104 results on '"Ralf Tonner"'
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2. Chemical bonding of HF, HCl, and H 2 O onto YF 3 surfaces: Quantification by first principles.
- Author
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Jennifer Anders, Henrik Wiedenhaupt, Florian Kreuter, Ralf Tonner-Zech, and Beate Paulus
- Published
- 2023
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3. Bonding character of intermediates in on-surface Ullmann reactions revealed with energy decomposition analysis.
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Jan-Niclas Luy, Pascal Henkel, Daniel Grigjanis, Jannis Jung, Doreen Mollenhauer, and Ralf Tonner-Zech
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- 2023
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4. Efficient hierarchical models for reactivity of organic layers on semiconductor surfaces.
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Jan-Niclas Luy, Mahlet Molla, Lisa Pecher, and Ralf Tonner
- Published
- 2021
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5. Complementary Base Lowers the Barrier in SuFEx Click Chemistry for Primary Amine Nucleophiles
- Author
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Jan-Niclas Luy and Ralf Tonner
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Chemistry ,QD1-999 - Published
- 2020
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6. Template-controlled on-surface synthesis of a lanthanide supernaphthalocyanine and its open-chain polycyanine counterpart
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Qitang Fan, Jan-Niclas Luy, Martin Liebold, Katharina Greulich, Malte Zugermeier, Jörg Sundermeyer, Ralf Tonner, and J. Michael Gottfried
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Science - Abstract
Extending the π‐conjugation of phthalocyanine dyes, while synthetically challenging, has the potential to produce desirable new molecular materials. Here, the authors use a templated on‐surface approach to synthesize several extended phthalocyanine derivatives from the same building block, including a lanthanide superphthalocyanine and an open‐chain polycyanine.
- Published
- 2019
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7. Dispersion-mediated steering of organic adsorbates on a precovered silicon surface
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Lisa Pecher, Sebastian Schmidt, and Ralf Tonner
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bonding analysis ,cyclooctyne ,density functional theory ,dispersion ,organic/inorganic interfaces ,Science ,Organic chemistry ,QD241-441 - Abstract
The chemistry of organic adsorbates on surfaces is often discussed in terms of Pauli repulsion as limiting factor regarding the packing of molecules. Here we show that the attractive part of the van der Waals potential can be similarly decisive. For the semiconductor surface Si(001), an already covalently bonded molecule of cyclooctyne steers a second incoming molecule via dispersion interactions onto the neighbouring adsorption site. This helps in understanding the nonstatistical pattern formation for this surface–adsorbate system and hints toward an inclusion of dispersion attraction as another determining factor for surface adsorption.
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- 2018
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8. Comparison of the periodic slab approach with the finite cluster description of metal-organic interfaces at the example of PTCDA on Ag(110).
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Jaita Banerjee, Stefan Behnle, Martin C. E. Galbraith, Volker Settels, Bernd Engels, Ralf Tonner, and Reinhold F. Fink
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- 2018
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9. Alkyne-Functionalized Cyclooctyne on Si(001): Reactivity Studies and Surface Bonding from an Energy Decomposition Analysis Perspective
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Fabian Pieck and Ralf Tonner-Zech
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density functional theory ,pEDA ,organic functionalization ,silicon surface ,nudged elastic band ,ab initio molecular dynamics ,Organic chemistry ,QD241-441 - Abstract
The reactivity and bonding of an ethinyl-functionalized cyclooctyne on Si(001) is studied by means of density functional theory. This system is promising for the organic functionalization of semiconductors. Singly bonded adsorption structures are obtained by [2 + 2] cycloaddition reactions of the cyclooctyne or ethinyl group with the Si(001) surface. A thermodynamic preference for adsorption with the cyclooctyne group in the on-top position is found and traced back to minimal structural deformation of the adsorbate and surface with the help of energy decomposition analysis for extended systems (pEDA). Starting from singly bonded structures, a plethora of reaction paths describing conformer changes and consecutive reactions with the surface are discussed. Strongly exothermic and exergonic reactions to doubly bonded structures are presented, while small reaction barriers highlight the high reactivity of the studied organic molecule on the Si(001) surface. Dynamic aspects of the competitive bonding of the functional groups are addressed by ab initio molecular dynamics calculations. Several trajectories for the doubly bonded structures are obtained in agreement with calculations using the nudged elastic band approach. However, our findings disagree with the experimental observations of selective adsorption by the cyclooctyne moiety, which is critically discussed.
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- 2021
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10. Synthesis of a rhodium(<scp>iii</scp>) dinitrogen complex using a calix[4]arene-based diphosphine ligand
- Author
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Jack Emerson-King, Sudip Pan, Matthew R. Gyton, Ralf Tonner-Zech, and Adrian B. Chaplin
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Materials Chemistry ,Metals and Alloys ,Ceramics and Composites ,General Chemistry ,Catalysis ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials - Abstract
Capturing dinitrogen at a high-valent metal centre using a cavitand-based ligand.
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- 2023
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11. Topological Stone–Wales Defects Enhance Bonding and Electronic Coupling at the Graphene/Metal Interface
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Benedikt P. Klein, Alexander Ihle, Stefan R. Kachel, Lukas Ruppenthal, Samuel J. Hall, Lars Sattler, Sebastian M. Weber, Jan Herritsch, Andrea Jaegermann, Daniel Ebeling, Reinhard J. Maurer, Gerhard Hilt, Ralf Tonner-Zech, André Schirmeisen, and J. Michael Gottfried
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General Engineering ,General Physics and Astronomy ,General Materials Science - Abstract
Defects play a critical role for the functionality and performance of materials, but the understanding of the related effects is often lacking, because the typically low concentrations of defects make them difficult to study. A prominent case is the topological defects in two-dimensional materials such as graphene. The performance of graphene-based (opto-)electronic devices depends critically on the properties of the graphene/metal interfaces at the contacting electrodes. The question of how these interface properties depend on the ubiquitous topological defects in graphene is of high practical relevance, but could not be answered so far. Here, we focus on the prototypical Stone–Wales (S–W) topological defect and combine theoretical analysis with experimental investigations of molecular model systems. We show that the embedded defects undergo enhanced bonding and electron transfer with a copper surface, compared to regular graphene. These findings are experimentally corroborated using molecular models, where azupyrene mimics the S–W defect, while its isomer pyrene represents the ideal graphene structure. Experimental interaction energies, electronic-structure analysis, and adsorption distance differences confirm the defect-controlled bonding quantitatively. Our study reveals the important role of defects for the electronic coupling at graphene/metal interfaces and suggests that topological defect engineering can be used for performance control.\ud \ud
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- 2022
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12. Elucidating the Reaction Mechanism of Atomic Layer Deposition of Al2O3 with a Series of Al(CH3)xCl3–x and Al(CyH2y+1)3 Precursors
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Il-Kwon Oh, Tania E. Sandoval, Tzu-Ling Liu, Nathaniel E. Richey, Chi Thang Nguyen, Bonwook Gu, Han-Bo-Ram Lee, Ralf Tonner-Zech, and Stacey F. Bent
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Colloid and Surface Chemistry ,General Chemistry ,Biochemistry ,Catalysis - Published
- 2022
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13. Tuning Molecular Inhibitors and Aluminum Precursors for the Area-Selective Atomic Layer Deposition of Al2O3
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Josiah Yarbrough, Fabian Pieck, Daniel Grigjanis, Il-Kwon Oh, Patrick Maue, Ralf Tonner-Zech, and Stacey F. Bent
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General Chemical Engineering ,Materials Chemistry ,General Chemistry - Published
- 2022
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14. From small fullerenes to the graphene limit: A harmonic force-field method for fullerenes and a comparison to density functional calculations for Goldberg-Coxeter fullerenes up to C980.
- Author
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Lukas N. Wirz, Ralf Tonner, Andreas Hermann 0004, Rebecca Sure, and Peter Schwerdtfeger
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- 2016
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15. [SMe3]2[Bi2Ag2I10], a silver iodido bismuthate with an unusually small band gap
- Author
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Jakob Möbs, Sudip Pan, Ralf Tonner-Zech, and Johanna Heine
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Inorganic Chemistry - Abstract
The synthesis and characterization of a new silver iodido bismuthate with a low optical band gap highlights the decisive role of building unit connectivity for the optical properties in this class of materials.
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- 2022
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16. Reactivity of organic molecules on semiconductor surfaces revealed by density functional theory
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Fabian Pieck, Jan-Niclas Luy, Florian Kreuter, Badal Mondal, and Ralf Tonner-Zech
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- 2023
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17. Relevance of π‐Backbonding for the Reactivity of Electrophilic Anions [B 12 X 11 ] − (X=F, Cl, Br, I, CN)
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Ralf Tonner, Carsten Jenne, Sebastian Kawa, Martin Mayer, Knut R. Asmis, Harald Knorke, Jonas Warneke, Francine Horn, and Markus Rohdenburg
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Steric effects ,Valence (chemistry) ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,Infrared spectroscopy ,General Chemistry ,Electron deficiency ,010402 general chemistry ,01 natural sciences ,Catalysis ,0104 chemical sciences ,Delocalized electron ,Partial charge ,Crystallography ,Reactivity (chemistry) ,Pi backbonding - Abstract
Electrophilic anions of type [B12 X11 ]- posses a vacant positive boron binding site within the anion. In a comparatitve experimental and theoretical study, the reactivity of [B12 X11 ]- with X=F, Cl, Br, I, CN is characterized towards different nucleophiles: (i) noble gases (NGs) as σ-donors and (ii) CO/N2 as σ-donor-π-acceptors. Temperature-dependent formation of [B12 X11 NG]- indicates the enthalpy order (X=CN)>(X=Cl)≈(X=Br)>(X=I)≈(X=F) almost independent of the NG in good agreement with calculated trends. The observed order is explained by an interplay of the electron deficiency of the vacant boron site in [B12 X11 ]- and steric effects. The binding of CO and N2 to [B12 X11 ]- is significantly stronger. The B3LYP 0 K attachment enthapies follow the order (X=F)>(X=CN)>(X=Cl)>(X=Br)>(X=I), in contrast to the NG series. The bonding motifs of [B12 X11 CO]- and [B12 X11 N2 ]- were characterized using cryogenic ion trap vibrational spectroscopy by focusing on the CO and N2 stretching frequencies νCO and νN2 , respectively. Observed shifts of νCO and νN2 are explained by an interplay between electrostatic effects (blue shift), due to the positive partial charge, and by π-backdonation (red shift). Energy decomposition analysis and analysis of natural orbitals for chemical valence support all conclusions based on the experimental results. This establishes a rational understanding of [B12 X11 ]- reactivety dependent on the substituent X and provides first systematic data on π-backdonation from delocalized σ-electron systems of closo-borate anions.
- Published
- 2021
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18. Click Chemistry in Ultra‐high Vacuum – Tetrazine Coupling with Methyl Enol Ether Covalently Linked to Si(001)
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Ralf Tonner, Michael Dürr, Lukas Freund, Christian Länger, Jan-Niclas Luy, Timo Glaser, Jannick Meinecke, and Ulrich Koert
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X-ray photoelectron spectroscopy ,Ultra-high vacuum ,surface chemistry ,010402 general chemistry ,01 natural sciences ,Catalysis ,Tetrazine ,chemistry.chemical_compound ,Polymer chemistry ,Molecule ,chemistry.chemical_classification ,010405 organic chemistry ,Communication ,Organic Chemistry ,silicon ,General Chemistry ,Triple bond ,Communications ,0104 chemical sciences ,chemistry ,Covalent bond ,click chemistry ,density functional calculations ,Click chemistry ,Enol ether - Abstract
The additive‐free tetrazine/enol ether click reaction was performed in ultra‐high vacuum (UHV) with an enol ether group covalently linked to a silicon surface: Dimethyl 1,2,4,5‐tetrazine‐3,6‐dicarboxylate molecules were coupled to the enol ether group of a functionalized cyclooctyne which was adsorbed on the silicon (001) surface via the strained triple bond of cyclooctyne. The reaction was observed at a substrate temperature of 380 K by means of X‐ray photoelectron spectroscopy (XPS). A moderate energy barrier was deduced for this click reaction in vacuum by means of density functional theory based calculations, in good agreement with the experimental results. This UHV‐compatible click reaction thus opens a new, flexible route for synthesizing covalently bound organic architectures., Catalyst‐free coupling of a tetrazine derivative and an enol ether group, the latter being covalently attached on a Si(001) surface via cyclooctyne, has been observed in ultra‐high vacuum by X‐ray photoelectron spectroscopy. DFT calculations identified the associated reaction meachanism. This click chemistry scheme allows the synthesis of covalently bound molecular architectures on highly reactive surfaces in a UHV environment.
- Published
- 2021
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19. [SMe
- Author
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Jakob, Möbs, Sudip, Pan, Ralf, Tonner-Zech, and Johanna, Heine
- Abstract
Iodido metalates of heavy main group elements have seen much research interest in the last years due to their possible application as absorbers in photovoltaics. However, for materials based on the non-toxic element bismuth one challenge lies in narrowing the optical band gap for sufficient solar absorption. Here, we present a new iodido silver bismuthate, [SMe
- Published
- 2022
20. Organic Functionalization at the Si(001) Dimer Vacancy Defect—Structure, Bonding, and Reactivity
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Jan-Niclas Luy and Ralf Tonner
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Materials science ,Dimer ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Crystallography ,chemistry.chemical_compound ,General Energy ,chemistry ,Vacancy defect ,Surface modification ,Density functional theory ,Reactivity (chemistry) ,Physical and Theoretical Chemistry ,0210 nano-technology - Abstract
In this density functional theory study, the influence of the bonded dimer vacancy (DV) on the reactivity of the Si(001) surface is investigated. To this end, electronic and structural properties o...
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- 2021
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21. Combined XPS and DFT investigation of the adsorption modes of methyl enol ether functionalized cyclooctyne on Si(001)
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Michael Dürr, Jan-Niclas Luy, Timo Glaser, Ulrich Koert, Jannick Meinecke, Christian Länger, and Ralf Tonner
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organic molecules ,X ray photoelectron spectroscopy ,02 engineering and technology ,010402 general chemistry ,01 natural sciences ,Article ,silicon surface ,Adsorption ,X-ray photoelectron spectroscopy ,Polymer chemistry ,Molecule ,Physical and Theoretical Chemistry ,chemoselective adsorption ,Ether cleavage ,chemistry.chemical_classification ,Chemistry ,Substrate (chemistry) ,Articles ,021001 nanoscience & nanotechnology ,Triple bond ,Atomic and Molecular Physics, and Optics ,0104 chemical sciences ,density functional calculations ,Enol ether ,Density functional theory ,0210 nano-technology - Abstract
The reaction of methyl enol ether functionalized cyclooctyne on the silicon (001) surface was investigated by means of X‐ray photoelectron spectroscopy (XPS) and density functional theory (DFT). Three different groups of final states were identified; all of them bind on Si(001) via the strained triple bond of cyclooctyne but they differ in the configuration of the methyl enol ether group. The majority of molecules adsorbs without additional reaction of the enol ether group; the relative contribution of this configuration to the total coverage depends on substrate temperature and coverage. Further configurations include enol ether groups which reacted on the silicon surface either via ether cleavage or enol ether groups which transformed on the surface into a carbonyl group., Binding via strained bond: Methyl enol ether functionalized cylooctyne is shown to adsorb on Si(001) preferentially via the strained triple bond of cyclooctyne. It can thus serve as an interface between the silicon surface and organic architectures which are coupled via the intact enol ether group. Side reactions include ether cleavage and the formation of an aldehyde group as observed by XPS and DFT.
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- 2021
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22. Gemischte Gruppe‐14‐15‐Metallate als Modellverbindungen für dotierte Bleihalogenidperowskite
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Jan-Niclas Luy, Luca Schipplick, Johanna Heine, Natalie Dehnhardt, Philip Klement, Sangam Chatterjee, and Ralf Tonner
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Materials science ,General Medicine - Published
- 2021
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23. Towards self-doping multimetal porphyrin systems
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Ralf Tonner, Manfred T. Reetz, Udo Lehmann, and Richard Goddard
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chemistry.chemical_compound ,Electron transfer ,chemistry ,Tetraphenylporphyrin ,Doping ,General Chemistry ,Photochemistry ,Bimetallic strip ,Porphyrin ,Catalysis - Abstract
An approach for the possible production of novel bimetallic self-doped porphyrin-based compounds of potential interest in material science is reported. Heating Cu(II)tetraphenylporphyrin (TPPCu) with chromocene at 120°C in benzonitrile affords the crystalline multimetal porphyrin system TPPCu/TPPCr in good yield. The X-ray single crystal structural analysis reveals a random distribution of TPPCu and TPPCr, with a Cu:Cr ratio of 71(2):29(2)%. Exploratory DFT calculations of TPPCu/TPPCr indicate little if any electron transfer. In contrast, calculations of a hypothetical cationic TPPCu/TPPRu system indicates the possibility of self-doping.
- Published
- 2021
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24. The influence of copper on the optical band gap of heterometallic iodido antimonates and bismuthates
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Alena Shlyaykher, Johanna Heine, Jan-Niclas Luy, Ralf Tonner, and Jakob Möbs
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Materials science ,Band gap ,Ligand ,business.industry ,chemistry.chemical_element ,Crystal structure ,Copper ,Bismuth ,Inorganic Chemistry ,chemistry ,Antimony ,Main group element ,Photovoltaics ,Physical chemistry ,business - Abstract
Halogenido metalates of heavy main group elements are versatile semiconductor materials with broad applications. Especially the iodido metalates generally show small optical band gaps, making them suitable for photovoltaics. However, the most promising results have been generated using toxic lead-based materials, raising environmental concerns, while the related and far less toxic bismuth compounds show band gaps too large for direct use in photovoltaics. The introduction of heterometals such as copper can significantly lower the band gap of iodido bismuthates and antimonates, but no clear trend could yet be established in this regard. In this work a short overview over all known copper iodido bismuthates and antimonates is given and this small family of compounds is expanded with nine charged as well as neutral complexes [EkMlIm(P(R)3)n]q− (E = Sb, Bi; M = Cu, Ag; R = Ph, o-tol). The compounds’ crystal structures, stability and optical properties are investigated and compared to the findings of quantum chemical investigations. The main excitation is shown to be a copper to antimony or copper to bismuth charge transfer while the relative energetic position of the organic ligand orbitals influences the magnitude of the band gap. This reveals that the nature of the ligands and the coordination environment at the copper atom is crucial for designing new copper iodido antimonates and bismuthates with specific band gaps.
- Published
- 2021
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25. Complementary Base Lowers the Barrier in SuFEx Click Chemistry for Primary Amine Nucleophiles
- Author
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Ralf Tonner and Jan-Niclas Luy
- Subjects
Reaction mechanism ,Primary (chemistry) ,010405 organic chemistry ,Chemistry ,Methylamine ,General Chemical Engineering ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Article ,0104 chemical sciences ,chemistry.chemical_compound ,Nucleophile ,Computational chemistry ,Functional group ,Click chemistry ,Density functional theory ,Fluoride ,QD1-999 - Abstract
The Sulfur (VI) Fluoride Exchange (SuFEx) reaction is an emerging scheme for connecting molecular building blocks. Due to its broad functional group tolerance and rather stable resulting linkage it is seeing rapid adoption in various fields of chemistry. Still, to date the reaction mechanism is poorly understood which hampers further development. Here, we show that the mechanism of the SuFEx reaction for the prototypical example of methanesulfonyl fluoride reacting with methylamine can be understood as an SN2-type reaction. By analyzing the reaction path with the help of density functional theory in vacuo and under consideration of solvent and co-reactant influence we identify the often used complementary base as crucial ingredient to lower the reaction barrier significantly by increasing the nucleophilicity of the primary amine. With the help of energy decomposition analysis (EDA) at the transition state structures we quantify the underlying stereo-electronic effects and propose new avenues for experimental exploration of the potential of SuFEx chemistry.
- Published
- 2020
26. Effect of Heteroaromaticity on Adsorption of Pyrazine on the Ge(100)-2×1 Surface
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Fabian Pieck, Ralf Tonner, Stacey F. Bent, and Tania E. Sandoval
- Subjects
Surface (mathematics) ,chemistry.chemical_compound ,General Energy ,Materials science ,Adsorption ,X-ray photoelectron spectroscopy ,Pyrazine ,chemistry ,Physical chemistry ,Density functional theory ,Physical and Theoretical Chemistry ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials - Abstract
The reaction of pyrazine with the Ge(100)-2×1 surface has been investigated by X-ray photoelectron spectroscopy (XPS) and density functional theory calculations. Results show that pyrazine reacts w...
- Published
- 2020
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27. On-Surface Formation of a Transient Corrole Radical and Aromaticity-Driven Interfacial Electron Transfer
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Martin Bröring, Malte Zugermeier, Martin Schmid, Benedikt P. Klein, J. Michael Gottfried, Jan Herritsch, Min Chen, Peter Schweyen, Falk Niefind, Jan-Niclas Luy, and Ralf Tonner
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Electron density ,Materials science ,Aromaticity ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,Photochemistry ,01 natural sciences ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Metal ,chemistry.chemical_compound ,Electron transfer ,General Energy ,Clos network ,chemistry ,visual_art ,visual_art.visual_art_medium ,Reactivity (chemistry) ,Transient (oscillation) ,Physical and Theoretical Chemistry ,Corrole ,0210 nano-technology - Abstract
Corroles on metal surfaces show substantial reactivity and aromaticity-driven interfacial electron transfer of their transient σ/π-radicals. These effects are much more pronounced than for the clos...
- Published
- 2020
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28. Adsorption of Methyl-Substituted Benzylazide on Si(001): Reaction Channels and Final Configurations
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Ralf Tonner, Jannick Meinecke, Michael Dürr, Christian Länger, Jan-Niclas Luy, Ulrich Koert, and Julian Heep
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Materials science ,Silicon ,Analytical chemistry ,chemistry.chemical_element ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,law.invention ,General Energy ,Adsorption ,chemistry ,X-ray photoelectron spectroscopy ,law ,Physical and Theoretical Chemistry ,Scanning tunneling microscope ,0210 nano-technology - Abstract
The reaction of a methyl-substituted benzylazide on the silicon (001) surface was investigated by means of X-ray photoelectron spectroscopy (XPS), scanning tunneling microscopy (STM), and density f...
- Published
- 2020
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29. Molecular Topology and the Surface Chemical Bond: Alternant Versus Nonalternant Aromatic Systems as Functional Structural Elements
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Benedikt P. Klein, Nadine J. van der Heijden, Stefan R. Kachel, Markus Franke, Claudio K. Krug, Katharina K. Greulich, Lukas Ruppenthal, Philipp Müller, Phil Rosenow, Shayan Parhizkar, François C. Bocquet, Martin Schmid, Wolfgang Hieringer, Reinhard J. Maurer, Ralf Tonner, Christian Kumpf, Ingmar Swart, and J. Michael Gottfried
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Physics ,QC1-999 - Abstract
The interaction of carbon-based aromatic molecules and nanostructures with metals can strongly depend on the topology of their π-electron systems. This is shown with a model system using the isomers azulene, which has a nonalternant π system with a 5-7 ring structure, and naphthalene, which has an alternant π system with a 6-6 ring structure. We found that azulene can interact much more strongly with metal surfaces. On copper (111), its zero-coverage desorption energy is 1.86 eV, compared to 1.07 eV for naphthalene. The different bond strengths are reflected in the adsorption heights, which are 2.30 Å for azulene and 3.04 Å for naphthalene, as measured by the normal incidence x-ray standing wave technique. These differences in the surface chemical bond are related to the electronic structure of the molecular π systems. Azulene has a low-lying LUMO that is close to the Fermi energy of Cu and strongly hybridizes with electronic states of the surface, as is shown by photoemission, near-edge x-ray absorption fine-structure, and scanning tunneling microscopy data in combination with theoretical analysis. According to density functional theory calculations, electron donation from the surface into the molecular LUMO leads to negative charging and deformation of the adsorbed azulene. Noncontact atomic force microscopy confirms the deformation, while Kelvin probe force microscopy maps show that adsorbed azulene partially retains its in-plane dipole. In contrast, naphthalene experiences only minor adsorption-induced changes of its electronic and geometric structure. Our results indicate that the electronic properties of metal-organic interfaces, as they occur in organic (opto)electronic devices, can be tuned through modifications of the π topology of the molecular organic semiconductor, especially by introducing 5-7 ring pairs as functional structural elements.
- Published
- 2019
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30. Bonding character of intermediates in on-surface Ullmann reactions revealed with energy decomposition analysis
- Author
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Jan‐Niclas Luy, Pascal Henkel, Daniel Grigjanis, Jannis Jung, Doreen Mollenhauer, and Ralf Tonner‐Zech
- Subjects
Computational Mathematics ,General Chemistry - Abstract
On-surface synthesis has become a thriving topic in surface science. The Ullmann coupling reaction is the most applied synthetic route today, but the nature of the organometallic intermediate is still under discussion. We investigate the bonding nature of prototypical intermediate species (phenyl, naphthyl, anthracenyl, phenanthryl, and triphenylenyl) on the Cu(111) surface with a combination of plane wave and atomic orbital basis set methods using density functional theory calculations with periodic boundary conditions. The surface bonding is shown to be of covalent nature with a polarized shared-electron bond supported by π-back donation effects using energy decomposition analysis for extended systems (pEDA). The bond angle of the intermediates is determined by balancing dispersion attraction and Pauli repulsion between adsorbate and surface. The latter can be significantly reduced by adatoms on the surface. We furthermore investigate how to choose computational parameters for pEDA of organic adsorbates on metal surfaces efficiently and show that bonding interpretation requires consistent choice of the density functional.
- Published
- 2022
31. Systematic strain-induced bandgap tuning in binary III-V semiconductors from density functional theory
- Author
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Badal Mondal and Ralf Tonner-Zech
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Condensed Matter - Materials Science ,Materials Science (cond-mat.mtrl-sci) ,FOS: Physical sciences ,Condensed Matter Physics ,Mathematical Physics ,Atomic and Molecular Physics, and Optics - Abstract
The modification of the nature and size of bandgaps for III-V semiconductors is of strong interest for optoelectronic applications. Strain can be used to systematically tune the bandgap over a wide range of values and induce indirect-to-direct transition (IDT), direct-to-indirect transition (DIT), and other changes in bandgap nature. Here, we establish a predictive first-principles approach, based on density functional theory, to analyze the effect of uniaxial, biaxial, and isotropic strain on the bandgap. We show that systematic variation is possible. For GaAs, DITs are observed at 1.56% isotropic compressive strain and 3.52% biaxial tensile strain, while for GaP an IDT is found at 2.63% isotropic tensile strain. We additionally propose a strategy for the realization of direct-to-indirect transition by combining biaxial strain with uniaxial strain. Further transition points are identified for strained GaSb, InP, InAs, and InSb and compared to the elemental semiconductor silicon. Our analyses thus provide a systematic and predictive approach to strain-induced bandgap tuning in binary III-V semiconductors.
- Published
- 2022
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32. Bond Insertion at Distorted Si(001) Subsurface Atoms
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Lisa Pecher and Ralf Tonner
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adsorption ,bond activation ,bonding analysis ,density functional theory ,distorted coordination ,molecular orbital analysis ,silicon surfaces ,Inorganic chemistry ,QD146-197 - Abstract
Using density functional theory (DFT) methods, we analyze the adsorption of acetylene and ethylene on the Si(001) surface in an unusual bond insertion mode. The insertion takes place at a saturated tetravalent silicon atom and the insight gained can thus be transferred to other saturated silicon compounds in molecular and surface chemistry. Molecular orbital analysis reveals that the distorted and symmetry-reduced coordination of the silicon atoms involved due to surface reconstruction raises the electrophilicity and, additionally, makes certain σ bond orbitals more accessible. The affinity towards bond insertion is, therefore, caused by the structural constraints of the surface. Additionally, periodic energy decomposition analysis (pEDA) is used to explain why the bond insertion structure is much more stable for acetylene than for ethylene. The increased acceptor abilities of acetylene due to the presence of two π*-orbitals (instead of one π*-orbital and a set of σ*(C–H) orbitals for ethylene), as well as the lower number of hydrogen atoms, which leads to reduced Pauli repulsion with the surface, are identified as the main causes. While our findings imply that this structure might be an intermediate in the adsorption of acetylene on Si(001), the predicted product distributions are in contradiction to the experimental findings. This is critically discussed and suggestions to resolve this issue are given.
- Published
- 2018
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33. [{(PhSn)3SnS6}{(MCp)3S4}] (M = W, Mo): Minimal Molecular Models of the Covalent Attachment of Metal Chalcogenide Clusters on Doped Transition Metal Dichalcogenide Layers
- Author
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Ralf Tonner, Fabian Pieck, Stefanie Dehnen, and Eike Dornsiepen
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Chemistry ,Chalcogenide ,Ligand ,General Chemistry ,010402 general chemistry ,01 natural sciences ,Biochemistry ,Catalysis ,0104 chemical sciences ,Metal ,Crystallography ,symbols.namesake ,chemistry.chemical_compound ,Colloid and Surface Chemistry ,Transition metal ,Covalent bond ,visual_art ,Monolayer ,Cluster (physics) ,symbols ,visual_art.visual_art_medium ,van der Waals force - Abstract
With the aim to mimic the yet unknown covalent deposition of metal chalcogenide clusters on transition metal dichalcogenide (TMDC) MoS2 or WS2 layers, and thereby explore the interaction between the two systems and potential consequences on physical properties of the TMDC material, we synthesized heterobimetallic model systems. The heterocubane-type cluster [(SnCl3)(WCp)3S4] (1), the organotin-sulfidomolybdate cluster [{(PhSn)3SnS6}{(MoCp)3S4}] (2), and the corresponding tungstate [(PhSn)3SnS6{(WCp)3S4}] (3) were obtained in ligand exchange reactions from [(PhSn)4S6] and [M(CO)3CpCl]. Indeed, the {M3S4} cages in 1-3 resemble a section of the respective TMDC monolayers, altogether representing minimal molecular model systems for the adsorption of organotin sulfide clusters on MoS2 or WS2. The interaction between the {(MCp)3S4} and {(PhSn)3SnS6} subunits is characterized by multicenter bonding, rendering the respective Sn atom as Sn(II), hence driving the clusters into a mixed-valence Sn(IV)/Sn(II) situation, and the M atoms as M(IV) upon an in situ redox process. The attachment is thus weaker than via regular covalent M-S bonds, but definitely stronger than via van der Waals interactions that have been characteristic for all known interactions of clusters on TMDC surfaces so far. Computational analyses of an extended model mimicking the electronic situation in the cluster prove the analogy to a covalent attachment on TMDCs.
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- 2019
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34. Gezielte Singulett‐Sauerstofferzeugung durch bioorthogonale DNA‐basierte Tetrazin‐Ligation
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Fabian Pieck, Olalla Vázquez, Ralf Tonner, Greta Linden, Uwe Linne, Lei Zhang, and Dmitri Kosenkov
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Chemistry ,General Medicine - Published
- 2019
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35. Understanding the Correlation between Electronic Coupling and Energetic Stability of Molecular Crystal Polymorphs: The Instructive Case of Quinacridone
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Ralf Tonner, Christian Winkler, Florian Mayer, Oliver T. Hofmann, Andreas Jeindl, and Egbert Zojer
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Condensed Matter - Materials Science ,Materials science ,General Chemical Engineering ,education ,technology, industry, and agriculture ,Materials Science (cond-mat.mtrl-sci) ,FOS: Physical sciences ,Charge (physics) ,02 engineering and technology ,General Chemistry ,equipment and supplies ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,Crystal ,Organic semiconductor ,chemistry.chemical_compound ,Coupling (physics) ,chemistry ,Chemical physics ,Quinacridone ,Materials Chemistry ,0210 nano-technology - Abstract
A crucial factor determining charge transport in organic semiconductors is the electronic coupling between the molecular constituents, which is heavily influenced by the relative arrangement of the molecules. This renders quinacridone, with its multiple, structurally fundamentally different polymorphs and their diverse intermolecular interactions an ideal test case for analyzing the correlation between the electronic coupling in a specific configuration and the configuration's energetic stability. To provide an in-depth analysis of this correlation, starting from the $\alpha$-polymorph of quinacridone, we also construct a coplanar model crystal. This allows us to systematically compare the displacement-dependence of the electronic coupling with that of the total energy. In this way, we identify the combination of Pauli repulsion and orbital rehybridization as the driving force steering the system towards a structure in which the electronic coupling is minimal (especially for the valence band and at small displacements). The general nature of these observations is supported by equivalent trends for an analogous pentacene model system. This underlines that the design of high-performance materials cannot rely on the "natural" assembly of the $\pi$-conjugated backbones of organic semiconductors into their most stable configurations. Rather, it must include the incorporation of functional groups that steer crystal packing towards more favorable structures, where aiming for short-axis displacements or realizing comparably large long-axis displacements appear as strategies worthwhile exploring., Comment: This article has been removed by arXiv administrators because the submitter did not have the rights to agree to the license at the time of submission
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- 2019
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36. Alkyne-Functionalized Cyclooctyne on Si(001): Reactivity Studies and Surface Bonding from an Energy Decomposition Analysis Perspective
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Ralf Tonner-Zech and Fabian Pieck
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Materials science ,Pharmaceutical Science ,Organic chemistry ,Article ,Analytical Chemistry ,silicon surface ,Adsorption ,QD241-441 ,organic functionalization ,nudged elastic band ,Computational chemistry ,Drug Discovery ,Molecule ,Reactivity (chemistry) ,Physical and Theoretical Chemistry ,density functional theory ,pEDA ,Exergonic reaction ,ab initio molecular dynamics ,chemical bonding ,Chemical bond ,Chemistry (miscellaneous) ,Selective adsorption ,ddc:540 ,Molecular Medicine ,Surface modification ,Density functional theory - Abstract
The reactivity and bonding of an ethinyl-functionalized cyclooctyne on Si(001) is studied by means of density functional theory. This system is promising for the organic functionalization of semiconductors. Singly bonded adsorption structures are obtained by [2 + 2] cycloaddition reactions of the cyclooctyne or ethinyl group with the Si(001) surface. A thermodynamic preference for adsorption with the cyclooctyne group in the on-top position is found and traced back to minimal structural deformation of the adsorbate and surface with the help of energy decomposition analysis for extended systems (pEDA). Starting from singly bonded structures, a plethora of reaction paths describing conformer changes and consecutive reactions with the surface are discussed. Strongly exothermic and exergonic reactions to doubly bonded structures are presented, while small reaction barriers highlight the high reactivity of the studied organic molecule on the Si(001) surface. Dynamic aspects of the competitive bonding of the functional groups are addressed by ab initio molecular dynamics calculations. Several trajectories for the doubly bonded structures are obtained in agreement with calculations using the nudged elastic band approach. However, our findings disagree with the experimental observations of selective adsorption by the cyclooctyne moiety, which is critically discussed.
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- 2021
37. Relevance of π-Backbonding for the Reactivity of Electrophilic Anions [B
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Martin, Mayer, Markus, Rohdenburg, Sebastian, Kawa, Francine, Horn, Harald, Knorke, Carsten, Jenne, Ralf, Tonner, Knut R, Asmis, and Jonas, Warneke
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IRPD spectroscopy ,Full Paper ,Hot Paper ,electrophilic anions ,Full Papers ,boron ,π-backbonding ,mass spectrometry - Abstract
Electrophilic anions of type [B12X11]− posses a vacant positive boron binding site within the anion. In a comparatitve experimental and theoretical study, the reactivity of [B12X11]− with X=F, Cl, Br, I, CN is characterized towards different nucleophiles: (i) noble gases (NGs) as σ‐donors and (ii) CO/N2 as σ‐donor‐π‐acceptors. Temperature‐dependent formation of [B12X11NG]− indicates the enthalpy order (X=CN)>(X=Cl)≈(X=Br)>(X=I)≈(X=F) almost independent of the NG in good agreement with calculated trends. The observed order is explained by an interplay of the electron deficiency of the vacant boron site in [B12X11]− and steric effects. The binding of CO and N2 to [B12X11]− is significantly stronger. The B3LYP 0 K attachment enthapies follow the order (X=F)>(X=CN)>(X=Cl)>(X=Br)>(X=I), in contrast to the NG series. The bonding motifs of [B12X11CO]− and [B12X11N2]− were characterized using cryogenic ion trap vibrational spectroscopy by focusing on the CO and N2 stretching frequencies νCO and νN2 , respectively. Observed shifts of νCO and νN2 are explained by an interplay between electrostatic effects (blue shift), due to the positive partial charge, and by π‐backdonation (red shift). Energy decomposition analysis and analysis of natural orbitals for chemical valence support all conclusions based on the experimental results. This establishes a rational understanding of [B12X11]− reactivety dependent on the substituent X and provides first systematic data on π‐backdonation from delocalized σ‐electron systems of closo‐borate anions., A new type of π‐backbonding is discussed, which was observed between the π‐acceptors CO/N2 and the closo‐dodecaborate fragments [B12X11]− (X=F, Cl, Br, I, CN). The highly reactive [B12X11]− anions transfer electron density from their delocalized σ‐electron systems into antibonding orbitals of the respective acceptor molecules. Moreover, the comprehensive set of data provided with this study gives insights into the reactivity of [B12X11]− anions depending on the substituent X.
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- 2021
38. Frontispiz: Gemischte Gruppe‐14‐15‐Metallate als Modellverbindungen für dotierte Bleihalogenidperowskite
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Johanna Heine, Luca Schipplick, Sangam Chatterjee, Philip Klement, Natalie Dehnhardt, Jan-Niclas Luy, and Ralf Tonner
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General Medicine - Published
- 2021
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39. Organic Functionalization on the Non-Ideal Si(001) Surface – Structure, Bonding and Reactivity
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Jan-Niclas Luy and Ralf Tonner
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Steric effects ,chemistry.chemical_compound ,Adsorption ,Materials science ,Acetylene ,chemistry ,Vacancy defect ,Molecule ,Surface modification ,Density functional theory ,Reactivity (chemistry) ,Photochemistry - Abstract
In this density functional theory study, the influence of the dimer vacancy on the reactivity of the Si(001) surface is investigated. To this end, electronic and structural properties of the defect are analyzed. Band structure calculations reveal a higher-lying valence band which would suggest increased reactivity. However, the opposite is found when organic molecules for interface formation (acetylene, ethylene and cyclooctyne) are adsorbed at the defect. Significant reaction barriers have to be overcome in order to form bonds with defect atoms, while adsorption on the pristine surface is mostly direct. This suggests the presence of a, rather weak, Si-Si bond across the defect which must be dissociated before organic adsorbates can react. A rich adsorption and reaction network is found in addition to the structures known from the pristine surface. All three investigated adsorbates show different bonding characteristics. For acetylene and ethylene, the preferred thermodynamic sink is the insertion into the defect, with the latter molecule even dissociating. Bulky cyclooctyne on the other hand avoids reaction with the defect due to steric demands imposed by the small defect cavity. The DV has no effect on reactivity of neighboring dimers. A combination of defect creation and hydrogen-precoverage could be a promising approach for selective surface functionalization. We thus show the influence of a non-ideal surface on organic functionalization and interface build-up reactions for a prototypical interface.
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- 2021
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40. Solvent-Induced Bond-Bending Isomerism in Hexaphenyl Carbodiphosphorane: Decisive Dispersion Interactions in the Solid State
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Nis-Julian H. Kneusels, Jörn E. Münzer, Rik R. Tykwinski, Vladimir K. Michaelis, Marius Klein, Ralf Tonner, Bernhard Neumüller, Frank Hampel, Silas C. Böttger, Marco Gruber, Jörg Sundermeyer, Christina Poggel, Guy M. Bernard, and Istemi Kuzu
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010405 organic chemistry ,Chemistry ,Bent molecular geometry ,Solid-state ,Bending ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences ,3. Good health ,law.invention ,Inorganic Chemistry ,Solvent ,Crystallography ,law ,Moiety ,Physical and Theoretical Chemistry ,Crystallization ,Dispersion (chemistry) - Abstract
Previous reports in the literature describe that the crystallization of hexaphenyl carbodiphosphorane (CDPPh) from a variety of solvents gives a “bent” geometry for the P–C–P moiety as the solid-st...
- Published
- 2020
41. Towards Self-Doping Multimetal Porphyrin Systems
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Manfred T. Reetz, Ralf Tonner, and Richard Goddard
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chemistry.chemical_compound ,Electron transfer ,Materials science ,chemistry ,Yield (chemistry) ,Tetraphenylporphyrin ,Doping ,Cationic polymerization ,Density functional theory ,Chromocene ,Photochemistry ,Porphyrin - Abstract
Heating Cu(II)tetraphenylporphyrin (TPPCu) with chromocene at 120 °C affords the crystalline self-doped multimetal porphyrin system TPPCu/TPPCr in good yield. The X-ray structural analysis reveals a random configuration of TPPCu and TPPCr with a Cu:Cr ratio of about 71:29 %. Exploratory DFT calculations indicate significant electron transfer in a hypothetical cationic TPPCu/TPPRu system, in contrast to TPPCu/TPPCr.
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- 2020
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42. From Acenaphthenes to (+)-Delavatine A: Visible-Light-Induced Ring Closure of Methyl (α-Naphthyl) Acrylates
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Ralf Tonner, Theodor Peez, Ulrich Koert, Klaus Harms, and Jan-Niclas Luy
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Annulation ,010405 organic chemistry ,Stereochemistry ,Organic Chemistry ,Enantioselective synthesis ,Acenaphthene ,Acenaphthenes ,General Chemistry ,010402 general chemistry ,Ring (chemistry) ,01 natural sciences ,Catalysis ,0104 chemical sciences ,chemistry.chemical_compound ,chemistry ,Intramolecular force ,Amine gas treating ,Naphthalene - Abstract
Disclosed herein is a visible light mediated cyclization of methyl (α-naphthyl) acrylates and heteroaromatic analogues yielding substituted acenaphthenes and azaacenaphthenes. This highly functional-group-tolerant transformation was put to the test in an enantioselective formal synthesis of delavatine A. Mechanistic details were elucidated by DFT-calculations revealing an unusual intramolecular H-transfer mediated by a primary amine. The generality of this transformation enables a novel synthetic strategy of five membered ring annulation at an advanced stage, allowing reliance upon naphthalene chemistry up to the point of acenaphthene construction.
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- 2018
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43. Trendbericht Theoretische Chemie 2017: Quantenchemie für Funktionsmaterialien
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Ralf Tonner
- Subjects
General Chemical Engineering ,General Chemistry - Published
- 2018
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44. An experimental and computational study on isomerically pure, soluble azaphthalocyanines and their complexes and boron azasubphthalocyanines of a varying number of aza units
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Elisabeth Seikel, Veronika Novakova, Martin Liebold, Jörg Sundermeyer, Eugen Sharikow, Klaus Harms, Petr Zimcik, Ralf Tonner, and Lukas Trombach
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chemistry.chemical_classification ,Autoxidation ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,Electronic structure ,Chromophore ,010402 general chemistry ,01 natural sciences ,Biochemistry ,0104 chemical sciences ,Catalysis ,chemistry.chemical_compound ,Computational chemistry ,Pyridine ,Phthalocyanine ,Density functional theory ,Physical and Theoretical Chemistry ,Alkyl - Abstract
Herein, we present a series of isomerically pure, peripherally alkyl substituted, soluble and low aggregating azaphthalocyanines as well as their new, smaller hybrid homologues, azasubphthalocyanines. The focus lies on the effect of the systematically increasing number of aza building blocks [-N[double bond, length as m-dash]] replacing the non-peripheral [-CH[double bond, length as m-dash]] units and their influence on the physical and photophysical properties of these chromophores. The absolute and relative HOMO-LUMO energies of azaphthalocyanines were analyzed using UV-Vis and CV and compared to the density functional theory calculations (B3LYP, TD-DFT). The lowering of the HOMO level is revealed as the determining factor for the trend in the adsorption energies by electronic structure analysis. Crystals of substituted subphthalocyanines, N2-Pc*H2 and N4-[Pc*Zn·H2O], were obtained out of DCM. For the synthesis of the valuable tetramethyltetralin phthalocyanine building block a new highly efficient synthesis involving a nearly quantitative CoII catalyzed aerobic autoxidation step is introduced replacing inefficient KMnO4/pyridine as the oxidant.
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- 2018
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45. Modeling the Complex Adsorption Dynamics of Large Organic Molecules: Cyclooctyne on Si(001)
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Sebastian Schmidt, Ralf Tonner, and Lisa Pecher
- Subjects
Chemistry ,Dynamics (mechanics) ,Ab initio ,Complex system ,02 engineering and technology ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,Organic molecules ,General Energy ,Adsorption ,Chemical physics ,Computational chemistry ,Potential energy surface ,Molecule ,Density functional theory ,Physical and Theoretical Chemistry ,0210 nano-technology - Abstract
Surprising adsorption dynamics in terms of an either direct or pseudodirect pathway in contrast to common precursor-mediated surface reactions is shown for the title system by theoretical investigations. We present a computational protocol for the description of the adsorption dynamics in this complex system that is transferable to other large molecules. The system size prohibits the use of established accurate methods, and approximations have to be made and validated. Our approach combines potential energy surface scans, reaction path determination methods, statistical thermodynamics, and ab initio molecular dynamics simulations based on density functional theory (DFT). This leads to a conclusive picture of adsorption dynamics in the limits of DFT accuracy and shows how a thoughtful selection of methods can comprehensively describe the adsorption dynamics of an experimentally relevant system that might seem too complex for ab initio approaches at first glance.
- Published
- 2017
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46. Ether auf Si(001): Ein Paradebeispiel für die Gemeinsamkeiten zwischen Oberflächenwissenschaften und organischer Molekülchemie
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Slimane Laref, Ralf Tonner, Marc Raupach, and Lisa Pecher
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010405 organic chemistry ,General Medicine ,010402 general chemistry ,01 natural sciences ,0104 chemical sciences - Abstract
Wir zeigen mit quantenchemischen Methoden, dass sich die Adsorption von Ether-Molekulen auf Si(001) im Ultrahochvakuum durch klassische Konzepte der organischen Molekulchemie verstehen lasst. Wie unsere detaillierte Analyse zeigt, spiegelt der zweistufige Mechanismus – 1) Ausbildung einer dativen Bindung zwischen dem Sauerstoffatom am Ether und einem Lewis-sauren Oberflachenatom, 2) nukleophiler Angriff eines nahegelegenen Lewis-basischen Oberflachenatoms – die saurekatalysierte Etherspaltung in Losung wider. Zudem ist die dative O-Si-Bindung die starkste ihrer Art und die Reaktivitat in Schritt 2 verlauft entgegen dem Bell-Evans-Polanyi-Prinzip. Mithilfe einer neuartigen Methode der Bindungsanalyse wird auserdem die Umverteilung von Elektronendichte wahrend des C-O-Bindungsbruchs visualisiert. Hierbei wird deutlich, dass der Mechanismus nukleophiler Substitutionen auf Halbleiteroberflachen identisch zu molekularen SN2-Reaktionen ist. Unsere Untersuchungen verdeutlichen, wie die Forschungsfelder der Oberflachenwissenschaften und Molekulchemie voneinander profitieren konnen und so unerwartete Einblicke ermoglichen.
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- 2017
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47. Ethers on Si(001): A Prime Example for the Common Ground between Surface Science and Molecular Organic Chemistry
- Author
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Ralf Tonner, Slimane Laref, Marc Raupach, and Lisa Pecher
- Subjects
Reaction mechanism ,Chemistry ,Ether ,02 engineering and technology ,General Chemistry ,010402 general chemistry ,021001 nanoscience & nanotechnology ,01 natural sciences ,Catalysis ,0104 chemical sciences ,chemistry.chemical_compound ,Nucleophile ,Physical organic chemistry ,Organic chemistry ,Molecule ,SN2 reaction ,0210 nano-technology ,Ether cleavage ,Bond cleavage - Abstract
Using computational chemistry, we show that the adsorption of ether molecules on Si(001) under ultra-high vacuum conditions can be understood with textbook organic chemistry. The two-step reaction mechanism of (1) dative bond formation between the ether oxygen and a Lewis acidic surface atom and (2) a nucleophilic attack of a nearby Lewis basic surface atom is analysed in detail and found to mirror the acid-catalysed ether cleavage in solution. The O-Si dative bond is found to be the strongest of its kind and reactivity from this state defies the Bell-Evans-Polanyi principle. Electron rearrangement during the C-O bond cleavage is visualized using a newly developed bonding analysis method, which shows that the mechanism of nucleophilic substitutions on semiconductor surfaces is identical to molecular chemistry SN2 reactions. Our findings thus illustrate how the fields of surface science and molecular chemistry can mutually benefit and unexpected insight can be gained.
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- 2017
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48. Enhanced bonding of pentagon–heptagon defects in graphene to metal surfaces : insights from the adsorption of azulene and naphthalene to Pt(111)
- Author
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Ralf Tonner, Spencer J. Carey, Samuel J. Hall, Lukas Ruppenthal, Griffin M. Ruehl, Benedikt P. Klein, Charles T. Campbell, J. Michael Gottfried, Jan Herritsch, S. Elizabeth Harman, Reinhard J. Maurer, and Martin Schmid
- Subjects
Materials science ,General Chemical Engineering ,02 engineering and technology ,010402 general chemistry ,01 natural sciences ,law.invention ,Metal ,chemistry.chemical_compound ,Adsorption ,law ,Materials Chemistry ,QD ,Heptagon ,Naphthalene ,Graphene ,General Chemistry ,Azulene ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,Pentagon ,chemistry ,TA ,Chemical physics ,visual_art ,visual_art.visual_art_medium ,0210 nano-technology - Abstract
The performance of graphene-based (opto)electronic devices depends critically on the graphene/metal interface formed at the metal contacts. We show here that the interface properties may be controlled by topological defects, such as the pentagon–heptagon (5–7) pairs, because of their strongly enhanced bonding to the metal. To measure the bond energy and other key properties not accessible for the embedded defects, we use azulene as a molecular model for the 5–7 defect. Comparison to its isomer naphthalene, which represents the regular graphene structure, reveals that azulene interacts more strongly with a Pt(111) surface. Its adsorption energy, as measured by single-crystal adsorption calorimetry (SCAC), exceeds that of naphthalene by up to 116 kJ/mol (or up to 50%). Both isomers undergo hybridization of their frontier orbitals with metal states, as indicated by X-ray and ultraviolet photoelectron spectroscopy (XPS/UPS) and near-edge X-ray absorption fine structure (NEXAFS) spectroscopy combined with molecular orbital (MO) projection analysis through dispersion-corrected, periodic density functional theory (DFT) calculations. Based on the NEXAFS/DFT analysis, the stronger bond of the 5–7 system is attributed to the different energetic response of its unoccupied frontier orbitals to adsorption. Adsorption-induced bond-length changes show substantial topology-related differences between the isomers. Electron transfer occurs in both directions through donation/back-donation, resulting in the partial occupation (deoccupation) of formerly unoccupied (occupied) orbitals, as revealed by periodic energy decomposition analysis (pEDA) for extended systems. Our model study shows that the topology of the π-electron system strongly affects its bonding to a transition metal and thus can be utilized to tailor interface properties.\ud \ud
- Published
- 2020
49. Influence of Ring Contraction on the Electronic Structure of Nickel Tetrapyrrole Complexes: Corrole vs Porphyrin
- Author
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Martin Bröring, Jan Herritsch, Jan-Niclas Luy, Kai Rossnagel, M. Kalläne, Manuel Gruber, Ralf Tonner, Peter Schweyen, Sebastian Rohlf, Benedikt P. Klein, and J. Michael Gottfried
- Subjects
Materials science ,Electronic structure ,Porphyrin ,XANES ,Electronic, Optical and Magnetic Materials ,chemistry.chemical_compound ,Crystallography ,chemistry ,X-ray photoelectron spectroscopy ,ddc:660 ,Density functional theory ,Valence bond theory ,Corrole ,Ultraviolet photoelectron spectroscopy - Abstract
ECS journal of solid state science and technology 9(6), 061005 - (2020). doi:10.1149/2162-8777/ab9e18, The influence of the contracted corrole macrocycle, in comparison to the larger porphyrin macrocycle, on the electronic structure of nickel was studied with X-ray and ultraviolet photoelectron spectroscopy (XPS, UPS) and near-edge X-ray absorption fine structure (NEXAFS) spectroscopy. Synthesis and in situ characterization of the Ni complexes of octaethylporphyrin (NiOEP) and hexaethyldimethylcorrole (NiHEDMC) were performed in ultra-high vacuum. XPS and NEXAFS spectra reveal a +2 oxidation state and a low-spin d8 electron configuration of Ni in both complexes, despite the formal trianionic nature of the corrole ligand. UPS, in combination with density functional theory (DFT) calculations, support the electronic structure of a Ni(II) corrole with a π-radical character of the ligand. The NEXAFS spectra also reveal differences in the valence electronic structure, which are attributed to the size mismatch between the small Ni(II) center and the larger central cavity of NiOEP. Analysis of the gas-phase structures shows that the Ni−N bonds in NiOEP are 4%–6% longer than those in NiHEDMC, even when NiOEP adopts a ruffled conformation. The individual interactions that constitute the Ni−ligand bond are altogether stronger in the corrole complex, according to bonding analysis within the energy decomposition analysis and the natural orbitals for chemical valence theory (EDA-NOCV)., Published by ECS, Pennington, NJ
- Published
- 2020
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50. Chemisorption and physisorption at the metal/organic interface : Bond energies of naphthalene and azulene on coinage metal surfaces
- Author
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Peter Kratzer, Benedikt P. Klein, Maik Schöniger, Ralf Tonner, Martin Schmid, Stefan R. Kachel, Bernd Meyer, Mark Hutter, J. Michael Gottfried, and Juliana M. Morbec
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Materials science ,Organic interface ,02 engineering and technology ,010402 general chemistry ,Heterogeneous catalysis ,Photochemistry ,Q1 ,01 natural sciences ,Metal ,chemistry.chemical_compound ,Physisorption ,QD ,Physical and Theoretical Chemistry ,Bond energy ,Naphthalene ,Azulene ,Physik (inkl. Astronomie) ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,Surfaces, Coatings and Films ,Electronic, Optical and Magnetic Materials ,General Energy ,chemistry ,Chemisorption ,visual_art ,visual_art.visual_art_medium ,0210 nano-technology - Abstract
Organic/inorganic hybrid interfaces play a prominent role in organic (opto)electronics, heterogeneous catalysis, sensors, and other current fields of technology. The performance of the related devices and processes depends critically on the nature and strength of interfacial interaction. Here, we use the molecular isomers naphthalene (Nt) and azulene (Az) on the Ag(111) and Cu(111) surfaces as model systems that cover different bonding regimes from physisorption to chemisorption. Az also serves as a model for nonalternant molecular electronic materials and for topological 5–7 defects in graphene. The interaction energies are determined from the quantitative analysis of temperature-programmed desorption data. On both surfaces, Az binds more strongly than Nt, with zero-coverage desorption energies (in kJ/mol) of 120 for Az/Ag and 179 for Az/Cu, compared to 103 for Nt/Ag and 114 for Nt/Cu. The integrated experimental energies are compared with adsorption energies from density-functional theory (DFT) calculations, which include van der Waals contributions using four different correction schemes for the PBE functional: (1) the DFT-D3 scheme with Becke–Johnson damping, (2) the vdWsurf correction based on DFT-TS, (3) a many-body dispersion correction scheme, and (4) the D3surf scheme. Differences in the performance of these methods are discussed. Periodic energy decomposition analysis reveals details of the surface chemical bond and confirms that Az/Cu forms a chemisorptive bond, while the other systems are physisorbed. The variation of the adsorbate–substrate interaction with the topology of the π-electron system and the type of surface can be employed to modify the interface properties in graphene-based and organic electronic devices.
- Published
- 2020
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