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This paper investigates the conformal isometry hypothesis as a potential explanation for the emergence of hexagonal periodic patterns in the response maps of grid cells. The hypothesis posits that the activities of the population of grid cells form a high-dimensional vector in the neural space, representing the agent's self-position in 2D physical space. As the agent moves in the 2D physical space, the vector rotates in a 2D manifold in the neural space, driven by a recurrent neural network. The conformal isometry hypothesis proposes that this 2D manifold in the neural space is a conformally isometric embedding of the 2D physical space, in the sense that local displacements of the vector in neural space are proportional to local displacements of the agent in the physical space. Thus the 2D manifold forms an internal map of the 2D physical space, equipped with an internal metric. In this paper, we conduct numerical experiments to show that this hypothesis underlies the hexagon periodic patterns of grid cells. We also conduct theoretical analysis to further support this hypothesis. In addition, we propose a conformal modulation of the input velocity of the agent so that the recurrent neural network of grid cells satisfies the conformal isometry hypothesis automatically. To summarize, our work provides numerical and theoretical evidences for the conformal isometry hypothesis for grid cells and may serve as a foundation for further development of normative models of grid cells and beyond., Comment: arXiv admin note: text overlap with arXiv:2310.19192

Grid cells in the entorhinal cortex of mammalian brains exhibit striking hexagon grid firing patterns in their response maps as the animal (e.g., a rat) navigates in a 2D open environment. In this paper, we study the emergence of the hexagon grid patterns of grid cells based on a general recurrent neural network (RNN) model that captures the navigation process. The responses of grid cells collectively form a high dimensional vector, representing the 2D self-position of the agent. As the agent moves, the vector is transformed by an RNN that takes the velocity of the agent as input. We propose a simple yet general conformal normalization of the input velocity of the RNN, so that the local displacement of the position vector in the high-dimensional neural space is proportional to the local displacement of the agent in the 2D physical space, regardless of the direction of the input velocity. We apply this mechanism to both a linear RNN and nonlinear RNNs. Theoretically, we provide an understanding that explains the connection between conformal normalization and the emergence of hexagon grid patterns. Empirically, we conduct extensive experiments to verify that conformal normalization is crucial for the emergence of hexagon grid patterns, across various types of RNNs. The learned patterns share similar profiles to biological grid cells, and the topological properties of the patterns also align with our theoretical understanding.

The activity of the grid cell population in the medial entorhinal cortex (MEC) of the mammalian brain forms a vector representation of the self-position of the animal. Recurrent neural networks have been proposed to explain the properties of the grid cells by updating the neural activity vector based on the velocity input of the animal. In doing so, the grid cell system effectively performs path integration. In this paper, we investigate the algebraic, geometric, and topological properties of grid cells using recurrent network models. Algebraically, we study the Lie group and Lie algebra of the recurrent transformation as a representation of self-motion. Geometrically, we study the conformal isometry of the Lie group representation where the local displacement of the activity vector in the neural space is proportional to the local displacement of the agent in the 2D physical space. Topologically, the compact abelian Lie group representation automatically leads to the torus topology commonly assumed and observed in neuroscience. We then focus on a simple non-linear recurrent model that underlies the continuous attractor neural networks of grid cells. Our numerical experiments show that conformal isometry leads to hexagon periodic patterns in the grid cell responses and our model is capable of accurate path integration. Code is available at \url{https://github.com/DehongXu/grid-cell-rnn}.

A central goal of neuroscience is to understand the representations formed by brain activity patterns and their connection to behavior. The classical approach is to investigate how individual neurons encode the stimuli and how their tuning determines the fidelity of the neural representation. Tuning analyses often use the Fisher information to characterize the sensitivity of neural responses to small changes of the stimulus. In recent decades, measurements of large populations of neurons have motivated a complementary approach, which focuses on the information available to linear decoders. The decodable information is captured by the geometry of the representational patterns in the multivariate response space. Here we review neural tuning and representational geometry with the goal of clarifying the relationship between them. The tuning induces the geometry, but different sets of tuned neurons can induce the same geometry. The geometry determines the Fisher information, the mutual information, and the behavioral performance of an ideal observer in a range of psychophysical tasks. We argue that future studies can benefit from considering both tuning and geometry to understand neural codes and reveal the connections between stimulus, brain activity, and behavior., Comment: 42 pages, 6 figures