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The crustacean family Ampithoidae is one of the most abundant invertebrate families associated with macroalgae in shallow marine waters. Ampithoe, the largest genus, was previously documented as non‐monophyletic by phylogenetic analyses based on morphological and molecular characters. Here, we reconstructed a multi‐gene phylogeny of Ampithoidae with the first data of the southwestern Atlantic Ocean. We performed the first biogeographic analyses for the family, which indicated its origin in the Indo‐West Pacific, with subsequent dispersion to the Atlantic Ocean around the Eocene. Divergence times suggest that the diversification of Ampithoidae is congruent with the brown algae crown radiation, which allowed the colonization of new environments. [ABSTRACT FROM AUTHOR]

ABSTRACT Aim Location Taxon Methods Results Main Conclusions Several lines of evidence have noted that open vegetation biomes in the Neotropics are younger than moist forests, leading us to question which historical processes shaped the current species distribution patterns in these new biome formations. Here we investigate the temporal patterns of speciation and colonisation from surrounding biomes (Amazonia, Atlantic Forest and Cerrado) in the Caatinga historical assembly of squamate species, to understand the role of geomorphological events and climate change in driving its diversification.Neotropics.Squamata (snakes, lizards and amphisbaenians).We used a phylogenetic tree and occurrence data for 459 squamate species distributed throughout four different biomes (Amazonia, Atlantic Forest, Cerrado and Caatinga) to reconstruct ancestral geographic ranges using the R package BioGeoBEARS. We used BAMM to estimate the rates of species diversification.Our results indicate that the current diversity patterns of squamates in the Caatinga were a result of pervasive faunal exchanges from adjacent biomes since the Paleogene, with similar numbers of dispersal events in each source area. The Neogene period was determinant in the diversification process, leading to the current assembly patterns of this group in the Caatinga.The landscape transformation and climate change that increased aridity in northeastern Brazil probably shaped the diversification of dry‐adapted squamates in the Caatinga, like tropidurid lizards. However, the Pleistocene climatic fluctuations associated with the highly heterogeneous gradients of topography, geology, soils, climatic conditions, and different vegetation physiognomies could have facilitated faunal exchange with their neighbouring forested biomes, explaining the current presence of some typical forested lineages inside the Caatinga domain and help us to clarify the current distribution patterns of squamates in this region. [ABSTRACT FROM AUTHOR]

Gymnophthalmids are a diverse lineage of Neotropical lizards that present challenges in the understanding of their phylogenetic relationships and biogeographic history. Using a densely sampled phylogeny and distribution data, we investigated their biogeography at the family level. Dividing South and Central America into 12 regions, we tested six biogeographic models considering dispersal-extinction, vicariance, and founder events. Our analysis revealed high taxonomic and phylogenetic endemism in the Andes, Amazon, and Guiana Shield. The best-fit model identified the Guiana Shield as the likely ancestral area of the family, with dispersal events dominating over vicariance. Key areas for species interchange were the Amazon, Northern Andes, and Guiana Shield. The core regions of diversification included the Andes, Amazon, and Guiana Shield, with elevated species richness and biotic interchange events during the Eocene and Oligocene. The Guiana Shield stood out as a stronghold of gymnophthalmid diversity, driven by dispersal rates and ancient lineages. Our findings challenge previous hypotheses about the diversification of these lizards, suggesting a colonization pattern from lowlands to high elevations rather than the South-to-North Speciation Hypothesis for Andean lineages. [ABSTRACT FROM AUTHOR]

ABSTRACT Mechanisms driving the spatial and temporal patterns of species distribution in the Earth's largest habitat, the deep ocean, remain largely enigmatic. The late Miocene to the Pliocene (~23–2.58 Ma) is a period that was marked by significant geological, climatic, and oceanographic changes. This transitional period spurred widespread species diversification, particularly among widely distributed benthic scavengers, such as amphipods. Here, we take step toward understanding the long‐term evolutionary processes of amphipod colonization and diversification in the deep ocean by focusing on the model genus Eurythenes S. I. Smith in Scudder, 1882. These large‐bodied scavengers play key roles in benthic communities. We constructed a time‐calibrated phylogeny using two mitochondrial DNA genes by analyzing publicly available data on 14 species of Eurythenes across a global depth range from 839 to 8081 m. The resulting phylogenetic tree reveals a diverse clade, with a common ancestor originating around 11.81 Ma. A gradual increase in the effective population size of Eurythenes was observed, particularly during the Pliocene (~4 Ma). The net diversification rate remained almost constant, with slight increases between the Miocene and Pliocene (~8–4 Ma), and most new species appeared during the latter period. Additionally, reconstruction of the ancestral area suggested that the common ancestor of Eurythenes had a global distribution. A combination of dispersal and sympatric processes, along with environmental factors, such as changes in ocean temperature and sea level, contributed to the present biogeographic distribution of these species. Our findings highlight the importance of historical events, such as plate tectonics and changes in deep‐water circulation, in driving the rapid speciation of Eurythenes and underscore their essential role in shaping deep‐ocean biodiversity.

Pinnipeds (seals, sea lions, walruses, and their fossil relatives) are one of the most successful mammalian clades to live in the oceans. Despite a well-resolved molecular phylogeny and a global fossil record, a complete understanding of their macroevolutionary dynamics remains hampered by a lack of formal analyses that combine these 2 rich sources of information. We used a meta-analytic approach to infer the most densely sampled pinniped phylogeny to date (36 recent and 93 fossil taxa) and used phylogenetic paleobiological methods to study their diversification dynamics and biogeographic history. Pinnipeds mostly diversified at constant rates. Walruses, however, experienced rapid turnover in which extinction rates ultimately exceeded speciation rates from 12 to 6 Ma, possibly due to changing sea levels and/or competition with otariids (eared seals). Historical biogeographic analyses, including fossil data, allowed us to confidently identify the North Pacific and the North Atlantic (plus or minus Paratethys) as the ancestral ranges of Otarioidea (eared seals + walrus) and crown phocids (earless seals), respectively. Yet, despite the novel addition of stem pan-pinniped taxa, the region of origin for Pan-Pinnipedia remained ambiguous. These results suggest further avenues of study in pinnipeds and provide a framework for investigating other groups with substantial extinct and extant diversity. [ABSTRACT FROM AUTHOR]

Fruit flies (Tephritidae: Dacini) are a frugivorous insect group that exhibit high endemic diversity in the rainforests of Australia and the western Pacific. In this region, biogeography has been influenced by tectonic plate movements and cycles of isolation and re‐connection of landmasses and rainforest habitats during glacial periods. However, how such factors have influenced the speciation and historical dispersal of the regional Dacini is largely unknown. To address this, we use a dated phylogeny to reconstruct the biogeographical history of the tribe. We found the Dacini radiated eastward into the Pacific islands largely from sources in New Guinea. We also found evidence for historical dispersal from both Australia and New Guinea into New Caledonia, a pathway unique to this island compared with neighbouring islands. There was also evidence for multiple, bidirectional dispersal events between Papua New Guinea and Australia, likely facilitated by the cyclically exposed Torres Strait land bridge. Cape York in far northern Australia was likely the only entry point for species dispersing into Australia; there was no evidence for entry of flies into Australia directly from West Papua or Wallacea. Several lineages radiated after entering Australia, such as members of the Bactrocera dorsalis species group. Within Australia, speciation was not associated with the biogeographic barriers known to have impacted other rainforest fauna in eastern Australia. Overall, we demonstrate that isolation between islands and large landmasses is important in the evolution of the Australo‐Pacific Dacini, but the reason for their extensive radiation within Australia and Papua New Guinea remains unclear. [ABSTRACT FROM AUTHOR]

Aim: Shifts in diversification rates of Australian flora and fauna have been associated with aridification, but the relationship between diversification rates and aridity has never been quantified. We employed multiple approaches to reconstruct paleoenvironments of Australia for the first time. We used this information, and phylogenetic‐based analyses, to explore how changes in temperature and increasing aridity during the Neogene influenced the diversification of the Australian blindsnakes. We tested whether diversification rates differ between arid‐adapted and mesic‐adapted lineages. Taxon: Typhlopidae, Anilios blindsnakes. Location: Australia. Materials and Methods: We estimated the historical biogeography of blindsnakes using BioGeoBEARS. We synthesised multiple approaches to reconstruct paleotemperature and paleoaridity of Australia during the Neogene. We fitted several birth‐death models and estimated diversification rates under paleoenvironmental conditions using RPANDA. We further compared diversification rates between arid‐adapted lineages versus mesic‐adapted lineages using ClaDS and GeoHiSSE. Results: Ancestral area estimation indicated Australian blindsnakes have tropical grassland origins. We found that Australia‐specific regional paleotemperature and paleoaridity provided a better explanation for diversification rate variation than global paleotemperature. Specifically, our best‐fitting model indicated that speciation rates of blindsnakes decreased with increasing aridity. We found no difference in diversification rates between arid‐ and mesic‐adapted lineages. Main Conclusions: Soon after dispersing to Australia, the common ancestors of Australian blindsnakes diversified rapidly in mesic habitats during the early Miocene. However, as the continent became increasingly arid, diversification rates decreased. We found that shifts in the environment led to the emergence of two major clades: one remaining in primarily mesic habitats and the other adapting to the expanding arid biome. Our results emphasise the importance of both arid and tropical biomes as sources and sinks of diversification. [ABSTRACT FROM AUTHOR]

Aim: Although New Caledonia (NC) is now considered an oceanic island that emerged ca. 60 Ma, a few terrestrial clades are significantly older, raising the question of the origin of these groups. Classically, old lineages on more recent islands are hypothesized to originate through a process of hopping on now‐vanished islands (i.e., island‐hopping hypothesis) or other territories. We aim to test this hypothesis by studying a group of cockroaches with several lineages found in NC. Location: New Caledonia, New Zealand, Australia. Taxon: Insects: Blattodea. Methods: We generated a dated phylogeny for blattid cockroaches (Blattidae and Tryonicidae) using Bayesian inference along with fossil calibrations. We reviewed studies on the palaeogeography of the Southwest Pacific region, including hypotheses about the existence of yet‐to‐be‐discovered past islands, and constructed biogeographical tests accordingly. We computed ancestral area estimation under different models in BioGeoBEARS (DEC, BAYAREALIKE, DIVALIKE, with or without +J) to test the role of an island‐hopping hypothesis in the establishment of NC blattid fauna. Results: We find divergence times older than 60 Ma for two NC clades. We show that these 'old' endemic lineages can partially be explained by indirect dispersal from Australia or New Zealand through now disappeared islands. Alternative hypotheses suggest multiple independent colonizations of NC from Antarctica or Australia. Main Conclusions: Our results indicate that island‐hopping may explain the presence of old groups in NC. The island‐hopping hypothesis is nonetheless only supported for a period‐area from which geological evidence is ambiguous. Our work highlights both the fruitful interactions between geology and biogeography and the underlying difficulties. The multiple colonization events inferred for NC provide additional insights into the composite nature of NC biota. [ABSTRACT FROM AUTHOR]

Extant neosuchian crocodiles are represented by only 24 taxa that are confined to the tropics and subtropics. However, at other intervals during their 200 Myr evolutionary history the clade reached considerably higher levels of species-richness, matched by more widespread distributions. Neosuchians have occupied numerous habitats and niches, ranging from dwarf riverine forms to large marine predators. Despite numerous previous studies, several unsolved questions remain with respect to their biogeographic history, including the geographical origins of major groups, e.g. Eusuchia and Neosuchia itself. We carried out the most comprehensive biogeographic analysis of Neosuchia to date, based on a multivariate K-means clustering approach followed by the application of two ancestral area estimation methods (BioGeoBEARS and Bayesian ancestral location estimation) applied to two recently published phylogenies. Our results place the origin of Neosuchia in northwestern Pangaea, with subsequent radiations into Gondwana. Eusuchia probably emerged in the European archipelago during the Late Jurassic/Early Cretaceous, followed by dispersals to the North American and Asian landmasses. We show that putative transoceanic dispersal events are statistically significantly less likely to happen in alligatoroids. This finding is consistent with the saltwater intolerant physiology of extant alligatoroids, bolstering inferences of such intolerance in their ancestral lineages.

Anuran amphibians have intensively been studied to understand Amazonian biodiversity. Improved methods and sampling has revealed that many widespread nominal species in fact are complexes of species with smaller allopatric ranges. Pan-Amazonian anuran species are rather an exception. In a case study using the three-striped poison frog (Anura: Dendrobatidae: Ameerega trivittata), we ask how the pan-Amazonian distribution of this taxon can be explained and hypothesize that dispersal has played a major role. Species delimitation and intraspecific relationships of the study species were examined from novel and existing (GenBank) sequences of the mitochondrial 16S rRNA gene from 108 specimens of 38 localities using maximum likelihood and Bayesian methods. We performed BioGeoBEARS models using a time-calibrated population tree to reconstruct the biogeographic history. Our results support that A. trivittata is a pan-Amazonian species scattered over its geographic range. Being of Late Miocene origin, the species rapidly spread into newly available space and repeatedly dispersed for-and backward, while vicariance played a major role only in the Early Pliocene. We suggest that intrinsic morphological and life history characteristics (adult size, relative reproductive success) make A. trivittata a more successful disperser than other species, so that riverine barriers are more permeable and hamper allopatric speciation. We conclude that there is no universal causality explaining Amazonia biodiversity, because species-specific biological characteristics are key determents of biogeographical histories. Comparatively better dispersal advantages foster larger geographic ranges and can explain pan-Amazonian distributions. [ABSTRACT FROM AUTHOR]

Nemognathinae is the most widespread subfamily of Meloidae, with ~600 species, and includes the only blister beetles distributed in Australia and on islands of the western Pacific. Four tribes are recognised based on morphology: Stenoderini, Palaestrini, Horiini and Nemognathini. Using two mitochondrial (16S , COI) and three nuclear markers (CAD , 28S , ITS2), and both maximum likelihood and Bayesian approaches, this study describes the evolutionary history of Nemognathinae based on molecular data for the first time. We provided a fossil-calibrated phylogeny that unravels the phylogenetic relationships among the tribes and among most of the genera, and a reconstruction of the biogeographic history using a parametric approach. Our results recognised the four tribes that were described previously based on morphology and revealed the presence of another well-differentiated clade corresponding to the genus Zoltanzonitis. Phylogenetic relationships among the tribes are well supported, with Stenoderini as the most ancient lineage, followed by Zoltanzonitini, Palaestrini, Horiini and Nemognathini. A few long-standing genera within Nemognathini (Nemognatha , Zonitis , Stenoria) and the nominate subgenus Stenodera (Stenodera) were recovered as polyphyletic. In addition, biogeographic analyses revealed the origin of the subfamily in the Old World during the Eocene, and the associated diversification into the five tribes astride the Eocene and Oligocene between 46 and 30 Ma. Based on these results we propose the new tribe Zoltanzonitini, and the elevation of the subgenus Pronemognatha to genus level, new status. In addition, Zonitoschema breveapicalis new comb. , Z. curticeps new comb. and Z. pulchella new status are proposed. ZooBank: urn:lsid:zoobank.org:pub:72EECC6D-36A6-4DD7-B4DB-D0692034E775. Nemognathinae is the most widespread Meloidae subfamily, with ~600 species, among which are the only blister beetle species that occur in Oceania. A comprehensive molecular phylogeny for the group is lacking. We investigated the history of this subfamily with a fossil-calibrated molecular approach, revealing the presence of a new tribe, the polyphyly of a few genera and an Eocene origin in the Old World. This work represents the first molecular phylogeny of Nemognathinae and contributes to revealing the evolutionary history of the Meloidae. [ABSTRACT FROM AUTHOR]

Dinosaurs dominated Mesozoic terrestrial ecosystems for ∼160 million years, but their biogeographic origin remains poorly understood. The earliest unequivocal dinosaur fossils appear in the Carnian (∼230 Ma) of southern South America and Africa, leading most authors to propose southwestern Gondwana as the likely center of origin. However, the high taxonomic and morphological diversity of these earliest assemblages suggests a more ancient evolutionary history that is currently unsampled. Phylogenetic uncertainty at the base of Dinosauria, combined with the subsequent appearance of dinosaurs throughout Laurasia in their early evolutionary history, further complicates this picture. Here, we estimate the distribution of early dinosaurs and their archosaurian relatives under a phylogenetic maximum likelihood framework, testing alternative topological arrangements and incorporating potential abiotic barriers to dispersal into our biogeographic models. For the first time, we include spatiotemporal sampling heterogeneity in these models, which frequently supports a low-latitude Gondwanan origin for dinosaurs. These results are best supported when silesaurids are constrained as early-diverging ornithischians, which is likely because this topology accounts for the otherwise substantial ornithischian ghost lineage, explaining the group's absence from the fossil record prior to the Early Jurassic. Our results suggest that the archosaur radiation also took place within low-latitude Gondwana following the end-Permian extinction before lineages dispersed across Pangaea into ecologically and climatically distinct provinces during the Late Triassic. Mesozoic terrestrial vertebrates are under-sampled at low paleolatitudes, and our findings suggest that heterogeneous sampling has hitherto obscured the true paleobiogeographic origin of dinosaurs and their kin., Competing Interests: Declaration of interests The authors declare no competing interests., (Copyright © 2025 The Authors. Published by Elsevier Inc. All rights reserved.)

Some plant lineages remain within the same biome over time (biome conservatism), whereas others seem to adapt more easily to new biomes. The c. 398 species (14 genera) of subfamily Cercidoideae (Leguminosae or Fabaceae) are found in many biomes around the world, particularly in the tropical regions of South America, Asia and Africa, and display a variety of growth forms (small trees, shrubs, lianas and herbaceous perennials). Species distribution maps derived from cleaned occurrence records were compiled and compared with existing biome maps and with the literature to assign species to biomes. Rainforest (144 species), succulent (44 species), savanna (36 species), and temperate (10 species) biomes were found to be important in describing the global distribution of Cercidoideae, with many species occurring in more than one biome. Two phylogenetically isolated species-poor temperate ( Cercis ) and succulent ( Adenolobus ) biome lineages are sister to two broadly distributed species-rich tropical clades. Ancestral state reconstructions on a time-calibrated phylogeny suggest biome shifts occurred throughout the evolutionary history of the subfamily, with shifts between the succulent and rainforest biomes, from the rainforest to savanna, from the succulent to savanna biome, and one early occurring shift into (or from) the temperate biome. Of the 26 inferred shifts in biome, three are closely associated with a shift from the ancestral tree/shrub growth form to a liana or herbaceous perennial habit. Only three of the 13 inferred transcontinental dispersal events are associated with biome shifts. Overall, we find that biome shifts tend to occur within the same continent and that dispersals to new continents tend to occur within the same biome, but that nonetheless the biome-conserved and biogeographically structured Cercidoideae have been able to adapt to different environments through time., Supplementary Information: The online version contains supplementary material available at 10.1007/s40415-024-01058-z., Competing Interests: Conflict of interestThe authors declare no financial or non-financial interests that are directly or indirectly related to the work submitted for publication., (© The Author(s) 2024.)

Aim: In the most widely used family of methods for ancestral range estimation (ARE), dispersal, speciation and extirpation events are estimated from information on extant lineages. However, this approach fails to consider the geographic distribution of extinct species and their position on the phylogenetic tree, an omission that could compromise reconstruction. Here, we present a method that models the geographic distribution of extinct species and we quantify the potential inaccuracy in ancestral range estimation when extinction rates are above zero. Location: Global applications, with an example from the Americas. Taxon: All taxa, with an example from hummingbirds (Amazilia). Methods: Methods capable of explicitly modelling extinct branches along with their reconstructed geographic information (GeoSSE) have been overlooked in ARE analysis, perhaps due to the inherent complexity of implementation. We develop a user‐friendly platform, which we term LEMAD (Lineage Extinction Model of Ancestral Distribution) that generalizes the likelihood described in GeoSSE for any number of areas and under several sets of geographic assumptions. We compare LEMAD and extinction‐free approaches using extensive simulations under different macroevolutionary scenarios. We apply our method to revisit the historical biogeography of Amazilia hummingbirds. Results: We find that accounting for the lineages removed from a tree by extinction improves reconstructions of ancestral distributions, especially when rates of vicariant speciation are higher than rates of in situ speciation, and when rates of extinction and range evolution are high. Rates of in situ and vicariant speciation are accurately estimated by LEMAD in all scenarios. North America as the most likely region for the common ancestor of hummingbirds. Main conclusions: Methods that neglect lineage extinction are less likely to accurately reconstruct true biogeographic histories of extant clades. Our findings on an empirical dataset reconcile the Eurasian origin of Amazilia with biogeographic reconstructions when lineage extinction is considered. [ABSTRACT FROM AUTHOR]

Fouquieriaceae consists of a single genus Fouquieria with eleven species occurring in arid and semiarid regions in Mexico and the southwestern USA. A recently developed phylogeny based on chloroplast DNA sequences provided strong support for the monophyly of the genus and the evolutionary species relationships. However, details of its evolutionary history remain unclear. Due to this uncertainty, additional information such as the evolution on its growth habit, reconstruction of the ancestral habitat, and on chromosome evolution is needed for a clear understanding of its evolutionary history. Different hypotheses concerning the shift of growth habits (succulent or woody) and the occupation of the ancestral habitat, and the chromosomal evolution in the family were analyzed. We assessed the ancestral distribution by fitting different biogeographic models. Our results suggest that Fouquieriaceae may have originated in two regions at the margins of the present geographic distribution of the genus: the Sonoran Desert and desert areas south of the Mexican Transvolcanic Belt. However, our results suggest that the ancestral lineage of Foquieriaceae was originated in desert habitats in central–southern Mexico with a basal chromosome number of n = 12, and a succulent habit, all of which may have allowed the dispersion of polyploid species to newly developed dry environments during the Late Miocene. [ABSTRACT FROM AUTHOR]

Aim: Statistical model comparison has become common in historical biogeography, enabled by the R package BioGeoBEARS, which implements several models in a common framework, allowing models to be compared with standard likelihood‐based methods of statistical model comparison. Ree and Sanmartín (Journal of Biogeography, 45, 741–749, 2018) critiqued the comparison of Dispersal–Extinction–Cladogenesis (DEC) and a modification of it, DEC+J, which adds the process of jump dispersal at speciation. DEC+J provides highly significant improvements in model fit on most (although not all) datasets. They claim that the comparison is statistically invalid for a variety of reasons. I analyse the key claims made by the critique. Location: Simulated data. Taxon: Simulated data. Methods: Likelihood calculations are checked by comparison between programs and by‐hand calculations, and by summing likelihoods across all possible datasets. Model adequacy of DEC versus DEC+J is checked by a simulation/inference experiment. Results: Mistakes in the critique's example likelihood calculations are demonstrated. DEC+J fits better on datasets because the DEC model is statistically inadequate in the common situation when most species have geographical ranges of single areas; the DEC model requires long residence times of multi‐area ranges, and when these are not observed, a model that does produce such data patterns, such as DEC+J, prevails. More fundamentally, statistical comparison of DEC and DEC+J produces identical log‐likelihood differences to statistical comparison of two submodels of ClaSSE where extinction rates are fixed to 0. Main Conclusions: DEC fails a basic model adequacy check for understandable reasons, while DEC+J does not. As Ree and Sanmartín recommend ClaSSE models as valid for comparison, the comparison of DEC and DEC+J is statistically valid according to their own criteria. [ABSTRACT FROM AUTHOR]

Geographically, widespread Neotropical fish lineages offer opportunities to reconstruct historical biogeography patterns and infer processes leading to modern ichthyological diversity and distribution. The characiform family Prochilodontidae is well suited for such reconstruction because their migrations limit population substructure within river systems. Therefore, their biogeographic history should match closely the history of connectivity among Neotropical river basins. Here, we combine a time‐calibrated phylogeny with biogeographic model testing to recover the history of this family's diversification. Results support the Miocene rise of the Andean Eastern Cordillera as a dispersal barrier, but also indicate a much earlier Eocene origin of the trans‐Andean genus Ichthyoelephas. Despite the early origin of the family and its three constituent genera, most prochilodontid lineages originated during the Miocene in Greater Amazonia, likely due to drainage reorganizations caused by Andean uplift. Subsequent speciation appears linked to interbasin exchanges and expansions of Amazonian lineages into Brazilian coastal systems. The modern richness of Prochilodus in easterly drainages appears to be relatively young, with only Prochilodus vimboides likely reaching that region prior to the late Miocene. The rise of the Vaupes Arch coincides with two splits between Orinocoan and Amazonian lineages circa 9 million years ago (Ma). However, two instances of later dispersal between these drainages reveal the permeability of the Vaupes Arch, suggesting that it may promote periodic speciation. This study illustrates how model‐based biogeographic studies of widespread groups can reconstruct historic paths of dispersal and help reveal how landscape evolution promoted modern diversity patterns. [ABSTRACT FROM AUTHOR]

A detailed phylogeny of bumblebees is urgently needed to understand speciation and biogeographic diversification in the Neotropical region. We sequenced autosomal and mtDNA loci from nine Brazilian bumblebee species and compiled it with the data already available to obtain highly resolved phylogenetic trees with fossil-calibrated dates. The ancestral Bombus lineage was estimated to diversify between 47.08 and 34.27 million years ago (Ma) in the Holarctic region, but largely restricted to the eastern Old World. The Neotropical region was initially colonized in the Late Miocene, where bumblebee diversification was shown to be consistent with geologic and climatic events of the Late Cenozoic. Neotropical bumblebees likely originated from Nearctic lineages, which dispersed towards South America after 29 Ma. [ABSTRACT FROM AUTHOR]

Premise: Continental‐scale disjunctions and associated drivers are core research interests in biogeographic studies. Here, we selected a species‐rich Australian plant genus (Calytrix; Myrtaceae) as a case study to investigate these patterns. Species of this endemic Australian starflower genus have a disjunct distribution across the mesic fringes of the continent and are largely absent from the arid center. Methods: We used high‐throughput sequencing to generate unprecedented resolution and near complete species‐level nuclear and plastid phylogenies for Calytrix. BioGeoBEARS and biogeographic stochastic mapping were used to infer ancestral areas, the relative contributions of vicariance and dispersal events, and directionality of dispersal. Results: Present‐day disjunctions in Calytrix are explained by a combination of scenarios: (1) retreat of multiple lineages from the continental center to the more mesic fringes as Australia became progressively more arid, with subsequent extinction in the center as well as (2) origination of ancestral lineages in southwestern Australia (SWA) for species‐rich clades. The SWA biodiversity hotspot is a major diversification center and the most common source area of dispersals, with multiple lineages originating in SWA and subsequently spreading to the adjacent arid Eremaean region. Conclusions: Our results suggest that major extinction, as a result of cooling and drying of the Australian continent in the Eocene–Miocene, shaped the present‐day biogeography of Calytrix. We hypothesize that this peripheral vicariance pattern, which is similar to the African Rand flora, may explain the disjunctions of many other Australian plant groups. Further studies with densely sampled phylogenies are required to test this hypothesis. [ABSTRACT FROM AUTHOR]

Aim: Phenotypes promoting dispersal over ecological timescales may have macroevolutionary consequences, such as long‐distance dispersal and diversification. However, whether dispersal traits explain the distribution of pantropical plant groups remains unclear. Here we reconstruct the biogeographical history of a tree clade to assess whether seed dispersal traits and biome‐switching explain the clade's pantropical distribution. Location: Pantropical. Taxon: The Pterocarpus clade (Leguminosae/Fabaceae). Methods: We sequenced 303 nuclear loci using target capture and generated a time‐calibrated phylogenomic tree. We also generated a corroborative time‐calibrated phylogenetic tree from data‐mined Sanger‐sequencing data. We then collated distribution data and seed dispersal morphology traits to compare trait‐dependent and trait‐independent biogeographical models, allowing us to infer whether dispersal traits influenced Pterocarpus' spatio‐temporal evolution. Finally, using the results of these model tests, we estimated the ancestral ranges and biomes of Pterocarpus species to better understand their biogeographical history, and assessed the degree and direction of biome‐switching over the course of their diversification. Results: We recovered well‐supported phylogenetic relationships within Pterocarpus, within which there were two subclades – one neotropical and the other palaeotropical. Our divergence date estimates suggested that Pterocarpus diversified from around 12 Ma, during the Miocene. Trait‐dependent biogeographical models were rejected for both range and biome evolution within Pterocarpus, but models including dispersal were supported. Pterocarpus' ancestral node shared a range across the new‐world and old‐world tropics, followed by divergence into palaeotropical and neotropical clades. Biome‐switching occurred most frequently into rainforest and grassland. Main conclusions: Our analyses suggest that Pterocarpus underwent infrequent cross‐continental dispersal and establishment into novel biomes. While this was minimally impacted by seed dispersal traits, biome‐switching following long‐distance dispersal and climate change have played an important role in diversification within Pterocarpus since the Miocene. Indeed, rare events of long‐distance dispersal likely explain the wide distributions of many pantropical plant species. [ABSTRACT FROM AUTHOR]

The biogeographic histories of two cosmopolitan groups of Olenida: Hypermecaspididae and Parabolinella (Olenidae) are studied herein. Different biogeographical models were compared, and the results were discussed in a palaeogeographic and palaeoceanographic context. Dispersal pathways were proposed for both groups, identifying potential environmental factors that affected their distribution. Calibrated phylogenetic hypotheses for each taxon were used to compare different models of geographical evolution with R package BioGeoBEARS. Time-stratified analyses were carried out, using different distance matrices, for three intervals (Furongian, Early Ordovician and Middle Ordovician). Numbers and types of biogeographical events were estimated under the best-fitting models by using Biogeographic Stochastic Mapping (BSM). For both groups, the best-fit model incorporated jump dispersal, indicating that this was an important speciation strategy. Vicariance was unimportant for these trilobites, which would have been favoured by the stable conditions of their habitat. Ocean currents were key in the dispersal patterns of Parabolinella , but not in those of Hypermecaspididae. The main strategy used for both groups would have been "island hopping", taking advantage of the microterranes and volcanic island arc chains surrounding Laurentia, Baltica, Avalonia, and Gondwana. Creeping also operated as a dispersal mechanism in Parabolinella. This genus originated in the late Miaolingian, when the more uniform sea conditions would have favoured its dispersal capabilities. On the other hand, Hypermecaspididae diversified mainly in the Early Ordovician, when cooling seas and changes in ocean circulation patterns generated more segmented habitats, affecting chances of dispersal, and favouring jump-founder events. Despite these differences, in both clades founder and dispersal events were more abundant from the western margin of Gondwana, which constituted an important dispersal centre during the Furongian and Early Ordovician. • Founder events were key in the evolution of Parabolinella and Hypermecaspidids. • No barriers affected the dispersal of these taxa in the Furongian-Early Ordovician. • Ocean currents allow explaining the dispersal patterns of Parabolinella. • Climate changes during hypermecaspidids early evolution favoured jump-founder events. • Central Andean Basin worked as a dispersal centre during Furongian-Early Ordovician. [ABSTRACT FROM AUTHOR]