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4 results on '"Nyambo, Thomas B."'

2. Additional file 1 of The genetic and evolutionary basis of gene expression variation in East Africans

Author

Kelly, Derek E., Ramdas, Shweta, Ma, Rong, Rawlings-Goss, Renata A., Grant, Gregory R., Ranciaro, Alessia, Hirbo, Jibril B., Beggs, William, Yeager, Meredith, Chanock, Stephen, Nyambo, Thomas B., Omar, Sabah A., Woldemeskel, Dawit, Belay, Gurja, Li, Hongzhe, Brown, Christopher D., and Tishkoff, Sarah A.

Abstract

Additional file 1: Fig S1. Principal Component Analysis of East African and 1000 Genome Project. Fig S2. ADMIXTURE analysis across K values 2-12. Fig S3. Genomic context of tQTLs. Fig S4. π1 of eQTL p-values of SNP-gene pairs ascertained as sQTLs. Fig S5. π1 between sQTLs and eQTLs across gene length deciles. Fig S6. π1 value of ascertained eQTLs and sQTLs in GTEx. Fig S7. Mapping statistics from STAR. Fig S8. Frequency and LD differences between African samples and 1000 Genomes EURpopulations. Fig S9. tQTL effect size vs MAF. Fig S10. Fraction of FST outliers among eQTLs and sQTLs compared with matched background. Fig S11. Population-specific FST outliers. Fig. S12. Global frequencies of SNPs associated with pigmentation variation and TMEM216 expression and splicing. Fig S13. Colocalization of Mursi PBS and d-statistics with TMEM216 eQTLs. Fig S14. Colocalization of Mursi PBS and d-statistics with pigmentation GWAS. Fig S15. eQTL associations for TMEM216 across populations. Fig S16. ‘LocusCompare’ plots of African pigmentation GWAS and GTEx v8 eQTLs. Fig S17. ‘LocusCompare’ plots of African pigmentation GWAS and GTEx v8 sQTLs.

Published
2023
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3. Additional file 3 of The genetic and evolutionary basis of gene expression variation in East Africans

Author

Kelly, Derek E., Ramdas, Shweta, Ma, Rong, Rawlings-Goss, Renata A., Grant, Gregory R., Ranciaro, Alessia, Hirbo, Jibril B., Beggs, William, Yeager, Meredith, Chanock, Stephen, Nyambo, Thomas B., Omar, Sabah A., Woldemeskel, Dawit, Belay, Gurja, Li, Hongzhe, Brown, Christopher D., and Tishkoff, Sarah A.

Abstract

Additional file 3. Reviewhistory.

Published
2023
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4. 1284-P: Genetic and Lifestyle Associations with Cardiometabolic Traits and Diabetes Risk Factors in Ethnically Diverse Africans

Author

HUI, DANIEL, primary, HARRIS, DANIEL, additional, MCQUILLAN, MICHAEL, additional, HANSEN, MATTHEW, additional, RANCIARO, ALESSIA, additional, BEGGS, WILLIAM, additional, MPOLOKA, SUNUNGUKO W., additional, WOLDEMESKEL, DAWIT, additional, NJAMNSHI, ALFRED K.K., additional, NYAMBO, THOMAS B., additional, CHANOCK, STEPHEN, additional, and TISHKOFF, SARAH A., additional

Published
2022
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