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29 results on '"Russell, David J."'

1. Globally invariant metabolism but density-diversity mismatch in springtails

Author

Potapov, Anton M., Guerra, Carlos A., van den Hoogen, Johan, Babenko, Anatoly, Bellini, Bruno C., Berg, Matty P., Chown, Steven L., Deharveng, Louis, Kováč, Ľubomír, Kuznetsova, Natalia A., Ponge, Jean-François, Potapov, Mikhail B., Russell, David J., Alexandre, Douglas, Alatalo, Juha M., Arbea, Javier I., Bandyopadhyaya, Ipsa, Bernava, Verónica, Bokhorst, Stef, Bolger, Thomas, Castaño-Meneses, Gabriela, Chauvat, Matthieu, Chen, Ting-Wen, Chomel, Mathilde, Classen, Aimee T., Cortet, Jerome, Čuchta, Peter, Manuela de la Pedrosa, Ana, Ferreira, Susana S. D., Fiera, Cristina, Filser, Juliane, Franken, Oscar, Fujii, Saori, Koudji, Essivi Gagnon, Gao, Meixiang, Gendreau-Berthiaume, Benoit, Gomez-Pamies, Diego F., Greve, Michelle, Tanya Handa, I., Heiniger, Charlène, Holmstrup, Martin, Homet, Pablo, Ivask, Mari, Janion-Scheepers, Charlene, Jochum, Malte, Joimel, Sophie, Claudia S. Jorge, Bruna, Jucevica, Edite, Ferlian, Olga, Iuñes de Oliveira Filho, Luís Carlos, Klauberg-Filho, Osmar, Baretta, Dilmar, Krab, Eveline J., Kuu, Annely, de Lima, Estevam C. A., Lin, Dunmei, Lindo, Zoe, Liu, Amy, Lu, Jing-Zhong, Luciañez, María José, Marx, Michael T., McCary, Matthew A., Minor, Maria A., Nakamori, Taizo, Negri, Ilaria, Ochoa-Hueso, Raúl, Palacios-Vargas, José G., Pollierer, Melanie M., Querner, Pascal, Raschmanová, Natália, Rashid, Muhammad Imtiaz, Raymond-Léonard, Laura J., Rousseau, Laurent, Saifutdinov, Ruslan A., Salmon, Sandrine, Sayer, Emma J., Scheunemann, Nicole, Scholz, Cornelia, Seeber, Julia, Shveenkova, Yulia B., Stebaeva, Sophya K., Sterzynska, Maria, Sun, Xin, Susanti, Winda I., Taskaeva, Anastasia A., Thakur, Madhav P., Tsiafouli, Maria A., Turnbull, Matthew S., Twala, Mthokozisi N., Uvarov, Alexei V., Venier, Lisa A., Widenfalk, Lina A., Winck, Bruna R., Winkler, Daniel, Wu, Donghui, Xie, Zhijing, Yin, Rui, Zeppelini, Douglas, Crowther, Thomas W., Eisenhauer, Nico, and Scheu, Stefan

Published
2023
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5. Global fine-resolution data on springtail abundance and community structure

Author

Potapov, Anton M., Chen, Ting-Wen, Striuchkova, Anastasia V., Alatalo, Juha M., Alexandre, Douglas, Arbea, Javier, Ashton, Thomas, Ashwood, Frank, Babenko, Anatoly B., Bandyopadhyaya, Ipsa, Baretta, Carolina Riviera Duarte Maluche, Baretta, Dilmar, Barnes, Andrew D., Bellini, Bruno C., Bendjaballah, Mohamed, Berg, Matty P., Bernava, Verónica, Bokhorst, Stef, Bokova, Anna I., Bolger, Thomas, Bouchard, Mathieu, Brito, Roniere A., Buchori, Damayanti, Castaño-Meneses, Gabriela, Chauvat, Matthieu, Chomel, Mathilde, Chow, Yasuko, Chown, Steven L., Classen, Aimee T., Cortet, Jérôme, Čuchta, Peter, de la Pedrosa, Ana Manuela, De Lima, Estevam C. A., Deharveng, Louis E., Doblas Miranda, Enrique, Drescher, Jochen, Eisenhauer, Nico, Ellers, Jacintha, Ferlian, Olga, Ferreira, Susana S. D., Ferreira, Aila S., Fiera, Cristina, Filser, Juliane, Franken, Oscar, Fujii, Saori, Koudji, Essivi Gagnon, Gao, Meixiang, Gendreau-Berthiaume, Benoit, Gers, Charles, Greve, Michelle, Hamra-Kroua, Salah, Handa, I. Tanya, Hasegawa, Motohiro, Heiniger, Charlène, Hishi, Takuo, Holmstrup, Martin, Homet, Pablo, Høye, Toke T., Ivask, Mari, Jacques, Bob, Janion-Scheepers, Charlene, Jochum, Malte, Joimel, Sophie, Jorge, Bruna Claudia S., Juceviča, Edite, Kapinga, Esther M., Kováč, Ľubomír, Krab, Eveline J, Krogh, Paul Henning, Kuu, Annely, Kuznetsova, Natalya, Lam, Weng Ngai, Lin, Dunmei, Lindo, Zoë, Liu, Amy W. P., Lu, Jing-Zhong, Luciáñez, María José, Marx, Michael T., Mawan, Amanda, McCary, Matthew A., Minor, Maria A., Mitchell, Grace I., Moreno, David, Nakamori, Taizo, Negri, Ilaria, Nielsen, Uffe N., Ochoa-Hueso, Raúl, Oliveira Filho, Luís Carlos I., Palacios-Vargas, José G., Pollierer, Melanie M., Ponge, Jean-François, Potapov, Mikhail B., Querner, Pascal, Rai, Bibishan, Raschmanová, Natália, Rashid, Muhammad Imtiaz, Raymond-Léonard, Laura J., Reis, Aline S., Ross, Giles M., Rousseau, Laurent, Russell, David J., Saifutdinov, Ruslan A., Salmon, Sandrine, Santonja, Mathieu, Saraeva, Anna K., Sayer, Emma J., Scheunemann, Nicole, Scholz, Cornelia, Seeber, Julia, Shaw, Peter, Shveenkova, Yulia B., Slade, Eleanor M., Stebaeva, Sophya, Sterzynska, Maria, Sun, Xin, Susanti, Winda Ika, Taskaeva, Anastasia A., Tay, Li Si, Thakur, Madhav P., Treasure, Anne M, Tsiafouli, Maria, Twala, Mthokozisi N., Uvarov, Alexei V., Venier, Lisa A., Widenfalk, Lina A., Widyastuti, Rahayu, Winck, Bruna, Winkler, Daniel, Wu, Donghui, Xie, Zhijing, Yin, Rui, Zampaulo, Robson A., Zeppelini, Douglas, Zhang, Bing, Zoughailech, Abdelmalek, Ashford, Oliver, Klauberg-Filho, Osmar, Scheu, Stefan, Potapov, Anton M., Chen, Ting-Wen, Striuchkova, Anastasia V., Alatalo, Juha M., Alexandre, Douglas, Arbea, Javier, Ashton, Thomas, Ashwood, Frank, Babenko, Anatoly B., Bandyopadhyaya, Ipsa, Baretta, Carolina Riviera Duarte Maluche, Baretta, Dilmar, Barnes, Andrew D., Bellini, Bruno C., Bendjaballah, Mohamed, Berg, Matty P., Bernava, Verónica, Bokhorst, Stef, Bokova, Anna I., Bolger, Thomas, Bouchard, Mathieu, Brito, Roniere A., Buchori, Damayanti, Castaño-Meneses, Gabriela, Chauvat, Matthieu, Chomel, Mathilde, Chow, Yasuko, Chown, Steven L., Classen, Aimee T., Cortet, Jérôme, Čuchta, Peter, de la Pedrosa, Ana Manuela, De Lima, Estevam C. A., Deharveng, Louis E., Doblas Miranda, Enrique, Drescher, Jochen, Eisenhauer, Nico, Ellers, Jacintha, Ferlian, Olga, Ferreira, Susana S. D., Ferreira, Aila S., Fiera, Cristina, Filser, Juliane, Franken, Oscar, Fujii, Saori, Koudji, Essivi Gagnon, Gao, Meixiang, Gendreau-Berthiaume, Benoit, Gers, Charles, Greve, Michelle, Hamra-Kroua, Salah, Handa, I. Tanya, Hasegawa, Motohiro, Heiniger, Charlène, Hishi, Takuo, Holmstrup, Martin, Homet, Pablo, Høye, Toke T., Ivask, Mari, Jacques, Bob, Janion-Scheepers, Charlene, Jochum, Malte, Joimel, Sophie, Jorge, Bruna Claudia S., Juceviča, Edite, Kapinga, Esther M., Kováč, Ľubomír, Krab, Eveline J, Krogh, Paul Henning, Kuu, Annely, Kuznetsova, Natalya, Lam, Weng Ngai, Lin, Dunmei, Lindo, Zoë, Liu, Amy W. P., Lu, Jing-Zhong, Luciáñez, María José, Marx, Michael T., Mawan, Amanda, McCary, Matthew A., Minor, Maria A., Mitchell, Grace I., Moreno, David, Nakamori, Taizo, Negri, Ilaria, Nielsen, Uffe N., Ochoa-Hueso, Raúl, Oliveira Filho, Luís Carlos I., Palacios-Vargas, José G., Pollierer, Melanie M., Ponge, Jean-François, Potapov, Mikhail B., Querner, Pascal, Rai, Bibishan, Raschmanová, Natália, Rashid, Muhammad Imtiaz, Raymond-Léonard, Laura J., Reis, Aline S., Ross, Giles M., Rousseau, Laurent, Russell, David J., Saifutdinov, Ruslan A., Salmon, Sandrine, Santonja, Mathieu, Saraeva, Anna K., Sayer, Emma J., Scheunemann, Nicole, Scholz, Cornelia, Seeber, Julia, Shaw, Peter, Shveenkova, Yulia B., Slade, Eleanor M., Stebaeva, Sophya, Sterzynska, Maria, Sun, Xin, Susanti, Winda Ika, Taskaeva, Anastasia A., Tay, Li Si, Thakur, Madhav P., Treasure, Anne M, Tsiafouli, Maria, Twala, Mthokozisi N., Uvarov, Alexei V., Venier, Lisa A., Widenfalk, Lina A., Widyastuti, Rahayu, Winck, Bruna, Winkler, Daniel, Wu, Donghui, Xie, Zhijing, Yin, Rui, Zampaulo, Robson A., Zeppelini, Douglas, Zhang, Bing, Zoughailech, Abdelmalek, Ashford, Oliver, Klauberg-Filho, Osmar, and Scheu, Stefan

Abstract

Springtails (Collembola) inhabit soils from the Arctic to the Antarctic and comprise an estimated ~32% of all terrestrial arthropods on Earth. Here, we present a global, spatially-explicit database on springtail communities that includes 249,912 occurrences from 44,999 samples and 2,990 sites. These data are mainly raw sample-level records at the species level collected predominantly from private archives of the authors that were quality-controlled and taxonomically-standardised. Despite covering all continents, most of the sample-level data come from the European continent (82.5% of all samples) and represent four habitats: woodlands (57.4%), grasslands (14.0%), agrosystems (13.7%) and scrublands (9.0%). We included sampling by soil layers, and across seasons and years, representing temporal and spatial within-site variation in springtail communities. We also provided data use and sharing guidelines and R code to facilitate the use of the database by other researchers. This data paper describes a static version of the database at the publication date, but the database will be further expanded to include underrepresented regions and linked with trait data.

Published
2024
Full Text
View/download PDF

6. Global fine-resolution data on springtail abundance and community structure

Author

Russian Science Foundation, Leipzig University, German Research Foundation, Conselho Nacional de Desenvolvimento Científico e Tecnológico (Brasil), Federal Ministry of Education and Research (Germany), Carl Tryggers Foundation, Royal Marsden NHS Foundation Trust, Centre National de la Recherche Scientifique (France), Australian Research Council, National Science Foundation (US), American Association of University Women, German Centre for Integrative Biodiversity Research, Ministry of Innovation and Technology (Hungary), National Natural Science Foundation of China, South African National Antarctic Programme, Ministerio de Ciencia e Innovación (España), Agencia Estatal de Investigación (España), European Commission, Estonian Science Foundation, Government of Canada, St. John's University, Ministére de l'Education Nationale de la Recherche et de la Technologie (France), Latvian Council of Science, Massey University, Austrian Academy of Sciences, Royal Society Te Apārangi, Slovak Research and Development Agency, Higher Education Commission (Pakistan), Natural Resources Canada, Ontario Ministry of Natural Resources and Forestry, Nanyang Technological University, Potapov, Anton [0000-0002-4456-1710], Striuchkova, Anastasia V. [0000-0002-6666-5844], Alatalo, Juha M. [0000-0001-5084-850X], Arbea, Javier I. [0000-0001-6122-1331], Babenko, Anatoly [0000-0002-6077-0619], Barnes, Andrew D. [0000-0002-6499-381X], Bellini, Bruno C. [0000-0001-7881-9436], Bernava, Verónica [0000-0002-7654-7913], Bokhorst, Stef [0000-0003-0184-1162], Castaño-Meneses, Gabriela [0000-0002-5405-5221], Chauvat, Matthieu [0000-0002-4831-5904], Chomel, Mathilde [0000-0001-5110-2355], Chown, Steven L. [0000-0001-6069-5105], Classen, Aimme T. [0000-0002-6741-3470], de Lima, Estevam C. A. [0000-0002-1680-4818], Doblas-Miranda, E. [0000-0003-3366-2759], Drescher. Jochen [0000-0002-5162-9779], Eisenhauer, Nico [0000-0002-0371-6720], Ferlian, Olga [0000-0002-2536-7592], Filser, Juliane [0000-0003-1535-6168], Franken, Oscar [0000-0001-8361-3117], Greve, Michelle [0000-0002-6229-8506], Holmstrup, Martin [0000-0001-8395-6582], Homet, Pablo [0000-0002-4285-6953], Høye, Toke T. [0000-0001-5387-3284], Janion-Scheepers, C. [0000-0001-5942-7912], Jochum, Malte [0000-0002-8728-1145], Jucevica, Edite [0000-0002-0710-9450], Kapinga, Esther M. [0000-0002-2454-6820], Kovac, L'ubomír [0000-0001-8194-2128], Krab, Eveline J. [0000-0001-8262-0198], Henning Krogh, Paul [0000-0003-2033-553X], Lindo, Zoë [0000-0001-9942-7204], Lu, Jing-Zhong [0000-0002-4051-8993], Luciánez Sánchez, Mª J. [0000-0001-5679-0951], Mawan, Amanda [0000-0003-1820-7432], Moreno Mateos, D. [0000-0002-1539-5848], Negri, Ilaria [0000-0001-5188-1408], Nielsen, Uffe N. [0000-0003-2400-7453], Ochoa-Hueso, Raúl [0000-0002-1839-6926], Oliveira Filho, Luís Carlos I. [0000-0002-9010-481X], Palacios-Vargas, José [0000-0001-9097-6813], Pollierer, Melani M. [0000-0002-1498-2362], Potapov, Mikhail B. [0000-0002-6111-3354], Rashid, Muhammad Imtiaz [0000-0002-5178-4445], Raymond-Léonard, Laura J. [0000-0002-7324-7843], Saifutdinov, Ruslan [0000-0002-8878-3630], Sayer, Emma J. [0000-0002-3322-4487], Seeber, Julia [0000-0003-0189-7377], Shveenkova, Yulia B. [0000-0003-1887-8551], Slade, Eleanor M. [0000-0002-6108-1196], Sterzynska, Maria [0000-0001-9712-4285], Sun, Xin [0000-0002-3988-7847], Taskaeva, Anastasia A. [0000-0002-4519-8458], Thakur, Madhav P. [0000-0001-9426-1313], Tsiafouli, Maria A. [0000-0003-0203-8347], Twala, Mthokozisi N. [0000-0001-6499-1892], Winck, Bruna [0000-0002-7996-9855], Winkler, Daniel E.[0000-0002-6008-0562], Yin, Rui [0000-0002-4580-1317], Zeppelini, Douglas [0000-0002-9026-1129], Scheu, Stefan [0000-0003-4350-9520], Potapov, Anton, Chen, Ting-Wen, Striuchkova, Anastasia V., Alatalo, Juha M., Alexandre, Douglas, Arbea, Javier I., Ashton, Thomas, Ashwood, Frank, Babenko, Anatoly, Bandyopadhyaya, Ipsa, Duarte Maluche Baretta, Carolina R., Joimel, Sophie, Jorge, Bruna Claudia S., Jucevica, Edite, Kapinga, Esther M., Kovac, L'ubomír, Krab, Eveline J., Henning Krogh, Paul, Kuu, Annely, Kuznetsova, Natalia A., Lam Weng, Ngai, Russell, David J., Lin, Dunmei, Lindo, Zoë, Liu, Amy, Lu, Jing-Zhong, Luciánez Sánchez, Mª J., Marx, Michael T., Mawan, Amanda, McCary, Matthew A., Minor, María A., Mitchell, Grace I., Saifutdinov, Ruslan, Moreno Mateos, D., Nakamori, Taizo, Negri, Ilaria, Nielsen, Uffe N., Ochoa-Hueso, Raúl, Oliveira Filho, Luís Carlos I., Palacios-Vargas, José, Pollierer, Melani M., Ponge, Jean-François, Potapov, Mikhail B., Salmon, Sandrine, Querner, Pascal, Rai, Bibishan, Raschmanová, Natália, Rashid, Muhammad Imtiaz, Raymond-Léonard, Laura J., Reis, Aline S., Ross, Giles M., Rousseau, Laurent, Santoja, Mathieu, Saraeva, Anna K., Sayer, Emma J., Scheunemann, Nicole, Scholz, Cornelia, Seeber, Julia, Shaw, Peter, Baretta, Dilmar, Shveenkova, Yulia B., Slade, Eleanor M., Stebaeva, Sophya K., Sterzynska, Maria, Sun, Xin, Susanti, Winda I., Taskaeva, Anastasia A., Tay, Li Si, Thakur, Madhav P., Treasure, Anne M., Barnes, Andrew D., Tsiafouli, Maria A., Twala, Mthokozisi N., Uvarov, Alexei V., Vernier, Lisa A., Widenfalk, Lina A., Widyastuti, Rahayu, Winck, Bruna, Winkler, Daniel E., Wu, Donghui, Xie, Zhijing, Bellini, Bruno C., Yin, Rui, Zampaulo, Robson A., Zeppelini, Douglas, Zhang, Bing, Zoughailech, Abdelmalek, Ashford, Oliver, Klauberg-Filho, Osmar, Scheu, Stefan, Bendjaballah, Mohamed, Berg, Matty P., Bernava, Verónica, Bokhorst, Stef, Bokova, Anna I., Bolger, Thomas, Bouchard, Mathieu, Brito, Roniere A., Buchori, Damayanti, Castaño-Meneses, Gabriela, Chauvat, Matthieu, Chomel, Mathilde, Chow, Yasuko, Chown, Steven L., Classen, Aimme T., Cortet, Jérôme, Čuchta, Peter, Pedrosa, Ana M. de la, de Lima, Estevam C. A., Deharveng, Louis, Doblas-Miranda, E., Drescher. Jochen, Eisenhauer, Nico, Ellers, J., Ferlian, Olga, Ferreira, Susana S. D., Ferreira, Alisa S., Fiera, Cristina, Filser, Juliane, Franken, Oscar, Fujii, S., Gagnon Koudji, Essivi, Gao, Meixiang, Gendreau-Berthiaume, Benoit, Gers. Charles, Greve, Michelle, Hamra-Kroua, Salah, Tanya Handa, Ira, Hasegawa, Motohiro, Heiniger, Charlène, Hishi, Takuo, Holmstrup, Martin, Homet, Pablo, Høye, Toke T., Ivask, Mari, Jacques, Bob, Janion-Scheepers, C., Jochum, Malte, Russian Science Foundation, Leipzig University, German Research Foundation, Conselho Nacional de Desenvolvimento Científico e Tecnológico (Brasil), Federal Ministry of Education and Research (Germany), Carl Tryggers Foundation, Royal Marsden NHS Foundation Trust, Centre National de la Recherche Scientifique (France), Australian Research Council, National Science Foundation (US), American Association of University Women, German Centre for Integrative Biodiversity Research, Ministry of Innovation and Technology (Hungary), National Natural Science Foundation of China, South African National Antarctic Programme, Ministerio de Ciencia e Innovación (España), Agencia Estatal de Investigación (España), European Commission, Estonian Science Foundation, Government of Canada, St. John's University, Ministére de l'Education Nationale de la Recherche et de la Technologie (France), Latvian Council of Science, Massey University, Austrian Academy of Sciences, Royal Society Te Apārangi, Slovak Research and Development Agency, Higher Education Commission (Pakistan), Natural Resources Canada, Ontario Ministry of Natural Resources and Forestry, Nanyang Technological University, Potapov, Anton [0000-0002-4456-1710], Striuchkova, Anastasia V. [0000-0002-6666-5844], Alatalo, Juha M. [0000-0001-5084-850X], Arbea, Javier I. [0000-0001-6122-1331], Babenko, Anatoly [0000-0002-6077-0619], Barnes, Andrew D. [0000-0002-6499-381X], Bellini, Bruno C. [0000-0001-7881-9436], Bernava, Verónica [0000-0002-7654-7913], Bokhorst, Stef [0000-0003-0184-1162], Castaño-Meneses, Gabriela [0000-0002-5405-5221], Chauvat, Matthieu [0000-0002-4831-5904], Chomel, Mathilde [0000-0001-5110-2355], Chown, Steven L. [0000-0001-6069-5105], Classen, Aimme T. [0000-0002-6741-3470], de Lima, Estevam C. A. [0000-0002-1680-4818], Doblas-Miranda, E. [0000-0003-3366-2759], Drescher. Jochen [0000-0002-5162-9779], Eisenhauer, Nico [0000-0002-0371-6720], Ferlian, Olga [0000-0002-2536-7592], Filser, Juliane [0000-0003-1535-6168], Franken, Oscar [0000-0001-8361-3117], Greve, Michelle [0000-0002-6229-8506], Holmstrup, Martin [0000-0001-8395-6582], Homet, Pablo [0000-0002-4285-6953], Høye, Toke T. [0000-0001-5387-3284], Janion-Scheepers, C. [0000-0001-5942-7912], Jochum, Malte [0000-0002-8728-1145], Jucevica, Edite [0000-0002-0710-9450], Kapinga, Esther M. [0000-0002-2454-6820], Kovac, L'ubomír [0000-0001-8194-2128], Krab, Eveline J. [0000-0001-8262-0198], Henning Krogh, Paul [0000-0003-2033-553X], Lindo, Zoë [0000-0001-9942-7204], Lu, Jing-Zhong [0000-0002-4051-8993], Luciánez Sánchez, Mª J. [0000-0001-5679-0951], Mawan, Amanda [0000-0003-1820-7432], Moreno Mateos, D. [0000-0002-1539-5848], Negri, Ilaria [0000-0001-5188-1408], Nielsen, Uffe N. [0000-0003-2400-7453], Ochoa-Hueso, Raúl [0000-0002-1839-6926], Oliveira Filho, Luís Carlos I. [0000-0002-9010-481X], Palacios-Vargas, José [0000-0001-9097-6813], Pollierer, Melani M. [0000-0002-1498-2362], Potapov, Mikhail B. [0000-0002-6111-3354], Rashid, Muhammad Imtiaz [0000-0002-5178-4445], Raymond-Léonard, Laura J. [0000-0002-7324-7843], Saifutdinov, Ruslan [0000-0002-8878-3630], Sayer, Emma J. [0000-0002-3322-4487], Seeber, Julia [0000-0003-0189-7377], Shveenkova, Yulia B. [0000-0003-1887-8551], Slade, Eleanor M. [0000-0002-6108-1196], Sterzynska, Maria [0000-0001-9712-4285], Sun, Xin [0000-0002-3988-7847], Taskaeva, Anastasia A. [0000-0002-4519-8458], Thakur, Madhav P. [0000-0001-9426-1313], Tsiafouli, Maria A. [0000-0003-0203-8347], Twala, Mthokozisi N. [0000-0001-6499-1892], Winck, Bruna [0000-0002-7996-9855], Winkler, Daniel E.[0000-0002-6008-0562], Yin, Rui [0000-0002-4580-1317], Zeppelini, Douglas [0000-0002-9026-1129], Scheu, Stefan [0000-0003-4350-9520], Potapov, Anton, Chen, Ting-Wen, Striuchkova, Anastasia V., Alatalo, Juha M., Alexandre, Douglas, Arbea, Javier I., Ashton, Thomas, Ashwood, Frank, Babenko, Anatoly, Bandyopadhyaya, Ipsa, Duarte Maluche Baretta, Carolina R., Joimel, Sophie, Jorge, Bruna Claudia S., Jucevica, Edite, Kapinga, Esther M., Kovac, L'ubomír, Krab, Eveline J., Henning Krogh, Paul, Kuu, Annely, Kuznetsova, Natalia A., Lam Weng, Ngai, Russell, David J., Lin, Dunmei, Lindo, Zoë, Liu, Amy, Lu, Jing-Zhong, Luciánez Sánchez, Mª J., Marx, Michael T., Mawan, Amanda, McCary, Matthew A., Minor, María A., Mitchell, Grace I., Saifutdinov, Ruslan, Moreno Mateos, D., Nakamori, Taizo, Negri, Ilaria, Nielsen, Uffe N., Ochoa-Hueso, Raúl, Oliveira Filho, Luís Carlos I., Palacios-Vargas, José, Pollierer, Melani M., Ponge, Jean-François, Potapov, Mikhail B., Salmon, Sandrine, Querner, Pascal, Rai, Bibishan, Raschmanová, Natália, Rashid, Muhammad Imtiaz, Raymond-Léonard, Laura J., Reis, Aline S., Ross, Giles M., Rousseau, Laurent, Santoja, Mathieu, Saraeva, Anna K., Sayer, Emma J., Scheunemann, Nicole, Scholz, Cornelia, Seeber, Julia, Shaw, Peter, Baretta, Dilmar, Shveenkova, Yulia B., Slade, Eleanor M., Stebaeva, Sophya K., Sterzynska, Maria, Sun, Xin, Susanti, Winda I., Taskaeva, Anastasia A., Tay, Li Si, Thakur, Madhav P., Treasure, Anne M., Barnes, Andrew D., Tsiafouli, Maria A., Twala, Mthokozisi N., Uvarov, Alexei V., Vernier, Lisa A., Widenfalk, Lina A., Widyastuti, Rahayu, Winck, Bruna, Winkler, Daniel E., Wu, Donghui, Xie, Zhijing, Bellini, Bruno C., Yin, Rui, Zampaulo, Robson A., Zeppelini, Douglas, Zhang, Bing, Zoughailech, Abdelmalek, Ashford, Oliver, Klauberg-Filho, Osmar, Scheu, Stefan, Bendjaballah, Mohamed, Berg, Matty P., Bernava, Verónica, Bokhorst, Stef, Bokova, Anna I., Bolger, Thomas, Bouchard, Mathieu, Brito, Roniere A., Buchori, Damayanti, Castaño-Meneses, Gabriela, Chauvat, Matthieu, Chomel, Mathilde, Chow, Yasuko, Chown, Steven L., Classen, Aimme T., Cortet, Jérôme, Čuchta, Peter, Pedrosa, Ana M. de la, de Lima, Estevam C. A., Deharveng, Louis, Doblas-Miranda, E., Drescher. Jochen, Eisenhauer, Nico, Ellers, J., Ferlian, Olga, Ferreira, Susana S. D., Ferreira, Alisa S., Fiera, Cristina, Filser, Juliane, Franken, Oscar, Fujii, S., Gagnon Koudji, Essivi, Gao, Meixiang, Gendreau-Berthiaume, Benoit, Gers. Charles, Greve, Michelle, Hamra-Kroua, Salah, Tanya Handa, Ira, Hasegawa, Motohiro, Heiniger, Charlène, Hishi, Takuo, Holmstrup, Martin, Homet, Pablo, Høye, Toke T., Ivask, Mari, Jacques, Bob, Janion-Scheepers, C., and Jochum, Malte

Abstract

Springtails (Collembola) inhabit soils from the Arctic to the Antarctic and comprise an estimated ~32% of all terrestrial arthropods on Earth. Here, we present a global, spatially-explicit database on springtail communities that includes 249,912 occurrences from 44,999 samples and 2,990 sites. These data are mainly raw sample-level records at the species level collected predominantly from private archives of the authors that were quality-controlled and taxonomically-standardised. Despite covering all continents, most of the sample-level data come from the European continent (82.5% of all samples) and represent four habitats: woodlands (57.4%), grasslands (14.0%), agrosystems (13.7%) and scrublands (9.0%). We included sampling by soil layers, and across seasons and years, representing temporal and spatial within-site variation in springtail communities. We also provided data use and sharing guidelines and R code to facilitate the use of the database by other researchers. This data paper describes a static version of the database at the publication date, but the database will be further expanded to include underrepresented regions and linked with trait data.

Published
2024

7. Soil BON Earthworm: A global initiative on earthworm distribution, traits, and spatiotemporal diversity patterns

Author

Ganault, Pierre, Ristok, Christian, Phillips, Helen, Hedde, Mickael, Capowiez, Yvan, Bottinelli, Nicolas, Decaëns, Thibaud, Marchan, Daniel, Gerard, Sylvain, Mathieu, Jérôme, Potapov, Anton M., Cameron, Erin K., Brown, George, Bartz, Marie L. C., Zeiss, Romy, Zi, Yacouba, Tsiafouli, Maria A., Russell, David J., Guerra, Carlos A., Eisenhauer, Nico, Ganault, Pierre, Ristok, Christian, Phillips, Helen, Hedde, Mickael, Capowiez, Yvan, Bottinelli, Nicolas, Decaëns, Thibaud, Marchan, Daniel, Gerard, Sylvain, Mathieu, Jérôme, Potapov, Anton M., Cameron, Erin K., Brown, George, Bartz, Marie L. C., Zeiss, Romy, Zi, Yacouba, Tsiafouli, Maria A., Russell, David J., Guerra, Carlos A., and Eisenhauer, Nico

Abstract

Recent research on earthworms has shed light on their global distribution, with high alpha richness in temperate zones and high beta diversity in tropical areas. Climate and agricultural practices, notably plowing and conservation methods, were shown to strongly influence earthworm communities. However, data gaps persist in regions like North Australia, Asia, Russia, and Africa, limiting our understanding of earthworm distribution and their responses to global changes. Understanding changes within earthworm communities is crucial given their profound influence on ecosystem functions such as soil structure, nutrient dynamics, and plant growth. Classifying earthworms into functional groups remains complex, prompting the adoption of a trait-based approach for a more comprehensive classification, but there is no representative global data on earthworm traits. To address these knowledge gaps, the Soil BON Earthworm initiative aims at creating a global community of earthworm experts, standardizing sampling methods and databases, collecting time series data on earthworm communities, and modeling future earthworm distributions under different climate scenarios. The initiative aims to address key questions, such as the dynamic of earthworm communities over time and their response to environmental factors and anthropogenic influences, their impact on ecosystem functioning, and the redefinition of functional groups based on traits. The consortium invites researchers worldwide to contribute to this endeavor and encourages the resampling of study sites, to expand currently limited time series datasets. To facilitate data collection, standardized protocols and data templates are proposed, ensuring data quality and interoperability. Furthermore, the initiative intends to make use of citizen science in expanding observations and improving taxonomic coverage, highlighting platforms like iNaturalist for community engagement. Soil BON Earthworm seeks to unite global expertise and fost

Published
2024

8. Preliminary assessment of the knowledge gaps to improve nature conservation of soil biodiversity

Author

Guerra, Carlos A. [0000-0003-4917-2105], Delgado-Baquerizo, Manuel [0000-0002-6499-576X], Eisenhauer, Nico [0000-0002-0371-6720], Orgiazzi, Alberto [0000-0002-8390-6654], Potapov, Anton [0000-0002-4456-1710], Wall, Diana H. [0000-0002-9466-5235], Farfan, Mónica A., Guerra, Carlos A., Hedlund, Katarina, Ingimarsdóttir, María, Barrios, Edmundo, Cox, Neil, Dahlberg, Anders, Delgado-Baquerizo, Manuel, Eisenhauer, Nico, Lundesjö, Maria, Orgiazzi, Alberto, Parnell, J. Jacob, Potapov, Anton, Ramirez, Kelly S., Raschmanová, Natália, Russell, David J., Wall, Diana H., Zaytsev, Andrey, Guerra, Carlos A. [0000-0003-4917-2105], Delgado-Baquerizo, Manuel [0000-0002-6499-576X], Eisenhauer, Nico [0000-0002-0371-6720], Orgiazzi, Alberto [0000-0002-8390-6654], Potapov, Anton [0000-0002-4456-1710], Wall, Diana H. [0000-0002-9466-5235], Farfan, Mónica A., Guerra, Carlos A., Hedlund, Katarina, Ingimarsdóttir, María, Barrios, Edmundo, Cox, Neil, Dahlberg, Anders, Delgado-Baquerizo, Manuel, Eisenhauer, Nico, Lundesjö, Maria, Orgiazzi, Alberto, Parnell, J. Jacob, Potapov, Anton, Ramirez, Kelly S., Raschmanová, Natália, Russell, David J., Wall, Diana H., and Zaytsev, Andrey

Abstract

In the past decades, there has been an increasing awareness of the importance of Nature Conservation of Soil Biodiversity. Approximately 59% of all biodiversity on the planet is comprised of soil living organisms (Anthony et al. 2023), ranging from microorganisms to vertebrate species (FAO et al. 2020, Anthony et al. 2023). Soil biodiversity plays a central role in soil health and ecosystem services, as the activities of soil biota support the delivery of various ecosystem services, such as carbon sequestration, nutrient cycling, prevention of soil erosion, pest control, and cleaning of air and water (Banerjee and van der Heijden 2023, Creamer et al. 2022, Pulleman et al. 2012). However, soil biodiversity is currently threatened by intensive agriculture and forestry as well as soil sealing in urban environments. Protecting soil biodiversity and thus its ecosystem functions and services will have positive effects on a number of sustainability development goals (SDGs), including water quality and food security, among others (FAO et al. 2020, Köninger et al. 2022). Nevertheless, recent work did not find positive effects of current conservation practices on soil biodiversity and its ecosystem functions (Zeiss et al. 2022). The authors suggest this is predominantly because the priorities and the decision-making paradigms used for selection of sites for conservation do not take into account soil biodiversity, its associated ecosystem functions, or the value of belowground ecosystems to human well-being and economic development (Bardgett and van der Putten 2014, FAO et al. 2020, Zeiss et al. 2022). While biodiversity-friendly management approaches, such as ecological intensification (Kleijn et al. 2019), regenerative agriculture and agroecology (Barrios et al. 2023, FAO 2023, Grilli et al. 2023) are receiving increasing attention, studies focused on conservation of soil biodiversity and its ecosystem functions are still limited (Bardgett and van der Putten 2014, FAO et al.

Published
2024

9. Global fine-resolution data on springtail abundance and community structure

Author

Potapov, Anton M., primary, Chen, Ting-Wen, additional, Striuchkova, Anastasia V., additional, Alatalo, Juha M., additional, Alexandre, Douglas, additional, Arbea, Javier, additional, Ashton, Thomas, additional, Ashwood, Frank, additional, Babenko, Anatoly B., additional, Bandyopadhyaya, Ipsa, additional, Baretta, Carolina Riviera Duarte Maluche, additional, Baretta, Dilmar, additional, Barnes, Andrew D., additional, Bellini, Bruno C., additional, Bendjaballah, Mohamed, additional, Berg, Matty P., additional, Bernava, Verónica, additional, Bokhorst, Stef, additional, Bokova, Anna I., additional, Bolger, Thomas, additional, Bouchard, Mathieu, additional, Brito, Roniere A., additional, Buchori, Damayanti, additional, Castaño-Meneses, Gabriela, additional, Chauvat, Matthieu, additional, Chomel, Mathilde, additional, Chow, Yasuko, additional, Chown, Steven L., additional, Classen, Aimee T., additional, Cortet, Jérôme, additional, Čuchta, Peter, additional, de la Pedrosa, Ana Manuela, additional, De Lima, Estevam C. A., additional, Deharveng, Louis E., additional, Doblas Miranda, Enrique, additional, Drescher, Jochen, additional, Eisenhauer, Nico, additional, Ellers, Jacintha, additional, Ferlian, Olga, additional, Ferreira, Susana S. D., additional, Ferreira, Aila S., additional, Fiera, Cristina, additional, Filser, Juliane, additional, Franken, Oscar, additional, Fujii, Saori, additional, Koudji, Essivi Gagnon, additional, Gao, Meixiang, additional, Gendreau-Berthiaume, Benoit, additional, Gers, Charles, additional, Greve, Michelle, additional, Hamra-Kroua, Salah, additional, Handa, I. Tanya, additional, Hasegawa, Motohiro, additional, Heiniger, Charlène, additional, Hishi, Takuo, additional, Holmstrup, Martin, additional, Homet, Pablo, additional, Høye, Toke T., additional, Ivask, Mari, additional, Jacques, Bob, additional, Janion-Scheepers, Charlene, additional, Jochum, Malte, additional, Joimel, Sophie, additional, Jorge, Bruna Claudia S., additional, Juceviča, Edite, additional, Kapinga, Esther M., additional, Kováč, Ľubomír, additional, Krab, Eveline J., additional, Krogh, Paul Henning, additional, Kuu, Annely, additional, Kuznetsova, Natalya, additional, Lam, Weng Ngai, additional, Lin, Dunmei, additional, Lindo, Zoë, additional, Liu, Amy W. P., additional, Lu, Jing-Zhong, additional, Luciáñez, María José, additional, Marx, Michael T., additional, Mawan, Amanda, additional, McCary, Matthew A., additional, Minor, Maria A., additional, Mitchell, Grace I., additional, Moreno, David, additional, Nakamori, Taizo, additional, Negri, Ilaria, additional, Nielsen, Uffe N., additional, Ochoa-Hueso, Raúl, additional, Oliveira Filho, Luís Carlos I., additional, Palacios-Vargas, José G., additional, Pollierer, Melanie M., additional, Ponge, Jean-François, additional, Potapov, Mikhail B., additional, Querner, Pascal, additional, Rai, Bibishan, additional, Raschmanová, Natália, additional, Rashid, Muhammad Imtiaz, additional, Raymond-Léonard, Laura J., additional, Reis, Aline S., additional, Ross, Giles M., additional, Rousseau, Laurent, additional, Russell, David J., additional, Saifutdinov, Ruslan A., additional, Salmon, Sandrine, additional, Santonja, Mathieu, additional, Saraeva, Anna K., additional, Sayer, Emma J., additional, Scheunemann, Nicole, additional, Scholz, Cornelia, additional, Seeber, Julia, additional, Shaw, Peter, additional, Shveenkova, Yulia B., additional, Slade, Eleanor M., additional, Stebaeva, Sophya, additional, Sterzynska, Maria, additional, Sun, Xin, additional, Susanti, Winda Ika, additional, Taskaeva, Anastasia A., additional, Tay, Li Si, additional, Thakur, Madhav P., additional, Treasure, Anne M, additional, Tsiafouli, Maria, additional, Twala, Mthokozisi N., additional, Uvarov, Alexei V., additional, Venier, Lisa A., additional, Widenfalk, Lina A., additional, Widyastuti, Rahayu, additional, Winck, Bruna, additional, Winkler, Daniel, additional, Wu, Donghui, additional, Xie, Zhijing, additional, Yin, Rui, additional, Zampaulo, Robson A., additional, Zeppelini, Douglas, additional, Zhang, Bing, additional, Zoughailech, Abdelmalek, additional, Ashford, Oliver, additional, Klauberg-Filho, Osmar, additional, and Scheu, Stefan, additional

Published
2024
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10. Global data on earthworm abundance, biomass, diversity and corresponding environmental properties

Author

Phillips, Helen R. P., Bach, Elizabeth M., Bartz, Marie L. C., Bennett, Joanne M., Beugnon, Rémy, Briones, Maria J. I., Brown, George G., Ferlian, Olga, Gongalsky, Konstantin B., Guerra, Carlos A., König-Ries, Birgitta, Krebs, Julia J., Orgiazzi, Alberto, Ramirez, Kelly S., Russell, David J., Schwarz, Benjamin, Wall, Diana H., Brose, Ulrich, Decaëns, Thibaud, Lavelle, Patrick, Loreau, Michel, Mathieu, Jérôme, Mulder, Christian, van der Putten, Wim H., Rillig, Matthias C., Thakur, Madhav P., de Vries, Franciska T., Wardle, David A., Ammer, Christian, Ammer, Sabine, Arai, Miwa, Ayuke, Fredrick O., Baker, Geoff H., Baretta, Dilmar, Barkusky, Dietmar, Beauséjour, Robin, Bedano, Jose C., Birkhofer, Klaus, Blanchart, Eric, Blossey, Bernd, Bolger, Thomas, Bradley, Robert L., Brossard, Michel, Burtis, James C., Capowiez, Yvan, Cavagnaro, Timothy R., Choi, Amy, Clause, Julia, Cluzeau, Daniel, Coors, Anja, Crotty, Felicity V., Crumsey, Jasmine M., Dávalos, Andrea, Cosín, Darío J. Díaz, Dobson, Annise M., Domínguez, Anahí, Duhour, Andrés Esteban, van Eekeren, Nick, Emmerling, Christoph, Falco, Liliana B., Fernández, Rosa, Fonte, Steven J., Fragoso, Carlos, Franco, André L. C., Fusilero, Abegail, Geraskina, Anna P., Gholami, Shaieste, González, Grizelle, Gundale, Michael J., López, Mónica Gutiérrez, Hackenberger, Branimir K., Hackenberger, Davorka K., Hernández, Luis M., Hirth, Jeff R., Hishi, Takuo, Holdsworth, Andrew R., Holmstrup, Martin, Hopfensperger, Kristine N., Lwanga, Esperanza Huerta, Huhta, Veikko, Hurisso, Tunsisa T., Iannone, III, Basil V., Iordache, Madalina, Irmler, Ulrich, Ivask, Mari, Jesús, Juan B., Johnson-Maynard, Jodi L., Joschko, Monika, Kaneko, Nobuhiro, Kanianska, Radoslava, Keith, Aidan M., Kernecker, Maria L., Koné, Armand W., Kooch, Yahya, Kukkonen, Sanna T., Lalthanzara, H., Lammel, Daniel R., Lebedev, Iurii M., Le Cadre, Edith, Lincoln, Noa K., López-Hernández, Danilo, Loss, Scott R., Marichal, Raphael, Matula, Radim, Minamiya, Yukio, Moos, Jan Hendrik, Moreno, Gerardo, Morón-Ríos, Alejandro, Motohiro, Hasegawa, Muys, Bart, Neirynck, Johan, Norgrove, Lindsey, Novo, Marta, Nuutinen, Visa, Nuzzo, Victoria, Mujeeb Rahman, P., Pansu, Johan, Paudel, Shishir, Pérès, Guénola, Pérez-Camacho, Lorenzo, Ponge, Jean-François, Prietzel, Jörg, Rapoport, Irina B., Rashid, Muhammad Imtiaz, Rebollo, Salvador, Rodríguez, Miguel Á., Roth, Alexander M., Rousseau, Guillaume X., Rozen, Anna, Sayad, Ehsan, van Schaik, Loes, Scharenbroch, Bryant, Schirrmann, Michael, Schmidt, Olaf, Schröder, Boris, Seeber, Julia, Shashkov, Maxim P., Singh, Jaswinder, Smith, Sandy M., Steinwandter, Michael, Szlavecz, Katalin, Talavera, José Antonio, Trigo, Dolores, Tsukamoto, Jiro, Uribe-López, Sheila, de Valença, Anne W., Virto, Iñigo, Wackett, Adrian A., Warren, Matthew W., Webster, Emily R., Wehr, Nathaniel H., Whalen, Joann K., Wironen, Michael B., Wolters, Volkmar, Wu, Pengfei, Zenkova, Irina V., Zhang, Weixin, Cameron, Erin K., and Eisenhauer, Nico

Published
2021
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11. Reaction monitoring via benchtop nuclear magnetic resonance spectroscopy: A practical comparison of on‐line stopped‐flow and continuous‐flow sampling methods.

Author

Maschmeyer, Tristan, Russell, David J., Napolitano, José G., and Hein, Jason E.

Subjects
*NUCLEAR magnetic resonance spectroscopy, *SAMPLING methods, *NUCLEAR magnetic resonance, *SPIN-lattice relaxation, *CORRECTION factors
Abstract

The ability for nuclear magnetic resonance (NMR) spectroscopy to provide quantitative, structurally rich information makes this spectroscopic technique an attractive reaction monitoring tool. The practicality of NMR for this type of analysis has only increased in the recent years with the influx of commercially available benchtop NMR instruments and compatible flow systems. In this study, we aim to compare 19F NMR reaction profiles acquired under both on‐line continuous‐flow and stopped‐flow sampling methods, with modern benchtop NMR instrumentation, and two reaction systems: a homogeneous imination reaction and a biphasic activation of a carboxylic acid to acyl fluoride. Reaction trends with higher data density can be acquired with on‐line continuous‐flow analyses, and this work highlights that representative reaction trends can be acquired without any correction when monitoring resonances with a shorter spin–lattice relaxation time (T1), and with the used flow conditions. On‐line stopped‐flow analyses resulted in representative reaction trends in all cases, including the monitoring of resonances with a long T1, without the need of any correction factors. The benefit of easier data analysis, however, comes with the cost of time, as the fresh reaction solution must be flowed into the NMR system, halted, and time must be provided for spins to become polarized in the instrument's external magnetic field prior to spectral measurement. Results for one of the reactions were additionally compared with the use of a high‐field NMR. [ABSTRACT FROM AUTHOR]

Published
2024
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12. A reliable external calibration method for reaction monitoring with benchtop NMR.

Author

Maschmeyer, Tristan, Conklin, Breanna, Malig, Thomas C., Russell, David J., Kurita, Kenji L., Hein, Jason E., and Napolitano, José G.

Subjects
NUCLEAR magnetic resonance spectroscopy, MAGNETIC flux density, NUCLEAR magnetic resonance, NMR spectrometers, CALIBRATION, CHEMICAL amplification
Abstract

Nuclear magnetic resonance (NMR) spectroscopy is a powerful analytical technique with the ability to acquire both quantitative and structurally insightful data for multiple components in a test sample. This makes NMR spectroscopy a desirable tool to understand, monitor, and optimize chemical transformations. While quantitative NMR (qNMR) approaches relying on internal standards are well‐established, using an absolute external calibration scheme is beneficial for reaction monitoring as resonance overlap complications from an added reference material to the sample can be avoided. Particularly, this type of qNMR technique is of interest with benchtop NMR spectrometers as the likelihood of resonance overlap is only enhanced with the lower magnetic field strengths of the used permanent magnets. The included study describes a simple yet robust methodology to determine concentration conversion factors for NMR systems using single‐ and multi‐analyte linear regression models. This approach is leveraged to investigate a pharmaceutically relevant amide coupling batch reaction. An on‐line stopped‐flow (i.e., interrupted‐flow or paused‐flow) benchtop NMR system was used to monitor both the 1,1′‐carbonyldiimidazole (CDI) promoted acid activation and the amide coupling. The results highlight how quantitative measurements in benchtop NMR systems can provide valuable information and enable analysts to make decisions in real time. [ABSTRACT FROM AUTHOR]

Published
2024
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19. The effect of tube quality on externally calibrated quantitative nuclear magnetic resonance analysis: How bad can it be?

Author

Ochoa, Jessica L., Germann, Stephan, Conklin, Breanna, Kurita, Kenji, Russell, David J., Yang, Cassie, and Napolitano, José G.

Subjects
NUCLEAR magnetic resonance, NUCLEAR magnetic resonance spectroscopy, CHEMICAL shift (Nuclear magnetic resonance), TUBES
Abstract

Externally calibrated quantitative nuclear magnetic resonance (NMR) approaches offer practical means to simultaneously evaluate chemical identity and content without the addition of calibrants to the test sample. Despite continuous advances in external calibration over the last few decades, adoption of these approaches has been slower than expected. Variations in NMR tube geometry are a commonly overlooked factor that can have a substantial effect on externally calibrated quantitation methods. In this report, we investigate the extent to which tube‐to‐tube volume variability can affect quantitative NMR outcomes. The results highlight the importance of considering tube quality during the development stages of externally calibrated quantitative methods. In addition, we propose a simple, yet effective volume correction strategy using the residual protonated solvent signal that, based on experiments with mixed NMR tubes of varying quality, alleviates the effect of tube‐to‐tube variability. [ABSTRACT FROM AUTHOR]

Published
2024
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20. Globally invariant metabolism but density-diversity mismatch in springtails

Author

Russian Science Foundation, University of Göttingen, Securing Antarctica's Environmental Future (Australia), National Natural Science Foundation of China, South African National Antarctic Programme, Natural Resources Canada, Natural Sciences and Engineering Research Council of Canada, Independent Research Fund Denmark, Estonian Science Foundation, European Research Council, European Commission, German Research Foundation, Agence Nationale de la Recherche (France), Ministère de l'Agriculture et de la Souveraineté alimentaire (France), Ministére de l'Education Nationale de la Recherche et de la Technologie (France), Ministère de la Transition écologique et de la Cohésion des territoires (France), Agence de l'Environnement et de la Maîtrise de l'Energie (France), Fundamental Research Funds for the Central Universities (China), Massey University, Austrian Academy of Sciences, Higher Education Commission (Pakistan), Government of Austria, Conselho Nacional de Desenvolvimento Científico e Tecnológico (Brasil), Fundação de Apoio à Pesquisa Científica e Tecnológica do Estado de Santa Catarina, Latvian Council of Science, Ministerio de Ciencia e Innovación (España), Ministry of Innovation and Technology (Hungary), Potapov, Anton [0000-0002-4456-1710], Guerra, Carlos A. [0000-0003-4917-2105], Babenko, Anatoly [0000-0002-6077-0619], Bellini, Bruno C. [0000-0001-7881-9436], Chown, Steven L. [0000-0001-6069-5105], Kovac, L'ubomír [0000-0001-8194-2128], Alatalo, Juha M. [0000-0001-5084-850X], Arbea, Javier I. [0000-0001-6122-1331], Bokhorst, Stef [0000-0003-0184-1162], Castaño-Meneses, Gabriela [0000-0002-5405-5221], Chauvat, Matthieu [0000-0002-4831-5904], Chomel, Mathilde [0000-0001-5110-2355], Classen, Aimme T. [0000-0002-6741-3470], Filser, Juliane [0000-0003-1535-6168], Franken, Oscar [0000-0001-8361-3117], Greve, Michelle [0000-0002-6229-8506], Holmstrup, Martin [0000-0001-8395-6582], Homet, Pablo [0000-0002-4285-6953], Janion-Scheepers, C. [0000-0001-5942-7912], Jochum, Malte [0000-0002-8728-1145], Jucevica, Edite [0000-0002-0710-9450], Ferlian, Olga [0000-0002-2536-7592], Oliveira Filho, Luís Carlos I. [0000-0002-9010-481X], Krab, Eveline J. [0000-0001-8262-0198], de Lima, Estevam C. A. [0000-0002-1680-4818], Lindo, Zoë [0000-0001-9942-7204], Lu, Jing-Zhong [0000-0002-4051-8993], Negri, Ilaria [0000-0001-5188-1408], Ochoa-Hueso, Raúl [0000-0002-1839-6926], Palacios-Vargas, José [0000-0001-9097-6813], Pollierer, Melani M. [0000-0002-1498-2362], Rashid, Muhammad Imtiaz [0000-0002-5178-4445], Raymond-Léonard, Laura J. [0000-0002-7324-7843], Saifutdinov, Ruslan [0000-0002-8878-3630], Sayer, Emma J. [0000-0002-3322-4487], Seeber, Julia [0000-0003-0189-7377], Shveenkova, Yulia B. [0000-0003-1887-8551], Sterzynska, Maria [0000-0001-9712-4285], Sun, Xin [0000-0002-3988-7847], Taskaeva, Anastasia A. [0000-0002-4519-8458], Thakur, Madhav P. [0000-0001-9426-1313], Tsiafouli, Maria A. [0000-0003-0203-8347], Twala, Mthokozisi N. [0000-0001-6499-1892], Winck, Bruna [0000-0002-7996-9855], Winkler, Daniel E.[0000-0002-6008-0562], Yin, Rui [0000-0002-4580-1317], Zeppelini, Douglas [0000-0002-9026-1129], Crowther, Thomas W. [0000-0001-5674-8913], Eisenhauer, Nico [0000-0002-0371-6720], Scheu, Stefan [0000-0003-4350-9520], Luciánez Sánchez, Mª J. [0000-0001-5679-0951], Potapov, Mikhail B. [0000-0002-6111-3354], Potapov, Anton, Guerra, Carlos A., van den Hoogen, Johan, Babenko, Anatoly, Bellini, Bruno C., Berg, Matty P., Chown, Steven L., Deharveng, Louis, Kovac, L'ubomír, Kuznetsova, Natalia A., Ponge, Jean-François, Yin, Rui, Zeppelini, Douglas, Crowther, Thomas W., Eisenhauer, Nico, Scheu, Stefan, Potapov, Mikhail B., Russell, David J., Alexandre, Douglas, Alatalo, Juha M., Arbea, Javier I., Bandyopadhyaya, Ipsa, Bernava, Verónica, Bokhorst, Stef, Bolger, Thomas, Castaño-Meneses, Gabriela, Chauvat, Matthieu, Chen, Ting-Wen, Chomel, Mathilde, Classen, Aimme T., Cortet, Jérôme, Čuchta, Peter, Pedrosa, Ana M. de la, Ferreira, Susana S. D., Fiera, Cristina, Filser, Juliane, Franken, Oscar, Fujii, S., Gagnon Koudji, Essivi, Gao, Meixiang, Gendreau-Berthiaume, Benoit, Gómez-Pamies, Diego F., Greve, Michelle, Handa, I. Tanya, Heiniger, Charlène, Holmstrup, Martin, Homet, Pablo, Ivask, Mari, Janion-Scheepers, C., Jochum, Malte, Joimel, Sophie, Jorge, Bruna Claudia S., Jucevica, Edite, Ferlian, Olga, Oliveira Filho, Luís Carlos I., Klauberg-Filho, Osmar, Baretta, Dilmar, Krab, Eveline J., Kuu, Annely, de Lima, Estevam C. A., Lin, Dunmei, Lindo, Zoë, Liu, Amy, Lu, Jing-Zhong, Luciánez Sánchez, Mª J., Marx, Michael T., McCary, Matthew A., Minor, María A., Nakamori, Taizo, Negri, Ilaria, Ochoa-Hueso, Raúl, Palacios-Vargas, José, Pollierer, Melani M., Querner, Pascal, Raschmanová, Natália, Rashid, Muhammad Imtiaz, Raymond-Léonard, Laura J., Rousseau, Laurent, Saifutdinov, Ruslan, Salmon, Sandrine, Sayer, Emma J., Scheunemann, Nicole, Scholz, Cornelia, Seeber, Julia, Shveenkova, Yulia B., Stebaeva, Sophya K., Sterzynska, Maria, Sun, Xin, Susanti, Winda I., Taskaeva, Anastasia A., Thakur, Madhav P., Tsiafouli, Maria A., Turnbull, Matthew S., Twala, Mthokozisi N., Uvarov, Alexei V., Vernier, Lisa A., Widenfalk, Lina A., Winck, Bruna, Winkler, Daniel E., Wu, Donghui, Xie, Zhijing, Russian Science Foundation, University of Göttingen, Securing Antarctica's Environmental Future (Australia), National Natural Science Foundation of China, South African National Antarctic Programme, Natural Resources Canada, Natural Sciences and Engineering Research Council of Canada, Independent Research Fund Denmark, Estonian Science Foundation, European Research Council, European Commission, German Research Foundation, Agence Nationale de la Recherche (France), Ministère de l'Agriculture et de la Souveraineté alimentaire (France), Ministére de l'Education Nationale de la Recherche et de la Technologie (France), Ministère de la Transition écologique et de la Cohésion des territoires (France), Agence de l'Environnement et de la Maîtrise de l'Energie (France), Fundamental Research Funds for the Central Universities (China), Massey University, Austrian Academy of Sciences, Higher Education Commission (Pakistan), Government of Austria, Conselho Nacional de Desenvolvimento Científico e Tecnológico (Brasil), Fundação de Apoio à Pesquisa Científica e Tecnológica do Estado de Santa Catarina, Latvian Council of Science, Ministerio de Ciencia e Innovación (España), Ministry of Innovation and Technology (Hungary), Potapov, Anton [0000-0002-4456-1710], Guerra, Carlos A. [0000-0003-4917-2105], Babenko, Anatoly [0000-0002-6077-0619], Bellini, Bruno C. [0000-0001-7881-9436], Chown, Steven L. [0000-0001-6069-5105], Kovac, L'ubomír [0000-0001-8194-2128], Alatalo, Juha M. [0000-0001-5084-850X], Arbea, Javier I. [0000-0001-6122-1331], Bokhorst, Stef [0000-0003-0184-1162], Castaño-Meneses, Gabriela [0000-0002-5405-5221], Chauvat, Matthieu [0000-0002-4831-5904], Chomel, Mathilde [0000-0001-5110-2355], Classen, Aimme T. [0000-0002-6741-3470], Filser, Juliane [0000-0003-1535-6168], Franken, Oscar [0000-0001-8361-3117], Greve, Michelle [0000-0002-6229-8506], Holmstrup, Martin [0000-0001-8395-6582], Homet, Pablo [0000-0002-4285-6953], Janion-Scheepers, C. [0000-0001-5942-7912], Jochum, Malte [0000-0002-8728-1145], Jucevica, Edite [0000-0002-0710-9450], Ferlian, Olga [0000-0002-2536-7592], Oliveira Filho, Luís Carlos I. [0000-0002-9010-481X], Krab, Eveline J. [0000-0001-8262-0198], de Lima, Estevam C. A. [0000-0002-1680-4818], Lindo, Zoë [0000-0001-9942-7204], Lu, Jing-Zhong [0000-0002-4051-8993], Negri, Ilaria [0000-0001-5188-1408], Ochoa-Hueso, Raúl [0000-0002-1839-6926], Palacios-Vargas, José [0000-0001-9097-6813], Pollierer, Melani M. [0000-0002-1498-2362], Rashid, Muhammad Imtiaz [0000-0002-5178-4445], Raymond-Léonard, Laura J. [0000-0002-7324-7843], Saifutdinov, Ruslan [0000-0002-8878-3630], Sayer, Emma J. [0000-0002-3322-4487], Seeber, Julia [0000-0003-0189-7377], Shveenkova, Yulia B. [0000-0003-1887-8551], Sterzynska, Maria [0000-0001-9712-4285], Sun, Xin [0000-0002-3988-7847], Taskaeva, Anastasia A. [0000-0002-4519-8458], Thakur, Madhav P. [0000-0001-9426-1313], Tsiafouli, Maria A. [0000-0003-0203-8347], Twala, Mthokozisi N. [0000-0001-6499-1892], Winck, Bruna [0000-0002-7996-9855], Winkler, Daniel E.[0000-0002-6008-0562], Yin, Rui [0000-0002-4580-1317], Zeppelini, Douglas [0000-0002-9026-1129], Crowther, Thomas W. [0000-0001-5674-8913], Eisenhauer, Nico [0000-0002-0371-6720], Scheu, Stefan [0000-0003-4350-9520], Luciánez Sánchez, Mª J. [0000-0001-5679-0951], Potapov, Mikhail B. [0000-0002-6111-3354], Potapov, Anton, Guerra, Carlos A., van den Hoogen, Johan, Babenko, Anatoly, Bellini, Bruno C., Berg, Matty P., Chown, Steven L., Deharveng, Louis, Kovac, L'ubomír, Kuznetsova, Natalia A., Ponge, Jean-François, Yin, Rui, Zeppelini, Douglas, Crowther, Thomas W., Eisenhauer, Nico, Scheu, Stefan, Potapov, Mikhail B., Russell, David J., Alexandre, Douglas, Alatalo, Juha M., Arbea, Javier I., Bandyopadhyaya, Ipsa, Bernava, Verónica, Bokhorst, Stef, Bolger, Thomas, Castaño-Meneses, Gabriela, Chauvat, Matthieu, Chen, Ting-Wen, Chomel, Mathilde, Classen, Aimme T., Cortet, Jérôme, Čuchta, Peter, Pedrosa, Ana M. de la, Ferreira, Susana S. D., Fiera, Cristina, Filser, Juliane, Franken, Oscar, Fujii, S., Gagnon Koudji, Essivi, Gao, Meixiang, Gendreau-Berthiaume, Benoit, Gómez-Pamies, Diego F., Greve, Michelle, Handa, I. Tanya, Heiniger, Charlène, Holmstrup, Martin, Homet, Pablo, Ivask, Mari, Janion-Scheepers, C., Jochum, Malte, Joimel, Sophie, Jorge, Bruna Claudia S., Jucevica, Edite, Ferlian, Olga, Oliveira Filho, Luís Carlos I., Klauberg-Filho, Osmar, Baretta, Dilmar, Krab, Eveline J., Kuu, Annely, de Lima, Estevam C. A., Lin, Dunmei, Lindo, Zoë, Liu, Amy, Lu, Jing-Zhong, Luciánez Sánchez, Mª J., Marx, Michael T., McCary, Matthew A., Minor, María A., Nakamori, Taizo, Negri, Ilaria, Ochoa-Hueso, Raúl, Palacios-Vargas, José, Pollierer, Melani M., Querner, Pascal, Raschmanová, Natália, Rashid, Muhammad Imtiaz, Raymond-Léonard, Laura J., Rousseau, Laurent, Saifutdinov, Ruslan, Salmon, Sandrine, Sayer, Emma J., Scheunemann, Nicole, Scholz, Cornelia, Seeber, Julia, Shveenkova, Yulia B., Stebaeva, Sophya K., Sterzynska, Maria, Sun, Xin, Susanti, Winda I., Taskaeva, Anastasia A., Thakur, Madhav P., Tsiafouli, Maria A., Turnbull, Matthew S., Twala, Mthokozisi N., Uvarov, Alexei V., Vernier, Lisa A., Widenfalk, Lina A., Winck, Bruna, Winkler, Daniel E., Wu, Donghui, and Xie, Zhijing

Abstract

Soil life supports the functioning and biodiversity of terrestrial ecosystems. Springtails (Collembola) are among the most abundant soil arthropods regulating soil fertility and flow of energy through above- and belowground food webs. However, the global distribution of springtail diversity and density, and how these relate to energy fluxes remains unknown. Here, using a global dataset representing 2470 sites, we estimate the total soil springtail biomass at 27.5 megatons carbon, which is threefold higher than wild terrestrial vertebrates, and record peak densities up to 2 million individuals per square meter in the tundra. Despite a 20-fold biomass difference between the tundra and the tropics, springtail energy use (community metabolism) remains similar across the latitudinal gradient, owing to the changes in temperature with latitude. Neither springtail density nor community metabolism is predicted by local species richness, which is high in the tropics, but comparably high in some temperate forests and even tundra. Changes in springtail activity may emerge from latitudinal gradients in temperature, predation and resource limitation in soil communities. Contrasting relationships of biomass, diversity and activity of springtail communities with temperature suggest that climate warming will alter fundamental soil biodiversity metrics in different directions, potentially restructuring terrestrial food webs and affecting soil functioning.

Published
2023

21. Estimating species relative abundances from museum records

Author

Gotelli, Nicholas J., Booher, Douglas B., Urban, Mark C., Ulrich, Werner, Suarez, Andrew V., Skelly, David K., Russell, David J., Rowe, Rebecca J., Rothendler, Matthew, Rios, Nelson, Rehan, Sandra M., Ni, George, Moreau, Corrie S., Magurran, Anne E., Jones, Faith A. M., Graves, Gary R., Fiera, Cristina, Burkhardt, Ulrich, Primack, Richard B., Gotelli, Nicholas J., Booher, Douglas B., Urban, Mark C., Ulrich, Werner, Suarez, Andrew V., Skelly, David K., Russell, David J., Rowe, Rebecca J., Rothendler, Matthew, Rios, Nelson, Rehan, Sandra M., Ni, George, Moreau, Corrie S., Magurran, Anne E., Jones, Faith A. M., Graves, Gary R., Fiera, Cristina, Burkhardt, Ulrich, and Primack, Richard B.

Abstract

Dated, geo-referenced museum specimens are a rich data source for reconstructing species' distribution and abundance patterns. However, museum records are potentially biased towards over-representation of rare species, and it is unclear whether museum records can be used to estimate relative abundance in the field. We assembled 17 coupled field and museum datasets to quantitatively compare relative abundance estimates with the Dirichlet distribution. Collectively, these datasets comprise 73,039 museum records and 1,405,316 field observations of 2,240 species. Although museum records of rare species overestimated relative abundance by 1-fold to over 100-fold (median study = 9.0), the relative abundance of species estimated from museum occurrence records was strongly correlated with relative abundance estimated from standardized field surveys (r2 range of 0.10–0.91, median study = 0.43). These analyses provide a justification for estimating species relative abundance with carefully curated museum occurrence records, which may allow for the detection of temporal or spatial shifts in the rank ordering of common and rare species.

Published
2023

22. Soil Biodiversity Data Warehouse Supporting Soil Health Assessment

Author

Paul Henning Krogh, Russell, David J., Photini Mylona, Lourdes Morillas Viñuales, Jiří Schlaghamerský, Maria Tsiafouli, Mickaël Hedde, Ismael Navas-Delgado, Marjetka Suhadolc, Marko Debeljak, Žaklina Marjanović, Davorka Hackenberger, Jérôme Cortet, Anton Potapov, Vesna Tunguz, Stephan Jänsch, Zaytsev, Andrey S., Achim Schmalenberger, and Stephan Lesch

Published
2023

27. Globally invariant metabolism but density-diversity mismatch in springtails

Author

Potapov, Anton M., primary, Guerra, Carlos A., additional, van den Hoogen, Johan, additional, Babenko, Anatoly, additional, Bellini, Bruno C., additional, Berg, Matty P., additional, Chown, Steven L., additional, Deharveng, Louis, additional, Kováč, Ľubomír, additional, Kuznetsova, Natalia A., additional, Ponge, Jean-François, additional, Potapov, Mikhail B., additional, Russell, David J., additional, Alexandre, Douglas, additional, Alatalo, Juha M., additional, Arbea, Javier I., additional, Bandyopadhyay, Ipsa, additional, Bernava, Verónica, additional, Bokhorst, Stef, additional, Bolger, Thomas, additional, Castaño-Meneses, Gabriela, additional, Chauvat, Matthieu, additional, Chen, Ting-Wen, additional, Chomel, Mathilde, additional, Classen, Aimee T., additional, Cortet, Jerome, additional, Čuchta, Peter, additional, de la Pedrosa, Ana Manuela, additional, Ferreira, Susana S. D., additional, Fiera, Cristina, additional, Filser, Juliane, additional, Franken, Oscar, additional, Fujii, Saori, additional, Koudji, Essivi Gagnon, additional, Gao, Meixiang, additional, Gendreau-Berthiaume, Benoit, additional, Gomez-Pamies, Diego F., additional, Greve, Michelle, additional, Handa, I. Tanya, additional, Heiniger, Charlène, additional, Holmstrup, Martin, additional, Homet, Pablo, additional, Ivask, Mari, additional, Janion-Scheepers, Charlene, additional, Jochum, Malte, additional, Joimel, Sophie, additional, Jorge, Bruna Claudia S., additional, Jucevica, Edite, additional, Iuñes de Oliveira Filho, Luís Carlos, additional, Klauberg-Filho, Osmar, additional, Baretta, Dilmar, additional, Krab, Eveline J., additional, Kuu, Annely, additional, de Lima, Estevam C. A., additional, Lin, Dunmei, additional, Liu, Amy, additional, Lu, Jing-Zhong, additional, Luciañez, María José, additional, Marx, Michael T., additional, McCary, Matthew M., additional, Minor, Maria A., additional, Nakamori, Taizo, additional, Negri, Ilaria, additional, Ochoa-Hueso, Raúl, additional, Palacios-Vargas, José G., additional, Pollierer, Melanie M., additional, Querner, Pascal, additional, Raschmanová, Natália, additional, Rashid, Muhammad Imtiaz, additional, Raymond-Léonard, Laura J., additional, Rousseau, Laurent, additional, Saifutdinov, Ruslan A., additional, Salmon, Sandrine, additional, Sayer, Emma J., additional, Scheunemann, Nicole, additional, Scholz, Cornelia, additional, Seeber, Julia, additional, Shveenkova, Yulia B., additional, Stebaeva, Sophya K., additional, Sterzynska, Maria, additional, Sun, Xin, additional, Susanti, Winda I, additional, Taskaeva, Anastasia A., additional, Thakur, Madhav P., additional, Tsiafouli, Maria A., additional, Turnbull, Matthew S., additional, Twala, Mthokozisi N., additional, Uvarov, Alexei V., additional, Venier, Lisa A., additional, Widenfalk, Lina A., additional, Winck, Bruna R., additional, Winkler, Daniel, additional, Wu, Donghui, additional, Xie, Zhijing, additional, Yin, Rui, additional, Zeppelini, Douglas, additional, Crowther, Thomas W., additional, Eisenhauer, Nico, additional, and Scheu, Stefan, additional

Published
2022
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29. High Resolution Ion Mobility Enables the Structural Characterization of Atropisomers of GDC-6036, a KRAS G12C Covalent Inhibitor.

Author

Varona M, Dobson DP, Napolitano JG, Thomas R, Ochoa JL, Russell DJ, and Crittenden CM

Abstract

GDC-6036 is a covalent KRAS G12C inhibitor that demonstrates high potency and selectivity. Structurally, GDC-6036 consists of several motifs that make the analytical characterization of this molecule challenging, including a highly basic pyrrolidine motif bonded to a quinazoline ring via an ether bond and an atropisomeric carbon-carbon bond between functionalized pyridine and quinazoline groups. Structurally, the desired atropisomer was synthesized via an atroposelective Negishi coupling with very high yield. However, having a direct way to analyze and confirm the presence of the atropisomeric species remained challenging in routine analytical workflows. In this study, both variable temperature nuclear magnetic resonance (VT-NMR) and two different approaches of in-line ion mobility coupled to liquid chromatography mass spectrometry (LC-MS) workflows were evaluated for the characterization of GDC-6036 and its undesired atropisomer (Compound B) to support synthetic route development. Briefly, both VT-NMR and traveling wave ion mobility spectrometry (TWIMS) enabled by structures for lossless ion manipulation (SLIM) technology coupled to high resolution MS (HRMS) are able to elucidate the structures of the atropisomers in a complex mixture. Drift tube IMS (DTIMS) was also evaluated, but lacked the resolving power to demonstrate separation between the two species in a mixture, but did show slight differences in their arrival times when multiplexed and injected separately. The determined resolving power ( R p ) by multiplexing the ions via DTIMS was 67.3 and 60.5 for GDC-6036 and Compound B, respectively, while the two peak resolving power ( R pp ) was determined to be 0.41, indicating inadequate resolution between the two species. Alternatively, the SLIM-IM studies showed R p of 103.8 and 99.4, with a R pp of 2.64, indicating good separation between the atropisomers. Furthermore, the CCS/z for GDC-6036 and Compound B was determined to be 231.2 Å 2 /z and 235.0 Å 2 /z, respectively. Quantitative experiments demonstrate linearity ( R 2 >0.99) for both GDC-6036 and Compound B while maintaining separation via SLIM-IM. Spike recoveries of one atropisomer relative to the other yielded strong recoveries (98.7% to 102.5%) while maintaining reproducibility (<7% RSD). The study herein describes the analytical process for evaluating new technologies and strategies for implementation in routine biopharmaceutical characterization workflows.

Published
2024
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