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This paper presents the results of a study on the isotopic ecology of guanacos in central western Argentina. We examine the historical population ecology of guanacos using stable isotope analysis of bone collagen from pre-Hispanic and modern guanaco populations (n = 129), considering variability in two ecoregions: the Monte hot desert and the Andean-Patagonian cold desert. Our study addresses the consistency of guanaco diets over time, evaluating palaeoecology to provide information for conservation of this taxon. We found significant differences in isotopic niche size between modern and archaeological guanacos. When analyzed by ecoregion, there were significant differences in niche size through time, indicating that guanacos had distinctive dietary habits and occupied different ecological niches across the ecoregions. Comparing Standard Ellipse Areas (SEA) through time and across space, we observed that the archaeological SEA for guanacos is smaller than its modern counterpart in the Andean-Patagonia ecoregion. Conversely, in Monte, the archaeological SEA is larger than the one established for modern samples. The contrast between pre-Hispanic and modern populations highlight the impact of human activity and conservation efforts on the distribution and ecology of guanacos. These findings have important implications for understanding guanaco ecology with consequences for conservation policies. [ABSTRACT FROM AUTHOR]