90 results on '"Barros, E.M."'
Search Results
2. Tumor Antigens beyond the Human Exome.
- Author
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Emilius, Lisabeth, Bremm, Franziska, Binder, Amanda Katharina, Schaft, Niels, and Dörrie, Jan
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TUMOR antigens ,SOMATIC mutation ,ALTERNATIVE RNA splicing ,CANCER cells ,IMMUNOTHERAPY - Abstract
With the advent of immunotherapeutics, a new era in the combat against cancer has begun. Particularly promising are neo-epitope-targeted therapies as the expression of neo-antigens is tumor-specific. In turn, this allows the selective targeting and killing of cancer cells whilst healthy cells remain largely unaffected. So far, many advances have been made in the development of treatment options which are tailored to the individual neo-epitope repertoire. The next big step is the achievement of efficacious "off-the-shelf" immunotherapies. For this, shared neo-epitopes propose an optimal target. Given the tremendous potential, a thorough understanding of the underlying mechanisms which lead to the formation of neo-antigens is of fundamental importance. Here, we review the various processes which result in the formation of neo-epitopes. Broadly, the origin of neo-epitopes can be categorized into three groups: canonical, noncanonical, and viral neo-epitopes. For the canonical neo-antigens that arise in direct consequence of somatic mutations, we summarize past and recent findings. Beyond that, our main focus is put on the discussion of noncanonical and viral neo-epitopes as we believe that targeting those provides an encouraging perspective to shape the future of cancer immunotherapeutics. [ABSTRACT FROM AUTHOR]
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- 2024
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3. Optimized Feeding Strategies for Biosurfactant Production from Acetate by Alcanivorax borkumensis SK2.
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Karmainski, Tobias, Lipa, Marie K., Kubicki, Sonja, Bouchenafa, Amina, Thies, Stephan, Jaeger, Karl-Erich, Blank, Lars M., and Tiso, Till
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SUSTAINABILITY ,BIOMASS production ,SUSTAINABLE development ,BIOSURFACTANTS ,ACETIC acid ,LIGNOCELLULOSE ,ACETATES - Abstract
Biosurfactants are much-discussed alternatives to petro- and oleochemical surfactants. Alcanivorax borkumensis, a marine, Gram-negative γ-proteobacterium, produces a glycine-glucolipid biosurfactant from hydrocarbons, pyruvate, and acetate as carbon sources. Sustainable acetate production from lignocellulose or syngas adds to its relevance for the bioeconomy. This study investigated nitrogen sources and carbon-to-nitrogen ratios (C/N) to optimize fed-batch fermentation for biosurfactant production using A. borkumensis with acetate as the carbon source. Urea enabled high biosurfactant production, which was confirmed in DO-based fed-batch fermentation. Varying C/N ratios led to increased glycine-glucolipid production and decreased biomass production, with improvement plateauing at a C/N ratio of 26.7 Cmol Nmol
−1 . pH-stat fed-batch fermentation using glacial acetic acid as the carbon source and a pH-adjusting agent doubled the biosurfactant production. Finally, bubble-free membrane aeration was used to prevent extensive foam formation observed during conventional bubble aeration. The efficient production made it possible to investigate the bioactivity of glycine-glucolipid in combination with antibiotics against various microorganisms. Our findings allow for the leverage of glycine-glucolipid biosurfactant production using acetate as a carbon source. [ABSTRACT FROM AUTHOR]- Published
- 2024
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4. Molecular Epidemiology of Carbapenem-Resistant Klebsiella aerogenes in Japan.
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Takei, Kentarou, Ogawa, Miho, Sakata, Ryuji, and Kanamori, Hajime
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MOBILE genetic elements ,WHOLE genome sequencing ,GENETIC testing ,INTEGRONS ,HEALTH facilities ,MOLECULAR epidemiology ,CARBAPENEM-resistant bacteria - Abstract
Information regarding Klebsiella aerogenes haboring carbapenemase in Japan is limited. A comprehensive nationwide survey was conducted from September 2014 to December 2022, and 67 non-duplicate strains of carbapenem-resistant K. aerogenes were isolated from 57 healthcare facilities in Japan. Through genetic testing and whole-genome sequencing, six strains were found to possess carbapenemases, including imipenemase (IMP)-1, IMP-6, New Delhi metallo-β-lactamase (NDM)-1, and NDM-5. The strain harboring bla
NDM-5 was the novel strain ST709, which belongs to the clonal complex of the predominant ST4 in China. The novel integron containing blaIMP-1 featured the oxacillinase-101 gene, which is a previously unreported structure, with an IncN4 plasmid type. However, integrons found in the strains possessing blaIMP-6 , which were the most commonly identified, matched those reported domestically in Klebsiella pneumoniae, suggesting the prevalence of identical integrons. Transposons containing blaNDM are similar or identical to the transposon structure of K. aerogenes harboring blaNDM-5 previously reported in Japan, suggesting that the same type of transposon could have been transmitted to K. aerogenes in Japan. This investigation analyzed mobile genetic elements, such as integrons and transposons, to understand the spread of carbapenemases, highlighting the growing challenge of carbapenem-resistant Enterobacterales in Japan and underscoring the critical need for ongoing surveillance to control these pathogens. [ABSTRACT FROM AUTHOR]- Published
- 2024
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5. Susceptibility of Fall Armyworm Field Populations to Vip3Aa/Cry Bt Maize in a Tropical Agricultural Region.
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Silva, Alisson Franco T., Silva, Luciana B., Malaquias, José B., Salustino, Angélica S., Correia Neto, Domingos Francisco, Pacheco, Daniel M., Fragoso, Daniel B., and Pereira, Eliseu J. G.
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FALL armyworm ,AGRICULTURE ,COTTON ,FIELD crops ,BACILLUS thuringiensis ,BT cotton ,SURVIVAL rate ,CORN - Abstract
Fall armyworm (FAW, Spodoptera frugiperda) is a polyphagous and migratory lepidopteran pest insect in field crops and is notoriously invasive worldwide. In large portions of the Americas, its populations are managed using transgenic maize or cotton varieties producing insecticidal proteins from Bacillus thuringiensis (Bt), primarily Vip3Aa pyramided with Cry Bt proteins. We determined the susceptibility of FAW field populations from locations pressured with such maize hybrids for over five years. We used time–mortality bioassays with F
1 third-instar larvae of six geographically distinct populations collected in maize fields of a tropical agricultural region encompassing four Brazilian states. We maintained the neonate progeny from the field populations on an artificial diet until the third instar, and then determined their survival curves on the foliage of three Vip3Aa/Cry-producing Bt maize hybrids. Death of the mid-size, third-instar FAWs occurred relatively rapidly, with larval mortality rates reaching 98–100% in less than five days regardless of Bt maize hybrid. However, median survival time (ST50 ) for the larvae differed among the populations, with the lowest and highest ST50 values occurring for PI-Cr (42 h, 1.75 d) and PI-Ur populations (66–90 h, 2.75–3.75 h), respectively. Therefore, the F1 third-instar larvae of FAW populations were largely susceptible to Vip3Aa/Cry-producing maize foliage, and the most contrasting susceptibility occurred in the insects from Piauí state, Brazil. These results indicate that progeny of FAWs from areas highly pressured with Vip3Aa/Cry Bt maize hybrids are killed on maize foliage producing Vip3Aa and Cry Bt proteins despite field reports of increased leaf damage by the larvae in some locations. This research informs decision making for Bt-crop resistance management by producers, technicians, and researchers in local, regional, and world agriculture. [ABSTRACT FROM AUTHOR]- Published
- 2024
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6. A Contribution towards Sustainable Development in the Amazon Based on a Socioeconomic and Environmental Analysis of Visceral Leishmaniasis in the State of Pará, Brazil.
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Miranda, Claudia do Socorro Carvalho, de Souza, Bruna Costa, Figueiredo, Eric Renato Lima, de Melo Neto, João Simão, da Silva, Hilton Pereira, da Silva, Marcos Valerio Santos, Althoff, Sérgio Luiz, Filgueiras, Tainara Carvalho Garcia Miranda, Miranda, Debora do Socorro Carvalho, and Gonçalves, Nelson Veiga
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- 2024
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7. New Pyrazolyl Thioureas Active against the Staphylococcus Genus.
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Schito, Anna Maria, Caviglia, Debora, Penco, Susanna, Spallarossa, Andrea, Cichero, Elena, Tasso, Bruno, and Brullo, Chiara
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STAPHYLOCOCCUS ,CYSTIC fibrosis ,PYRAZOLYL compounds ,GRAM-negative bacteria ,LUNG diseases ,CYTOTOXINS ,THIOUREA - Abstract
To meet the urgent need for new antibacterial molecules, a small library of pyrazolyl thioureas (PTUs) was designed, synthesized and tested against difficult-to-treat human pathogens. The prepared derivatives are characterized by a carboxyethyl functionality on C4 and different hydroxyalkyl chains on N1. Compounds 1a–o were first evaluated against a large panel of Gram-positive and Gram-negative pathogens. In particular, the majority of PTUs proved to be active against different species of the Staphylococcus genus, with MIC values ranging from 32 to 128 µg/mL on methicillin-resistant Staphylococcus strains, often responsible for severe pulmonary disease in cystic fibrosis patients. Time-killing experiments were also performed for the most active compounds, evidencing a bacteriostatic mechanism of action. For most active derivatives, cytotoxicity was evaluated in Vero cells, and at the tested concentrations and at the experimental exposure time of 24 h, none of the compounds analysed showed significant toxicity. In addition, favourable drug-like, pharmacokinetic and toxicity properties were predicted for all new synthesized derivatives. Overall, the collected data confirmed the PTU scaffold as a promising chemotype for the development of novel antibacterial agents active against Gram-positive multi-resistant strains frequently isolated from cystic fibrosis patients. [ABSTRACT FROM AUTHOR]
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- 2024
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8. Sex-Hormone-Binding Globulin Gene Polymorphisms and Breast Cancer Risk in Caucasian Women of Russia.
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Ponomarenko, Irina, Pasenov, Konstantin, Churnosova, Maria, Sorokina, Inna, Aristova, Inna, Churnosov, Vladimir, Ponomarenko, Marina, Reshetnikov, Evgeny, and Churnosov, Mikhail
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BRCA genes ,BREAST ,DISEASE risk factors ,GENETIC models ,GLOBULINS ,GENETIC polymorphisms ,SINGLE nucleotide polymorphisms ,HERITABILITY - Abstract
In our work, the associations of GWAS (genome-wide associative studies) impact for sex-hormone-binding globulin (SHBG)-level SNPs with the risk of breast cancer (BC) in the cohort of Caucasian women of Russia were assessed. The work was performed on a sample of 1498 women (358 BC patients and 1140 control (non BC) subjects). SHBG correlated in previously GWAS nine polymorphisms such as rs780093 GCKR, rs17496332 PRMT6, rs3779195 BAIAP2L1, rs10454142 PPP1R21, rs7910927 JMJD1C, rs4149056 SLCO1B1, rs440837 ZBTB10, rs12150660 SHBG, and rs8023580 NR2F2 have been genotyped. BC risk effects of allelic and non-allelic SHBG-linked gene SNPs interactions were detected by regression analysis. The risk genetic factor for BC developing is an SHBG-lowering allele variant C rs10454142 PPP1R21 ([additive genetic model] OR = 1.31; 95%CI = 1.08–1.65; p
perm = 0.024; power = 85.26%), which determines 0.32% of the cancer variance. Eight of the nine studied SHBG-related SNPs have been involved in cancer susceptibility as part of nine different non-allelic gene interaction models, the greatest contribution to which is made by rs10454142 PPP1R21 (included in all nine models, 100%) and four more SNPs—rs7910927 JMJD1C (five models, 55.56%), rs17496332 PRMT6 (four models, 44.44%), rs780093 GCKR (four models, 44.44%), and rs440837 ZBTB10 (four models, 44.44%). For SHBG-related loci, pronounced functionality in the organism (including breast, liver, fibroblasts, etc.) was predicted in silico, having a direct relationship through many pathways with cancer pathophysiology. In conclusion, our results demonstrated the involvement of SHBG-correlated genes polymorphisms in BC risk in Caucasian women in Russia. [ABSTRACT FROM AUTHOR]- Published
- 2024
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9. Application of Proton Ionic Liquid in the Process of Obtaining Bioethanol from Hemp Stalks.
- Author
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Smuga-Kogut, Małgorzata, Walendzik, Bartosz, Lewicka-Rataj, Katarzyna, Kogut, Tomasz, Bychto, Leszek, Jachimowicz, Piotr, and Cydzik-Kwiatkowska, Agnieszka
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ETHANOL as fuel ,HEMICELLULOSE ,IONIC liquids ,HEMP ,ETHANOL ,DEIONIZATION of water ,PROTONS ,BIOPOLYMERS - Abstract
In this work, hemp (Cannabis sativa L.) stalks were pretreated with pyrrolidinium acetate [Pyrr][AC] to increase the availability of cellulose for cellulolytic enzymes and thus improve the production of 2G ethanol from reducing sugars. The process was carried out under different temperature and time conditions: The control sample was raw material and deionized water, and the second sample was kept at 21 °C for 24 h. The third sample was kept at 90 °C for 30 min, and the fourth sample was kept at the same temperature for 24 h. For each pretreatment, the extraction of lignin and hemicellulose was determined, as well as the change in biomass composition before and after pretreatment. The stalks of hemp seed contained 41.54% cellulose, 18.08% lignin and 28. 87% hemicellulose. [Pyrr][AC] used to dissolve seed hemp at 90 °C for 24 h was most effective in the extraction of this biopolymer, extracting 3.1% content. After enzymatic hydrolysis, the highest content of reducing sugars was found for samples of hemp stalks that were first pretreated with proton ionic liquid (PIL) and stirred at 90 °C for 24 h. On the other hand, the highest ethanol content (5.6 g/L) after fermentation and yeast viability (56.7%) after 72 h were obtained in samples pretreated at 90 °C and for 24 h. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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10. NORAD -Regulated Signaling Pathways in Breast Cancer Progression.
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Capela, Ana Maria, Tavares-Marcos, Carlota, Estima-Arede, Hugo F., Nóbrega-Pereira, Sandrina, and Bernardes de Jesus, Bruno
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BREAST tumor treatment ,DISEASE progression ,PROTEINS ,NEOVASCULARIZATION ,CANCER chemotherapy ,RNA ,CELL physiology ,DRUG resistance ,CELLULAR signal transduction ,CELL cycle ,MESSENGER RNA ,DNA damage - Abstract
Simple Summary: Breast cancer (BC) is a heterogeneous disease classified into different subtypes presenting several treatment challenges, especially in more advanced cases arising from triple negative breast cancer. NORAD is a long non-coding RNA (lncRNA) activated by DNA damage, with an impacting role in the repair process of DNA insults. This lncRNA is differentially expressed in BC subtypes, participating in cancer initiation and progression, by interacting with an extended range of signaling partners. Here, we review the network of NORAD molecular interactions with relevance, as well as NORAD's potential as a prognostic, predictive and target for BC treatment. Long non-coding RNA activated by DNA damage (NORAD) has recently been associated with pathologic mechanisms underlying cancer progression. Due to NORAD's extended range of interacting partners, there has been contradictory data on its oncogenic or tumor suppressor roles in BC. This review will summarize the function of NORAD in different BC subtypes and how NORAD impacts crucial signaling pathways in this pathology. Through the preferential binding to pumilio (PUM) proteins PUM1 and PUM2, NORAD has been shown to be involved in the control of cell cycle, angiogenesis, mitosis, DNA replication and transcription and protein translation. More recently, NORAD has been associated with PUM-independent roles, accomplished by interacting with other ncRNAs, mRNAs and proteins. The intricate network of NORAD-mediated signaling pathways may provide insights into the potential design of novel unexplored strategies to overcome chemotherapy resistance in BC treatment. [ABSTRACT FROM AUTHOR]
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- 2024
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11. A novel HPV16 splicing enhancer critical for viral oncogene expression and cell immortalization.
- Author
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Jönsson, Johanna, Wang, Lianqing, Kajitani, Naoko, and Schwartz, Stefan
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- 2024
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12. Salmonella Typhimurium with Eight Tandem Copies of bla NDM-1 on a HI2 Plasmid.
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Song, Huijuan, Zou, Siyu, Huang, Yi, Jian, Cui, Liu, Weiyong, Tian, Lei, Gong, Lu, Chen, Zhongju, Sun, Ziyong, and Wang, Yue
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SALMONELLA typhimurium ,PLASMIDS ,MULTIDRUG resistance ,MICROBIAL sensitivity tests ,SALMONELLA enterica ,INFECTION control - Abstract
Carbapenem-resistant Salmonella has recently aroused increasing attention. In this study, a total of four sequence type 36 Salmonella enterica subsp. enterica serovar Typhimurium (S. Typhimurium) isolates were consecutively isolated from an 11-month-old female patient with a gastrointestinal infection, of which one was sensitive to carbapenems and three were resistant to carbapenems. Via antibiotic susceptibility testing, a carbapenemases screening test, plasmid conjugation experiments, Illumina short-reads, and PacBio HiFi sequencing, we found that all four S. Typhimurium isolates contained a bla
CTX-M-14 -positive IncI1 plasmid. One carbapenem-sensitive S. Typhimurium isolate then obtained an IncHI2 plasmid carrying blaNDM-1 and an IncP plasmid without any resistance genes during the disease progression. The blaNDM-1 gene was located on a new 30 kb multiple drug resistance region, which is flanked by IS26 and TnAs2, respectively. In addition, the ST_F0903R isolate contained eight tandem copies of the ISCR1 unit (ISCR1-dsbD-trpF-ble-blaNDM-1 -ISAba125Δ1), but an increase in MICs to carbapenems was not observed. Our work further provided evidence of the rapid spread and amplification of blaNDM-1 through plasmid. Prompting the recognition of carbapenem-resistant Enterobacterales and the initiation of appropriate infection control measures are essential to avoid the spread of these organisms. [ABSTRACT FROM AUTHOR]- Published
- 2024
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13. Bacillus thuringiensis Bt_UNVM-84, a Novel Strain Showing Insecticidal Activity against Anthonomus grandis Boheman (Coleoptera: Curculionidae).
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Sauka, Diego Herman, Peralta, Cecilia, Pérez, Melisa Paula, Molla, Antonella, Fernandez-Göbel, Tadeo, Ocampo, Federico, and Palma, Leopoldo
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BACILLUS thuringiensis ,CURCULIONIDAE ,BEETLES ,INSECT pests ,LARVAE ,GRAM-positive bacteria - Abstract
Bacillus thuringiensis is a Gram-positive bacterium known for its insecticidal proteins effective against various insect pests. However, limited strains and proteins target coleopteran pests like Anthonomous grandis Boheman, causing substantial economic losses in the cotton industry. This study focuses on characterizing a Bacillus sp. strain, isolated from Oncativo (Argentina), which exhibits ovoid to amorphous parasporal crystals and was designated Bt_UNVM-84. Its genome encodes genes for the production of two pairs of binary Vpb1/Vpa2 proteins and three Cry-like proteins showing similarity with different Cry8 proteins. Interestingly, this gene content was found to be conserved in a previously characterized Argentine isolate of B. thuringiensis designated INTA Fr7-4. SDS-PAGE analysis revealed a major band of 130 kDa that is proteolytically processed to an approximately 66-kDa protein fragment by trypsin. Bioassays performed with spore-crystal mixtures demonstrated an interesting insecticidal activity against the cotton boll weevil A. grandis neonate larvae, resulting in 91% mortality. Strain Bt_UNVM-84 is, therefore, an interesting candidate for the efficient biological control of this species, causing significant economic losses in the cotton industry in the Americas. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
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14. Fitness of Nutrition Regulation in a Caterpillar Pest Mythimna separata (Walker): Insights from the Geometric Framework.
- Author
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Sun, Shaolei, Yang, Zhen, Ren, Jinchan, Liu, Tongxian, and Jing, Xiangfeng
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CATERPILLARS ,FOOD consumption ,NUTRITIONAL status ,NUTRITION ,INSECT development ,FOOD quality - Abstract
Simple Summary: A critical environmental factor that affects the growth and development of insect herbivores is food quality, and insect herbivores require the correct blend and balance of different nutrients in order to meet their physiological demands. For the first time, we investigated the nutritional regulation of the oriental armyworm, Mythimna separata (walker), and the association between insect performance (i.e., developmental time, insect mass, and reproductive response) and nutrients. Caterpillars had different intake targets for two macronutrients, proteins and carbohydrates, at two larval stages, and food consumption and nutrient intake were closely correlated with the content of protein and carbohydrate, respectively. Interestingly, we also found that the trade-off between nutritional regulation and fecundity, a phenomenon often seen in this migrating species, may be attributed to food quality and, subsequently, physiological preparation. These results help us better understand the behavior of this economically important pest in the field. In nature, plants can contain variable nutrients depending upon the species, tissue, and developmental stage. Insect herbivores may regulate their nutrient intake behaviorally and physio- logically when encountering different foods. This study examined the nutritional regulation of the oriental armyworm, Mythimna separata, for the first time. In one experiment, we allowed the cater-pillars to choose between two nutritionally balanced but complementary diets. The caterpillars did not randomly consume the paired foods, but instead chose between the nutritionally balanced but complementary diets. This intake behavior was found to change with their developmental stages. Furthermore, the nutrient concentrations in food significantly impacted the insect's performance. In the other experiment, caterpillars were given one of eleven diets that reflected the different nutrient conditions in the field. The results showed that proteins were significantly associated with developmental time and fecundity. For example, by consuming protein-biased food, the caterpillars developed faster and produced more eggs. In contrast, carbohydrates were more strongly linked to lipid accumulation, and caterpillars accumulated more lipids when consuming the carbohydrate-biased food. Moreover, the caterpillars were also found to actively regulate their intake of proteins and carbohydrates based on food quality and to physiologically prepare for subsequent life stages. These findings enhance our understanding of how M. separata feeds and responds to different nutritional environments in the field, which could have implications for managing insect herbivores in agricultural settings. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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15. Effect of Camel Peptide on the Biofilm of Staphylococcus epidermidis and Staphylococcus haemolyticus Formed on Orthopedic Implants.
- Author
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Nowicka, Joanna, Janczura, Adriana, Pajączkowska, Magdalena, Chodaczek, Grzegorz, Szymczyk-Ziółkowska, Patrycja, Walczuk, Urszula, and Gościniak, Grażyna
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ORTHOPEDIC implants ,PEPTIDES ,STAPHYLOCOCCUS epidermidis ,PEPTIDE antibiotics ,BIOFILMS ,BONE screws - Abstract
The increasing bacterial drug resistance and the associated challenges in the treatment of infections warrant the search for alternative therapeutic methods. Hope is placed in antimicrobial peptides, which have a broad spectrum of action and are effective against strains which are resistant to conventional antibiotics. Antimicrobial peptides are also tested for their efficacy in the treatment of infections associated with the formation of biofilm. The aim of the present study was to examine the effect of Camel peptide on S. epidermidis and S. haemolyticus adhesion to and formation of biofilm on steel cortical bone screws and also on the process of reducing mature biofilm in orthopedic implants. The tests were performed on steel implants for osteosynthesis. The MIC value and MBEC values of the peptide were determined using the microdilution method in microtiter plates. The effect of the peptide on adhesion and biofilm formation, as well as on the activity on the preformed biofilm, was evaluated using quantitative methods and confocal microscopy. The presented research results indicate that the peptide exhibits very good antimicrobial properties against the analyzed strains. Concentrations above MIC reduced biofilm in the range of 90–99%. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
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16. Thirty Years with ERH: An mRNA Splicing and Mitosis Factor Only or Rather a Novel Genome Integrity Protector?
- Author
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Kozlowski, Piotr
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RNA metabolism ,DNA repair ,GENOMES ,NUCLEIC acids ,RNA polymerase II ,NUCLEAR proteins - Abstract
ERH is a 100 to about 110 aa nuclear protein with unique primary and three-dimensional structures that are very conserved from simple eukaryotes to humans, albeit some species have lost its gene, with most higher fungi being a noteworthy example. Initially, studies on Drosophila melanogaster implied its function in pyrimidine metabolism. Subsequently, research on Xenopus laevis suggested that it acts as a transcriptional repressor. Finally, studies in humans pointed to a role in pre-mRNA splicing and in mitosis but further research, also in Caenorhabditis elegans and Schizosaccharomyces pombe, demonstrated its much broader activity, namely involvement in the biogenesis of mRNA, and miRNA, piRNA and some other ncRNAs, and in repressive heterochromatin formation. ERH interacts with numerous, mostly taxon-specific proteins, like Mmi1 and Mei2 in S. pombe, PID-3/PICS-1, TOST-1 and PID-1 in C. elegans, and DGCR8, CIZ1, PDIP46/SKAR and SAFB1/2 in humans. There are, however, some common themes in this wide range of processes and partners, such as: (a) ERH homodimerizes to form a scaffold for several complexes involved in the metabolism of nucleic acids, (b) all these RNAs are RNA polymerase II transcripts, (c) pre-mRNAs, whose splicing depends on ERH, are enriched in transcripts of DNA damage response and DNA metabolism genes, and (d) heterochromatin is formed to silence unwanted transcription, e.g., from repetitive elements. Thus, it seems that ERH has been adopted for various pathways that serve to maintain genome integrity. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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17. Antimicrobial Resistance in Bacteria from Meat and Meat Products: A One Health Perspective.
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Conceição, Sara, Queiroga, Maria Cristina, and Laranjo, Marta
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DRUG resistance in microorganisms ,MEAT ,SUSTAINABILITY ,PORK products ,BACTERIA ,ANTIMICROBIAL stewardship ,TRICLOSAN - Abstract
According to the 2030 Agenda of the United Nations, one of the sustainable development goals is to ensure sustainable consumption and production patterns. The need to ensure food safety includes, other than microbiological hazards, concerns with antimicrobial-resistant (AMR) bacteria. The emergence of resistant bacteria in the food industry is essentially due to the abusive, and sometimes incorrect, administration of antimicrobials. Although not allowed in Europe, antimicrobials are often administered to promote animal growth. Each time antimicrobials are used, a selective pressure is applied to AMR bacteria. Moreover, AMR genes can be transmitted to humans through the consumption of meat-harbouring-resistant bacteria, which highlights the One Health dimension of antimicrobial resistance. Furthermore, the appropriate use of antimicrobials to ensure efficacy and the best possible outcome for the treatment of infections is regulated through the recommendations of antimicrobial stewardship. The present manuscript aims to give the current state of the art about the transmission of AMR bacteria, particularly methicillin-resistant S. aureus, ESBL-producing Enterobacteriaceae, and vancomycin-resistant Enterococcus spp., along with other ESKAPE bacteria, from animals to humans through the consumption of meat and meat products, with emphasis on pork meat and pork meat products, which are considered the most consumed worldwide. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
18. The Role of Non-Coding RNAs in Myelodysplastic Neoplasms.
- Author
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Georgoulis, Vasileios, Koumpis, Epameinondas, and Hatzimichael, Eleftheria
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MYELODYSPLASTIC syndromes treatment ,RNA physiology ,MYELODYSPLASTIC syndromes ,MYELOPROLIFERATIVE neoplasms ,MICRORNA ,HEMATOLOGIC malignancies ,BONE marrow ,TUMOR markers - Abstract
Simple Summary: Myelodysplastic neoplasms (MDS) are a group of hematologic malignancies with an increased risk of transformation to acute myeloid leukemia. Non-coding RNAs are RNA molecules of variable size that do not translate into proteins but regulate gene expression during multiple cellular processes. These RNAs have been found deregulated in several cancers, including MDS. In this review, we aim to summarize research findings on the biological role of different non-coding RNAs in MDS development and progression, with emphasis on molecules that have exhibited prognostic or predictive value and could, hence, guide decision-making in clinical practice. Myelodysplastic syndromes or neoplasms (MDS) are a heterogeneous group of myeloid clonal disorders characterized by peripheral blood cytopenias, blood and marrow cell dysplasia, and increased risk of evolution to acute myeloid leukemia (AML). Non-coding RNAs, especially microRNAs and long non-coding RNAs, serve as regulators of normal and malignant hematopoiesis and have been implicated in carcinogenesis. This review presents a comprehensive summary of the biology and role of non-coding RNAs, including the less studied circRNA, siRNA, piRNA, and snoRNA as potential prognostic and/or predictive biomarkers or therapeutic targets in MDS. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
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19. A Prophylactic Application of Systemic Insecticides Contributes to the Management of the Hibiscus Bud Weevil Anthonomus testaceosquamosus Linell (Coleoptera: Curculionidae).
- Author
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Vargas, German, Greene, A. Daniel, Velazquez-Hernandez, Yisell, Yang, Xiangbing, Kendra, Paul E., and Revynthi, Alexandra M.
- Subjects
INSECTICIDE application ,CURCULIONIDAE ,CHLORANTRANILIPROLE ,HIBISCUS ,BUDS - Abstract
The hibiscus bud weevil is an invasive pest that attacks tropical hibiscus. Its management has been challenging due to its cryptic adult and concealed immature stages. We evaluated the efficiency of four systemic insecticides (spirotetramat, chlorantraniliprole, flupyradifurone, and cyantraniliprole) against the pest using two approaches: one applied 4 weeks before infestation (prophylactic) and the other 1 week after (curative). The number of eggs, larvae, and feeding holes per sampled bud were recorded 7, 14, 21, and 28 days after the infestation (prophylactic), and after the application (curative), respectively. In general, a greater number of treatment effects were detected in the prophylactic approach in comparison with those in the curative. With the prophylactic approach, the mean number of larvae and feeding holes per actively growing bud was significantly greater for the control (water) than for all insecticides. Among fallen buds, chlorantraniliprole, cyantraniliprole, and spirotetramat had significantly fewer feeding holes than those in the control. With the curative approach, the mean number of feeding holes was greater in the control with no differences among insecticides. The prophylactic application can effectively suppress initial HBW infestation, in contrast to the curative application targeting already high populations. This provides the opportunity for reducing the impact of this regulated pest in areas of expansion. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
20. Perception of Ticks and Tick-Borne Diseases Worldwide.
- Author
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de la Fuente, José, Estrada-Peña, Agustín, Rafael, Marta, Almazán, Consuelo, Bermúdez, Sergio, Abdelbaset, Abdelbaset E., Kasaija, Paul D., Kabi, Fredrick, Akande, Foluke Adedayo, Ajagbe, Dorcas Oluwakemi, Bamgbose, Timothy, Ghosh, Srikant, Palavesam, Azhahianambi, Hamid, Penny H., Oskam, Charlotte L., Egan, Siobhon L., Duarte-Barbosa, Amanda, Hekimoğlu, Olcay, Szabó, Matias P. J., and Labruna, Marcelo B.
- Subjects
TICK-borne diseases ,TICKS ,ANIMAL health ,TICK infestations ,INFORMATION society - Abstract
In this comprehensive review study, we addressed the challenge posed by ticks and tick-borne diseases (TBDs) with growing incidence affecting human and animal health worldwide. Data and perspectives were collected from different countries and regions worldwide, including America, Europe, Africa, Asia, and Oceania. The results updated the current situation with ticks and TBD and how it is perceived by society with information bias and gaps. The study reinforces the importance of multidisciplinary and international collaborations to advance in the surveillance, communication and proposed future directions to address these challenges. [ABSTRACT FROM AUTHOR]
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- 2023
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21. Dose Effects of Flubendiamide and Thiodicarb against Spodoptera Species Developing on Bt and Non-Bt Soybean.
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Godoy, Daniela N., Pretto, Venicius E., de Almeida, Poliana G., Weschenfelder, Marlon A. G., Warpechowski, Luiz F., Horikoshi, Renato J., Martinelli, Samuel, Head, Graham P., and Bernardi, Oderlei
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SPODOPTERA ,INSECTICIDES ,FALL armyworm ,SOY proteins ,SPECIES ,EXPOSURE dose - Abstract
Simple Summary: Previous studies have reported that infestations by species of the genus Spodoptera (Lepidoptera: Noctuidae) have increased in Cry1Ac Bt soybean fields in Brazil, indicating that chemical insecticides will be needed to reduce crop damage. For that reason, we evaluated the dose effects of the insecticides flubendiamide and thiodicarb against Spodoptera species surviving on soybean expressing Cry1A.105, Cry2Ab2 and Cry1Ac Bt proteins; soybean expressing just Cry1Ac; and non-Bt soybean. Our results indicated that L1 and L2 larvae of S. cosmioides, S. eridania and S. albula surviving on Cry1A.105/Cry2Ab2/Cry1Ac and Cry1Ac soybean leaves sprayed with 50% or 100% of the field label dose of flubendiamide (70 mL/ha) or thiodicarb (400 g/ha) presented >86% mortality. Among the Spodoptera larvae surviving insecticide treatment, only some of the S. frugiperda larvae surviving on Cry1Ac and non-Bt soybean sprayed with 50% of the field label dose of flubendiamide or thiodicarb produced fertile adults. However, the surviving insects had a longer larval stage duration and the females laid fewer eggs, indicating substantial sublethal effects on the biological traits of this species. An increase in Spodoptera species was reported in Bt soybean fields expressing Cry1Ac insecticidal proteins in Brazil, requiring additional management with chemical insecticides. Here, we evaluated the dose effects of flubendiamide and thiodicarb on Spodoptera cosmioides (Walker, 1858), Spodoptera eridania (Stoll, 1782), Spodoptera albula (Walker, 1857) and Spodoptera frugiperda (J. E. Smith, 1797) (Lepidoptera: Noctuidae) that survived on MON 87751 × MON 87708 × MON 87701 × MON 89788, expressing Cry1A.105, Cry2Ab2 and Cry1Ac; MON 87701 × MON 89788 soybean, expressing Cry1Ac; and non-Bt soybean. On unsprayed Cry1A.105/Cry2Ab2/Cry1Ac soybean, only S. frugiperda showed ~60% mortality after 10 d, whereas S. cosmioides, S. eridania and S. albula showed >81% mortality. The surviving larvae of all species on this Bt soybean showed >80% mortality when exposed to the field label dose of flubendiamide (70 mL/ha) or thiodicarb (400 g/ha) or at 50% of these doses. In contrast, all four species had <25% and <19% mortality on Cry1Ac and non-Bt soybean, respectively. The surviving S. cosmioides, S. eridania and S. albula on these soybean types presented >83% mortality after exposure to both dose levels of flubendiamide and thiodicarb. Some S. frugiperda larvae surviving on Cry1Ac and non-Bt soybean sprayed with a 50% dose of either insecticide developed into adults. However, the L1 larvae developing on Cry1Ac soybean leaves sprayed with flubendiamide and the L2 larvae on this soybean sprayed with thiodicarb had a prolonged immature stage, and the females displayed lower fecundity, which are likely to impact S. frugiperda population growth on soybean. [ABSTRACT FROM AUTHOR]
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- 2023
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22. Comparative Analysis of Cellulosic Ethanol Production from Lignocellulosic Substrate Moringa oleifera Using Kluyveromyces marxianus and Zymomonas mobilis.
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Sivarathnakumar, Shanmugam, Al-Ghanim, Khalid A., Nicoletti, Marcello, Govindarajan, Marimuthu, and Gurunathan, Baskar
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ZYMOMONAS mobilis ,MORINGA oleifera ,KLUYVEROMYCES marxianus ,LIGNOCELLULOSE ,COMPARATIVE studies ,CELLULOSIC ethanol ,SODIUM azide - Abstract
In the current investigation, the woody stem of Moringa oleifera was processed by chipping and milling and was subsequently exposed to a combination of pretreatments involving a 3% v/v solution of nitric acid and autohydrolysis. The simultaneous saccharification and fermentation (SSF) of the pretreated hydrolysate of M. oleifera was conducted using Zymomonas mobilis and Kluyveromyces marxianus in occurrence of commercial cellulase enzyme, Tween 80, and sodium azide. The fermentation process parameters for Z. mobilis were optimized individually, including a substrate concentration of 5% (w/v), concentration of inoculum 5% (v/v), pH 5.4, and temperature 34 °C. Similarly, for K. marxianus, the process parameters were optimized individually, with a substrate concentration of 5% (w/v), an inoculum concentration of 3% (v/v), a pH of 5.1, and a temperature of 41 °C. The highest cellulosic ethanol concentration was achieved by the micro-organism K. marxianus after a fermentation period of 96 h. [ABSTRACT FROM AUTHOR]
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- 2023
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23. Evaluation of a Standardized Extract Obtained from Cashew Apple (Anacardium occidentale L.) Bagasse in DSS-Induced Mouse Colitis.
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da Silva, Gisele Goulart, Braga, Lucia Elaine de Oliveira, de Oliveira, Ellen Cristina Souza, de Carvalho, João Ernesto, Lazarini, Josy Goldoni, Rosalen, Pedro Luiz, Dionísio, Ana Paula, and Ruiz, Ana Lucia Tasca Gois
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INFLAMMATORY bowel diseases ,CASHEW tree ,CROHN'S disease ,BAGASSE ,COLITIS ,ULCERATIVE colitis - Abstract
Inflammatory bowel diseases (IBD) include Crohn's disease and ulcerative colitis. Several studies relate eating habits to different aspects of IBD, such as progression and worsening of the clinical condition. Therefore, many natural products (NPs) such as polyphenols and carotenoids have been identified as promising agents in supporting IBD. An interesting source for obtaining bioactive NPs is the by-products of the food industry. The present study evaluated the potential beneficial effect of a standardized extract (CAE) obtained from cashew apple bagasse in the dextran sulfate sodium (DSS)-induced ulcerative colitis model in mice. This was the first time that CAE had been evaluated in this experimental model. Chemical evaluation of CAE identified carotenoids (96.28 ± 0.15 mg/100 g), phenolic compounds (37.49 ± 0.64 mg/100 g), and a mixture of anacardic acids (C15:3 = 94.2 ± 0.6 mg/100 g; C15:2 = 108.4 ± 0.1 mg/100 g; C15:1 = 214.8 ± 0.2 mg/100 g). Administration of CAE (500 mg/kg, 4 days, p.o.) after DSS challenge was more effective in delaying disease progression compared with prior treatment (500 mg/kg, 30 days, p.o.), according to the disease activity index. However, no treatment strategy with CAE was able to prevent or inhibit disease progression, since all parameters evaluated (macroscopic, biochemical, and histopathological) in CAE-treated animals were similar to those observed in DSS-challenged animals. Despite the high dose (500 mg/kg), the standardized extract (CAE) did not result in an effective concentration of carotenoids. Furthermore, as some anacardic acids have been reported as histone acetyltransferases inhibitors, there could be a possible antagonistic relationship between carotenoids and anacardic acids. Complementary research will be necessary to test the hypothesis of antagonism. Thus, an optimized extract, with an even higher concentration of carotenoids, obtained from cashew apple bagasse, can be developed as a possible adjuvant food supplement for inflammatory bowel diseases. [ABSTRACT FROM AUTHOR]
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- 2023
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24. Inhibition of Acinetobacter baumannii Biofilm Formation Using Different Treatments of Silica Nanoparticles.
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Natsheh, Iyad Y., Elkhader, Mallak T., Al-Bakheit, Ala'a A., Alsaleh, Majd M., El-Eswed, Bassam I., Hosein, Nedaa F., and Albadawi, Duaa K.
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ACINETOBACTER baumannii ,SILICA nanoparticles ,BIOFILMS ,ANTIBIOTICS assay ,COPPER oxide ,CLAVULANIC acid ,SCANNING electron microscopy ,MICROPLATES - Abstract
There exists a multitude of pathogens that pose a threat to human and public healthcare, collectively referred to as ESKAPE pathogens. These pathogens are capable of producing biofilm, which proves to be quite resistant to elimination. Strains of A. baumannii, identified by the "A" in the acronym ESKAPE, exhibit significant resistance to amoxicillin in vivo due to their ability to form biofilm. This study aims to inhibit bacterial biofilm formation, evaluate novel silica nanoparticles' effectiveness in inhibiting biofilm, and compare their effectiveness. Amoxicillin was utilized as a positive control, with a concentration exceeding twice that when combined with silica NPs. Treatments included pure silica NPs, silica NPs modified with copper oxide (CuO.SiO
2 ), sodium hydroxide (NaOH.SiO2 ), and phosphoric acid (H3 PO4 .SiO2 ). The characterization of NPs was conducted using scanning electron microscopy (SEM), while safety testing against normal fibroblast cells was employed by MTT assay. The microtiter plate biofilm formation assay was utilized to construct biofilm, with evaluations conducted using three broth media types: brain heart infusion (BHI) with 2% glucose and 2% sucrose, Loria broth (LB) with and without glucose and sucrose, and Dulbecco's modified eagle medium/nutrient (DMEN/M). Concentrations ranging from 1.0 mg/mL to 0.06 µg/mL were tested using a microdilution assay. Results from SEM showed that pure silica NPs were mesoporous, but in the amorphous shape of the CuO and NaOH treatments, these pores were disrupted, while H3 PO4 was composed of sheets. Silica NPs were able to target Acinetobacter biofilms without harming normal cells, with viability rates ranging from 61–73%. The best biofilm formation was achieved using a BHI medium with sugar supplementation, with an absorbance value of 0.35. Biofilms treated with 5.0 mg/mL of amoxicillin as a positive control alongside 1.0 mg/mL of each of the four silica treatments in isolation, resulting in the inhibition of absorbance values of 0.04, 0.13, 0.07, 0.09, and 0.08, for SiO2 , CuO.SiO2 , NaOH.SiO2 and H3 PO4 .SiO2 , respectively. When amoxicillin was combined, inhibition increased from 0.3 to 0.04; NaOH with amoxicillin resulted in the lowest minimum biofilm inhibitory concentration (MBIC), 0.25 µg/mL, compared to all treatments and amoxicillin, whereas pure silica and composite had the highest MBIC, even when combined with amoxicillin, compared to all treatments, but performed better than that of the amoxicillin alone which gave the MBIC at 625 µg/mL. The absorbance values of MBIC of each treatment showed no significant differences in relation to amoxicillin absorbance value and relation to each other. Our study showed that smaller amoxicillin doses combined with the novel silica nanoparticles may reduce toxic side effects and inhibit biofilm formation, making them viable alternatives to high-concentration dosages. Further investigation is needed to evaluate in vivo activity. [ABSTRACT FROM AUTHOR]- Published
- 2023
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25. Conventional DNA-Damaging Cancer Therapies and Emerging cGAS-STING Activation: A Review and Perspectives Regarding Immunotherapeutic Potential.
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Lewicky, Jordan D., Martel, Alexandrine L., Gupta, Mukul Raj, Roy, René, Rodriguez, Galaxia M., Vanderhyden, Barbara C., and Le, Hoang-Thanh
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THERAPEUTIC use of antineoplastic agents ,CANCER chemotherapy ,IMMUNOSUPPRESSION ,CELLULAR signal transduction ,TUMORS ,DNA damage ,RADIOTHERAPY ,MEMBRANE proteins ,IMMUNOTHERAPY ,CYTOPLASM - Abstract
Simple Summary: The cGAS-STING cellular signaling pathway is a key member of the DNA damage response, whose role is to repair the DNA damage that occurs naturally during the life of a cell. Interestingly, cGAS-STING is known to promote immune responses against tumors, and is being explored for its potential use in cancer immunotherapy applications. The DNA damage caused by traditional cancer treatments such as radiation and chemotherapy is one of the main ways in which cancer cells are eradicated, and is increasingly being linked with cGAS-STING activation. In this review, we summarize the many reports of cGAS-STING activation by different conventional cancer therapies, highlighting the roles of their targets in the DNA damage response. As part of the review, we discuss an emerging "chemoimmunotherapy" concept where the DNA-damaging activity of these conventional therapies can potentially be exploited for its beneficial stimulation of anticancer immune responses by way of cGAS-STING activation. The potential advantages of such an approach are highlighted, and it becomes clear that targeted nanoparticle delivery systems will be critical in minimizing the associated immunotoxic and inflammatory activities of the entrapped chemotherapeutics. Many traditional cancer treatments such as radiation and chemotherapy are known to induce cellular DNA damage as part of their cytotoxic activity. The cGAS-STING signaling axis, a key member of the DNA damage response that acts as a sensor of foreign or aberrant cytosolic DNA, is helping to rationalize the DNA-damaging activity of these treatments and their emerging immunostimulatory capacity. Moreover, cGAS-STING, which is attracting considerable attention for its ability to promote antitumor immune responses, may fundamentally be able to address many of the barriers limiting the success of cancer immunotherapy strategies, including the immunosuppressive tumor microenvironment. Herein, we review the traditional cancer therapies that have been linked with cGAS-STING activation, highlighting their targets with respect to their role and function in the DNA damage response. As part of the review, an emerging "chemoimmunotherapy" concept whereby DNA-damaging agents are used for the indirect activation of STING is discussed as an alternative to the direct molecular agonism strategies that are in development, but have yet to achieve clinical approval. The potential of this approach to address some of the inherent and emerging limitations of cGAS-STING signaling in cancer immunotherapy is also discussed. Ultimately, it is becoming clear that in order to successfully employ the immunotherapeutic potential of the cGAS-STING axis, a balance between its contrasting antitumor and protumor/inflammatory activities will need to be achieved. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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26. Disruption of the Mammalian Ccr4–Not Complex Contributes to Transcription-Mediated Genome Instability.
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Hagkarim, Nafiseh Chalabi, Hajkarim, Morteza Chalabi, Suzuki, Toru, Fujiwara, Toshinobu, Winkler, G. Sebastiaan, Stewart, Grant S., and Grand, Roger J.
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RNA synthesis ,GENE expression ,GENOMES ,MITOGEN-activated protein kinases ,RNA regulation ,MITOGENS ,CHROMATIN-remodeling complexes ,DNA replication - Abstract
The mammalian Ccr4–Not complex, carbon catabolite repression 4 (Ccr4)-negative on TATA-less (Not), is a large, highly conserved, multifunctional assembly of proteins that acts at different cellular levels to regulate gene expression. It is involved in the control of the cell cycle, chromatin modification, activation and inhibition of transcription initiation, control of transcription elongation, RNA export, and nuclear RNA surveillance; the Ccr4–Not complex also plays a central role in the regulation of mRNA decay. Growing evidence suggests that gene transcription has a vital role in shaping the landscape of genome replication and is also a potent source of replication stress and genome instability. Here, we have examined the effects of the inactivation of the Ccr4–Not complex, via the depletion of the scaffold subunit CNOT1, on DNA replication and genome integrity in mammalian cells. In CNOT1-depleted cells, the elevated expression of the general transcription factor TATA-box binding protein (TBP) leads to increased RNA synthesis, which, together with R-loop accumulation, results in replication fork slowing, DNA damage, and senescence. Furthermore, we have shown that the stability of TBP mRNA increases in the absence of CNOT1, which may explain its elevated protein expression in CNOT1-depleted cells. Finally, we have shown the activation of mitogen-activated protein kinase signalling as evidenced by ERK1/2 phosphorylation in the absence of CNOT1, which may be responsible for the observed cell cycle arrest at the border of G1/S. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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27. Some Physiological Effects of Nanofertilizers on Wheat-Aphid Interactions.
- Author
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Chamani, Masoud, Naseri, Bahram, Rafiee-Dastjerdi, Hooshang, Emaratpardaz, Javid, Ebadollahi, Asgar, and Palla, Franco
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GREENBUG ,PEST control ,SUPEROXIDE dismutase ,CROP yields ,REVENUE management - Abstract
The increasing use of nanofertilizers in modern agriculture and their impact on crop yield and pest management require further research. In this study, the effects of nano-Fe, -Zn, and -Cu (which are synthesized based on nanochelating technology), and urea (N) fertilizers on the antioxidant activities of wheat plants (cv. Chamran), and the wheat green aphid Schizaphis graminum (Rondani) are investigated. The authors observed the highest levels of phenolics in non-infested nano-Zn-treated plants (26% higher compared with control). The highest H
2 O2 levels are in the infested and non-infested nano-Zn-treated and infested nano-Fe-treated plants (in infested nano-Zn and nano-Fe treated plants, 18% and non-infested nano-Zn-treated plants, 28% higher compared with control). The highest peroxidase (POX) activity is observed in the infested and non-infested N-treated and non-infested water-treated plants (almost 14%, 37%, and 46% higher than control, respectively). The lowest activity is in the infested plants' nano-Zn and -Fe treatments (almost 7 and 5 folds lower compared to the control, respectively). The highest and lowest catalase (CAT) activity are in the infested N-treated plants (almost 42% higher than control) and water-treated plants, respectively. The infested nano-Zn, -Fe, -Cu and Hoagland-treated plants showed the highest superoxide dismutase (SOD) activity. Regarding the antioxidant enzyme activities of S. graminum, the highest POX activity is in the nano-Cu treatment (more than two folds higher compared with control); the highest CAT and SOD activities are in the nano-Cu and -Zn treatments. It can be concluded that the application of nanofertilizers caused increasing effects on the wheat plant's antioxidant system and its resistance to S. graminum. [ABSTRACT FROM AUTHOR]- Published
- 2023
- Full Text
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28. Survival, Development, and Fecundity of Spodoptera frugiperda (J.E. Smith) (Lepidoptera: Noctuidae) on Various Host Plant Species and Their Implication for Pest Management.
- Author
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Nurkomar, Ihsan, Trisnawati, Dina Wahyu, Fahmi, Fajrin, and Buchori, Damayanti
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FALL armyworm ,PEST control ,HOST plants ,PLANT species ,SPINACH ,NOCTUIDAE ,PAPAYA ,BANANAS - Abstract
Simple Summary: Spodoptera frugiperda is an invasive pest of corn in several countries, including Indonesia. The pest is highly polyphagous, with limited information available on its biological parameters. This information about its biological parameters, such as survival, life cycle, and fecundity using different host plants, could be critical to developing effective pest management strategies. After testing 14 different host plants, we found that even though S. frugiperda preferred corn as the primary host, several other host plants, e.g., papaya, water spinach, banana, spinach, cucumber, and a weed (coco grass), can act as alternate hosts for S. frugiperda, implying the use of these plants as a hedge or trap plant for the management of this pest using culture technique manipulation. However, other control methods need to be considered for further research to develop sustainable solutions for its management. Spodoptera frugiperda is Indonesia's relatively new invasive polyphagous insect pest. So far, S. frugiperda infestation has only been reported in corn and rice in Indonesia. However, S. frugiperda is known to feed on many commercial crops in other countries. To date, information on the biological parameters of S. frugiperda is limited in Indonesian ecologies. Since host plants are a critical factor for insect life history and have the potential to be used for pest control strategies, it is essential to study the biology and survival of S. frugiperda on different host plants. This research aimed to investigate the survival, development time, and fecundity of S. frugiperda on other host plant species to predict possible infestation rates for use in pest management. The study was conducted by rearing S. frugiperda on 14 common cultivated host plant species in Indonesia. The survival rate, development time, fecundity, and potential attack rate of S. frugiperda on various tested host plants were analyzed in this study. The findings revealed that corn was the primary host for S. frugiperda. The ability of S. frugiperda to survive on papaya, water spinach, banana, spinach, cucumber, and coco grass indicates that these plants are potential alternate hosts for S. frugiperda. Long beans, bok choy, choy sum, and beans might be indicated as a shelter for S. frugiperda. Meanwhile, inappropriate hosts for S. frugiperda include cabbage, broccoli, and cauliflower due to their low survival rate on these plants. This research indicates that these plants have the potential to be used as a hedge, trap, or bunker plant in S. frugiperda management strategies. However, to prevent detrimental damage, control methods are needed in an integrated manner, including monitoring pest populations, habitat manipulation, and conservation of natural enemies. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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29. Planting Date of Cotton in the Brazilian Cerrado Drives Boll Weevil (Coleoptera: Curculionidae) Infestation.
- Author
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Santos, Patrícia J., Dias, Antônio M., Campos, Karolayne L., Araújo, Ana C. A., Oliveira, Andréa A. S., Suinaga, Fábio A., Torres, Jorge B., and Bastos, Cristina S.
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COTTON ,SEA Island cotton ,CURCULIONIDAE ,CERRADOS ,BEETLES ,PLANT life cycles ,COTTON growing ,BT cotton - Abstract
Simple Summary: Cotton is cultivated in subtropical and seasonally dry tropical areas in the northern and southern hemispheres as the most common natural fiber used to make textiles. In the Americas, especially Central and South America, cotton is infested by a beetle named the boll weevil. This weevil feeds directly on the cotton reproductive structures, causing up to 70% yield losses. The flower buds and bolls damaged by weevils fall on the ground, becoming lost or are retained by the plants producing poor-quality fiber. Boll weevil is a target of 19–25 insecticide applications of broad-spectrum insecticides throughout the season, harming non-target organisms and growers. Therefore, alternatives to manage boll weevil need to be pursued. In this work, we studied how the planting dates of cotton could negatively affect boll weevil infestation. We studied three contrasting planting dates, monthly spaced, and looked at how the cotton plant and the boll weevil responded. We noticed that the middle-planting date was unfavorable to the boll weevil compared to the early and late-planting dates because cotton plants developed faster then and so escaped from pest infestation. Thus, cotton crop seeded late was more prone to receive numerous and fertile insects dispersing from surrounding cultivations while early planted cotton was more prone to receive dispersing adults from the refuge areas avid for infesting cotton reproductive structures. Although the boll weevil (BW), Anthonomus grandis grandis (Coleoptera: Curculionidae) has been attributed to the significant losses caused to cotton yield in the Americas, the categorization as a quarentenary pest in places where it is still not occurring has increased its relevance worldwide. In areas where it is widespread, pest suppression relies on many broad-spectrum insecticide applications. However, other control tactics are sought. Considering that early-flowering cultivars escape from boll weevil infestation, we investigated if three different planting dates (November, December, and January) could alter the plant life cycle, allowing the plants to escape from boll weevil infestation. Field trials were run in two seasons (2014/2015 and 2017/2018), and variables (days required to reach each flowering stage, fruiting plant structures—undamaged and damaged by the BW, and totals—number of boll weevils on plants and that had emerged from fallen structures on the ground) were assessed over 29 and 33 weeks, respectively. Based on the number of days required to initiate and terminate the flowering stage, the time to reach the economic threshold (ET), the number of undamaged, damaged, and the total reproductive structures, we concluded that planting dates in December for the Central Cerrado of Brazil should be preferred over the other two tested dates. Cultivations run at this planting date, anticipating the flowering period initiation and termination, reduced infested flowering structures, and delayed the decision making to control the pest, when compared to the other two planting dates. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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30. Fertility Life Table, Thermal Requirements, and Ecological Zoning of Anthonomus grandis grandis Boheman (Coleoptera: Curculionidae) in Brazil.
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Pereira, Fernanda Polastre, Diniz, Alexandre José Ferreira, and Parra, José Roberto Postali
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ECOLOGICAL zones ,LIFE tables ,OVIPARITY ,EGGS ,FERTILITY ,BEETLES ,CURCULIONIDAE - Abstract
Simple Summary: The boll weevil is a key pest of cotton in Central and South America. Its thermal requirements, development time, oviposition, survival, adult longevity, and sex ratio were determined under laboratory conditions, and the data were used to construct a fertility life table. Based on the results and a GIS (Geographic Information System), the R
0 was estimated for different Brazilian regions and represented on a map. This information can be useful for developing strategies to manage the pest in cotton crops. The boll weevil, Anthonomus grandis grandis Boh., is the most important cotton pest in Central and South America. The biological characteristics and thermal requirements of boll weevils reared on an artificial diet were assessed at seven constant temperatures (18, 20, 22, 25, 28, 30, and 32 ± 1 °C) under laboratory conditions. These data were used to determine the ecological zoning for the pest in Brazil. The development time; oviposition period; the number of eggs produced; survival of eggs, larvae, and pupae; adult longevity; and sex ratio were recorded, and additional life table parameters were calculated. The total development duration ranged from 16.1 (32 °C) to 46.2 (18 °C) days. Temperature significantly affected the number of eggs laid per female (fecundity), with the highest number of eggs observed at 25 °C (251 ± 15.8). The parameters from the fertility life table indicated the greatest population growth at 25 °C and 28 °C. The net reproductive rate (R0 ) at these temperatures was 22.25 times higher than at 18 °C. Based on R0 and temperature, an ecological zoning of the pest was developed for Brazil. Brazilian regions with mean temperatures above 20 °C and below 30 °C are most favorable for the population growth of the boll weevil. The most suitable crop areas were found to be the north, midwest, and part of the northeast region, although the weevil can occur throughout Brazil if the host plants are available. [ABSTRACT FROM AUTHOR]- Published
- 2023
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31. Investigating the Migratory Behavior of Soybean Looper, a Major Pest of Soybean, through Comparisons with the Corn Pest Fall Armyworm Using Mitochondrial Haplotypes and a Sex-Linked Marker.
- Author
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Nagoshi, Rodney N., Davis, Jeffrey A., Meagher, Robert L., Musser, Fred R., Head, Graham P., Portillo, Hector, and Teran, Henry
- Subjects
FALL armyworm ,CORN pests ,NOCTUIDAE ,AGRICULTURE ,HAPLOTYPES ,SOIL freezing - Abstract
The Noctuid moth soybean looper (SBL), Chrysodeixis includens (Walker), is an economically important pest of soybean (Glycine max (Linnaeus) Merrill). Because it is not known to survive freezing winters, permanent populations in the United States are believed to be limited to the southern regions of Texas and Florida, yet its geographical range of infestations annually extend to Canada. This indicates annual migrations of thousands of kilometers during the spring and summer growing season. This behavior is like that of the fall armyworm (FAW), Spodoptera frugiperda (J.E. Smith), also a Noctuid that is a major global pest of corn. SBL and FAW are projected to have very similar distributions of permanent populations in North America based on climate suitability modeling and the overlap in the distribution of their preferred host plants (corn and soybean). It therefore seems likely that the two species will display similar migratory behavior in the United States. This was tested by identifying genetic markers in SBL analogous to those successfully used to delineate FAW migratory pathways and comparing the distribution patterns of the markers from the two species. Contrary to expectations, the results indicate substantial differences in migratory behavior that appear to be related to differences in the timing of corn and soybean plantings. These findings underscore the importance of agricultural practices in influencing pest migration patterns, in particular the timing of host availability relative to mean seasonal air transport patterns. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
32. In Silico Identification of a BRCA1:miR-29:DNMT3 Axis Involved in the Control of Hormone Receptors in BRCA1-Associated Breast Cancers.
- Author
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Santarosa, Manuela, Baldazzi, Davide, Armellin, Michela, and Maestro, Roberta
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HORMONE receptors ,BRCA genes ,GENE expression ,BREAST cancer ,PROGESTERONE receptors ,DNA methylation ,GIBBERELLINS ,DNA methyltransferases - Abstract
Germline inactivating mutations in the BRCA1 gene lead to an increased lifetime risk of ovarian and breast cancer (BC). Most BRCA1-associated BC are triple-negative tumors (TNBC), aggressive forms of BC characterized by a lack of expression of estrogen and progesterone hormone receptors (HR) and HER2. How BRCA1 inactivation may favor the development of such a specific BC phenotype remains to be elucidated. To address this question, we focused on the role of miRNAs and their networks in mediating BRCA1 functions. miRNA, mRNA, and methylation data were retrieved from the BRCA cohort of the TCGA project. The cohort was divided into a discovery set (Hi-TCGA) and a validation set (GA-TCGA) based on the platform used for miRNA analyses. The METABRIC, GSE81002, and GSE59248 studies were used as additional validation data sets. BCs were differentiated into BRCA1-like and non-BRCA1-like based on an established signature of BRCA1 pathway inactivation. Differential expression of miRNAs, gene enrichment analysis, functional annotation, and methylation correlation analyses were performed. The miRNAs downregulated in BRCA1-associated BC were identified by comparing the miRNome of BRCA1-like with non-BRCA1-like tumors from the Hi-TCGA discovery cohort. miRNAs:gene-target anticorrelation analyses were then performed. The target genes of miRNAs downregulated in the Hi-TCGA series were enriched in the BRCA1-like tumors from the GA-TCGA and METABRIC validation data sets. Functional annotation of these genes revealed an over-representation of several biological processes ascribable to BRCA1 activity. The enrichment of genes related to DNA methylation was particularly intriguing, as this is an aspect of BRCA1 functions that has been poorly explored. We then focused on the miR-29:DNA methyltransferase network and showed that the miR-29 family, which was downregulated in BRCA1-like tumors, was associated with poor prognosis in these BCs and inversely correlated with the expression of the DNA methyltransferases DNMT3A and DNMT3B. This, in turn, correlated with the methylation extent of the promoter of HR genes. These results suggest that BRCA1 may control the expression of HR via a miR-29:DNMT3:HR axis and that disruption of this network may contribute to the receptor negative phenotype of tumors with dysfunctional BRCA1. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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- View/download PDF
33. Lethal and Sublethal Effects of Contact Insecticides and Horticultural Oils on the Hibiscus Bud Weevil, Anthonomus testaceosquamosus Linell (Coleoptera: Curculionidae).
- Author
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Greene, A. Daniel, Yang, Xiangbing, Velazquez-Hernandez, Yisell, Vargas, German, Kendra, Paul E., Mannion, Catharine, and Revynthi, Alexandra M.
- Subjects
CURCULIONIDAE ,HIBISCUS ,BEETLES ,INSECTICIDES ,PYRETHRINS ,HORTICULTURAL products ,IMIDACLOPRID - Abstract
Simple Summary: The invasive hibiscus bud weevil (HBW), Anthonomus testaceosquamosus Linell (Coleoptera: Curculionidae), has presented a challenge to ornamental nurseries in Florida since its arrival in 2017. Hibiscus flowers drop from plants because of HBW feeding and oviposition, which results in plants that are unattractive and subsequently not purchased by consumers. To help growers manage the HBW, we measured the lethal and sublethal effects on HBW adults caused by 21 different insecticide and horticultural oil products. Laboratory Experiments: Horticultural oil products only caused mortality when they were directly sprayed on HBW adults. Diflubenzuron, pyrethrins, spinetoram plus sulfoxaflor, and spirotetramat were selected for further analysis in Contact Toxicity Experiments and Greenhouse Experiments because these products caused either significant mortality and/or a reduction in feeding and oviposition in HBW adults. Contact Toxicity Experiments: Pyrethrins, spinetoram plus sulfoxaflor, and spirotetramat were highly toxic to HBW adults. Greenhouse Experiments: Pyrethrins application significantly reduced HBW adult feeding/oviposition on, and the number of larvae within, hibiscus buds. We recommend that HBW infestations be managed with rotations of diflubenzuron, pyrethrins, spinetoram plus sulfoxaflor, spirotetramat, and horticultural oils, as the rotation of products belonging to different insecticide groups can reduce the risk of resistance development while still providing control. In 2017, the hibiscus bud weevil (HBW), Anthonomus testaceosquamosus Linell (Coleoptera: Curculionidae), was found outside of its native range of Mexico and Texas, infesting hibiscus plants in Florida. Therefore, we selected 21 different insecticide and horticultural oil products to evaluate their effects on the reproductive rate, feeding, and oviposition behavior of the HBW. In laboratory experiments, significant mortality was observed in adult weevils exposed to diflubenzuron-treated hibiscus leaves and buds, and hibiscus buds treated with diflubenzuron contained the fewest number of eggs and feeding/oviposition holes. Among horticultural oil products, significant mortality was only observed in experiments in which adult weevils were directly sprayed (direct experiments). Pyrethrins and spinetoram plus sulfoxaflor reduced the oviposition rate and caused significant mortality in direct experiments. Diflubenzuron, pyrethrins, spinetoram plus sulfoxaflor, and spirotetramat were further tested via contact toxicity experiments and greenhouse experiments. Contact toxicity experiments demonstrated that the tested insecticides (except diflubenzuron) were highly toxic to HBW adults. In greenhouse experiments, only those hibiscus plants treated with pyrethrins had significantly fewer feeding/oviposition holes and larvae within their flower buds when compared to control (water-treated) plants. These results constitute an important first step in the identification of effective chemical control options for the HBW. [ABSTRACT FROM AUTHOR]
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- 2023
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34. LncRNA HOTAIRM1 functions in DNA double-strand break repair via its association with DNA repair and mRNA surveillance factors.
- Author
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Chuang, Tzu-Wei, Su, Chun-Hao, Wu, Pei-Yu, Chang, Yao-Ming, and Tarn, Woan-Yuh
- Published
- 2023
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35. A Review of Successes and Impeding Challenges of IoT-Based Insect Pest Detection Systems for Estimating Agroecosystem Health and Productivity of Cotton.
- Author
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Kiobia, Denis O., Mwitta, Canicius J., Fue, Kadeghe G., Schmidt, Jason M., Riley, David G., and Rains, Glen C.
- Subjects
INSECT pests ,MACHINE learning ,ARTIFICIAL intelligence ,PREDATORY insects ,AGRICULTURE ,DEEP learning ,ESTIMATES - Abstract
Using artificial intelligence (AI) and the IoT (Internet of Things) is a primary focus of applied engineering research to improve agricultural efficiency. This review paper summarizes the engagement of artificial intelligence models and IoT techniques in detecting, classifying, and counting cotton insect pests and corresponding beneficial insects. The effectiveness and limitations of AI and IoT techniques in various cotton agricultural settings were comprehensively reviewed. This review indicates that insects can be detected with an accuracy of between 70 and 98% using camera/microphone sensors and enhanced deep learning algorithms. However, despite the numerous pests and beneficial insects, only a few species were targeted for detection and classification by AI and IoT systems. Not surprisingly, due to the challenges of identifying immature and predatory insects, few studies have designed systems to detect and characterize them. The location of the insects, sufficient data size, concentrated insects on the image, and similarity in species appearance are major obstacles when implementing AI. Similarly, IoT is constrained by a lack of effective field distance between sensors when targeting insects according to their estimated population size. Based on this study, the number of pest species monitored by AI and IoT technologies should be increased while improving the system's detection accuracy. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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36. Unraveling the Roles of MW/UV/TiO 2 Photocatalysis Technologies for Organic Wastewater Treatment.
- Author
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Xia, Hui, Ahmad, Muhammad Arslan, Guo, Jungang, and Yang, Yuesuo
- Subjects
WASTEWATER treatment ,TITANIUM dioxide ,PHOTOCATALYSIS ,MICROWAVE heating ,PHOTODEGRADATION ,WATER quality ,IRRADIATION - Abstract
Microwave-induced oxidation and UV/TiO
2 photocatalytic technologies are widely used for organic wastewater treatment. Furthermore, the combination of these technologies (MW/UV/TiO2 ) result in a new advanced oxidation process. As a green and efficient photocatalytic degradation technology, MW/UV/TiO2 is favored for its advantages of high removal rate, short time use, wide concentration range, low cost, good stability, and no secondary pollution. Herein, this paper has summarized insights into the removal process by unveiling the degradation mechanism of organic compounds with MW-assisted technology. Additionally, water quality factors and process parameters affect the photocatalytic efficiencies, consisting of initial concentration, initial volume, TiO2 dosage, UV intensity, microwave power, temperature, pH, and fluid velocity, which have been systematically analyzed. Finally, possible future research directions and guidelines are proposed. Our findings will provide a way forward for the development of effective microwave-assisted remediation technologies that are broadly applicable to various environmental contamination scenarios. [ABSTRACT FROM AUTHOR]- Published
- 2023
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37. Occurrence, Distribution, Damage Potential, and Farmers' Perception on Fall Armyworm, Spodoptera frugiperda (J.E. Smith): Evidence from the Eastern Himalayan Region.
- Author
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Singh, Satyapriya, Raghuraman, Mahadevan, Keerthi, Manikyanahalli Chandrashekara, Das, Anup, Kar, Saswat Kumar, Das, Biswajit, Devi, Hidangmayum Lembisana, Sunani, Sunil Kumar, Sahoo, Manas Ranjan, Casini, Ryan, Elansary, Hosam O., and Acharya, Gobinda Chandra
- Abstract
The fall armyworm (FAW), Spodoptera frugiperda (J.E. Smith), is a polyphagous non-native pest identified as a serious threat to crop production and food security globally, including in India. Its unintentional introduction and quick coverage in large areas is a serious concern to millions of farmers in the eastern Himalayan region. However, detailed understanding of farmers' perceptions and the biological attributes associated with the meteorological factors for FAW is limited. The present investigation, which aimed to create baseline data on this pest, concurs with the idea that the FAW is widely dispersed throughout the maize ecosystems of Tripura, with an average infestation rate of 21.33 percent. The severity ranged from 0 to 1.40, with an average leaf damage score of 1 on a 0–4 categorical scale. The findings indicate that pheromone trap catch was significantly correlated with the evaporation rate as other meteorological factors influenced variably. The biological attributes imply that the life cycle was completed in 32.82 ± 0.08 days, with a high fecundity potential (1068.57 ± 4.35 numbers) in controlled conditions (25 ± 1 °C, 70 ± 5% RH). Indigenous natural enemies, such as entomopathogens, spiders, and wasps, were found to be the first defence against this invasive pest. A minority of the population (17.51%) was aware of the incidence of FAW. Furthermore, respondents' socio-demographic variables were associated significantly with FAW status. This is the first scientific report from the eastern Himalayan region about farmers' knowledge and awareness of the invasiveness of FAW. This finding enumerates a detailed understanding of FAW from diverse perspectives. Further, the concerted data provide an important baseline that could help the development of holistic management strategies for FAW. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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38. Phenotypic and Genotypic Characterization of Methicillin Resistance in Staphylococci Isolated from an Egyptian University Hospital.
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Abdelwahab, Marwa A., Amer, Wesam H., Elsharawy, Dalia, Elkolaly, Reham M., Helal, Rehab Abd El Fattah, El Malla, Dina Ahmed, Elfeky, Yomna G., Bedair, Hebatallah A., Amer, Rania S., Abd-Elmonsef, Marwa E., and Taha, Marwa S.
- Subjects
STAPHYLOCOCCUS ,METHICILLIN resistance ,GENOTYPES ,UNIVERSITY hospitals ,PHENOTYPES ,NOSOCOMIAL infections - Abstract
Methicillin-resistant in Staphylococci is a serious public health issue. It is mostly encoded by the mecA gene. The mecC gene is a new mecA analog responsible for resistance to methicillin in some Staphylococcal clinical isolates. This mecC gene is still underestimated in Egypt. The aim of the current study was to detect mecA and mecC genes in clinical Staphylococci isolates from a tertiary care university hospital in Egypt compared to the different phenotypic methods. A total of 118 Staphylococcus aureus (S. aureus) and 43 coagulase-negative Staphylococci (CoNS) were identified from various hospital-acquired infections. Methicillin resistance was identified genotypically using the PCR technique and phenotypically using the cefoxitin disc diffusion test, oxacillin broth microdilution and the VITEK2 system in all Staphylococcal isolates. The mecA gene was detected in 82.2% of S. aureus and 95.3% of CoNS isolates, while all of the isolates tested negative for the mecC gene. Interestingly, 30.2% of CoNS isolates showed the unique character of inducible oxacillin resistance, being mecA-positive but oxacillin-susceptible (OS-CoNS). The dual use of genotypic and phenotypic methods is highly recommended to avoid missing any genetically divergent strains. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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- View/download PDF
39. Conservation of transcriptional regulation by BRCA1 and BARD1 in Caenorhabditis elegans.
- Author
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Thapa, Ishor, Vahrenkamp, Russell, Witus, Samuel R, Lightle, Caitlin, Falkenberg, Owen, Sellin Jeffries, Marlo K, Klevit, Rachel E, and Stewart, Mikaela D
- Published
- 2023
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40. DNA Repair and Therapeutic Strategies in Cancer Stem Cells.
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Gillespie, Matthew S., Ward, Ciara M., and Davies, Clare C.
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THERAPEUTIC use of antineoplastic agents ,CARCINOGENESIS ,METABOLIC disorders ,CELL cycle ,STEM cells ,GENOMES ,DNA repair ,BREAST tumors ,DRUG resistance in cancer cells - Abstract
Simple Summary: A major theory of cancer development is that cancer originates from a specialised type of tumour cell called the cancer stem cell (CSC). Although CSCs comprise a relative subpopulation to the overall heterogeneous tumour mass, they are responsible for cancer establishment, progression, metastasis, and relapse. The eradication of CSCs is therefore vital for long-term patient remission and survival; however, achieving this is challenging as these cells are highly drug resistant compared to the bulk of cancer cells. CSC drug resistance is multifaceted, occurring through multiple extrinsic and intrinsic mechanisms, including an improved ability to repair chemo/radiotherapy-induced DNA lesions. This review summarises the evidence supporting the notion that CSCs display enhanced DNA repair efficiency relative to the bulk tumour population, the possible mechanisms by which this occurs, and discusses strategies of targeting the DNA damage response within CSCs to improve the efficacy of cancer treatment. First-line cancer treatments successfully eradicate the differentiated tumour mass but are comparatively ineffective against cancer stem cells (CSCs), a self-renewing subpopulation thought to be responsible for tumour initiation, metastasis, heterogeneity, and recurrence. CSCs are thus presented as the principal target for elimination during cancer treatment. However, CSCs are challenging to drug target because of numerous intrinsic and extrinsic mechanisms of drug resistance. One such mechanism that remains relatively understudied is the DNA damage response (DDR). CSCs are presumed to possess properties that enable enhanced DNA repair efficiency relative to their highly proliferative bulk progeny, facilitating improved repair of double-strand breaks induced by radiotherapy and most chemotherapeutics. This can occur through multiple mechanisms, including increased expression and splicing fidelity of DNA repair genes, robust activation of cell cycle checkpoints, and elevated homologous recombination-mediated DNA repair. Herein, we summarise the current knowledge concerning improved genome integrity in non-transformed stem cells and CSCs, discuss therapeutic opportunities within the DDR for re-sensitising CSCs to genotoxic stressors, and consider the challenges posed regarding unbiased identification of novel DDR-directed strategies in CSCs. A better understanding of the DDR mediating chemo/radioresistance mechanisms in CSCs could lead to novel therapeutic approaches, thereby enhancing treatment efficacy in cancer patients. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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41. Selectivity of Insecticides to a Pupal Parasitoid, Trichospilus diatraeae (Hymenoptera: Eulophidae), of Soybean Caterpillars.
- Author
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Pereira, Helter Carlos, Pereira, Fabricio Fagundes, Insabrald, Vitor Bortolanza, Rodrigues, Augusto, Lucchetta, Jéssica Terilli, Silva, Farley William Souza, Fernandes, Winnie Cezario, Carneiro, Zenilda de Fatima, Périgo, Pedro Henrique Breda, and Zanuncio, José Cola
- Subjects
THIAMETHOXAM ,INSECTICIDES ,EULOPHIDAE ,TUKEY'S test ,PEST control ,HYMENOPTERA ,DELTAMETHRIN - Abstract
Simple Summary: Lepidoptera caterpillars are important pests around the world that decrease crop production, including that of soybeans. The use of insecticides and bioinsecticides is the main control strategy for these pests. Biological control with parasitoids, in combination with insecticides, is widely used as an alternative. However, the use of insecticides with parasitoids depends on tests to assess the survival/mortality of these natural enemies for each insecticide. Trichospilus diatraeae Cherian & Margabandhu, 1942 (Hymenoptera: Eulophidae) is a polyphagous pupal parasitoid that mainly comprises defoliating lepidopterans. This study evaluated the mortality of T. diatraeae from seven insecticides (acephate, azadirachtin, Bacillus thuringiensis (Bt), deltamethrin, lufenuron, teflubenzuron and thiamethoxam + lambda-cyhalothrin). The insecticides were sprayed on soybean leaves, which were left to dry and placed in cages with 10 T. diatraeae females. The insecticides azadirachtin, Bt, lufenuron and teflubenzuron did not affect T. diatraeae survival; deltamethrin and thiamethoxam + lambda-cyhalothrin presented low toxicity; and acephate was highly toxic, causing 100% mortality in this parasitoid. Azadirachtin, Bt, lufenuron and teflubenzuron are selective for T. diatraeae. Selectivity is an important aspect of modern insecticides to be able to target pests whilst maintaining beneficial entomofauna in the crop. The present objective was to assess the selectivity of different insecticides for the pupal parasitoid of soybean caterpillars, i.e., Trichospilus diatraeae Cherian & Margabandhu, 1942 (Hymenoptera: Eulophidae). Acephate, azadirachtin, Bacillus thuringiensis (Bt), deltamethrin, lufenuron, teflubenzuron and thiamethoxam + lambda-cyhalothrin at the highest recommended concentrations for the soybean looper Chrysodeixis includens (Walker, [1858]) (Lepidoptera: Noctuidae), as well as water in the control, were used against the pupal parasitoid T. diatraeae. The insecticides and the control were sprayed on the soybean leaves, which were left to dry naturally and placed in cages with T. diatraeae females in each one. Survival data were submitted to analysis of variance (ANOVA) and the means were compared using Tukey's HSD test (α = 0.05). Survival curves were plotted according to the Kaplan–Meier method, and the pairs of curves were compared using the log-rank test at 5% probability. The insecticides azadirachtin, Bt, lufenuron and teflubenzuron did not affect T. diatraeae survival, while deltamethrin and thiamethoxam + lambda-cyhalothrin presented low toxicity and acephate was highly toxic, causing 100% mortality in the parasitoid. Azadirachtin, Bt, lufenuron and teflubenzuron are selective for T. diatraeae and could be used in IPM programs. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
42. Clinical Impact of Staphylococcus aureus Skin and Soft Tissue Infections.
- Author
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Linz, Matthew S., Mattappallil, Arun, Finkel, Diana, and Parker, Dane
- Subjects
SOFT tissue infections ,STAPHYLOCOCCUS aureus ,NECROTIZING fasciitis ,CLOSTRIDIOIDES difficile ,SKIN infections ,PATHOGENIC bacteria - Abstract
The pathogenic bacterium Staphylococcus aureus is the most common pathogen isolated in skin-and-soft-tissue infections (SSTIs) in the United States. Most S. aureus SSTIs are caused by the epidemic clone USA300 in the USA. These infections can be serious; in 2019, SSTIs with S. aureus were associated with an all-cause, age-standardized mortality rate of 0.5 globally. Clinical presentations of S. aureus SSTIs vary from superficial infections with local symptoms to monomicrobial necrotizing fasciitis, which can cause systemic manifestations and may lead to serious complications or death. In order to cause skin infections, S. aureus employs a host of virulence factors including cytolytic proteins, superantigenic factors, cell wall-anchored proteins, and molecules used for immune evasion. The immune response to S. aureus SSTIs involves initial responders such as keratinocytes and neutrophils, which are supported by dendritic cells and T-lymphocytes later during infection. Treatment for S. aureus SSTIs is usually oral therapy, with parenteral therapy reserved for severe presentations; it ranges from cephalosporins and penicillin agents such as oxacillin, which is generally used for methicillin-sensitive S. aureus (MSSA), to vancomycin for methicillin-resistant S. aureus (MRSA). Treatment challenges include adverse effects, risk for Clostridioides difficile infection, and potential for antibiotic resistance. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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43. Vancomycin heteroresistance among methicillin-resistant clinical isolates S. haemolyticus, S. hominis, S. simulans, and S. warneri.
- Author
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Szemraj, Magdalena, Lisiecki, Paweł, Glajzner, Paulina, and Szewczyk, Eligia M.
- Published
- 2023
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44. The Transcriptomic Response of the Boll Weevil, Anthonomus grandis grandis Boheman (Coleoptera: Curculionidae), following Exposure to the Organophosphate Insecticide Malathion.
- Author
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Perkin, Lindsey C., Cohen, Zachary P., Carlson, Jason W., and Suh, Charles P.-C.
- Subjects
MALATHION ,INSECTICIDES ,FENITROTHION ,CURCULIONIDAE ,BEETLES ,INSECTICIDE application ,SINGLE nucleotide polymorphisms - Abstract
Simple Summary: The boll weevil, Anthonomus grandis grandis Boheman (Coleoptera: Curculionidae), is a pest of commercial cotton in the Americas. Eradication programs in the United States (USA) have been very successful and have reduced boll weevil occurrence to a small region in South Texas. The programs have relied almost exclusively on the chemical insecticide malathion for over forty years to treat boll weevils in the field. Despite this heavy selection pressure, the boll weevil remains susceptible to field application rates of this insecticide. Here, we present findings from an RNA-seq experiment documenting gene expression post-exposure to field-relevant concentrations of malathion, which was used to glean information about the boll weevil's continued susceptibility to this insecticide. Additionally, we incorporated whole genome sequence data from nearly 200 pest individuals obtained from three distinct geographical areas (Texas, Mexico, and Argentina) to determine SNP frequency in the malathion target site: acetylcholine esterase. No evidence was found from gene expression or single nucleotide polymorphism (SNP) data consistent with a mechanism of enhanced tolerance or resistance adaptation in the boll weevil, corroborating long-term field observations. Insecticide tolerance and resistance have evolved countless times in insect systems. Molecular drivers of resistance include mutations in the insecticide target site and/or gene duplication, and increased gene expression of detoxification enzymes. The boll weevil, Anthonomus grandis grandis Boheman (Coleoptera: Curculionidae), is a pest of commercial cotton and has developed resistance in the field to several insecticides; however, the current organophosphate insecticide, malathion, used by USA eradication programs remains effective despite its long-term use. Here, we present findings from an RNA-seq experiment documenting gene expression post-exposure to field-relevant concentrations of malathion, which was used to provide insight on the boll weevil's continued susceptibility to this insecticide. Additionally, we incorporated a large collection of boll weevil whole-genome resequencing data from nearly 200 individuals collected from three geographically distinct areas to determine SNP allele frequency of the malathion target site, as a proxy for directional selection in response to malathion exposure. No evidence was found in the gene expression data or SNP data consistent with a mechanism of enhanced tolerance or resistance adaptation to malathion in the boll weevil. Although this suggests continued effectiveness of malathion in the field, we identified important temporal and qualitative differences in gene expression between weevils exposed to two different concentrations of malathion. We also identified several tandem isoforms of the detoxifying esterase B1 and glutathione S-transferases, which are putatively associated with organophosphate resistance. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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- View/download PDF
45. High-Gravity Fermentation for Bioethanol Production from Industrial Spent Black Cherry Brine Supplemented with Whey.
- Author
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Gómez Cardozo, Javier Ricardo, Beigbeder, Jean-Baptiste, Dantas, Julia Maria de Madeiros, and Lavoie, Jean-Michel
- Subjects
ETHANOL as fuel ,WHEY ,SALT ,FERMENTATION ,UREA ,CHERRIES ,SACCHAROMYCES cerevisiae - Abstract
By-products from different industries could represent an available source of carbon and nitrogen which could be used for bioethanol production using conventional Saccharomyces cerevisiae yeast. Spent cherry brine and whey are acid food by-products which have a high organic matter content and toxic compounds, and their discharges represent significant environmental and economic challenges. In this study, different combinations of urea, yeast concentrations, and whey as a nutrient source were tested for bioethanol production scale-up using 96-well microplates as well as 7.5 L to 100 L bioreactors. For bioethanol production in vials, the addition of urea allowed increasing the bioethanol yield by about 10%. Bioethanol production in the 7.5 L and 100 L bioreactors was 73.2 g·L
−1 and 103.5 g·L−1 with a sugar consumption of 81.5% and 94.8%, respectively, using spent cherry brine diluted into whey (200 g·L−1 of total sugars) supplemented with 0.5 g·L−1 urea and 0.5 g·L−1 yeast at 30 °C and a pH of 5.0 after 96 h of fermentation for both systems. The results allow these by-products to be considered low-economic-value alternatives for fuel- or food-grade bioethanol production. [ABSTRACT FROM AUTHOR]- Published
- 2023
- Full Text
- View/download PDF
46. Cellular mechanisms of the lufenuron growth regulator in adults of Anthonomus grandis (Coleoptera: Curculionidae).
- Author
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dos Santos Cruz, Glaucilane, Teixeira, Valeria Wanderley, da Nobrega Ferreira, Maria Clara, da Costa, Hilton Nobre, de Melo, Ismaela Maria Ferreira, Guedes, Carolina Arruda, Filho, Leucio Duarte Vieira, Neto, Clovis José Cavalcanti Lapa, and Teixeira, Álvaro Aguiar Coelho
- Subjects
GERMINAL vesicles ,GONADS ,CURCULIONIDAE ,BEETLES ,OXIDATIVE stress ,HYDROGEN peroxide - Abstract
Growth-regulating insecticides are used for several cotton pests when immature, and although not registered for Anthonomus grandis , their use causes a satisfactory population reduction in adults. However, it is not known which mechanisms are involved in this reduction. Thus, we studied which tissue and cellular changes may be involved in this process. Adults were fed with flower buds treated with lufenuron (4 ml commercial product /l) for 24 h. Then, the histology of the gonads, oxidative stress and apoptosis were evaluated after periods of 24 h and 48 h. Our study revealed that lufenuron activates the oxidative stress pathway in A. grandis , causing significant changes at the cellular level. These changes may have been caused by stimulation of the production of oxygen ions, free radicals and hydrogen peroxides, resulting in an increase in lipid peroxidation 48 h after treatment. These effects were confirmed by the presence of histopathologies in the gonads of this pest such as disorganization of the follicular cell epithelium, reduction of the yolk, disappearance of the germinal vesicle, reduction of sperm bundles and cysts. Such alterations injured the gonads and impaired tissue homeostasis. It is concluded that together these factors lead to a desirable population reduction when it comes to managing the pest in the field, because the aim is to keep it below the control level. In addition to this desired effect, it is worth noting that lufenuron is safer when compared to other commonly used products, another feature that makes its use quite interesting. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
47. Energy Assessment of Second-Generation (2G) Bioethanol Production from Sweet Sorghum (Sorghum bicolor (L.) Moench) Bagasse.
- Author
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López-Sandin, Iosvany, Rodríguez-Jasso, Rosa M., Gutiérrez-Soto, Guadalupe, Rosero-Chasoy, Gilver, Shiva, González-Gloria, K. D., and Ruiz, Héctor A.
- Subjects
SORGO ,SORGHUM ,BAGASSE ,ETHANOL as fuel ,ENERGY consumption ,RAW materials - Abstract
Sweet sorghum bagasse (SSB) provides a raw material rich in polysaccharides that can be converted into biofuel and other high-value-added bioproducts under the biorefinery concept. The aim of this study was to evaluate the effect of hydrothermal pretreatment on the availability of SSB fermentable sugars for bioethanol production, considering the energy balance of the process. For this, the biomass was subjected to one process, pre-saccharification simultaneous and fermentation (PSSF). Previously, the temperature, time, and particle size effect were determined, as well as the enzymatic load for the more significant release of monomeric sugars. It was observed that the increase in the pretreatment severity, defined by the severity factor [log(R
o )], resulted in a more significant release of sugar and energy consumption. In the PSSF, bioethanol production was 22.17 g/L, with a total energy consumption of 2.46 MJ/g of processed biomass, of which 79.14% was by concept of electricity. [ABSTRACT FROM AUTHOR]- Published
- 2022
- Full Text
- View/download PDF
48. Locus-Specific Isolation of the Nanog Chromatin Identifies Regulators Relevant to Pluripotency of Mouse Embryonic Stem Cells and Reprogramming of Somatic Cells.
- Author
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Burramsetty, Arun Kumar, Nishimura, Ken, Kishimoto, Takumi, Hamzah, Muhammad, Kuno, Akihiro, Fukuda, Aya, and Hisatake, Koji
- Subjects
SOMATIC cells ,EMBRYONIC stem cells ,RNA-binding proteins ,CHROMATIN ,PROTEOMICS ,PROMOTERS (Genetics) ,PLURIPOTENT stem cells - Abstract
Pluripotency is a crucial feature of pluripotent stem cells, which are regulated by the core pluripotency network consisting of key transcription factors and signaling molecules. However, relatively less is known about the molecular mechanisms that modify the core pluripotency network. Here we used the CAPTURE (CRISPR Affinity Purification in situ of Regulatory Elements) to unbiasedly isolate proteins assembled on the Nanog promoter in mouse embryonic stem cells (mESCs), and then tested their functional relevance to the maintenance of mESCs and reprogramming of somatic cells. Gene ontology analysis revealed that the identified proteins, including many RNA-binding proteins (RBPs), are enriched in RNA-related functions and gene expression. ChIP-qPCR experiments confirmed that BCLAF1, FUBP1, MSH6, PARK7, PSIP1, and THRAP3 occupy the Nanog promoter region in mESCs. Knockdown experiments of these factors show that they play varying roles in self-renewal, pluripotency gene expression, and differentiation of mESCs as well as in the reprogramming of somatic cells. Our results show the utility of unbiased identification of chromatin-associated proteins on a pluripotency gene in mESCs and reveal the functional relevance of RBPs in ESC differentiation and somatic cell reprogramming. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
49. Local Agricultural Management Filters Morphological Traits of the South American Palm Weevil (Rhynchophorus palmarum L.; Coleoptera: Curculionidae) in Ornamental Palm Plantations.
- Author
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Ponce-Méndez, Moises, García-Martínez, Miguel A., Serna-Lagunes, Ricardo, Lasa-Covarrubias, Rodrigo, Presa-Parra, Ehdibaldo, Murguía-González, Joaquin, and Llarena-Hernández, Carlos
- Subjects
CURCULIONIDAE ,BEETLES ,DECORATION & ornament ,INSECT pests ,PALMS ,PLANTATIONS - Abstract
Insect pests show phenotypic plasticity as a function of resource availability and limiting conditions. Although Rhynchophorus palmarum displays high variation in certain morphological traits, it is still not clear how and which of these are being filtered along agricultural management gradients in palm plantations. This study assesses the influence of biophysical structure of ornamental palm plantations and agrochemical use on morphological traits of adults in 15 permanent plots of ornamental palm plantations in Veracruz, Mexico. A total of 4972 adults were and their body length, pronotum width, rostrum length, and mesothorax depth were measured. Body length and mesothorax depth of adults of both sexes were greater in plantations with a high diversity of palm species and frequency of fertilizer use. Rostrum length of females increased as a function of palm density, and pronotum width of both sexes was positively related with the use of insecticides. Local characteristics of agricultural management of palm plantations might filter integrated, adaptative, and environment-specific phenotypes. This is the first ecological study of the south American palm weevil that provides new insights on the current intensive management of ornamental palm plantations that far from controlling, benefits current geographic expansion, demographic outbreak, and economic impact of this pest. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
50. Biotic Potential Induced by Different Host Plants in the Fall Armyworm, Spodoptera frugiperda (Lepidoptera: Noctuidae).
- Author
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Altaf, Nimra, Idrees, Atif, Ullah, Muhammad Irfan, Arshad, Muhammad, Afzal, Ayesha, Afzal, Muhammad, Rizwan, Muhammad, and Li, Jun
- Subjects
FALL armyworm ,HOST plants ,NOCTUIDAE ,LEPIDOPTERA ,LIFE cycles (Biology) ,CORN - Abstract
Simple Summary: Fall armyworm, Spodoptera frugiperda (Lepidoptera: Noctuidae), is an economically important insect pest of corn crops globally. However, some other host plants on which this pest can successfully complete its generation have also been reported. Our main objective was to study the biology of fall armyworm feeding on maize, sorghum, wheat, and rice. Our overall findings show that maize is the most preferred host plant; however, the pest completed the life cycle successfully on sorghum and wheat. The survival rate was low when rice leaves were provided to larvae as diet, suggesting that rice is a non-preferred host plant. Fall armyworm, Spodoptera frugiperda (J.E. Smith) (Lepidoptera: Noctuidae), is a polyphagous insect pest of many important crops. To evaluate the influence of host plants on the biology and survival of the Pakistani population of S. frugiperda, we examined life table parameters of S. frugiperda raised on maize, sorghum, wheat, and rice. The development rate was significantly higher on the maize crop than on the other three host plants. Different larval diets affected development time and fecundity. S. frugiperda attained the fastest larval development (16 days) on maize and the slowest development (32.74 days) on rice. Adult females from maize-fed larvae laid 1088 eggs/female, those from sorghum-fed larvae laid 591.6 eggs/female, those from wheat-fed larvae laid 435.6 eggs/female, and those from rice-fed larvae laid 49.6 eggs/female. Age stage-specific parameters also indicated the higher fecundity, higher life expectancy, and higher survival of S. frugiperda on maize plants than on the other three hosts. Larval diets had a significant varying effect on the finite and intrinsic increase rates, reflecting that maize was the most suitable diet. The findings of the present study are useful for predicting population dynamics especially in areas cultivating Poaceae crops, except maize, to develop sustainable integrated pest management strategies for this pest. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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