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Understanding recruitment of glass eels in estuaries is crucial for the conservation of the European eel (Anguilla anguilla). However, basic knowledge on estuarine-specific glass eel migration, including in estuarine harbours, is mostly lacking. Therefore, we studied glass eel migration in the Dutch–German Ems estuary and the harbour at Delfzijl (The Netherlands) and tagged glass eels with Visual Implant Elastomer tags (VIE tags). We released 2000 tagged glass eels into the Ems estuary itself and 1000 tagged glass eels into the tidal harbour at Delfzijl. At three estuarine locations, i.e., Delfzijl–Duurswold, Termunterzijl, and Nieuwe Statenzijl, glass eel collectors were strategically placed, each location being progressively situated further upstream in the Ems estuary. Most glass eels (nuntagged = 97,089, ntagged = 74) were caught at Nieuwe Statenzijl, although this location is much further upstream. Lower numbers of glass eels (nuntagged = 1856, n tagged = 31) were caught at Delfzijl–Duurswold and Termunterzijl (nuntagged = 1192, ntagged = 7). Glass eels arrived approximately a week earlier at Nieuwe Statenzijl than at the other two locations, and the migration speed of tagged glass eels was highest at Nieuwe Statenzijl (>2 km/day) and lower (<1 km/day) at Delfzijl–Duurswold. Our study highlights that migration and the resulting potential recruitment of glass eels in estuaries and harbours may vary considerably both spatially and temporally. Further research on estuarine-specific factors that influence glass eel migration, such as the (anthropogenically altered) tidal action and flow, will provide valuable information on what influences glass eel migration in estuaries.

Tidal sluices are a frequent element in the tidal regions of Europe's rivers and may hinder downstream migrating European eels Anguilla anguilla. Sea level rise will reduce the possibility for tidal sluices to freely discharge water, further compressing windows of opportunity for the passage of eels. Understanding how eels utilize the discharge events of tidal sluices and which conditions facilitate successful passage is pivotal for the design of effective fish migration measures. To investigate eel migration at a tidal sluice, acoustic receivers were placed at the tidal sluice Nieuwe Statenzijl and in its tributary of the Westerwoldse Aa, the Netherlands. Of the 30 tagged eels, 26 eels reached the tidal sluice and passage success was 100%. The mean migration speed of eels in the unobstructed part of the tributary was slow (0.14 m s−1). The eels were delayed in their migration by the sluice and delay was right-skewed distributed with most eels showing moderate delays (<2 days), while about 10% of the tagged individuals experienced extensive delays of more than 3 weeks. The number of missed sluicing events prior to successful passage was influenced by biological characteristics such as migration speed in the tributary, weight and condition. In addition, sluicing events with rapidly increasing and high maximum discharge levels increased the success rate of an individual eel to pass the sluice. Compromising sluicing duration in favour of higher and faster increasing discharge could facilitate eel migration at tidal barriers and contribute to the recovery of this endangered species.