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The paper deals with the seed morphology and anatomy of 32 wild Indian Musaceae by using light microscopy (LM) and scanning electron microscopy (SEM). This is the first comprehensive investigation into the seed micro-morphological and anatomical aspects of two genera of the family. Seed characters including shape, size, surface sculpturing (LM and SEM), seed coat thickness, layer characters and chalazal chamber column were considered. Seed characters play a significant role in the delimitation of taxa as they are more stable than vegetative (anatomical) and pollen features. Four types of seeds (oblate, ovoid, sub-globose and ellipsoid) were observed in the family, oblate seeds being the most common. LM revealed that most of the seeds have verrucate surface sculpturing, but some are smooth-verrucate or smooth. Seed size also plays an important role in the identification of the taxa to some extent. Number of layers and seed coat thickness are directly proportional to seed size. However, the thickness of endotesta, tegmen and inner endosperm layers (aleurone layers) differ in small and large seeds. The present study revealed eight types of outer sculpturing and three inner sculpturing patterns with diverse nature of anticlinal and periclinal cell walls. Based on the seed characters, a phenetic analysis was also carried out. [ABSTRACT FROM AUTHOR]