58 results on '"P. Goret"'
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2. Latent Space Data Assimilation by using Deep Learning
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Peyron, Mathis, Fillion, Anthony, Gürol, Selime, Marchais, Victor, Gratton, Serge, Boudier, Pierre, and Goret, Gael
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Computer Science - Machine Learning ,Mathematics - Numerical Analysis - Abstract
Performing Data Assimilation (DA) at a low cost is of prime concern in Earth system modeling, particularly at the time of big data where huge quantities of observations are available. Capitalizing on the ability of Neural Networks techniques for approximating the solution of PDE's, we incorporate Deep Learning (DL) methods into a DA framework. More precisely, we exploit the latent structure provided by autoencoders (AEs) to design an Ensemble Transform Kalman Filter with model error (ETKF-Q) in the latent space. Model dynamics are also propagated within the latent space via a surrogate neural network. This novel ETKF-Q-Latent (thereafter referred to as ETKF-Q-L) algorithm is tested on a tailored instructional version of Lorenz 96 equations, named the augmented Lorenz 96 system: it possesses a latent structure that accurately represents the observed dynamics. Numerical experiments based on this particular system evidence that the ETKF-Q-L approach both reduces the computational cost and provides better accuracy than state of the art algorithms, such as the ETKF-Q., Comment: 15 pages, 7 figures and 3 tables
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- 2021
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3. Effect of substrate fertility on tank-bromeliad performances
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Lafont Rapnouil, Tristan, Coste, Sabrina, Goret, Jean-Yves, Julien, Frédéric, Stahl, Clément, and Leroy, Céline
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- 2023
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4. Amazon tree dominance across forest strata
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Draper, Frederick C., Costa, Flavia R. C., Arellano, Gabriel, Phillips, Oliver L., Duque, Alvaro, Macía, Manuel J., ter Steege, Hans, Asner, Gregory P., Berenguer, Erika, Schietti, Juliana, Socolar, Jacob B., de Souza, Fernanda Coelho, Dexter, Kyle G., Jørgensen, Peter M., Tello, J. Sebastian, Magnusson, William E., Baker, Timothy R., Castilho, Carolina V., Monteagudo-Mendoza, Abel, Fine, Paul V. A., Ruokolainen, Kalle, Coronado, Euridice N. Honorio, Aymard, Gerardo, Dávila, Nállarett, Sáenz, Mauricio Sánchez, Paredes, Marcos A. Rios, Engel, Julien, Fortunel, Claire, Paine, C. E. Timothy, Goret, Jean-Yves, Dourdain, Aurelie, Petronelli, Pascal, Allie, Elodie, Andino, Juan E. Guevara, Brienen, Roel J. W., Pérez, Leslie Cayola, Manzatto, Ângelo G., Zambrana, Narel Y. Paniagua, Molino, Jean-François, Sabatier, Daniel, Chave, Jerôme, Fauset, Sophie, Villacorta, Roosevelt Garcia, Réjou-Méchain, Maxime, Berry, Paul E., Melgaço, Karina, Feldpausch, Ted R., Sandoval, Elvis Valderamma, Martinez, Rodolfo Vasquez, Mesones, Italo, Junqueira, André B., Roucoux, Katherine H., de Toledo, José J., Andrade, Ana C., Camargo, José Luís, del Aguila Pasquel, Jhon, Santana, Flávia D., Laurance, William F., Laurance, Susan G., Lovejoy, Thomas E., Comiskey, James A., Galbraith, David R., Kalamandeen, Michelle, Aguilar, Gilberto E. Navarro, Arenas, Jim Vega, Guerra, Carlos A. Amasifuen, Flores, Manuel, Llampazo, Gerardo Flores, Montenegro, Luis A. Torres, Gomez, Ricardo Zarate, Pansonato, Marcelo P., Moscoso, Victor Chama, Vleminckx, Jason, Barrantes, Oscar J. Valverde, Duivenvoorden, Joost F., de Sousa, Sidney Araújo, Arroyo, Luzmila, Perdiz, Ricardo O., Cravo, Jessica Soares, Marimon, Beatriz S., Junior, Ben Hur Marimon, Carvalho, Fernanda Antunes, Damasco, Gabriel, Disney, Mathias, Vital, Marcos Salgado, Diaz, Pablo R. Stevenson, Vicentini, Alberto, Nascimento, Henrique, Higuchi, Niro, Van Andel, Tinde, Malhi, Yadvinder, Ribeiro, Sabina Cerruto, Terborgh, John W., Thomas, Raquel S., Dallmeier, Francisco, Prieto, Adriana, Hilário, Renato R., Salomão, Rafael P., Silva, Richarlly da Costa, Casas, Luisa F., Vieira, Ima C. Guimarães, Araujo-Murakami, Alejandro, Arevalo, Fredy Ramirez, Ramírez-Angulo, Hirma, Torre, Emilio Vilanova, Peñuela, Maria C., Killeen, Timothy J., Pardo, Guido, Jimenez-Rojas, Eliana, Castro, Wenderson, Cabrera, Darcy Galiano, Pipoly, John, de Sousa, Thaiane Rodrigues, Silvera, Marcos, Vos, Vincent, Neill, David, Vargas, Percy Núñez, Vela, Dilys M., Aragão, Luiz E. O. C., Umetsu, Ricardo Keichi, Sierra, Rodrigo, Wang, Ophelia, Young, Kenneth R., Prestes, Nayane C. C. S., Massi, Klécia G., Huaymacari, José Reyna, Gutierrez, Germaine A. Parada, Aldana, Ana M., Alexiades, Miguel N., Baccaro, Fabrício, Céron, Carlos, Muelbert, Adriane Esquivel, Rios, Julio M. Grandez, Lima, Antonio S., Lloyd, Jonathan L., Pitman, Nigel C. A., Gamarra, Luis Valenzuela, Oroche, Cesar J. Cordova, Fuentes, Alfredo F., Palacios, Walter, Patiño, Sandra, Torres-Lezama, Armando, and Baraloto, Christopher
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- 2021
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5. Is vulnerability segmentation at the leaf-stem transition a drought resistance mechanism? A theoretical test with a trait-based model for Neotropical canopy tree species
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Levionnois, Sébastien, Ziegler, Camille, Heuret, Patrick, Jansen, Steven, Stahl, Clément, Calvet, Emma, Goret, Jean-Yves, Bonal, Damien, and Coste, Sabrina
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- 2021
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6. Platelets and IgE: Shaping the Innate Immune Response in Systemic Lupus Erythematosus
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Brilland, Benoit, Scherlinger, Marc, Khoryati, Liliane, Goret, Julien, Duffau, Pierre, Lazaro, Estibaliz, Charrier, Manon, Guillotin, Vivien, Richez, Christophe, and Blanco, Patrick
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- 2020
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7. Diagnosing between papillary carcinoma and reactive papillary changes in an infarcted thyroid nodule after fine needle aspiration and accompanied by a synchronous brain stem astrocytoma
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Ceren Canbey Goret, Nuri Emrah Goret, Omer Faruk Ozkan, and Muammer Karaayvaz
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infarction after biopsi ,synchronous tumor ,thyroid papillary carcinoma. ,Medicine ,Medicine (General) ,R5-920 - Abstract
A 22-year-old patient underwent fine needle aspiration of a nodule at the outer center of the right lobe of the thyroid, and it was reported to be Bethesda system category IV, Hurthle cell follicular neoplasia. The patient, who persented to Onsekiz Mart University Research and Application Hospital, underwent surgery. During right total thyroidectomy, an almost totally infarcted nodule and papillary structures around these infarcted areas were detected. Herein, we report on diagnostic challenges faced in confirming whether the infarcted nodule was a case of reactive papillary changes or an underdiagnosed papillary carcinoma and how the challenges were overcome using immunohistochemistry analysis and molecular genetic testing. In addition, we examined the case along with a literature review because an accompanying synchronous brain stem astrocytoma was detected in the patient after thyroidectomy.
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- 2018
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8. The effect of pycnogenol on lymphatic nodes and adhesion during in a peritoneal adhesion model in rats
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Ceren Canbey Goret, Nuri Emrah Goret, Asli Kiraz, Omer Faruk Ozkan, and Muammer Karaayvaz
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Pycnogenol ,Lymphadenopathy ,Free Radicals ,Rats. ,Surgery ,RD1-811 - Abstract
Abstract Purpose: To investigate the effects of pycnogenol on peritoneal adhesions and additionally to investigate the immunohistochemical effects of free oxygen radicals and reactive lymph nodes detected in the adhesive tissue that was sampled surrounding the cecum on intra-abdominal adhesions. Methods: Twenty-seven Wistar Albino rats were divided into three groups. In group 1 (sham), laparotomy was performed and stitched up. In group 2 (control), after laparotomy was performed, punctate hemorrhage was induced by cecal abrasion in the cecum and each rat was intraperitoneally administered 2 cc of saline. In group 3 (experimental), after laparotomy was performed, punctate hemorrhage was induced by cecal abrasion in the cecum and each rat was intraperitoneally administered a sterile Pycnogenol derivative. The rats in all groups were re-laparotomized on postoperative day 7; samples were obtained from the peritoneal tissue surrounding the cecum, and the rats were sacrificed. Results: In group 3, there was a statistically significant difference in terms of inflammation, lymph node size, and free oxygen radicals; these parameters tended to increase. In terms of fibrosis evaluated using H&E and MT, there was no significant difference between groups 2 and 3. Conclusions: No positive outcomes indicating that pycnogenol reduces intra-abdominal adhesions were obtained. However, it caused severe inflammation in the tissue. Moreover, a significant increase in lymph node size was detected secondary to inflammation. Additionally, in immunohistochemical analyses conducted to detect oxidative stress, pycnogenol increased the production of free oxygen radicals in the tissue.
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- 2018
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9. 2/ LGBTQ+ necropolitics
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Varpu Alasuutari, Stephenson Brooks Whitestone, Laura Goret Hansen, Katrina Jaworski, Olga Doletskaya, and Jun Zubillaga-Pow
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thanatology ,death studies ,queer studies ,suicide ,grief ,Philosophy (General) ,B1-5802 ,Sociology (General) ,HM401-1281 ,Social sciences (General) ,H1-99 - Abstract
This is part 2 of 6 of the dossier What do we talk about when we talk about queer death?, edited by M. Petricola. The contributions collected in this article sit at the crossroads between thanatology, gender studies, and LGBT+ studies and tackle questions such as: how can queer death studies problematise heteronormative/cisnormative constructions of dying, death, and mourning? How can queer death studies approach the post-mortem manipulation of transgender identities? How can this discipline change the current cultural perception of the link between queerness and suicide? The present article includes the following contributions: – Alasuutari, V., Queering the heteronormative and cisnormative lifeworld of death; – Whitestone S., Queering as identity preservation: transgender identity after death; – Goret Hansen L., When i talk about queer death, I talk about trans-necropolitics and suicide prevention; – Jaworski K., Notes towards rethinking the agency of queer youth suicide; – Doletskaya O., Queer death and victimhood in Russia: ‘westernised queer activism’; – Zubillaga-Pow J., Lesbian Liebestod: sapphic suicide in chinese society.
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- 2021
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10. A Comparison of Breast-Conserving Surgery and Subcutaneous Mastectomy with Implant Reconstruction in Terms of Postoperative Quality of Life in Patients with Breast Cancer
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Abdülkadir Deniz, Kenan Çetin, Hasan Ediz Sıkar, Nuri Emrah Goret, and Hasan Kucuk
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breast ,breast conserving surgery ,cancer ,implant ,mastectomy ,quality of life ,reconstruction ,subcutaneous mastectomy. ,Medicine - Abstract
INTRODUCTION[|]The aim of this study was to compare the effects of breast-conserving surgery (BCS) and subcutaneous mastectomy with implant reconstruction (SMIR) in terms of postoperative psychosocial effects, sexuality, and quality of life.[¤]METHODS[|]Demographic data and clinical breast cancer parameters of patients who underwent BCS (n=48) or SMIR (n=27) between January 2012 and December 2016 were reviewed retrospectively. The data were collected via face-to-face interview using the European Organization for Research and Treatment of Cancer Quality of Life Questionnaire (EORTC QLQ-C30) and the breast cancer-specific submodule, EORTC QLQ-BR23.[¤]RESULTS[|]In this study group, 23 (48%) patients who underwent BCS and 25 (92.6%) patients who underwent SMIR were premenopausal (p0.05). Fatigue scores on the QLQ-C30 were greater for SMIR patients, as well as arm symptoms in the QLQ-BR23 side effects scale (p
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- 2019
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11. Pneumonia-Specific Escherichia coli with Distinct Phylogenetic and Virulence Profiles, France, 2012–2014
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Béatrice La Combe, Olivier Clermont, Jonathan Messika, Matthieu Eveillard, Achille Kouatchet, Sigismond Lasocki, Stéphane Corvec, Karim Lakhal, Typhaine Billard-Pomares, Romain Fernandes, Laurence Armand-Lefevre, Sandra Bourdon, Jean Reignier, Vincent Fihman, Nicolas de Prost, Julien Bador, Julien Goret, Frederic Wallet, Erick Denamur, and Jean-Damien Ricard
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Nosocomial infection ,ventilator-associated pneumonia ,Escherichia coli ,virulence factors ,antimicrobial resistance ,bacteria ,Medicine ,Infectious and parasitic diseases ,RC109-216 - Abstract
In a prospective, nationwide study in France of Escherichia coli responsible for pneumonia in patients receiving mechanical ventilation, we determined E. coli antimicrobial susceptibility, phylotype, O-type, and virulence factor gene content. We compared 260 isolates with those of 2 published collections containing commensal and bacteremia isolates. The preponderant phylogenetic group was B2 (59.6%), and the predominant sequence type complex (STc) was STc73. STc127 and STc141 were overrepresented and STc95 underrepresented in pneumonia isolates compared with bacteremia isolates. Pneumonia isolates carried higher proportions of virulence genes sfa/foc, papGIII, hlyC, cnf1, and iroN compared with bacteremia isolates. Virulence factor gene content and antimicrobial drug resistance were higher in pneumonia than in commensal isolates. Genomic and phylogenetic characteristics of E. coli pneumonia isolates from critically ill patients indicate that they belong to the extraintestinal pathogenic E. coli pathovar but have distinguishable lung-specific traits.
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- 2019
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12. The Urban Climate Services URCLIM projectImage 1
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Valéry Masson, Erwan Bocher, Bénédicte Bucher, Zenaida Chitu, Sidonie Christophe, Carl Fortelius, Rafiq Hamdi, Aude Lemonsu, Adriaan Perrels, Bert Van Schaeybroeck, Ben Wichers Schreur, Liliana Velea, Yasmina Beddar, Jean-Christophe Calvet, Andy Delcloo, Arsène Druel, François Duchêne, Guillaume Dumas, Alexandru Dumitrescu, Jacques Gautier, Marine Goret, Matti Horttanainen, Rostislav Kouznetsov, Arnaud Le Bris, Shirley Lecorre, Benjamin Le Roy, Yuliia Palamarchuk, Gwendall Petit, Reija Ruuhela, Olli Saranko, Mikhail Sofiev, Pilvi Siljamo, Hans Van de Vyver, Peter van Velthoven, and Athanasios Votsis
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Meteorology. Climatology ,QC851-999 ,Social sciences (General) ,H1-99 - Published
- 2020
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13. Quality assurance in allergy diagnosis: position statement of the French society AllergoBioNet
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Julien Goret, Anne Sarrat, Lorna Garnier, Angélique Grenier, and Joana Vitte
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Immunologic diseases. Allergy ,RC581-607 - Published
- 2020
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14. Les déchets d’os et de bois de cerf
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Jean-François Goret and Isabelle Rodet-Belarbi
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Archaeology ,CC1-960 - Published
- 2018
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15. Impact of the introduction of a nucleic acid amplification test for Clostridium difficile diagnosis on stool rejection policies
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J. Goret, J. Blanchi, P. Floch, O. Peuchant, D. Chrisment, R. Sanchez, H. Biessy, R. Lemarié, D. Leyssene, B. Loutfi, S. Mimouni, T. Flao, C. Bébéar, and F. Mégraud
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C. difficile ,Diagnosis ,Impact ,Molecular ,Algorithm ,NAAT ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Abstract Background The change from non-molecular to nucleic acid amplification tests (NAATs) is known to increase the detection of Clostridium difficile infection (CDI); however, the impact on stool rejection policies in clinical laboratories is unclear. The current guidelines have reinforced the importance of respecting strict conditions for performing tests on stool samples for CDI diagnosis. The purpose of this study was to estimate whether the implementation of molecular tests has resulted in changes in stool rejection policies between clinical laboratories that introduced NAATs and those that did not. Results A survey was conducted to evaluate the change in the number of stool samples rejected and the rejection criteria among 12 hospital laboratories in southwestern France before and after the switch from non-molecular tests to NAATs using retrospective data from June 1 till September 30, 2013 and the same period 2014. Four laboratories introduced NAATs as a second or third step in the process. A total of 1378 and 1297 stools samples were collected in 2013 and 2014, respectively. The mean number of rejected stool samples significantly increased (p
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- 2018
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16. Inclusion of CO2 flux modelling in an urban canopy layer model and an evaluation over an old European city centre
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Marine Goret, Valéry Masson, Robert Schoetter, and Marie-Pierre Moine
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Environmental pollution ,TD172-193.5 ,Meteorology. Climatology ,QC851-999 - Abstract
In the context of climate change, the reduction of greenhouse gas emissions is a global concern. Recent publications estimate that 30–40% of total anthropogenic greenhouse gases are directly emitted by urban areas. This paper focuses on CO2, which is the main anthropogenic greenhouse gas, and presents an implementation of CO2 flux modelling in urban areas within the urban canopy model Town Energy Balance (TEB). Highly weather-dependent contributors to CO2 fluxes (buildings and vegetation) are explicitly modelled by TEB using the Building Energy Model (BEM) for buildings and Interactions between Soil, Biosphere and Atmosphere (ISBA) for urban vegetation. This approach allows the impacts of the urban microclimate on CO2 fluxes to be simulated. Non-weather-dependent contributors (traffic and human respiration) are simulated using simpler approaches. A sensitivity study applied to the centre of Toulouse, France, highlights the relevance of detailed input data related to traffic, building use and human behaviour to simulate accurate CO2 fluxes. The results show that traffic (48.5%) and buildings (42%) are the main contributors to the annual mean CO2 flux. A comparison of the model results with independent eddy-covariance flux data shows good agreement with a root mean square error of 15.3 μmol m−2 s−1 and demonstrates that the model is able to reproduce seasonally averaged daily cycles of CO2 fluxes. In future studies, this model can be used to quantify the impacts on CO2 fluxes of different urban development scenarios such as urban expansion, changes in urban form, changes in practices related to the heating of buildings or urban greening strategies. Keywords: CO2fluxes, Eddy covariance, Cities, Urban canopy layer model, Model evaluation
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- 2019
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17. Decreased susceptibility to chlorhexidine affects a quarter of Escherichia coli isolates responsible for pneumonia in ICU patients
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La Combe, Béatrice, Bleibtreu, Alexandre, Messika, Jonathan, Fernandes, Romain, Clermont, Olivier, Branger, Catherine, Billard-Pomares, Typhaine, Barnaud, Guilène, Magdoud, Fatma, Eveillard, Matthieu, Kouatchet, Achille, Lasocki, Sigismond, Asfar, Pierre, Corvec, Stéphane, Lakhal, Karim, Armand-Lefevre, Laurence, Wolff, Michel, Timsit, Jean-François, Bourdon, Sandrine, Reignier, Jean, Martin, Stéphanie, Fihman, Vincent, de Prost, Nicolas, Bador, Julien, Charles, Pierre-Emmanuel, Goret, Julien, Boyer, Alexandre, Wallet, Frederic, Jaillette, Emmanuelle, Nseir, Saad, Landraud, Luce, Ruimy, Raymond, Danin, Pierre-Eric, Dellamonica, Jean, Cremniter, Julie, Frat, Jean-Pierre, Jauréguy, Françoise, Clec’h, Christophe, Decré, Dominique, Maury, Eric, Dreyfuss, Didier, Denamur, Erick, and Ricard, Jean-Damien
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- 2018
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18. Opportunistic Pulmonary Bordetella hinzii Infection after Avian Exposure
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Aude Fabre, Clarisse Dupin, François Bénézit, Julien Goret, Caroline Piau, Stéphane Jouneau, Sophie Guillot, Francis Mégraud, Samer Kayal, Benoit Desrues, Alain Le Coustumier, and Nicole Guiso
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Bordetella hinzii ,opportunistic pulmonary infection ,avian exposure ,persistence ,bacteria ,France ,Medicine ,Infectious and parasitic diseases ,RC109-216 - Abstract
We report 2 cases of pulmonary Bordetella hinzii infection in immunodeficient patients. One of these rare cases demonstrated the potential transmission of the bacteria from an avian reservoir through occupational exposure and its persistence in humans. We establish bacteriologic management of these infections and suggest therapeutic options if needed.
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- 2015
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19. Short- and Long-term Influence of Litter Quality and Quantity on Simulated Heterotrophic Soil Respiration in a Lowland Tropical Forest
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Bréchet, Laëtitia, Le Dantec, Valérie, Ponton, Stéphane, Goret, Jean-Yves, Sayer, Emma, Bonal, Damien, Freycon, Vincent, Roy, Jacques, and Epron, Daniel
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- 2017
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20. A giant chorioangioma of the placenta with favorable outcome: a rare case presentation with literature review
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Fatma Beyazit, Ceren Canbey Goret, Eren Pek, and Meryem Gencer
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pregnancy ,placenta ,chorioangoma ,Medicine - Abstract
Chorioangioma, or hemangioma of the placenta, is the most frequent non-trophoblastic tumor of the placenta consisting of blood vessels and stroma. A great proportion of these tumors are small and well delineated within the placental parenchyma and have no or minimal adverse impact on the fetus. Unfortunately, large tumor size is linked to serious complications such as fetal anemia, hydrops and intrauterine death. This is probably because of arteriovenous shunts leading to progressive heart failure of the fetus. With the increasing rates of antenatal screenings with ultrasonography, prenatal diagnosis of these tumors is widely achieved. Here we report a case of giant placental chorioangioma diagnosed in the second trimester of pregnancy. The size of the tumor minimally increased during follow-up and at term, uncomplicated labor was achieved. Macroscopic and histologic examination confirmed the diagnosis. [Med-Science 2016; 5(4.000): 1037-9]
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- 2016
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21. Prevalence and pathogenicity of binary toxin–positive Clostridium difficile strains that do not produce toxins A and B
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C. Eckert, A. Emirian, A. Le Monnier, L. Cathala, H. De Montclos, J. Goret, P. Berger, A. Petit, A. De Chevigny, H. Jean-Pierre, B. Nebbad, S. Camiade, R. Meckenstock, V. Lalande, H. Marchandin, and F. Barbut
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A−B−CDT+ strains ,binary toxin ,diagnostic ,PCR ribotype 033 ,toxinotype XI ,Clostridium difficileI ,Infectious and parasitic diseases ,RC109-216 - Abstract
Clostridium difficile causes antibiotic-associated diarrhoea and pseudomembranous colitis. The main virulence factors of C. difficile are the toxins A (TcdA) and B (TcdB). A third toxin, called binary toxin (CDT), can be detected in 17% to 23% of strains, but its role in human disease has not been clearly defined. We report six independent cases of patients with diarrhoea suspected of having C. difficile infection due to strains from toxinotype XI/PCR ribotype 033 or 033-like, an unusual toxinotype/PCR ribotype positive for CDT but negative for TcdA and TcdB. Four patients were considered truly infected by clinicians and were specifically treated with oral metronidazole. One of the cases was identified during a prevalence study of A−B−CDT+ strains. In this study, we screened a French collection of 220 nontoxigenic strains and found only one (0.5%) toxinotype XI/PCR ribotype 033 or 033-like strain. The description of such strains raises the question of the role of binary toxin as a virulence factor and could have implications for laboratory diagnostics that currently rarely include testing for binary toxin.
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- 2015
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22. Les sous-classes d'IgG dans le LCR présentent-elles un réel intérêt ?
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Martinroche, Guillaume, Charpy, Juliette, and Goret, Julien
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Le dosage des IgG totales sur sérum est un examen courant de biologie médicale. Plus spécialisé, le dosage des sous- classes d'IgG sur sérum trouve sa place en deuxième ligne lors d'un bilan de déficit immunitaire ou pour la maladie associée aux IgG4 (MAG4). Dans le liquide céphalorachidien, leur évaluation permet la distinction entre un transsudat et une synthèse intrathécale. Concernant les sous-classes d'IgG dans le LCR, les laboratoires de biologie médicale commencent à recevoir des demandes, afin de mettre en évidence la présence d'IgG4. Dans le LCR elles seraient liées à la pachyméningite hypertrophique associée à la MAG4 mais, en l'absence d'étude clinique de grande envergure, leur dosage ne semble être pertinent que lorsque la biopsie tissulaire est impossible. La technique de dosage validée sur sérum est quantitative en milieu liquide (néphélémétrie/turbidimétrie). L'utilisation de ces techniques sur LCR doit être validée par chaque laboratoire, en l'absence de validation des kits sur LCR. Cette revue actualisée de la littérature revient sur les différentes indications des dosages d'IgG et des sous-classes d'IgG sur sérum, sur l'intérêt du dosage des sous- classes d'IgG sur le LCR et les techniques associées. Serum total IgG measurement is a common lab act in medical biology. More specialized, serum IgG subclasses measurement plays a key role in IgG4-Re- lated Disease but is also useful for second-line diagnosis in humoral immune deficiencies. In the cerebrospinal fluid (CSF), an index is used as an indicator of the relative amount of CSF IgG compared to serum. Any increase in the index reflects IgG production in the central nervous system. Regarding IgG subclasses in the CSF, medical laboratories are now getting demands, actually to find out if there is any IgG4 subclass. These IgG4 in CSF could be associated with IgG4-related hypertrophic pachymeningitis but without appropriate studies corroborating this, their measurement should be done only when tissue biopsy cannot be performed. Quantitative measurement on serum is validated with nephelometry and turbidimetry assays. Each laboratory has to validate the assays on CSF before giving results. In this mini review, we present the indications of total IgG and IgG subclasses on serum as well as the benefit of IgG subclasses in CSF and the techniques available in a medical laboratory. [ABSTRACT FROM AUTHOR]
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- 2023
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23. Impact of the introduction of a nucleic acid amplification test for Clostridium difficile diagnosis on stool rejection policies
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Goret, J., Blanchi, J., Floch, P., Peuchant, O., Chrisment, D., Sanchez, R., Biessy, H., Lemarié, R., Leyssene, D., Loutfi, B., Mimouni, S., Flao, T., Bébéar, C., and Mégraud, F.
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- 2018
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24. État des connaissances et besoins en formation en biologie de l'allergie : enquête du Groupe de Travail Biologie de l'Allergie de la Société française d'allergologie à l'intention des jeunes allergologues.
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Goret, J., Sève, E., and Klingebiel, C.
- Abstract
La biologie est un outil incontournable dans le diagnostic et la prise en charge des patients allergiques. L'apprentissage à l'interprétation d'un bilan biologique est essentiel pour le praticien. En raison de la diversité des cursus, les jeunes allergologues n'ont pas tous la même formation. À la demande du Conseil Scientifique de la Société française d'allergologie (SFA), le Groupe de Travail Biologie de l'Allergie a réalisé une enquête auprès des jeunes allergologues afin d'évaluer leur niveau de formation en biologie de l'allergie et de connaître leurs attentes en termes de formation continue. Au total, 162 allergologues ont été contactés et 36 ont répondu. Les répondants étaient majoritairement des femmes (78 %), allergologues exclusifs (83 %) et 69 % étaient issus du DES d'Allergologie. La moitié estimait avoir eu une formation suffisante en biologie de l'allergie et 50 % ont effectué un stage dans un laboratoire de biologie médicale. Soixante-trois pour cent se considéraient comme compétents pour l'interprétation des bilans. Pour leur formation continue, ils utilisaient les sites internet des sociétés savantes, les revues scientifiques et des webinaires qu'ils jugeaient satisfaisants. Aucune personne n'avait recours à un système d'évaluation des compétences. Plus de 95 % des répondants sont en faveur d'une mise à disposition de documents synthétiques de référence et tous les consulteraient s'ils étaient accessibles en ligne sur le site de la SFA. En conclusion, la formation des jeunes allergologues sur la biologie de l'allergie a besoin d'être complétée et harmonisée, sur le plan théorique et pratique. Plusieurs outils pédagogiques sont plébiscités pour le maintien des compétences. Blood tests are an essential tool for the diagnosis and management of allergy. Learning how to interpret test results is therefore essential for the physician. Due to the diversity of their education, young allergists do not all have the same training. At the request of the French Society of Allergology (SFA) Scientific Committee, the In vitro Diagnosis Working Group carried out a survey for young allergists in order to evaluate their level of initial training in allergy in vitro diagnosis and to know their expectations in terms of continuing medical education. A total of 162 allergists were consulted and 36 responded. Half of them considered that they had sufficient training in allergy in vitro diagnosis and 50% considered themselves competent in the interpretation of tests. For their continuing medical education, they use the websites of learned societies (SFA, EEACI), scientific journals and webinars and consider them satisfactory or very satisfactory. More than 95% of them are in favour of the online availability of summary sheets or reference documents in in vitro diagnosis, and all of them would consult these tools if they were accessible on the SFA website. In conclusion, the training of young allergists in allergy blood tests needs to be completed and standardised, both theoretically and practically. Several educational tools are available and popular to achieve this and help them to keep valuable skills up to date. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
25. NOVEOS and ImmunoCAP Have Similar Performances for Diagnosing Food Allergies
- Author
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Trouche-Estival, Benjamin, Vitte, Joana, Martin-Blondel, Audrey, Michelet, Marine, Gruzelle, Vianney, Didier, Alain, Guilleminault, Laurent, Mailhol, Claire, Rivera, Silvia Martinez, De Lima Correia, Anaïs, Taurus, Camille, Blancher, Antoine, Goret, Julien, Klingebiel, Caroline, and Apoil, Pol André
- Abstract
The clinical significance of newly available platforms for specific IgE measurement must be evaluated. However, data are lacking for NOVEOS (Hycor), especially for food allergens.
- Published
- 2024
- Full Text
- View/download PDF
26. Effect of Local Anesthesia on Pain During Arterial Puncture: The GAEL Randomized Placebo-Controlled Trial.
- Author
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Beaumont, Marc, Goret, Marion, Orione, Charles, Fauche, Alexandre, Nowak, Emmanel, Dion, Angelina, Darnois, Veronique, Tromeur, Cecile, Cogulet, Virginie, Leroyer, Christophe, Couturaud, Francis, and Le Mao, Raphael
- Subjects
STATISTICS ,PAIN ,CONFIDENCE intervals ,LOCAL anesthesia ,ARTERIAL puncture ,TREATMENT effectiveness ,RANDOMIZED controlled trials ,BLIND experiment ,DESCRIPTIVE statistics ,STATISTICAL sampling ,DATA analysis ,DATA analysis software ,PAIN management - Abstract
BACKGROUND: Arterial puncture is often painful for patients. The aim of this study was to compare use of local anesthesia as a eutectic mixture of 2 local anesthetics, lidocaine and prilocaine, versus placebo. METHODS: We conducted a double-blind, randomized controlled trial. Subjects were eligible if arterial puncture was indicated. The primary outcome was an experienced pain > 2 on a numerical pain rating scale. As having had a previous experience of arterial puncture was expected to be predictive of the current response, we planned 3 comparisons between use of local anesthesia and placebo: in the whole sample, among subjects with a painful previous experience, and among subjects with a painless previous experience. Multiple testing was analyzed using the Bonferroni correction for the primary outcome. The secondary outcome was the numerical pain rating scale score itself. All analyses were performed on an intention-to-treat basis. RESULTS: A total of 136 subjects were included in this study. The primary outcome occurred in 20.9% in the active arm versus 37.7% in the placebo arm in the whole sample (relative risk 0.55; 95% CI when adjusting for multiple testing ranged was 0.28-1.09, P = .10; 95% CI without adjustment was 0.32-0.97, P = .038). No significant heterogeneity in the study treatment effect was found when considering previous painful or painless arterial puncture (P = .70). The numerical pain rating scale score was 1.55 6 2.03 in active group versus 2.09 « 2.15 in the placebo group (P = .13). CONCLUSIONS: We found that application of a eutectic mixture reduced the number of painful arterial punctures by 50% compared with placebo. However, this result was not statistically significant. (ClinicalTrials.gov registration NCT01964248.) [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
27. Développement et évaluation d'approches algorithmiques et par GAN pour la génération de données synthétiques en Allergologie.
- Author
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Corriger, J. and Goret, J.
- Abstract
Copyright of Revue Francaise d'Allergologie is the property of Elsevier B.V. and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2024
- Full Text
- View/download PDF
28. Allergie versus parasitose : du concept de réponse immunitaire de type 2 à la pratique.
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Charpy, J., Klingebiel, C., Dubois, M., Michel, M., Apoil, P.-A., and Goret, J.
- Published
- 2024
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- View/download PDF
29. Mice with muscle-specific deletion of Bin1recapitulate centronuclear myopathy and acute downregulation of dynamin 2 improves their phenotypes
- Author
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Silva-Rojas, Roberto, Nattarayan, Vasugi, Jaque-Fernandez, Francisco, Gomez-Oca, Raquel, Menuet, Alexia, Reiss, David, Goret, Marie, Messaddeq, Nadia, Lionello, Valentina M., Kretz, Christine, Cowling, Belinda S., Jacquemond, Vincent, and Laporte, Jocelyn
- Abstract
Mutations in the BIN1(Bridging Interactor 1) gene, encoding the membrane remodeling protein amphiphysin 2, cause centronuclear myopathy (CNM) associated with severe muscle weakness and myofiber disorganization and hypotrophy. There is no available therapy, and the validation of therapeutic proof of concept is impaired by the lack of a faithful and easy-to-handle mammalian model. Here, we generated and characterized the Bin1mck−/−mouse through Bin1knockout in skeletal muscle. Bin1mck−/−mice were viable, unlike the constitutive Bin1knockout, and displayed decreased muscle force and most histological hallmarks of CNM, including myofiber hypotrophy and intracellular disorganization. Notably, Bin1mck−/−myofibers presented strong defects in mitochondria and T-tubule networks associated with deficient calcium homeostasis and excitation-contraction coupling at the triads, potentially representing the main pathomechanisms. Systemic injection of antisense oligonucleotides (ASOs) targeting Dnm2(Dynamin 2), which codes for dynamin 2, a BIN1 binding partner regulating membrane fission and mutated in other forms of CNM, improved muscle force and normalized the histological Bin1mck−/−phenotypes within 5 weeks. Overall, we generated a faithful mammalian model for CNM linked to BIN1defects and validated Dnm2ASOs as a first translatable approach to efficiently treat BIN1-CNM.
- Published
- 2022
- Full Text
- View/download PDF
30. Attrapez-les toutes ! Point sur les IgG et leurs sous-classes.
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Martinroche, Guillaume, Sarrat, Anne, and Goret, Julien
- Abstract
Les dosages d'IgG et de leurs sous-classes sont des examens courants de biologie médicale. Les IgG sériques totales trouvent leur place en première intention dans les diagnostics des déficits immunitaires primitifs ; mais aussi dans leur suivi et celui des traitements par immunoglobulines polyvalentes. Pour les sous-classes d'IgG sériques, elles sont recommandées en deuxième ligne ou pour la maladie associée aux IgG4. Dans le liquide céphalorachidien, l'intérêt porte aujourd'hui sur les IgG qui permettent la distinction entre un transsudat et une synthèse intrathécale. La technique de dosage est quantitative en milieu liquide (néphélémétrie/turbidimétrie). Parmi les difficultés rencontrées, nous retrouvons l'absence de standard international pour les réactifs des sous-classes d'IgG, les discordances entre le dosage des IgG totales et celui des sous-classes dosées individuellement et la mauvaise évaluation des concentrations des IgG4. Dans cette revue actualisée de la littérature nous revenons sur ces difficultés mais aussi sur les améliorations proposées par les fournisseurs. Nous apportons également quelques pistes sur d'autres améliorations encore possibles pour pallier les difficultés qui persistent. Total IgG and IgG subclasses measurements are common lab acts in medical biology. The main indications are primary immunodeficiency's diagnosis and follow-up treatment with multivalent immunoglobulins. IgG subclass measurement plays a key role in IgG4-Related Disease but is also useful for second-line diagnosis in humoral immune deficiencies. In the cerebrospinal fluid, an index is used as an indicator of the relative amount of CSF IgG compared to serum. Any increase in the index is a reflection of IgG production in the central nervous system. There is no reference material allowing standardization of IgG subclass assays, discrepancies between total IgG and sum of IgG subclasses are quite frequent and IgG4 seem to be underestimated and lead to cross reactivity. In this review, we show that the manufacturers along the difficulties encountered during lab routine have made some improvements. In addition, we are making some suggestions for further improvements that can be done to reduce the difficulties that remain. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
31. Diagnostic de l'hypersensibilité retardée : des mécanismes immunologiques aux tests de diagnostic in vivo et in vitro.
- Author
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Serrier, Julien, Charpy, Juliette, Cravat, Maxime, Le Mauff, Brigitte, Leon, Anthony, Goret, Julien, and AllergoBioNet
- Abstract
Les réactions d'hypersensibilité retardée (HSR) sont définies comme celles qui surviennent plus de six heures après une exposition aux allergènes et font intervenir l'immunité à médiation cellulaire. La peau est l'organe le plus souvent atteint dans les HSR aux produits naturels ou de synthèse ainsi qu'aux médicaments. La plupart des éruptions cutanées sont bénignes et spontanément résolutives, mais certaines sont graves, entraînant un risque élevé de morbidité et de mortalité. Elles doivent être reconnues tôt et gérées rapidement. La démarche diagnostique repose sur une anamnèse exhaustive, des tests in vivo tels que l'intradermoréaction retardée, le patch-test ou le test de provocation orale et des tests biologiques in vitro explorant l'activité de lymphocytes T spécifiques. Les performances de ces tests varient selon les manifestations cliniques. Les avancées concernant l'immunopathogenèse ont permis d'identifier des allèles HLA associés aux manifestations cliniques et ainsi de déterminer des facteurs de prédisposition. Cet article décrit les caractéristiques et la place actuelle de ces tests selon les phénotypes d'HSR. Delayed hypersensitivity reactions (DHR) are defined as reactions that occur more than 6 hours after exposure to small reactive molecules or drugs. The skin is the most often affected organ. Potentially life-threatening severe cutaneous adverse reactions (SCAR) are associated with a high risk of morbidity and mortality. They should be recognized and managed early by clinicians. The diagnostic workup is based on a precise anamnesis, a history of past events, in vivo tests such as delayed intradermal testing, patch-test or oral challenge and in vitro biological tests exploring the specific lymphocyte activity. Advances in understanding the delayed T cell–mediated reactions lead to identification of predisposing of HLA alleles. We describe the performance of these tests regarding the HSR phenotypes. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
32. Performance comparison between Phadiatop and Sx01 multi-allergen tests for airborne allergy diagnosis.
- Author
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Seydoux, Mathilde, Charpy, Juliette, Jouzeau, Arc'Hantael, Domingues, Rafael, Kharat, Morteza, Lemarinel, Christophe, and Goret, Julien
- Published
- 2024
- Full Text
- View/download PDF
33. Comparison of Number of Passes and Cytopathological Specimen Adequacy for Thyroid Fine-Needle Aspiration Biopsy in the Absence of an On-Site Pathologist
- Author
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Kuzan, Taha Yusuf and Canbey Goret, Ceren
- Abstract
Aim:Ultrasound-guided fine-needle aspiration biopsy (FNAB) is a reliable, minimally invasive diagnostic method with high sensitivity and specificity in the evaluation of thyroid nodules. Our aim in this retrospective study was to determine if there was a difference in the adequacy ratio based on the number of needle passes in the thyroid FNABs in the absence of rapid on-site evaluation (ROSE) by the pathologist and to determine the optimal needle pass number for FNAB. Methods:Between November 2018 and February 2019, thyroid FNABs of 121 (99 female, 22 male) patients were evaluated retrospectively. Samples for each biopsy were numbered according to the order of retrieval, and 4 pairs of slides were prepared by the radiologist without on-site microscopic evaluation. Cytological results were determined according to the Bethesda classification. Results:The rate of adequacy in the first, second, third, and fourth passes were 76.0, 82.6, 77.7, and 71.2%, respectively. No statistically significant difference was found between these four groups in terms of adequacy (p= 0.21). The adequacy rates of the 1st, 1st+2nd, 1st+2nd+3rd, and cumulative evaluation of all four biopsies were 76.0, 87.6, 90.1, and 91.7%, respectively (p= 0.001). A statistically significant difference was found in the comparison of the 1st biopsy and the cumulative 1st+2nd biopsy in terms of adequacy rates (p= 0.019). However, there was no statistically significant difference between the cumulative 1st+2nd biopsy and the cumulative 1st+2nd+3rd biopsy in terms of adequacy rates (p= 0.54). Conclusions:In cases where ROSE cannot be performed, we recommend a minimum of 2 and a maximum of 3 needle entries for FNAB adequacy with the right technique and preparation.
- Published
- 2020
- Full Text
- View/download PDF
34. Studies on the Epidemiology of Equine Infection Anemia in Europe using the Gel-Precipitation Test1
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P. Goret and B. Toma
- Subjects
medicine.medical_specialty ,business.industry ,Epidemiology ,Medicine ,Precipitation ,business ,Virology ,Infection anemia - Published
- 2015
35. Tailoring Empirical Antimicrobial Therapy in Subjects With Ventilator-Associated Pneumonia With a 10-Hour E-Test Approach.
- Author
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Boyer, Alexandre, Goret, Julien, Clouzeau, Benjamin, Romen, Antoine, Prevel, Renaud, Lhomme, Edouard, Vargas, Frédéric, Hilbert, Gilles, Bébéar, Cecile, Gruson, Didier, and M'Zali, Fatima
- Subjects
ANTIBIOTICS ,ACADEMIC medical centers ,BRONCHOALVEOLAR lavage ,CULTURE media (Biology) ,INTENSIVE care units ,MICROBIAL sensitivity tests ,DESCRIPTIVE statistics ,VENTILATOR-associated pneumonia - Abstract
BACKGROUND: In a previous study of subjects suspected of having ventilator-associated pneumonia, a rapid susceptibility testing approach by using ETEST (BioMérieux) strips directly applied to bronchoalveolar lavage samples provided valuable information at hour 24. The primary objective of this study was to assess a new direct specimen testing by using an even more-rapid E-test approach (at hour 10), which could promote an early de-escalation of the antimicrobial therapy. METHODS: Twenty-eight subjects with ventilator-associated pneumonia admitted to a medical ICU were prospectively included. In parallel with standard routine methods, E-test strips were directly applied onto agar plates seeded with bronchoalveolar lavage samples and were analyzed after 10 h of incubation. E-test results were used to identify potential drug choices by simulating clinical decision making if the microscopy results had been available at the point of care. These choices were analyzed for concordance with the narrowest adequate antimicrobial therapy according to the Minimum Inhibitory Concentrations (MICs) provided by the reference method (ie, the laboratory routine diagnostic). RESULTS: At hour 10, direct specimen testing was readable in 18 of 28 bronchoalveolar lavage samples (64%). Total agreement between the 10-h direct specimen testing approach and the laboratory routine diagnostic approach was 90%, with a sensitivity of 83% and a specificity of 95%, with 8% major errors and 3% very major errors. The concordance between the 2 tests was very good (kappa = 0.79). If the 10-h E-test results were taken into account, then an early de-escalation strategy would have been possible in 10 of 18 cases (55%) at hour 10. CONCLUSIONS: This rapid susceptibility testing approach provided early (10 h) and valuable information that could lead to an early adjustment of empirical antimicrobial treatment in a ventilator-associated pneumonia setting. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
36. La coopération entre allergologues et biologistes membres du réseau AllergoBioNet : le succès d'un modèle français.
- Author
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Mariotte, D., Beauvillain, C., Garnier, L., Goret, J., Nicaise-Roland, P., Rogeau, S., Sarrat, A., Vitte, J., and Pouessel, G.
- Abstract
Le réseau AllergoBioNet est constitué de biologistes hospitaliers spécialistes des analyses contribuant au diagnostic et au suivi des maladies allergiques. Initialement constitué d'une dizaine de membres, il comporte actuellement soixante-dix-neuf biologistes français exerçant dans 29 CHU et 15 CH, ainsi qu'un biologiste belge. Parmi ces laboratoires, 10 ont été labellisés « laboratoires de biologie médicale de référence » (LBMR) du fait de leur expertise des explorations biologiques des maladies allergiques, des autres causes d'hypersensibilité, des pathologies mastocytaires et du complément. Les objectifs principaux des biologistes du réseau sont de tester et mettre en oeuvre des techniques robustes et fiables accréditées par le COFRAC, d'être un outil de formation médicale continue pour maintenir et actualiser les connaissances et compétences et de promouvoir des projets de recherche dont les résultats sont présentés dans les congrès nationaux et internationaux et sous forme d'articles publiés dans des revues spécialisées. Cet article est un appel auprès des biologistes hospitaliers à s'impliquer dans le domaine de l'allergologie via le réseau AllergoBioNet, mais aussi auprès des allergologues qui peuvent solliciter la collaboration de ces biologistes spécialisés pour répondre à leurs questions pratiques (conditions pré-analytiques, conservation des échantillons), de discuter des qualités analytiques des méthodes utilisées pour comprendre leurs limites techniques, de savoir où adresser le patient nécessitant une analyse très spécialisée et d'échanger autour de l'interprétation des résultats. Ce partenariat permet d'enrichir mutuellement les savoirs et les pratiques dans le but d'optimiser la prise en charge des patients. AllergoBioNet is a French association of clinical laboratory specialists of allergic and mast-cell-related diseases and their differential diagnoses. Its 79 members are working in clinical laboratories in 29 Universitary Hospitals and 15 General Hospitals in France and another one in Belgium. Ten of these laboratories have recently been certified as « laboratoires de biologie médicale de référence » (Reference Clinical Laboratories, LBMR) to valorize the expertise in hypersensitivity, mast-cell and complement laboratory investigations. The first mission of these laboratory professionals is to ensure that results are accurate and reliable. Thus, they deal with all the process of continuous quality improvement and are able to minimize errors of the sample's workflow (pre-analytic, analytic and post-analytic phases). Since years, they are certified by the French Organization for Quality (COFRAC). Moreover, they evaluate newer diagnostic tests, ensure continuous medical formation to actualize competences and knowledge, participate in research protocols and publish in national and international specialized reviews. The aims of this article are (1) to encourage all medical laboratory specialists working in the field of allergic diseases (diagnosis, monitoring patients and responses to therapy) to join the AllergoBioNet network; (2) to encourage physicians to collaborate with these laboratory professionals, so that they could answer to practical questions (ie: pre-analytical needs and conservation samples), receive updates for state-of-the-art laboratory methods and devices, refer patients needing highly specialized analyses and ensure interdisciplinary interpretation of clinical and laboratory results. This partnership should improve mutual competences and contribute to patient care. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
37. Besoins en formations et informations en biologie de l'allergie : résultats de l'enquête SFA/ANAFORCAL.
- Author
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Sève, E., Goret, J., Court-Devilliers, S., Léquipé, J., and Klingebiel, C.
- Abstract
La biologie est un outil incontournable dans le diagnostic et la prise en charge des patients allergiques. Pour compléter l'enquête auprès des jeunes allergologues publiée en 2022, le Groupe de travail biologie de l'Allergie (GTBA) en partenariat avec l'ANAFORCAL a réalisé une nouvelle enquête auprès des allergologues seniors afin d'évaluer leur formation en biologie de l'allergie et de connaître leurs attentes en termes d'information et formation continue. Au total, 1092 allergologues ont été contactés (avec des doublons entre les deux listes) et 219 ont répondu. Les allergologues s'estiment être bien formés. Plus de 70 % estiment avoir de bonnes connaissances sur le sujet et 94 % se forment régulièrement sur le sujet, en congrès tout d'abord, par la lecture d'articles scientifiques puis en réunions de formation locales. Sur cet échantillon, 69,4 % ont lu les recommandations sur la biologie de l'allergie publiées en 2021. Parmi ceux qui l'ont lu, 90 % en sont satisfaits. Cependant sur cet échantillon, 89 % n'ont jamais fait de stage dans un laboratoire d'immunoallergologie pendant leurs études. Cette enquête rapporte que 95 % des répondants veulent plus de formation et information, à propos des nouveaux allergènes moléculaires, puis de l'exploration des angiœdèmes bradykiniques, des puces à allergènes, à propos de la tryptase et enfin pour le suivi de l'immunothérapie allergénique (ITA). Ces thématiques sont souhaitées en formation DPC en ligne, au congrès francophone d'allergologie (CFA), ou sous forme de fiches sur le site de la Société française d'allergologie (SFA). Biology is an essential tool in the diagnosis and management of allergic patients. To complete the survey of young allergists published in 2022, the Allergy Biology Working Group (GTBA) in partnership with ANAFORCAL has carried out a new survey of senior allergists to assess their training in allergy biology and to know their expectations in terms of information and continuing education. A total of 1095 allergists were contacted (with duplicates between the two lists) and 219 responded. Allergists consider themselves to be well trained. More than 70% believe they have a good knowledge of the subject and 94% receive regular training on the subject, first at congresses, by reading scientific articles and then at local training meetings. Of this sample, 69.4% have read the recommendations on the biology of allergy published in 2021. Of those who have read it, 90% are satisfied with it. However, of this sample, 89% had never done an internship in an immuno-allergology laboratory during their studies. This survey reports that 95% of respondents want more training and information, about new Activé par Editorial Manager® and ProduXion Manager® about Aries Systems Corporation molecular allergens, then the exploration of bradykine angioedema, allergen chips, about tryptase and finally for the follow-up of immunotherapy allergen (ITA). These themes are desired in online CPD training, at the French-speaking congress of allergology (CFA), or in the form of sheets on the site of the French Society of Allergology (SFA). [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
38. Et si c’était un choc à la Bétadine® ?
- Author
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Barbier, O., Goret, J., Bordes, M., Pellerin, C., and Guez, S.
- Abstract
Les principaux agents responsables des réactions anaphylactiques peropératoires sont bien connus. Cependant lorsque le bilan allergologique initial est négatif, des explorations complémentaires doivent être réalisées afin d’identifier un nouvel allergène potentiel comme les antiseptiques. Nous présentons un cas de choc anaphylactique peropératoire rapporté à la Bétadine®.
- Published
- 2021
- Full Text
- View/download PDF
39. Recommandations d'AllergoBioNet pour les critères de performance des dosages d'IgE et de la tryptase.
- Author
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Goret, Julien, Couderc, Rémy, Garnier, Lorna, Grenier, Angélique, Vitte, Joana, Sarrat, Anne, and AllergoBioNet, pour le réseau
- Abstract
La vérification d'une méthode de dosage selon la norme NF/EN/ISO 15189 requiert l'analyse des performances de la technique (répétabilité, fidélité intermédiaire, exactitude et incertitude de mesure) avant toute utilisation en routine. Les coefficients de variation (CV) des résultats de précision intra-essai et inter-essais obtenus doivent être comparés à ceux des pairs et à ceux qui pratiquent ces mêmes dosages quelle que soit la technique. En l'absence de publications nationales ou internationales pour les IgE spécifiques et la tryptase, le réseau des biologistes des centres hospitaliers AllergoBioNet a analysé les résultats fournis par 24 centres pour proposer des limites acceptables des critères de performance pour le dosage des IgE totales et spécifiques et de la tryptase. Checking a dosing method according to NF/EN/ISO 15189 standard requires analysis of the performance of the technique (repeatability, intermediate fidelity, accuracy and measurement uncertainty) before routine use and follow-up annually. The coefficients of variation (CV) of the intra-assay and inter-assays accuracy results obtained must be compared with those of peers and those who perform the same determination regardless of the technique. In the absence of national or international guidelines for monitoring the performance of specific IgE and tryptase assay, the French network of hospital laboratories AllergoBioNet analysed the results provided by 24 centers and propose recommendations for total IgE, specific IgE and tryptase assays. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
40. MDANSE: An Interactive Analysis Environment for Molecular Dynamics Simulations.
- Author
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Goret, G., Aoun, B., and Pellegrini, E.
- Published
- 2017
- Full Text
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41. Tryptase sérique basale : établissement de valeurs de référence dans une étude nationale française de 2022.
- Author
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Vial-Dupuy, A., Bouz, C., Sève, E., Mathieu, P., Michel, M., Goret, J., Apoil, P.A., Vitte, J., and Klingebiel, C.
- Abstract
Copyright of Revue Francaise d'Allergologie is the property of Elsevier B.V. and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2023
- Full Text
- View/download PDF
42. Les fiches de synthèse du GTBA en ligne, un accès facile à l'information, plébiscité par les allergologues.
- Author
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Lozes, E., Klingebiel, C., Goret, J., and Sève, E.
- Abstract
Copyright of Revue Francaise d'Allergologie is the property of Elsevier B.V. and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2023
- Full Text
- View/download PDF
43. Besoins en formations et informations en biologie de l'allergie : variations générationnelles ?
- Author
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Sève, E., Goret, J., Court Devilliers, S., Lequipé, J., and Klingebiel, C.
- Abstract
Copyright of Revue Francaise d'Allergologie is the property of Elsevier B.V. and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2023
- Full Text
- View/download PDF
44. De la physiopathologie à la médecine personnalisée : IgG4, IgA et activation des basophiles pour le suivi d'efficacité d'une ITA.
- Author
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Michel, M., Lagreula, M., Charpy, J., Goret, J., Mehlal-Sedkaoui, S., Bourrain, J.-L., and Vitte, J.
- Published
- 2023
- Full Text
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45. Creating a French Dataset for artificial intelligence-assisted allergy diagnosis using semantic attributes and allergen multiplex technology.
- Author
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Martinroche, Guillaume, Goret, Julien, Apoil, Pol-André, Annesi-Maesano, Isabella, Fromentin, Eric, Guilleminault, Laurent, Caimmi, Davide, Klingebiel, Caroline, Didier, Alain, Vitte, Joana, and Demoly, Pascal
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- 2023
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46. Identification of Streptococcus sinensisfrom a patient with endocarditis using MALDI-TOF mass spectrometry, 16S rDNA- and sodA-based phylogeny
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Goret, Julien, Baudinet, Thomas, Camou, Fabrice, Issa, Nahéma, Gaillard, Prune, Wirth, Gaëtane, Greib, Carine, Barandon, Laurent, Mégraud, Francis, Bébéar, Cécile, Peuchant, Olivia, and Ménard, Armelle
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- 2019
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47. Les besoins en formation en biologie de l'allergie des jeunes allergologues.
- Author
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Goret, J., Sève, E., and Klingebiel, C.
- Abstract
Copyright of Revue Francaise d'Allergologie is the property of Elsevier B.V. and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
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- 2022
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48. A decision-making tool for restoring lowland grasslands in Europe.
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Goret, Thibaut, Janssens, Xavier, and Godefroid, Sandrine
- Subjects
SCIENTIFIC literature ,GRASSLANDS ,GRASSLAND soils ,HABITAT conservation ,DECISION trees - Abstract
Species-rich grasslands suffer from significant loss and degradation all over the world. In particular in lowland Europe, the vast majority of these habitats are in an unfavourable conservation status which requires urgent restoration measures. A significant amount of information on the results of previous restorations exists thanks to the implementation of numerous projects and the publication of action plans, technical notes and scientific articles. This information is however very scattered, which does not facilitate the work of practitioners. We therefore propose here a decision support tool using a step-wise framework informed by the successes and failures obtained in two large-scale restoration projects supplemented by scientific and grey literature. This decision tree addresses different restoration techniques depending on the local context, e.g. the intensity of habitat degradation, the richness of soil nutrients, and the presence in the vicinity of a habitat in a good conservation status. Depending on the type of grassland, our tool then suggests various recurrent management techniques to be applied after restoration. This synthetic work is presented step by step according to a dichotomous key which is intended to help practitioners make the right choices in their restoration process. [ABSTRACT FROM AUTHOR]
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- 2021
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49. Expression et activité des désoxyribonucléases DNase1 et DNase1L3 dans le sepsis
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Barthod, L., Charpy, J., Dewitte, A., Gruson, D., Mamani-matsuda, M., and Goret, J.
- Abstract
Le sepsis est défini comme une dérégulation de la réponse inflammatoire de l’hôte avec dysfonction d’organe, lors d’une infection. Lors du sepsis, les polynucléaires neutrophiles activés génèrent des pièges extracellulaires des neutrophiles (NETs). Ceux-ci sont formés d’une matrice de fibrilles extracellulaires, principalement composée d’ADN extracellulaire (ADNec). La production excessive de NETs dans l’organisme entraînent des lésions de l’endothélium et la thrombogenèse et par conséquence la défaillance d’organe. Les désoxyribonucléases 1 (DNase1) et 1L3 (DNase1L3) sont des enzymes impliquées dans la clairance de l’ADNec. Notre hypothèse est qu’un défaut qualitatif et/ou quantitatif en DNase1 et/ou DNase1L3 constituerait des facteurs de sensibilité et de mauvais pronostic du sepsis chez l’Homme. Notre objectif est de caractériser l’activité et l’expression de la DNase1 et de la DNase1L3 chez les patients atteints de choc septique.
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- 2021
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50. Effect of telemonitoring on the rate of dropout during home non-invasive ventilation: a retrospective study using a home care provider database
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Wojciech Trzepizur, Frédéric Gagnadoux, Raphael Le Mao, Christophe Gut Gobert, Joelle B Texereau, Frédérique Kremer, Marion Goret, Aurélie Chekroun Martinot, and Mathieu Rosé
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Medicine - Abstract
Objectives Telemonitoring (TM) of home non-invasive ventilation (NIV) has been shown to facilitate home/outpatient therapy set-up. However, the impact of long-term TM on therapy dropouts, compliance and leak control has not yet been clearly determined. This study evaluated whether the NIV dropout rate was reduced by TM combined with remote patient support compared with a non-telemonitoring (NTM) pathway.Design Retrospective cohort study.Setting Data were obtained from all agencies of a single home care provider in France.Participants Adults with chronic respiratory failure (n=659) who started nocturnal NIV between January 2017 and December 2019 and had ≥8 days of NIV therapy (51% male; mean age 68.5±13.8 years; 35.5% on long-term oxygen therapy) were included. The TM group included 275 patients who spent ≥80% of the follow-up using TM, and the NTM group included 384 patients who had 0 to ≤10 days of telemonitoring during follow-up.Primary and secondary outcome measures The primary outcome was the rate of NIV dropouts at 1 year (ie, treatment discontinuation, excluding deaths). Secondary outcomes included therapy compliance and leaks.Results 82 patients died during follow-up. Significantly fewer patients in the TM vs NTM group had dropped out of NIV therapy at 1 year (13% vs 34%; p4 hours/day and control of leaks.Conclusions In patients starting home NIV, TM with home care provider first-line support was associated with a lower therapy dropout rate at 1 year, and better compliance and leak control, compared with standard follow-up.
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- 2024
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