41 results on '"Shomura Y"'
Search Results
2. [NiFe]-hydrogenase (Hyb-type) from Citrobacter sp. S-77 in an air-oxidized condition
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Nishikawa, K., primary, Matsuura, H., additional, Muhd Noor, N.D., additional, Tai, H., additional, Hirota, S., additional, Kim, J., additional, Kang, J., additional, Tateno, M., additional, Yoon, K.S., additional, Ogo, S., additional, Shomura, Y., additional, and Higuchi, Y., additional
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- 2018
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3. [NiFe]-hydrogenase (Hyb-type) from Citrobacter sp. S-77 in an H2-reduced condition
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Nishikawa, K., primary, Matsuura, H., additional, Muhd Noor, N.D., additional, Tai, H., additional, Hirota, S., additional, Kim, J., additional, Kang, J., additional, Tateno, M., additional, Yoon, K.S., additional, Ogo, S., additional, Shomura, Y., additional, and Higuchi, Y., additional
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- 2018
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4. [NiFe]-hydrogenase (Hyb-type) from Citrobacter sp. S-77 in a ferricyanide-oxidized condition
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Nishikawa, K., primary, Matsuura, H., additional, Muhd Noor, N.D., additional, Tai, H., additional, Hirota, S., additional, Kim, J., additional, Kang, J., additional, Tateno, M., additional, Yoon, K.S., additional, Ogo, S., additional, Shomura, Y., additional, and Higuchi, Y., additional
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- 2018
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5. Structural basis of the redox switches in the NAD + -reducing soluble [NiFe]-hydrogenase
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Shomura, Y., primary, Taketa, M., additional, Nakashima, H., additional, Tai, H., additional, Nakagawa, H., additional, Ikeda, Y., additional, Ishii, M., additional, Igarashi, Y., additional, Nishihara, H., additional, Yoon, K.-S., additional, Ogo, S., additional, Hirota, S., additional, and Higuchi, Y., additional
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- 2017
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6. Crystal structure of NAD+-reducing [NiFe]-hydrogenase in the air-oxidized state
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Shomura, Y., primary, Taketa, M., additional, Nakashima, H., additional, Tai, H., additional, Nakagawa, H., additional, Ikeda, Y., additional, Ishii, M., additional, Igarashi, Y., additional, Nishihara, H., additional, Yoon, K.S., additional, Ogo, S., additional, Hirota, S., additional, and Higuchi, Y., additional
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- 2017
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7. Crystal structure of NAD+-reducing [NiFe]-hydrogenase in the H2-reduced state
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Shomura, Y., primary, Taketa, M., additional, Nakashima, H., additional, Tai, H., additional, Nakagawa, H., additional, Ikeda, Y., additional, Ishii, M., additional, Igarashi, Y., additional, Nishihara, H., additional, Yoon, K.S., additional, Ogo, S., additional, Hirota, S., additional, and Higuchi, Y., additional
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- 2017
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8. Membrane-bound respiratory [NiFe]-hydrogenase from Hydrogenovibrio marinus in a ferricyanide-oxidized condition
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Shomura, Y., primary, Yoon, K.S., additional, Nishihara, H., additional, and Higuchi, Y., additional
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- 2017
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9. Heterodimer constructed from PA cyt c551-HT cyt c552 and HT cyt c552-PA cyt c551 chimeric proteins
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Zhang, M., primary, Nakanishi, T., additional, Yamanaka, M., additional, Nagao, S., additional, Yanagisawa, S., additional, Shomura, Y., additional, Shibata, N., additional, Ogura, T., additional, Higuchi, Y., additional, and Hirota, S., additional
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- 2017
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10. Heterodimer constructed from M61A PA cyt c551-HT cyt c552 and HT cyt c552-PA cyt c551 chimeric proteins
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Zhang, M., primary, Nakanishi, T., additional, Yamanaka, M., additional, Nagao, S., additional, Yanagisawa, S., additional, Shomura, Y., additional, Shibata, N., additional, Ogura, T., additional, Higuchi, Y., additional, and Hirota, S., additional
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- 2017
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11. Domain-swapped cytochrome cb562 dimer
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Miyamoto, T., primary, Kuribayashi, M., additional, Nagao, S., additional, Shomura, Y., additional, Higuchi, Y., additional, and Hirota, S., additional
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- 2015
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12. Hydrogenobacter thermophilus cytochrome c552 dimer formed by domain swapping at N-terminal region
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Ren, C., primary, Nagao, S., additional, Yamanaka, M., additional, Kamikubo, H., additional, Komori, H., additional, Shomura, Y., additional, Higuchi, Y., additional, and Hirota, S., additional
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- 2015
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13. Hydrogenobacter thermophilus cytochrome c552 dimer formed by domain swapping at C-terminal region
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Ren, C., primary, Nagao, S., additional, Yamanaka, M., additional, Komori, H., additional, Shomura, Y., additional, Higuchi, Y., additional, and Hirota, S., additional
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- 2015
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14. Long-term results of the frozen elephant trunk technique in primary chronic type B aortic dissection.
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Ito H, Bessho S, Shomura Y, Kato N, Kanemitsu S, Mizumoto T, Hirano K, Maze Y, Tokui T, and Takao M
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- Humans, Middle Aged, Male, Female, Aged, Retrospective Studies, Chronic Disease, Treatment Outcome, Blood Vessel Prosthesis, Time Factors, Risk Factors, Postoperative Complications epidemiology, Postoperative Complications etiology, Aortic Dissection surgery, Aortic Dissection mortality, Blood Vessel Prosthesis Implantation methods, Blood Vessel Prosthesis Implantation adverse effects, Blood Vessel Prosthesis Implantation instrumentation, Blood Vessel Prosthesis Implantation mortality, Aortic Aneurysm, Thoracic surgery, Aortic Aneurysm, Thoracic mortality, Stents, Endovascular Procedures methods, Endovascular Procedures adverse effects, Endovascular Procedures instrumentation
- Abstract
Objectives: The aim of this study is to analyze long-term results of the total aortic arch replacement with the frozen elephant trunk technique for primary chronic type B aortic dissection., Methods: Among 322 patients who had the frozen elephant trunk technique, 43 (13.4%) patients (median age, 64.0 years) with primary chronic type B aortic dissection were analyzed. The patients underwent surgery at a median of 27.0 months after the onset of aortic dissection. The false lumen was patent in 30 (69.8%) patients preoperatively., Results: Two patients suffered paraplegia and another died of cerebral infarction. Complete thrombosis of the peri-stent false lumen was achieved in 36 (83.7%) patients. Overall survival, freedom from aortic events, and freedom from aortic reintervention were 83.5%, 37.2%, and 42.2% at 5 years, respectively. Survival rates of the patients with or without aortic events were 75.0% and 95.8% at 5 years (Log-rank, p = 0.22). Late aortic events occurred in 19 (44.2%) patients including distal stent graft-induced new entry, type Ib endoleak, and false lumen dilation. The ratio of the stent graft diameter to the preoperative short axis diameter of the true lumen (hazard ratio, 1.90; 95% confidence interval, 1.01-3.59), and the maximal diameter of a postdissection aneurysm (1.07; 1.01-1.12) were the significant multivariate risk predictors of late aortic events., Conclusions: Late aortic events occurr fairly frequently, and new strategies need to be explored to enhance the effectiveness of this procedure in the future., (© 2024. The Author(s), under exclusive licence to The Japanese Association for Thoracic Surgery.)
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- 2024
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15. Left ventricular perforation by Impella 5.5 during surgery for postinfarction ventricular septal rupture.
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Ito H, Bessho S, Shomura Y, Moriwaki K, Dohi K, and Takao M
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Background: The perioperative use of the Impella 5.5 has been increasing recently; however, the left ventricular perforation by this device during surgery has not been reported to date., Case Presentation: Postinfarction ventricular septal rupture in a 75-year-old man was successfully repaired with support of a single Impella 5.5 device used for consecutive 28 days perioperatively. The patient underwent surgery after 16 days of Impella support. During surgery, the Impella was left in place expecting its use for left ventricular unloading after the operation. After aortic cross-clamp, when the apex was carefully lifted, the tip of the Impella almost protruded from the posterior wall, and could be seen through the epicardium. The aorta was unclamped briefly, the Impella was pulled out several centimeters, and the aorta was cross-clamped again. The ventricular septal rupture was repaired by the double-layer patch technique via the right ventricle. Immediately before the chest closure, the free wall of the LV ruptured and blood rapidly flowed out. It was where the Impella almost protruded during cardiac arrest, and was repaired with a pledgeted monofilament mattress suture., Conclusions: A single device can be used throughout perioperative periods; however, if used during surgery, possible risk of left ventricular perforation should be well recognized since the device has no soft pigtail part at its end, and its stiff tip can directly contact the decompressed, flaccid ventricular wall during cardiac arrest., (© 2024. The Author(s).)
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- 2024
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16. Bilateral pulmonary artery banding facilitates the systemic ventricular outflow tract growth for biventricular and univentricular repair candidates of complex arch anomaly.
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Yamasaki T, Umezu K, Toba S, Ishikawa R, Bessho S, Ito H, Shomura Y, Ohashi H, Sawada H, Mitani Y, Shimpo H, and Takao M
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- Humans, Retrospective Studies, Male, Female, Infant, Treatment Outcome, Echocardiography, Child, Preschool, Heart Defects, Congenital surgery, Heart Defects, Congenital physiopathology, Heart Defects, Congenital diagnosis, Univentricular Heart surgery, Univentricular Heart physiopathology, Child, Infant, Newborn, Pulmonary Artery surgery, Pulmonary Artery diagnostic imaging, Pulmonary Artery abnormalities, Aorta, Thoracic surgery, Aorta, Thoracic diagnostic imaging, Aorta, Thoracic abnormalities, Cardiac Surgical Procedures methods, Heart Ventricles diagnostic imaging, Heart Ventricles abnormalities, Heart Ventricles surgery, Heart Ventricles physiopathology
- Abstract
Various surgical approaches address complex heart disease with arch anomalies. Bilateral pulmonary artery banding (bPAB) is a strategy for critically ill patients with complex arch anomalies. Some reports argued the potential effect of bPAB on the growth of the left ventricular outflow tract (LVOT) during inter-stage after bPAB. This study aimed to analyze the LVOT growth for biventricular repair candidates with arch anomaly and systemic ventricular outflow tract (SVOT) for univentricular repair candidates with arch anomaly. This retrospective study analyzed 17 patients undergoing initial bPAB followed by arch repair. The Z-scores of LVOT and SVOT were compared between pre-bPAB and pre-arch repair. Patient characteristics, transthoracic echocardiogram data, and PAB circumferences were reviewed. The diameter of the minimum LVOT for biventricular repair (BVR) candidates, the pulmonary valve (neo-aortic valve, neo-AoV) and the pulmonary trunk (the neo-ascending aorta, neo-AAo) for univentricular repair (UVR) candidates, and the degree of aortic or neo-aortic insufficiency in each candidate was statistically analyzed. 17 patients were divided into the UVR candidates (group U) with 9 patients and the BVR candidates (group B) with 8 patients. In group B, the median value of the Z-score of the minimum LVOT increased from -3.2 (range: - 4.1 ~ - 1.0) at pre-PAB to -2.8 (range: - 3.6 ~ - 0.3) at pre-arch repair with a significant difference (p = 0.012). In group U, the median value of the Z-score of the neo-AoV increased from 0.5 (range: - 1.0 ~ 1.7) at pre-bPAB to 1.2 (range: 0.2 ~ 1.9) at pre-arch repair with a significant difference (p < 0.01). The median value of the Z-score of the neo-AAo was also increased from 3.1 (range: 1.5 ~ 4.6) to 4.3 (range: 3.1 ~ 5.9) with a significant difference (p = 0.028). The growth of the LVOT for BVR candidates and SVOT for UVR candidates during the inter-stage between bPAB and arch repair was observed. These results suggest the potential advantage of bPAB in surgical strategies. Further research is needed to validate these findings and refine surgical approaches., (© 2024. Springer Nature Japan KK, part of Springer Nature.)
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- 2024
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17. Hemolytic Anemia Caused by Graft Kinking Following Ascending Aortic Replacement: Endovascular Treatment With a Palmaz XL Stent.
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Kato H, Kato N, Ouchi T, Higashigawa T, Bessho S, Shomura Y, Ichikawa Y, and Sakuma H
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- Aged, Humans, Male, Aorta surgery, Stents, Treatment Outcome, Anemia, Hemolytic etiology, Anemia, Hemolytic surgery, Blood Vessel Prosthesis Implantation adverse effects, Endovascular Procedures
- Abstract
A 66-year-old man presented with hemolytic anemia, which required frequent blood transfusion, 6 months after surgical repair of an ascending aortic pseudoaneurysm. Hemolysis was attributed to luminal stenosis caused by graft kinking by laboratory test, CT and four-dimensional magnetic resonance imaging. First, an Excluder cuff was placed at the stenotic site under rapid pacing, but it migrated distally. Thereafter a Palmaz XL stent was placed at the stenotic site, which led to resolution of anemia. In this case, a Palmaz XL stent was successfully used to treat hemolytic anemia caused by graft kinking following ascending aortic surgery., Competing Interests: Declaration of Conflicting InterestsThe author(s) declared no potential conflicts of interest with respect to the research, authorship, and/or publication of this article.
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- 2024
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18. An ependymin-related blue carotenoprotein decorates marine blue sponge.
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Kawasaki S, Kaneko T, Asano T, Maoka T, Takaichi S, and Shomura Y
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Marine animals display diverse vibrant colors, but the mechanisms underlying their specific coloration remain to be clarified. Blue coloration is known to be achieved through a bathochromic shift of the orange carotenoid astaxanthin (AXT) by the crustacean protein crustacyanin, but other examples have not yet been well investigated. Here, we identified an ependymin (EPD)-related water-soluble blue carotenoprotein responsible for the specific coloration of the marine blue sponge Haliclona sp. EPD was originally identified in the fish brain as a protein involved in memory consolidation and neuronal regeneration. The purified blue protein, designated as EPD-related blue carotenoprotein-1, was identified as a secreted glycoprotein. We show that it consists of a heterodimer that binds orange AXT and mytiloxanthin and exhibits a bathochromic shift. Our crystal structure analysis of the natively purified EPD-related blue carotenoprotein-1 revealed that these two carotenoids are specifically bound to the heterodimer interface, where the polyene chains are aligned in parallel to each other like in β-crustacyanin, although the two proteins are evolutionary and structurally unrelated. Furthermore, using reconstitution assays, we found that incomplete bathochromic shifts occurred when the protein bound to only AXT or mytiloxanthin. Taken together, we identified an EPD in a basal metazoan as a blue protein that decorates the sponge body by binding specific structurally unrelated carotenoids., Competing Interests: Conflict of interest The authors declare that they have no conflicts of interest with the contents of this article., (Copyright © 2023 The Authors. Published by Elsevier Inc. All rights reserved.)
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- 2023
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19. Rare Case of Acute Closed Type B Aortic Dissection Complicated by Giant Left Subclavian Artery Aneurysm.
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Yanagisawa M, Fujimoto N, Fujita S, Higashigawa T, Shomura Y, and Dohi K
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Competing Interests: None declared.
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- 2023
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20. Snake Technique in Osler's Disease-Associated Thoracoabdominal Aortic Aneurysm.
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Bessho S, Ito H, Nakamura B, Shomura Y, Ogihara Y, Yamada N, and Takao M
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- Activin Receptors, Type II, Aged, Animals, Female, Humans, Snakes, Aortic Aneurysm, Thoracic complications, Aortic Aneurysm, Thoracic diagnosis, Aortic Aneurysm, Thoracic surgery, Arteriovenous Malformations complications, Telangiectasia, Hereditary Hemorrhagic complications, Telangiectasia, Hereditary Hemorrhagic surgery, Telangiectasis complications
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Osler's disease is an autosomal dominant disorder characterized by epistaxis, telangiectases, and arteriovenous malformations of the internal organs. Herein, we report the first published case of dissecting thoracoabdominal aortic aneurysm repair in a 66-year-old woman with hereditary hemorrhagic telangiectasia associated with ACVRL1 gene mutations. We maintained the activated clotting time around 400 seconds during cardiopulmonary bypass to avoid lethal hemorrhage from telangiectases or arteriovenous malformations. The Adamkiewicz artery could not be identified on imaging studies preoperatively. Therefore, we used the snake technique for intercostal revascularization, which was effective in preventing paraplegia., (Copyright © 2022 The Society of Thoracic Surgeons. Published by Elsevier Inc. All rights reserved.)
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- 2022
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21. Transmitral extraction of a huge left ventricular mural thrombus using a novel mitral leaflet retractor.
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Ito H, Bessho S, Nakamura B, Toba S, Shomura Y, and Takao M
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A 52-year-old woman with a past history of anterior myocardial infarction 15 years previously was found to have a pedunculated mobile thrombus with a narrow stalk originating from the left ventricle, and a huge laminated mural thrombus. Surgical extraction of the two organized thrombi was successfully performed with transmitral approach using a novel, flexible, self-retained, and reusable leaflet retractor, which was originally developed for exposure of the subvalvular apparatus during mitral valve repair. Excellent access, exposure, and visualization of the left ventricle were achieved by this heart valve retractor and an endoscope for removal of a huge mural thrombus., Competing Interests: The authors declare no conflicts of interest., (© 2022 The Authors. Clinical Case Reports published by John Wiley & Sons Ltd.)
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- 2022
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22. Impact of valvuloarterial impedance on left ventricular reverse remodeling after aortic valve neocuspidization.
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Yamamoto N, Ito H, Inoue K, Futsuki A, Hirano K, Shomura Y, Ozu Y, Katayama Y, Komada T, and Takao M
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- Aged, Electric Impedance, Humans, Retrospective Studies, Ventricular Remodeling, Aortic Valve diagnostic imaging, Aortic Valve surgery, Aortic Valve Stenosis
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Background: Aortic valve neocuspidization (AVNeo) has emerged as a promising aortic valve procedure, and is expected to have a larger effective orifice area (EOA) than commercially available bioprostheses. It is, however, unclear which indices could facilitate left ventricular (LV) reverse remodeling after AVNeo. The aim of this study is to verify the impact of global left ventricular afterload on the LV reverse remodeling following AVNeo., Methods: Data-available consecutive 38 patients (median age, 77; interquartile range, 72.8-82.0) undergoing AVNeo for severe aortic stenosis were enrolled in this study. Preoperative and the last follow-up echocardiographic data were retrospectively analyzed including the valvuloarterial impedance (Zva), a marker of global LV afterload. Reduction in LV geometry index (LVGI) and relative wall thickness (RWT) were used as an indicator for LV reverse remodeling., Results: The Zva reduced in 24 patients (63.2%) during the follow-up period (median, 12 months). Reduction in Zva significantly correlated to improvement of LV geometry (LVGI (r = 0.400, p = 0.013) and RWT (r = 0.627, p < 0.001)), whereas increase in EOA index did not significantly correlate to LVGI (r = 0.009, p = 0.957), or RWT (r = 0.105, p = 0.529)). The reduction in Zva was the multivariate predictor of LV reverse remodeling., Conclusions: Low global LV afterload led to significant LV reverse remodeling even after AVNeo, which could achieve better valve performance than the conventional bioprostheses., (© 2022. The Author(s).)
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- 2022
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23. Identification of a small pericardial effusion on contrast-enhanced computed tomography indicating cardiac perforation and pericardial injury following blunt trauma: A case report.
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Esumi R, Kaneko T, Akama Y, Shinkai T, Ieki Y, Bessho S, Shomura Y, and Imai H
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Blunt trauma may cause cardiac perforation requiring emergency surgical repair. Cardiac perforations are usually diagnosed by the presence of a pericardial effusion on echocardiography. However, cardiac perforations and pericardial effusions are sometimes too small to detect, resulting in underdiagnosis. In this case report, we describe a 22-year-old man who was involved in a traffic accident, admitted in a state of shock, and was initially treated for tension pneumothorax and liver and spleen injuries. His initial computed tomography scans revealed a small region of enhancement, corresponding to a small pericardial effusion, indicative of a cardiac perforation. Thus, an emergency median sternotomy was performed. He was diagnosed with perforation of the left atrial ear and right atrium, which were repaired surgically. His liver and spleen injuries were also treated, and the patient was discharged 44 days after admission. The detection of a small pericardial effusion on enhanced computed tomography enabled rapid diagnosis of a cardiac perforation and ensured emergency surgical repair could be performed as soon as possible., Learning Objectives: •To acknowledge the difficulty of diagnosing cardiac perforation in patients with pericardial injury, based on conventional signs of blunt cardiac injury, such as sternal fracture, serum cardiac enzymes, and hemothorax.•To recognize that a small pericardial effusion on enhanced computed tomography scans is an important finding that should raise suspicion of cardiac perforation and pericardial injury., Competing Interests: None., (© 2021 The Authors.)
- Published
- 2021
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24. Venopulmonary artery extracorporeal lung assist in repair of traumatic aortic injury via left thoracotomy.
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Ito H, Bessho S, Yamamoto N, Hirano K, Shomura Y, and Takao M
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- Adult, Aorta, Thoracic diagnostic imaging, Aorta, Thoracic surgery, Catheterization, Humans, Lung, Male, Thoracotomy, Aortic Aneurysm, Thoracic surgery, Aortic Diseases
- Abstract
An urgent surgery was performed for a 28-year-old man who sustained a traumatic descending thoracic aortic injury in an automobile collision. Severe respiratory failure was encountered during surgery, which did not allow for single-lung ventilation for adequate exposure of the descending aorta. We used venopulmonary artery extracorporeal lung assist by main pulmonary artery cannulation with concurrent distal aortic perfusion using a single centrifugal pump. Cannulating the easily accessible main pulmonary artery for venopulmonary artery extracorporeal lung assist is a safe and feasible technique in patients complicated with profound respiratory failure undergoing aortic surgery via left thoracotomy., (© 2020 Wiley Periodicals LLC.)
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- 2020
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25. Understanding Vascular Anatomy is Key to Successful Endovascular Treatment of Pancreaticoduodenal Artery Aneurysms.
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Hirano K, Tokui T, Nakamura B, Inoue R, Hirano R, Maze Y, Chino S, Ito H, Shomura Y, and Takao M
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Pancreaticoduodenal artery aneurysm (PDAA) is a rare disease without treatment guidelines. We present two patients with PDAA. The first patient was a 70-year-old man with a pseudoaneurysm in the anterior superior pancreaticoduodenal artery (ASPDA), for which we achieved exclusion by endovascular coil embolization. The second patient was a 63-year-old woman with a PDAA in the ASPDA with celiac axis obstruction. Endovascular coil embolization of the aneurysm and the ASPDA was successful without visceral organ ischemia. Endovascular treatment is effective for PDAAs, but careful evaluation of collateral circulation is vital in PDAAs with celiac axis obstruction., Competing Interests: Disclosure StatementAll authors have no conflict of interest., (© 2020 The Editorial Committee of Annals of Vascular Diseases.)
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- 2020
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26. Mitral valve repair for infective endocarditis: Kobe experience.
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Okada Y, Nakai T, Muro T, Ito H, and Shomura Y
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- Adult, Aged, Endocarditis diagnostic imaging, Endocarditis physiopathology, Female, Heart Valve Diseases diagnostic imaging, Heart Valve Diseases physiopathology, Heart Valve Prosthesis, Hemodynamics, Humans, Japan, Male, Middle Aged, Mitral Valve diagnostic imaging, Mitral Valve physiopathology, Postoperative Complications surgery, Recovery of Function, Reoperation, Retrospective Studies, Risk Factors, Time Factors, Treatment Outcome, Endocarditis surgery, Heart Valve Diseases surgery, Heart Valve Prosthesis Implantation adverse effects, Heart Valve Prosthesis Implantation instrumentation, Mitral Valve surgery, Mitral Valve Annuloplasty adverse effects, Mitral Valve Annuloplasty instrumentation, Pericardium transplantation
- Abstract
Objectives: We retrospectively analyzed our experience of mitral valve repair for native mitral valve endocarditis in a single institution., Methods: From January 1991 to October 2011, 171 consecutive patients underwent surgery for infective endocarditis. Of these, 147 (86%) had mitral valve repair. At the time of surgery, 98 patients had healed (group A) and 49 had active infective endocarditis (group B). Repair procedures included resection of all infected tissue and thick restricted post-infection tissue, leaflet and annulus reconstruction with treated autologous pericardium, chordal reconstruction with polytetrafluoroethylene sutures, and ring annuloplasty if necessary. Fifty-two (35%) patients required concomitant procedures. The study endpoints were overall survival, freedom from reoperation, and freedom from valve-related events. The median follow-up was 78 months., Results: There was one hospital death (hospital mortality 0.7%). Survival at 10 years was 88.5% ± 3.5% with no significant difference between the two groups ( p = 0.052). Early reoperation was required in 4 patients in group B due to persistent infection or procedure failure. Freedom from reoperation at 5 years was 99% ± 1.0% in group A and 89.6 ± 4.0% in group B ( p = 0.024). Event-free survival at 10 years was 79.3% ± 4.8% (group A: 83.4% ± 5.9%, group B: 72.6% ± 6.9%, p = 0.010)., Conclusions: Mitral valve repair was highly successful using autologous pericardium, chordal reconstruction, and ring annuloplasty if required. Long-term results were acceptable in terms survival, freedom from reoperation, and event-free survival. Mitral valve repair is recommended for mitral infective endocarditis in most patients.
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- 2020
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27. Aortic valve opening and closure: the clover dynamics.
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Lansac E, Lim HS, Shomura Y, Lim KH, Rice NT, Di Centa I, Youssefi P, Goetz W, and Duran CMG
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Background: Systolic aortic root expansion is reported to facilitate valve opening, but the precise dynamics remain unknown. A sonometric study with a high data sampling rate (200 to 800 Hz) was conducted in an acute ovine model to better understand the timing, mechanisms, and shape of aortic valve opening and closure., Methods: Eighteen piezoelectric crystals were implanted in 8 sheep at each annular base, commissures, sinus of Valsalva, sinotubular junction, nodulus of Arantius, and ascending aorta (AA). Geometric changes were time related to pressures and flows., Results: The aortic root was hemodynamically divided into left ventricular (LV) and aortic compartments situated, respectively, below and above the leaflets. During isovolumetric contraction (IVC), aortic root expansion started in the LV compartment, most likely due to volume redistribution in the LV outflow tract below the leaflets. This expansion initiated leaflet separation prior to ejection (2.1%±0.5% of total opening area). Aortic compartment expansion was delayed toward the end of IVC, likely related to volume redistribution above the leaflets due to accelerating aortic backflow toward the aortic valve and coronary flow reduction due to myocardial contraction. Maximum valve opening during the first third of ejection acquired a truncated cone shape [leaflet free edge area smaller than annular base area (-41.5%±5.5%)]. The distal orifice became clover shaped because the leaflet free edge area is larger than the commissural area by 16.3%±2.0%., Conclusions: Aortic valve opening is initiated prior to ejection related to delicate balance between LV, aortic root, and coronary dynamics. It is clover shaped at maximum opening in systole. A better understanding of these mechanisms should stimulate more physiological surgical approaches of valve repair and replacement., Competing Interests: Conflicts of Interest: The authors have no conflicts of interest to declare.
- Published
- 2019
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28. Cardiac tamponade due to rupture of a giant coronary artery aneurysm with a coronary arteriovenous fistula: a case report.
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Shomura Y, Mizumoto T, Fujinaga K, Sawada Y, Ito H, and Teranishi S
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Background: Coronary artery aneurysm (CAA) is defined as dilatation exceeding 1.5 times the width of the normal adjacent coronary artery segments. CAA usually causes few symptoms, and rupture is rare, but can be lethal due to cardiac tamponade when it does occur., Case Presentation: A 79-year-old woman presented with presyncope and back pain. Emergency surgery was performed based on a diagnosis of cardiac tamponade due to either rupture of coronary arteriovenous fistula or CAA. At surgery, a rupture site was located on the wall of the giant CAA, with a diameter of 55 mm, originating from the ostium of the right coronary artery. Suture closure of the inflow and outflow of the aneurysm was performed, and the aneurysmal cavity was obliterated by multiple sutures. The patient made an uneventful recovery and was discharged from hospital on postoperative day 13., Conclusion: On the basis of this case, we propose considering rupture of a CAA as one of the causes of cardiac tamponade.
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- 2019
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29. Redox-dependent conformational changes of a proximal [4Fe-4S] cluster in Hyb-type [NiFe]-hydrogenase to protect the active site from O 2 .
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Noor NDM, Matsuura H, Nishikawa K, Tai H, Hirota S, Kim J, Kang J, Tateno M, Yoon KS, Ogo S, Kubota S, Shomura Y, and Higuchi Y
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- Catalytic Domain, Electron Spin Resonance Spectroscopy, Hydrogen Bonding, Models, Molecular, Oxidation-Reduction, Protein Conformation, Spectroscopy, Fourier Transform Infrared, Hydrogenase chemistry, Iron-Sulfur Proteins chemistry, Oxygen chemistry
- Abstract
Citrobacter sp. S-77 [NiFe]-hydrogenase harbors a standard [4Fe-4S] cluster proximal to the Ni-Fe active site. The presence of relocatable water molecules and a flexible aspartate enables the [4Fe-4S] to display redox-dependent conformational changes. These structural features are proposed to be the key aspects that protect the active site from O2 attack.
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- 2018
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30. Complete Genome Sequence of a Moderately Thermophilic Facultative Chemolithoautotrophic Hydrogen-Oxidizing Bacterium, Hydrogenophilus thermoluteolus TH-1.
- Author
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Arai H, Shomura Y, Higuchi Y, and Ishii M
- Abstract
Hydrogenophilus spp., which are moderately thermophilic aerobic betaproteobacteria, are widely distributed in geothermal environments. They fix carbon dioxide via the Calvin-Benson-Bassham cycle and exhibit rapid autotrophic growth using hydrogen as an energy source. Here, we report the complete genome sequence of Hydrogenophilus thermoluteolus strain TH-1.
- Published
- 2018
- Full Text
- View/download PDF
31. Double Inferior Vena Cava with Azygos Continuation and Retroaortic Left Renal Vein Associated with Juxtarenal Abdominal Aortic Aneurysm Surgery.
- Author
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Onoda K, Shomura Y, and Komada T
- Abstract
The combination of a double inferior vena cava (IVC), a retroaortic left renal vein, and azygos continuation of the IVC is extremely rare. Here we report the case of a 74-year-old man with this complex venous anomaly associated with a juxtarenal abdominal aortic aneurysm (AAA), who underwent a successful graft implantation with left renal artery reconstruction without injuring the retroaortic venous system. The venous anomaly was diagnosed using preoperative contrast-enhanced computed tomography (CT). Thus, contrast-enhanced CT can provide sufficient information on AAA and anomalous venous anatomy to avoid fatal complications during AAA surgery.
- Published
- 2018
- Full Text
- View/download PDF
32. Rational Design of Domain-Swapping-Based c-Type Cytochrome Heterodimers by Using Chimeric Proteins.
- Author
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Zhang M, Nakanishi T, Yamanaka M, Nagao S, Yanagisawa S, Shomura Y, Shibata N, Ogura T, Higuchi Y, and Hirota S
- Subjects
- Aquifoliaceae enzymology, Circular Dichroism, Crystallography, X-Ray, Cytochrome c Group chemistry, Cytochrome c Group genetics, Dimerization, Heme chemistry, Heme metabolism, Oxygen chemistry, Protein Engineering, Protein Structure, Tertiary, Pseudomonas aeruginosa enzymology, Recombinant Fusion Proteins biosynthesis, Recombinant Fusion Proteins chemistry, Recombinant Fusion Proteins isolation & purification, Spectrum Analysis, Raman, Cytochrome c Group metabolism
- Abstract
The design of protein oligomers with multiple active sites has been gaining interest, owing to their potential use for biomaterials, which has encouraged researchers to develop a new design method. Three-dimensional domain swapping is the unique phenomenon in which protein molecules exchange the same structural region between each other. Herein, to construct oligomeric heme proteins with different active sites by utilizing domain swapping, two c-type cytochrome-based chimeric proteins have been constructed and the domains swapped. According to X-ray crystallographic analysis, the two chimeric proteins formed a domain-swapped dimer with two His/Met coordinated hemes. By mutating the heme coordination structure of one of the two chimeric proteins, a domainswapped heterodimer with His/Met and His/H
2 O coordinated hemes was formed. Binding of an oxygen molecule to the His/H2 O site of the heterodimer was confirmed by resonance Raman spectroscopy, in which the Fe-O2 stretching band was observed at 580 cm-1 for the reduced/oxygenated heterodimer (at 554 cm-1 under an18 O2 atmosphere). These results show that domain swapping is a useful method to design multiheme proteins., (© 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.)- Published
- 2017
- Full Text
- View/download PDF
33. The impact of global left ventricular afterload on left ventricular reverse remodeling after aortic valve replacement.
- Author
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Ito H, Mizumoto T, Shomura Y, Sawada Y, Kajiyama K, and Shimpo H
- Subjects
- Aged, Aged, 80 and over, Aortic Valve Stenosis diagnosis, Echocardiography, Female, Humans, Male, Postoperative Period, Aortic Valve surgery, Aortic Valve Stenosis physiopathology, Aortic Valve Stenosis surgery, Heart Valve Prosthesis Implantation methods, Heart Ventricles physiopathology, Ventricular Function, Left, Ventricular Remodeling physiology
- Abstract
Background: Conventional indices such as prosthetic valve effective orifice area (EOA) or transvalvular pressure gradients (TPG) may be unreliable in predicting left ventricular (LV) reverse remodeling after aortic valve replacement (AVR). We hypothesized that the global LV afterload, including valvular and arterial impedance, could influence LV reverse remodeling after AVR., Methods: Twenty-three consecutive aortic-stenosis patients (mean age, 76 ± 6.4 years) underwent isolated AVR using contemporary externally wrapped pericardial valves (19 mm, 10 patients; 21 mm 11; 23 mm, 2). Valvuloarterial impedance (Zva), a marker of global LV afterload, was measured on serial echocardiography in addition to indexed EOA, energy loss index (ELI), mean TPG, and stroke work loss. LV mass regression was used as a parameter of LV reverse remodeling., Results: The Zva significantly decreased after AVR (5.05 ± 1.7 mmHg/mL/m
2 , pre-operatively; 3.12 ± 1.0, postoperatively; 3.13 ± 0.89, at last follow-up) in parallel with increased indexed EOA (0.46 ± 0.13 cm2 /m2 ; 1.13 ± 0.24; 0.96 ± 0.19), ELI (0.55 ± 0.21 cm2 /m2 ; 1.74 ± 0.52; 1.47 ± 0.42), and decreased mean TPG (50.2 ± 19.6 mmHg; 11.1 ± 5.4; 14.7 ± 5.8). The stroke work loss also decreased (26.3 ± 8.5 %; 8.65 ± 4.0; 9.36 ± 3.4). The Zva at last follow-up was significantly correlated with LV mass regression (correlation coefficient, r = - 0.48; P = 0.002), and was a significant predictor of LV reverse remodeling on multiple regression analysis (adjusted odds ratio, -0.43; 95% confidence interval, -31.3 to -0.67, P = 0.042), while indexed EOA, ELI, mean TPG, or systemic arterial compliance were not., Conclusions: The postoperative Zva was significantly associated with LV mass regression after AVR. Maintaining low global LV afterload following AVR may enhance LV reverse remodeling., (© 2017 Wiley Periodicals, Inc.)- Published
- 2017
- Full Text
- View/download PDF
34. Efficacy and safety of thoracoscopic pericardial window in patients with pericardial effusions: a single-center case series.
- Author
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Sakanoue I, Hamakawa H, Okubo Y, Minami K, Miyamoto E, Shomura Y, and Takahashi Y
- Subjects
- Adult, Aged, Aged, 80 and over, Echocardiography, Female, Humans, Japan, Male, Middle Aged, Operative Time, Pericardial Effusion diagnostic imaging, Pericardial Effusion mortality, Postoperative Complications, Radiography, Thoracic, Recurrence, Retrospective Studies, Treatment Outcome, Pericardial Effusion surgery, Pericardial Window Techniques
- Abstract
Background: Pericardial effusion (PE) is a common finding in patients who had chronic cardiac failure, who had undergone cardiac surgery, or who had certain other benign and malignant diseases. PE ranges in severity from mild, asymptomatic effusions to cardiac tamponade. Although a thoracoscopic pericardial window (TPW) is a minimally invasive surgical option for patients with PE, there are few published data regarding the outcomes of TPW for PE. We investigated the contribution of the TPW to the treatment of PEs that are recurrent or difficult to drain percutaneously., Methods: We conducted a retrospective chart review of the indications for TPW that included data on preoperative, intraoperative, and postoperative variables; morbidity; recurrence; and survival. Fourteen consecutive patients with PE that was recurrent or difficult to drain percutaneously and who underwent treatment with a TPW were enrolled in this study. Trocars for passage of the thoracoscope and surgical instruments were introduced through two or three incisions. Mini-thoracotomy was also performed in patients with hemopericardium and loculated fibrinous effusions. All patients were evaluated by face-to-face interviews, transthoracic echocardiography (TTE), and chest radiography 3-6 months after the TPW was obtained., Results: The mean age of the patients was 70 years (range 28-83 years). The operative time was 72.1 ± 29.5 min. Six patients had undergone open heart surgery during the month prior to their presentation with PE. No intraoperative or postoperative complications occurred, although PE had recurred in one patient. Two patients died of malignant disease several months after the TPW. The cardiothoracic ratio (determined on chest radiographs) and the ejection fraction ratio (determined using TTE) had improved at the 3- and 6-month follow-up evaluations (p < 0.0001 and p = 0.012, respectively). Some patients could discontinue diuretics after the procedure, as assessed by the cardiologist based on symptom alleviation, chest radiography, and TTE findings., Conclusions: For patients with PEs that are recurrent or difficult to drain percutaneously, TPW is an effective, safe surgical approach in terms of cardiac function and radiological findings.
- Published
- 2016
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- View/download PDF
35. [Pulmonary Arterioplasty with Autologous Pericardial Patch for Lung Cancer].
- Author
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Shomura Y, Fujinaga K, Takahashi Y, Hamakawa H, Fujii K, Teranishi S, Itoh H, Sawada Y, and Mizumoto T
- Subjects
- Aged, Autografts, Follow-Up Studies, Humans, Male, Vascular Patency, Lung Neoplasms surgery, Pericardium transplantation, Pulmonary Artery surgery
- Abstract
Three patients underwent left upper lobectomy with arterioplasty of left pulmonary artery trunk for lung cancer. For pulmonary arterioplasty, wide wedge resection and patch plasty with autologous pericardium was performed. No in-hospital death or no postoperative complications due to arterioplasty was encountered. The mean follow-up period was 3.6 years and long-term patency of the reconstructed pulmonary artery was confirmed by computed tomography in all patients.
- Published
- 2015
36. Domain-swapped cytochrome cb 562 dimer and its nanocage encapsulating a Zn-SO 4 cluster in the internal cavity.
- Author
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Miyamoto T, Kuribayashi M, Nagao S, Shomura Y, Higuchi Y, and Hirota S
- Abstract
Protein nanostructures have been gaining in interest, along with developments in new methods for construction of novel nanostructures. We have previously shown that c -type cytochromes and myoglobin form oligomers by domain swapping. Herein, we show that a four-helix bundle protein cyt cb
562 , with the cyt b562 heme attached to the protein moiety by two Cys residues insertion, forms a domain-swapped dimer. Dimeric cyt cb562 did not dissociate to monomers at 4 °C, whereas dimeric cyt b562 dissociated under the same conditions, showing that heme attachment to the protein moiety stabilizes the domain-swapped structure. According to X-ray crystallographic analysis of dimeric cyt cb562 , the two helices in the N-terminal region of one protomer interacted with the other two helices in the C-terminal region of the other protomer, where Lys51-Asp54 served as a hinge loop. The heme coordination structure of the dimer was similar to that of the monomer. In the crystal, three domain-swapped cyt cb562 dimers formed a unique cage structure with a Zn-SO4 cluster inside the cavity. The Zn-SO4 cluster consisted of fifteen Zn2+ and seven SO4 2- ions, whereas six additional Zn2+ ions were detected inside the cavity. The cage structure was stabilized by coordination of the amino acid side chains of the dimers to the Zn2+ ions and connection of two four-helix bundle units through the conformation-adjustable hinge loop. These results show that domain swapping can be applied in the construction of unique protein nanostructures.- Published
- 2015
- Full Text
- View/download PDF
37. Oligomerization enhancement and two domain swapping mode detection for thermostable cytochrome c552 via the elongation of the major hinge loop.
- Author
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Ren C, Nagao S, Yamanaka M, Komori H, Shomura Y, Higuchi Y, and Hirota S
- Subjects
- Binding Sites, Catalytic Domain, Cytochrome c Group genetics, Cytochrome c Group metabolism, Protein Array Analysis, Protein Conformation, Cytochrome c Group chemistry, Models, Molecular, Protein Interaction Domains and Motifs, Protein Multimerization, Thermodynamics
- Abstract
High-order oligomers of Hydrogenobacter thermophilus cytochrome c552 increased with the insertion of more Gly residues between Ala18 and Lys19 at the major hinge loop of the wild-type protein. N-Terminal domain swapping and C-terminal domain swapping were elucidated by using X-ray crystallography for the mutant with the insertion of three Gly residues at the hinge loop.
- Published
- 2015
- Full Text
- View/download PDF
38. Refined regio- and stereoselective hydroxylation of L-pipecolic acid by protein engineering of L-proline cis-4-hydroxylase based on the X-ray crystal structure.
- Author
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Koketsu K, Shomura Y, Moriwaki K, Hayashi M, Mitsuhashi S, Hara R, Kino K, and Higuchi Y
- Subjects
- Crystallography, X-Ray, Hydroxylation, Protein Structure, Tertiary, Bacterial Proteins chemistry, Bacterial Proteins metabolism, Mesorhizobium enzymology, Pipecolic Acids chemistry, Pipecolic Acids metabolism, Prolyl Hydroxylases chemistry, Prolyl Hydroxylases metabolism, Sinorhizobium meliloti enzymology
- Abstract
Enzymatic regio- and stereoselective hydroxylation are valuable for the production of hydroxylated chiral ingredients. Proline hydroxylases are representative members of the nonheme Fe(2+)/α-ketoglutarate-dependent dioxygenase family. These enzymes catalyze the conversion of L-proline into hydroxy-L-prolines (Hyps). L-Proline cis-4-hydroxylases (cis-P4Hs) from Sinorhizobium meliloti and Mesorhizobium loti catalyze the hydroxylation of L-proline, generating cis-4-hydroxy-L-proline, as well as the hydroxylation of L-pipecolic acid (L-Pip), generating two regioisomers, cis-5-Hypip and cis-3-Hypip. To selectively produce cis-5-Hypip without simultaneous production of two isomers, protein engineering of cis-P4Hs is required. We therefore carried out protein engineering of cis-P4H to facilitate the conversion of the majority of L-Pip into the cis-5-Hypip isomer. We first solved the X-ray crystal structure of cis-P4H in complex with each of L-Pro and L-Pip. Then, we conducted three rounds of directed evolution and successfully created a cis-P4H triple mutant, V97F/V95W/E114G, demonstrating the desired regioselectivity toward cis-5-Hypip.
- Published
- 2015
- Full Text
- View/download PDF
39. Rational design of heterodimeric protein using domain swapping for myoglobin.
- Author
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Lin YW, Nagao S, Zhang M, Shomura Y, Higuchi Y, and Hirota S
- Subjects
- Dimerization, Myoglobin chemistry
- Abstract
Protein design is a useful method to create novel artificial proteins. A rational approach to design a heterodimeric protein using domain swapping for horse myoglobin (Mb) was developed. As confirmed by X-ray crystallographic analysis, a heterodimeric Mb with two different active sites was produced efficiently from two surface mutants of Mb, in which the charges of two amino acids involved in the dimer salt bridges were reversed in each mutant individually, with the active site of one mutant modified. This study shows that the method of constructing heterodimeric Mb with domain swapping is useful for designing artificial multiheme proteins., (© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2015
- Full Text
- View/download PDF
40. Trans-Septal Approach for Hypertrophic Obstructive Cardiomyopathy.
- Author
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Konishi Y, Shomura Y, Fukunaga N, Koyama T, and Okada Y
- Subjects
- Cardiomyopathy, Hypertrophic complications, Cardiomyopathy, Hypertrophic diagnosis, Cardiomyopathy, Hypertrophic physiopathology, Heart Septum pathology, Heart Septum physiopathology, Humans, Male, Middle Aged, Mitral Valve Insufficiency etiology, Mitral Valve Insufficiency surgery, Papillary Muscles surgery, Recurrence, Syncope diagnosis, Syncope etiology, Treatment Outcome, Ventricular Outflow Obstruction etiology, Ventricular Outflow Obstruction surgery, Cardiac Surgical Procedures, Cardiomyopathy, Hypertrophic surgery, Heart Septum surgery
- Abstract
Transaortic septal myectomy, known as Morrow's procedure, is a standard treatment for hypertrophic obstructive cardiomyopathy (HOCM). The case is described of a 58-year-old male patient who suffered a repetition of syncope due to HOCM, in whom septal myectomy was performed. As resection of the hypertrophied septum using Morrow's procedure was considered insufficient by palpation to release mitral regurgitation (MR) and systolic anterior motion of the mitral valve, the surgical approach was changed such that the right ventricular outflow tract and ventricular septum was incised. The residual hypertrophied septum was successfully resected to the base of the anterior papillary muscle under direct vision. Postoperative echocardiography demonstrated a dramatic improvement in the MR and left ventricular outflow tract obstruction. The patient's postoperative course was good, with cibenzoline and calcium channel blocker therapy stopped and beta-blocker therapy reduced after surgery. If resection of the hypertrophied septum using Morrow's procedure is considered insufficient, a trans-septal approach represents an adequate option to treat HOCM.
- Published
- 2015
41. Crystallization and preliminary X-ray analysis of the NAD+-reducing [NiFe] hydrogenase from Hydrogenophilus thermoluteolus TH-1.
- Author
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Taketa M, Nakagawa H, Habukawa M, Osuka H, Kihira K, Komori H, Shibata N, Ishii M, Igarashi Y, Nishihara H, Yoon KS, Ogo S, Shomura Y, and Higuchi Y
- Subjects
- Crystallization, Crystallography, X-Ray, Bacterial Proteins chemistry, Hydrogenase chemistry, Hydrogenophilaceae enzymology
- Abstract
NAD+-reducing [NiFe] hydrogenases catalyze the oxidoreduction of dihydrogen concomitant with the interconversion of NAD+ and NADH. Here, the isolation, purification and crystallization of the NAD+-reducing [NiFe] hydrogenase from Hydrogenophilus thermoluteolus TH-1 are reported. Crystals of the NAD+-reducing [NiFe] hydrogenase were obtained within one week from a solution containing polyethylene glycol using the sitting-drop vapour-diffusion method and micro-seeding. The crystal diffracted to 2.58 Å resolution and belonged to space group C2, with unit-cell parameters a=131.43, b=189.71, c=124.59 Å, β=109.42°. Assuming the presence of two NAD+-reducing [NiFe] hydrogenase molecules in the asymmetric unit, VM was calculated to be 2.2 Å3 Da(-1), which corresponds to a solvent content of 43%. Initial phases were determined by the single-wavelength anomalous dispersion method using the anomalous signal from the Fe atoms.
- Published
- 2015
- Full Text
- View/download PDF
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