian, Khokhar, Jibran Y., Kind, Peter C., Langlois, Jean Baptiste, Lerch, Jason P., López-Hidalgo, Monica A., Manahan-Vaughan, Denise, Marchand, Fabien, Mars, Rogier B., Marsella, Gerardo, Micotti, Edoardo, Muñoz-Moreno, Emma, Near, Jamie, Niendorf, Thoralf, Otte, Willem M., Pais-Roldán, Patricia, Pan, Wen Ju, Prado-Alcalá, Roberto A., Quirarte, Gina L., Rodger, Jennifer, Rosenow, Tim, Sampaio-Baptista, Cassandra, Sartorius, Alexander, Sawiak, Stephen J., Scheenen, Tom W.J., Shemesh, Noam, Shih, Yen Yu Ian, Shmuel, Amir, Soria, Guadalupe, Stoop, Ron, Thompson, Garth J., Till, Sally M., Todd, Nick, Van Der Linden, Annemie, van der Toorn, Annette, van Tilborg, Geralda A.F., Vanhove, Christian, Veltien, Andor, Verhoye, Marleen, Wachsmuth, Lydia, Weber-Fahr, Wolfgang, Wenk, Patricia, Yu, Xin, Zerbi, Valerio, Zhang, Nanyin, Zhang, Baogui B., Zimmer, Luc, Devenyi, Gabriel A., Chakravarty, M. Mallar, Hess, Andreas, In Vivo NMR ISI, Trialbureau Beeld, Brain, Circulatory Health, Stroke, Hubrecht Institute with UMC, Projectafdeling KIND, Grandjean, Joanes, Desrosiers-Gregoire, Gabriel, Anckaerts, Cynthia, Angeles-Valdez, Diego, Ayad, Fadi, Barrière, David A., Blockx, Ines, Bortel, Aleksandra, Broadwater, Margaret, Cardoso, Beatriz M., Célestine, Marina, Chavez-Negrete, Jorge E., Choi, Sangcheon, Christiaen, Emma, Clavijo, Perrin, Colon-Perez, Luis, Cramer, Samuel, Daniele, Tolomeo, Dempsey, Elaine, Diao, Yujian, Doelemeyer, Arno, Dopfel, David, Dvořáková, Lenka, Falfán-Melgoza, Claudia, Fernandes, Francisca F., Fowler, Caitlin F., Fuentes-Ibañez, Antonio, Garin, Clément M., Gelderman, Eveline, Golden, Carla E.M., Guo, Chao C.G., Henckens, Marloes J.A.G., Hennessy, Lauren A., Herman, Peter, Hofwijks, Nita, Horien, Corey, Ionescu, Tudor M., Jones, Jolyon, Kaesser, Johannes, Kim, Eugene, Lambers, Henriette, Lazari, Alberto, Lee, Sung Ho, Lillywhite, Amanda, Liu, Yikang, Liu, Yanyan Y., López -Castro, Alejandra, López-Gil, Xavier, Ma, Zilu, MacNicol, Eilidh, Madularu, Dan, Mandino, Francesca, Marciano, Sabina, McAuslan, Matthew J., McCunn, Patrick, McIntosh, Alison, Meng, Xianzong, Meyer-Baese, Lisa, Missault, Stephan, Moro, Federico, Naessens, Daphne M.P., Nava-Gomez, Laura J., Nonaka, Hiroi, Ortiz, Juan J., Paasonen, Jaakko, Peeters, Lore M., Pereira, Mickaël, Perez, Pablo D., Pompilus, Marjory, Prior, Malcolm, Rakhmatullin, Rustam, Reimann, Henning M., Reinwald, Jonathan, Del Rio, Rodrigo Triana, Rivera-Olvera, Alejandro, Ruiz-Pérez, Daniel, Russo, Gabriele, Rutten, Tobias J., Ryoke, Rie, Sack, Markus, Salvan, Piergiorgio, Sanganahalli, Basavaraju G., Schroeter, Aileen, Seewoo, Bhedita J., Selingue, Erwan, Seuwen, Aline, Shi, Bowen, Sirmpilatze, Nikoloz, Smith, Joanna A.B., Smith, Corrie, Sobczak, Filip, Stenroos, Petteri J., Straathof, Milou, Strobelt, Sandra, Sumiyoshi, Akira, Takahashi, Kengo, Torres-García, Maria E., Tudela, Raul, van den Berg, Monica, van der Marel, Kajo, van Hout, Aran T.B., Vertullo, Roberta, Vidal, Benjamin, Vrooman, Roël M., Wang, Victora X., Wank, Isabel, Watson, David J.G., Yin, Ting, Zhang, Yongzhi, Zurbruegg, Stefan, Achard, Sophie, Alcauter, Sarael, Auer, Dorothee P., Barbier, Emmanuel L., Baudewig, Jürgen, Beckmann, Christian F., Beckmann, Nicolau, Becq, Guillaume J.P.C., Blezer, Erwin L.A., Bolbos, Radu, Boretius, Susann, Bouvard, Sandrine, Budinger, Eike, Buxbaum, Joseph D., Cash, Diana, Chapman, Victoria, Chuang, Kai Hsiang, Ciobanu, Luisa, Coolen, Bram F., Dalley, Jeffrey W., Dhenain, Marc, Dijkhuizen, Rick M., Esteban, Oscar, Faber, Cornelius, Febo, Marcelo, Feindel, Kirk W., Forloni, Gianluigi, Fouquet, Jérémie, Garza-Villarreal, Eduardo A., Gass, Natalia, Glennon, Jeffrey C., Gozzi, Alessandro, Gröhn, Olli, Harkin, Andrew, Heerschap, Arend, Helluy, Xavier, Herfert, Kristina, Heuser, Arnd, Homberg, Judith R., Houwing, Danielle J., Hyder, Fahmeed, Ielacqua, Giovanna Diletta, Jelescu, Ileana O., Johansen-Berg, Heidi, Kaneko, Gen, Kawashima, Ryuta, Keilholz, Shella D., Keliris, Georgios A., Kelly, Clare, Kerskens, Christian, Khokhar, Jibran Y., Kind, Peter C., Langlois, Jean Baptiste, Lerch, Jason P., López-Hidalgo, Monica A., Manahan-Vaughan, Denise, Marchand, Fabien, Mars, Rogier B., Marsella, Gerardo, Micotti, Edoardo, Muñoz-Moreno, Emma, Near, Jamie, Niendorf, Thoralf, Otte, Willem M., Pais-Roldán, Patricia, Pan, Wen Ju, Prado-Alcalá, Roberto A., Quirarte, Gina L., Rodger, Jennifer, Rosenow, Tim, Sampaio-Baptista, Cassandra, Sartorius, Alexander, Sawiak, Stephen J., Scheenen, Tom W.J., Shemesh, Noam, Shih, Yen Yu Ian, Shmuel, Amir, Soria, Guadalupe, Stoop, Ron, Thompson, Garth J., Till, Sally M., Todd, Nick, Van Der Linden, Annemie, van der Toorn, Annette, van Tilborg, Geralda A.F., Vanhove, Christian, Veltien, Andor, Verhoye, Marleen, Wachsmuth, Lydia, Weber-Fahr, Wolfgang, Wenk, Patricia, Yu, Xin, Zerbi, Valerio, Zhang, Nanyin, Zhang, Baogui B., Zimmer, Luc, Devenyi, Gabriel A., Chakravarty, M. Mallar, and Hess, Andreas

Published
2023

38. Application of pseudocontinuous arterial spin labeling perfusion imaging in children with autism spectrum disorders

Author

Ye, Fang, primary, Du, Lei, additional, Liu, Bing, additional, Gao, Xinying, additional, Yang, Aocai, additional, Liu, Die, additional, Chen, Yue, additional, Lv, Kuan, additional, Xu, Pengfei, additional, Chen, Yuanmei, additional, Liu, Jing, additional, Zhang, Lipeng, additional, Li, Shijun, additional, Shmuel, Amir, additional, Zhang, Qi, additional, and Ma, Guolin, additional

Published
2022
Full Text
View/download PDF

41. versaFlow: a versatile pipeline for resolution adapted diffusion MRI processing and its application to studying the variability of the PRIME-DE database.

Author

Caron, Alex Valcourt, Shmuel, Amir, Hao, Ziqi, and Descoteaux, Maxime

Subjects
DIFFUSION magnetic resonance imaging, MAGNETIC resonance imaging, DATABASES, DIFFUSION tensor imaging, FUNCTIONAL magnetic resonance imaging, GAMMA distributions, OPTICAL scanners
Abstract

The lack of “gold standards” in Diffusion Weighted Imaging (DWI) makes validation cumbersome. To tackle this task, studies use translational analysis where results in humans are benchmarked against findings in other species. Non-Human Primates (NHP) are particularly interesting for this, as their cytoarchitecture is closely related to humans. However, tools used for processing and analysis must be adapted and finely tuned to work well on NHP images. Here, we propose versaFlow, a modular pipeline implemented in Nextflow, designed for robustness and scalability. The pipeline is tailored to in vivo NHP DWI at any spatial resolution; it allows for maintainability and customization. Processes and workflows are implemented using cutting-edge and state-of-the-art Magnetic Resonance Imaging (MRI) processing technologies and diffusion modeling algorithms, namely Diffusion Tensor Imaging (DTI), Constrained Spherical Deconvolution (CSD), and DIstribution of Anisotropic MicrOstructural eNvironments in Diffusion- compartment imaging (DIAMOND). Using versaFlow, we provide an in-depth study of the variability of diffusion metrics computed on 32 subjects from 3 sites of the Primate Data Exchange (PRIME-DE), which contains anatomical T1-weighted (T1w) and T2-weighted (T2w) images, functional MRI (fMRI), and DWI of NHP brains. This dataset includes images acquired over a range of resolutions, using single and multi-shell gradient samplings, on multiple scanner vendors. We perform a reproducibility study of the processing of versaFlow using the Aix-Marseilles site’s data, to ensure that our implementation has minimal impact on the variability observed in subsequent analyses. We report very high reproducibility for the majority of metrics; only gamma distribution parameters of DIAMOND display less reproducible behaviors, due to the absence of a mechanism to enforce a random number seed in the software we used. This should be taken into consideration when future applications are performed. We show that the PRIME- DE diffusion data exhibits a great level of variability, similar or greater than results obtained in human studies. Its usage should be done carefully to prevent instilling uncertainty in statistical analyses. This hints at a need for sufficient harmonization in acquisition protocols and for the development of robust algorithms capable of managing the variability induced in imaging due to differences in scanner models and/or vendors. [ABSTRACT FROM AUTHOR]

Published
2023
Full Text
View/download PDF

42. Cap-independent translation and a precisely located RNA sequence enable SARS-CoV-2 to control host translation and escape anti-viral response

Author

Slobodin, Boris, primary, Sehrawat, Urmila, additional, Lev, Anastasia, additional, Hayat, Daniel, additional, Zuckerman, Binyamin, additional, Fraticelli, Davide, additional, Ogran, Ariel, additional, Ben-Shmuel, Amir, additional, Bar-David, Elad, additional, Levy, Haim, additional, Ulitsky, Igor, additional, and Dikstein, Rivka, additional

Published
2022
Full Text
View/download PDF

43. SARS-CoV-2 infects the human kidney and drives fibrosis in kidney organoids

Author

Jansen, Jitske, Reimer, Katharina C., Nagai, James S., Varghese, Finny S., Overheul, Gijs J., de Beer, Marit, Roverts, Rona, Daviran, Deniz, Fermin, Liline A.S., Willemsen, Brigith, Beukenboom, Marcel, Djudjaj, Sonja, von Stillfried, Saskia, van Eijk, Larissa E., Mastik, Mirjam, Bulthuis, Marian, Dunnen, Wilfred den, van Goor, Harry, Hillebrands, Jan Luuk, Triana, Sergio H., Alexandrov, Theodore, Timm, Marie Cherelle, van den Berge, Bartholomeus T., van den Broek, Martijn, Nlandu, Quincy, Heijnert, Joelle, Bindels, Eric M.J., Hoogenboezem, Remco M., Mooren, Fieke, Kuppe, Christoph, Miesen, Pascal, Grünberg, Katrien, Ijzermans, Ties, Steenbergen, Eric J., Czogalla, Jan, Schreuder, Michiel F., Sommerdijk, Nico, Akiva, Anat, Boor, Peter, Puelles, Victor G., Floege, Jürgen, Huber, Tobias B., Achdout, Hagit, Aimon, Anthony, Bar-David, Elad, Barr, Haim, Ben-Shmuel, Amir, Bennett, James, Schneider, Rebekka K., Kramann, Rafael, Jansen, Jitske, Reimer, Katharina C., Nagai, James S., Varghese, Finny S., Overheul, Gijs J., de Beer, Marit, Roverts, Rona, Daviran, Deniz, Fermin, Liline A.S., Willemsen, Brigith, Beukenboom, Marcel, Djudjaj, Sonja, von Stillfried, Saskia, van Eijk, Larissa E., Mastik, Mirjam, Bulthuis, Marian, Dunnen, Wilfred den, van Goor, Harry, Hillebrands, Jan Luuk, Triana, Sergio H., Alexandrov, Theodore, Timm, Marie Cherelle, van den Berge, Bartholomeus T., van den Broek, Martijn, Nlandu, Quincy, Heijnert, Joelle, Bindels, Eric M.J., Hoogenboezem, Remco M., Mooren, Fieke, Kuppe, Christoph, Miesen, Pascal, Grünberg, Katrien, Ijzermans, Ties, Steenbergen, Eric J., Czogalla, Jan, Schreuder, Michiel F., Sommerdijk, Nico, Akiva, Anat, Boor, Peter, Puelles, Victor G., Floege, Jürgen, Huber, Tobias B., Achdout, Hagit, Aimon, Anthony, Bar-David, Elad, Barr, Haim, Ben-Shmuel, Amir, Bennett, James, Schneider, Rebekka K., and Kramann, Rafael

Abstract

Kidney failure is frequently observed during and after COVID-19, but it remains elusive whether this is a direct effect of the virus. Here, we report that SARS-CoV-2 directly infects kidney cells and is associated with increased tubule-interstitial kidney fibrosis in patient autopsy samples. To study direct effects of the virus on the kidney independent of systemic effects of COVID-19, we infected human-induced pluripotent stem-cell-derived kidney organoids with SARS-CoV-2. Single-cell RNA sequencing indicated injury and dedifferentiation of infected cells with activation of profibrotic signaling pathways. Importantly, SARS-CoV-2 infection also led to increased collagen 1 protein expression in organoids. A SARS-CoV-2 protease inhibitor was able to ameliorate the infection of kidney cells by SARS-CoV-2. Our results suggest that SARS-CoV-2 can directly infect kidney cells and induce cell injury with subsequent fibrosis. These data could explain both acute kidney injury in COVID-19 patients and the development of chronic kidney disease in long COVID.

Published
2022

44. Turning high-throughput structural biology into predictive inhibitor design.

Author

Saar, Kadi L., McCorkindale, William, Fearon, Daren, Boby, Melissa, Barr, Haim, Ben-Shmuel, Amir, London, Nir, von Delft, Frank, Chodera, John D., and Lee, Alpha A.

Subjects
COSMOCHEMISTRY, DRUG design, BIOLOGY, SIMPLE machines, MACHINE learning, EXCHANGE
Abstract

A common challenge in drug design pertains to finding chemical modifications to a ligand that increases its affinity to the target protein. An underutilized advance is the increase in structural biology throughput, which has progressed from an artisanal endeavor to a monthly throughput of hundreds of different ligands against a protein in modern synchrotrons. However, the missing piece is a framework that turns high-throughput crystallography data into predictive models for ligand design. Here, we designed a simple machine learning approach that predicts protein-ligand affinity from experimental structures of diverse ligands against a single protein paired with biochemical measurements. Our key insight is using physics-based energy descriptors to represent protein-ligand complexes and a learning-to-rank approach that infers the relevant differences between binding modes. We ran a high-throughput crystallography campaign against the SARS-CoV-2 main protease (MPro), obtaining parallel measurements of over 200 protein-ligand complexes and their binding activities. This allows us to design one-step library syntheses which improved the potency of two distinct micromolar hits by over 10-fold, arriving at a noncovalent and nonpeptidomimetic inhibitor with 120 nM antiviral efficacy. Crucially, our approach successfully extends ligands to unexplored regions of the binding pocket, executing large and fruitful moves in chemical space with simple chemistry. [ABSTRACT FROM AUTHOR]

Published
2023
Full Text
View/download PDF

46. StandardRat: A multi-center consensus protocol to enhance functional connectivity specificity in the rat brain

Author

Grandjean, Joanes, primary, Desrosiers-Gregoire, Gabriel, additional, Anckaerts, Cynthia, additional, Angeles-Valdez, Diego, additional, Ayad, Fadi, additional, Barrière, David A, additional, Blockx, Ines, additional, Bortel, Aleksandra B, additional, Broadwater, Margaret, additional, Cardoso, Beatriz M, additional, Célestine, Marina, additional, Chavez-Negrete, Jorge E, additional, Choi, Sangcheon, additional, Christiaen, Emma, additional, Clavijo, Perrin, additional, Colon-Perez, Luis, additional, Cramer, Samuel, additional, Daniele, Tolomeo, additional, Dempsey, Elaine, additional, Diao, Yujian, additional, Doelemeyer, Arno, additional, Dopfel, David, additional, Dvořáková, Lenka, additional, Falfán-Melgoza, Claudia, additional, Fernandes, Francisca F, additional, Fowler, Caitlin F, additional, Fuentes-Ibañez, Antonio, additional, Garin, Clément, additional, Gelderman, Eveline, additional, Golden, Carla EM, additional, Guo, Chao CG, additional, Henckens, Marloes JAG, additional, Hennessy, Lauren A, additional, Herman, Peter, additional, Hofwijks, Nita, additional, Horien, Corey, additional, Ionescu, Tudor M, additional, Jones, Jolyon, additional, Kaesser, Johannes, additional, Kim, Eugene, additional, Lambers, Henriette, additional, Lazari, Alberto, additional, Lee, Sung-Ho, additional, Lillywhite, Amanda, additional, Liu, Yikang, additional, Liu, Yanyan Y, additional, López-Castro, Alejandra, additional, López-Gil, Xavier, additional, Ma, Zilu, additional, MacNicol, Eilidh, additional, Madularu, Dan, additional, Mandino, Francesca, additional, Marciano, Sabina, additional, McAuslan, Matthew J, additional, McCunn, Patrick, additional, McIntosh, Alison, additional, Meng, Xianzong, additional, Meyer-Baese, Lisa, additional, Missault, Stephan, additional, Moro, Federico, additional, Naessens, Daphne, additional, Nava-Gomez, Laura J, additional, Nonaka, Hiroi, additional, Ortiz, Juan J, additional, Paasonen, Jaakko, additional, Peeters, Lore M, additional, Pereira, Mickaël, additional, Perez, Pablo D, additional, Pompilus, Marjory, additional, Prior, Malcolm, additional, Rakhmatullin, Rustam, additional, Reimann, Henning M, additional, Reinwald, Jonathan, additional, de Rio, Rodrigo Triana, additional, Rivera-Olvera, Alejandro, additional, Ruiz-Pérez, Daniel, additional, Russo, Gabriele, additional, Rutten, Tobias J, additional, Ryoke, Rie, additional, Sack, Markus, additional, Salvan, Piergiorgio, additional, Sanganahalli, Basavaraju G, additional, Schroeter, Aileen, additional, Seewoo, Bhedita J, additional, Selingue, Erwan, additional, Seuwen, Aline, additional, Shi, Bowen, additional, Sirmpilatze, Nikoloz, additional, Smith, Joanna AB, additional, Smith, Corrie, additional, Sobczak, Filip, additional, Stenroos, Petteri J, additional, Straathof, Milou, additional, Strobelt, Sandra, additional, Sumiyoshi, Akira, additional, Takahashi, Kengo, additional, Torres-García, Maria E, additional, Tudela, Raul, additional, van den Berg, Monica, additional, van der Marel, Kajo, additional, van Hout, Aran TB, additional, Vertullo, Roberta, additional, Vidal, Benjamin, additional, Vrooman, Roel M, additional, Wang, Victora X, additional, Wank, Isabel, additional, Watson, David JG, additional, Yin, Ting, additional, Zhang, Yongzhi, additional, Zurbruegg, Stefan, additional, Achard, Sophie, additional, Alcauter, Sarael, additional, Auer, Dorothee P, additional, Barbier, Emmanuel L, additional, Baudewig, Jürgen, additional, Beckmann, Christian F, additional, Beckmann, Nicolau, additional, Becq, Guillaume JPC, additional, Blezer, Erwin LA, additional, Bolbos, Radu, additional, Boretius, Susann, additional, Bouvard, Sandrine, additional, Budinger, Eike, additional, Buxbaum, Joseph D, additional, Cash, Diana, additional, Chapman, Victoria, additional, Chuang, Kai-Hsiang, additional, Ciobanu, Luisa, additional, Coolen, Bram, additional, Dalley, Jeffrey W, additional, Dhenain, Marc, additional, Dijkhuizen, Rick M, additional, Esteban, Oscar, additional, Faber, Cornelius, additional, Febo, Marcelo, additional, Feindel, Kirk W, additional, Forloni, Gianluigi, additional, Fouquet, Jérémie, additional, Garza-Villarreal, Eduardo A, additional, Gass, Natalia, additional, Glennon, Jeffrey C, additional, Gozzi, Alessandro, additional, Gröhn, Olli, additional, Harkin, Andrew, additional, Heerschap, Arend, additional, Helluy, Xavier, additional, Herfert, Kristina, additional, Heuser, Arnd, additional, Homberg, Judith R, additional, Houwing, Danielle J, additional, Hyder, Fahmeed, additional, Ielacqua, Giovanna Diletta, additional, Jelescu, Ileana O, additional, Johansen-Berg, Heidi, additional, Kaneko, Gen, additional, Kawashima, Ryuta, additional, Keilholz, Shella D, additional, Keliris, Georgios A, additional, Kelly, Clare, additional, Kerskens, Christian, additional, Khokhar, Jibran Y, additional, Kind, Peter C, additional, Langlois, Jean-Baptiste, additional, Lerch, Jason P, additional, López-Hidalgo, Monica A, additional, Manahan-Vaughan, Denise, additional, Marchand, Fabien, additional, Mars, Rogier B, additional, Marsella, Gerardo, additional, Micotti, Edoardo, additional, Muñoz-Moreno, Emma, additional, Near, Jamie, additional, Niendorf, Thoralf, additional, Otte, Willem M, additional, Pais, Patricia, additional, Pan, Wen-Ju, additional, Prado-Alcalá, Roberto A, additional, Quirarte, Gina L, additional, Rodger, Jennifer, additional, Rosenow, Tim, additional, Baptista, Cassandra Sampaio, additional, Sartorius, Alexander, additional, Sawiak, Stephen J, additional, Scheenen, Tom WJ, additional, Shemesh, Noam, additional, Shih, Yen-Yu Ian, additional, Shmuel, Amir, additional, Soria, Guadalupe, additional, Stoop, Ron, additional, Thompson, Garth J, additional, Till, Sally M, additional, Todd, Nick, additional, Van Der Linden, Annemie, additional, van der Toorn, Annette, additional, van Tilborg, Geralda AF, additional, Vanhove, Christian, additional, Veltien, Andor, additional, Verhoye, Marleen, additional, Wachsmuth, Lydia, additional, Weber-Fahr, Wolfgang, additional, Wenk, Patricia, additional, Yu, Xin, additional, Zerbi, Valerio, additional, Zhang, Nanyin, additional, Zhang, Baogui B, additional, Zimmer, Luc, additional, Devenyi, Gabriel A, additional, Chakravarty, M Mallar, additional, and Hess, Andreas, additional

Published
2022
Full Text
View/download PDF

49. Toward next-generation primate neuroscience: A collaboration-based strategic plan for integrative neuroimaging

Author

Milham, Michael, primary, Petkov, Chris, additional, Belin, Pascal, additional, Ben Hamed, Suliann, additional, Evrard, Henry, additional, Fair, Damien, additional, Fox, Andrew, additional, Froudist-Walsh, Sean, additional, Hayashi, Takuya, additional, Kastner, Sabine, additional, Klink, Chris, additional, Majka, Piotr, additional, Mars, Rogier, additional, Messinger, Adam, additional, Poirier, Colline, additional, Schroeder, Charles, additional, Shmuel, Amir, additional, Silva, Afonso C., additional, Vanduffel, Wim, additional, Van Essen, David C., additional, Wang, Zheng, additional, Roe, Anna Wang, additional, Wilke, Melanie, additional, Xu, Ting, additional, Aarabi, Mohammad Hadi, additional, Adolphs, Ralph, additional, Ahuja, Aarit, additional, Alvand, Ashkan, additional, Amiez, Celine, additional, Autio, Joonas, additional, Azadi, Reza, additional, Baeg, Eunha, additional, Bai, Ruiliang, additional, Bao, Pinglei, additional, Basso, Michele, additional, Behel, Austin K., additional, Bennett, Yvonne, additional, Bernhardt, Boris, additional, Biswal, Bharat, additional, Boopathy, Sethu, additional, Boretius, Susann, additional, Borra, Elena, additional, Boshra, Rober, additional, Buffalo, Elizabeth, additional, Cao, Long, additional, Cavanaugh, James, additional, Celine, Amiez, additional, Chavez, Gianfranco, additional, Chen, Li Min, additional, Chen, Xiaodong, additional, Cheng, Luqi, additional, Chouinard-Decorte, Francois, additional, Clavagnier, Simon, additional, Cléry, Justine, additional, Colcombe, Stan J., additional, Conway, Bevil, additional, Cordeau, Melina, additional, Coulon, Olivier, additional, Cui, Yue, additional, Dadarwal, Rakshit, additional, Dahnke, Robert, additional, Desrochers, Theresa, additional, Deying, Li, additional, Dougherty, Kacie, additional, Doyle, Hannah, additional, Drzewiecki, Carly M., additional, Duyck, Marianne, additional, Arachchi, Wasana Ediri, additional, Elorette, Catherine, additional, Essamlali, Abdelhadi, additional, Evans, Alan, additional, Fajardo, Alfonso, additional, Figueroa, Hector, additional, Franco, Alexandre, additional, Freches, Guilherme, additional, Frey, Steve, additional, Friedrich, Patrick, additional, Fujimoto, Atsushi, additional, Fukunaga, Masaki, additional, Gacoin, Maeva, additional, Gallardo, Guillermo, additional, Gao, Lixia, additional, Gao, Yang, additional, Garside, Danny, additional, Garza-Villarreal, Eduardo A., additional, Gaudet-Trafit, Maxime, additional, Gerbella, Marzio, additional, Giavasis, Steven, additional, Glen, Daniel, additional, Ribeiro Gomes, Ana Rita, additional, Torrecilla, Sandra Gonzalez, additional, Gozzi, Alessandro, additional, Gulli, Roberto, additional, Haber, Suzanne, additional, Hadj-Bouziane, Fadila, additional, Fujimoto, Satoka Hashimoto, additional, Hawrylycz, Michael, additional, He, Quansheng, additional, He, Ye, additional, Heuer, Katja, additional, Hiba, Bassem, additional, Hoffstaedter, Felix, additional, Hong, Seok-Jun, additional, Hori, Yuki, additional, Hou, Yujie, additional, Howard, Amy, additional, de la Iglesia-Vaya, Maria, additional, Ikeda, Takuro, additional, Jankovic-Rapan, Lucija, additional, Jaramillo, Jorge, additional, Jedema, Hank P., additional, Jin, Hecheng, additional, Jiang, Minqing, additional, Jung, Benjamin, additional, Kagan, Igor, additional, Kahn, Itamar, additional, Kiar, Gregory, additional, Kikuchi, Yuki, additional, Kilavik, Bjørg, additional, Kimura, Nobuyuki, additional, Klatzmann, Ulysse, additional, Kwok, Sze Chai, additional, Lai, Hsin-Yi, additional, Lamberton, Franck, additional, Lehman, Julia, additional, Li, Pengcheng, additional, Li, Xinhui, additional, Li, Xinjian, additional, Liang, Zhifeng, additional, Liston, Conor, additional, Little, Roger, additional, Liu, Cirong, additional, Liu, Ning, additional, Liu, Xiaojin, additional, Liu, Xinyu, additional, Lu, Haidong, additional, Loh, Kep Kee, additional, Madan, Christopher, additional, Magrou, Loïc, additional, Margulies, Daniel, additional, Mathilda, Froesel, additional, Mejia, Sheyla, additional, Meng, Yao, additional, Menon, Ravi, additional, Meunier, David, additional, Mitchell, A.J., additional, Mitchell, Anna, additional, Murphy, Aidan, additional, Mvula, Towela, additional, Ortiz-Rios, Michael, additional, Ortuzar Martinez, Diego Emanuel, additional, Pagani, Marco, additional, Palomero-Gallagher, Nicola, additional, Pareek, Vikas, additional, Perkins, Pierce, additional, Ponce, Fernanda, additional, Postans, Mark, additional, Pouget, Pierre, additional, Qian, Meizhen, additional, Ramirez, Julian “Bene”, additional, Raven, Erika, additional, Restrepo, Isabel, additional, Rima, Samy, additional, Rockland, Kathleen, additional, Rodriguez, Nadira Yusif, additional, Roger, Elise, additional, Hortelano, Eduardo Rojas, additional, Rosa, Marcello, additional, Rossi, Andrew, additional, Rudebeck, Peter, additional, Russ, Brian, additional, Sakai, Tomoko, additional, Saleem, Kadharbatcha S., additional, Sallet, Jerome, additional, Sawiak, Stephen, additional, Schaeffer, David, additional, Schwiedrzik, Caspar M., additional, Seidlitz, Jakob, additional, Sein, Julien, additional, Sharma, Jitendra, additional, Shen, Kelly, additional, Sheng, Wei-an, additional, Shi, Neo Sunhang, additional, Shim, Won Mok, additional, Simone, Luciano, additional, Sirmpilatze, Nikoloz, additional, Sivan, Virginie, additional, Song, Xiaowei, additional, Tanenbaum, Aaron, additional, Tasserie, Jordy, additional, Taylor, Paul, additional, Tian, Xiaoguang, additional, Toro, Roberto, additional, Trambaiolli, Lucas, additional, Upright, Nick, additional, Vezoli, Julien, additional, Vickery, Sam, additional, Villalon, Julio, additional, Wang, Xiaojie, additional, Wang, Yufan, additional, Weiss, Alison R., additional, Wilson, Charlie, additional, Wong, Ting-Yat, additional, Woo, Choong-Wan, additional, Wu, Bichan, additional, Xiao, Du, additional, Xu, Augix Guohua, additional, Xu, Dongrong, additional, Xufeng, Zhou, additional, Yacoub, Essa, additional, Ye, Ningrong, additional, Ying, Zhang, additional, Yokoyama, Chihiro, additional, Yu, Xiongjie, additional, Yue, Shasha, additional, Yuheng, Lu, additional, Yumeng, Xin, additional, Zaldivar, Daniel, additional, Zhang, Shaomin, additional, Zhao, Yuguang, additional, and Zuo, Zhanguang, additional

Published
2022
Full Text
View/download PDF

Catalog

Books, media, physical & digital resources
See catalog results