370 results on '"Loots, Gabriela G."'
Search Results
2. Simulated Microgravity Alters Gene Regulation Linked to Immunity and Cardiovascular Disease
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Tahimic, Candice GT, Steczina, Sonette, Sebastian, Aimy, Hum, Nicholas R, Abegaz, Metadel, Terada, Masahiro, Cimini, Maria, Goukassian, David A, Schreurs, Ann-Sofie, Hoban-Higgins, Tana M, Fuller, Charles A, Loots, Gabriela G, Globus, Ruth K, and Shirazi-Fard, Yasaman
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Biological Sciences ,Genetics ,Aging ,Cardiovascular ,Heart Disease ,2.1 Biological and endogenous factors ,Good Health and Well Being ,hindlimb unloading ,microgravity ,cardiovascular system ,immune response ,transcriptomics ,Animals ,Rats ,Rats ,Long-Evans ,Cardiovascular Diseases ,Hindlimb Suspension ,Weightlessness Simulation ,Gene Expression Regulation ,Oxidative Stress ,Female ,Male - Abstract
Microgravity exposure induces a cephalad fluid shift and an overall reduction in physical activity levels which can lead to cardiovascular deconditioning in the absence of countermeasures. Future spaceflight missions will expose crew to extended periods of microgravity among other stressors, the effects of which on cardiovascular health are not fully known. In this study, we determined cardiac responses to extended microgravity exposure using the rat hindlimb unloading (HU) model. We hypothesized that exposure to prolonged simulated microgravity and subsequent recovery would lead to increased oxidative damage and altered expression of genes involved in the oxidative response. To test this hypothesis, we examined hearts of male (three and nine months of age) and female (3 months of age) Long-Evans rats that underwent HU for various durations up to 90 days and reambulated up to 90 days post-HU. Results indicate sex-dependent changes in oxidative damage marker 8-hydroxydeoxyguanosine (8-OHdG) and antioxidant gene expression in left ventricular tissue. Three-month-old females displayed elevated 8-OHdG levels after 14 days of HU while age-matched males did not. In nine-month-old males, there were no differences in 8-OHdG levels between HU and normally loaded control males at any of the timepoints tested following HU. RNAseq analysis of left ventricular tissue from nine-month-old males after 14 days of HU revealed upregulation of pathways involved in pro-inflammatory signaling, immune cell activation and differential expression of genes associated with cardiovascular disease progression. Taken together, these findings provide a rationale for targeting antioxidant and immune pathways and that sex differences should be taken into account in the development of countermeasures to maintain cardiovascular health in space.
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- 2024
3. Coccidioidomycosis Osteoarticular Dissemination
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Moni, Benedicte M, Wise, Barton L, Loots, Gabriela G, and Weilhammer, Dina R
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Microbiology ,Biological Sciences ,Prevention ,Orphan Drug ,Infectious Diseases ,Vaccine Related ,Emerging Infectious Diseases ,Biodefense ,Rare Diseases ,Musculoskeletal ,Coccidioides ,arthritis ,coccidioidomycosis dissemination ,fungal osteomyelitis ,fungal synovitis ,knee joint ,skeletal infection - Abstract
Valley fever or coccidioidomycosis is a pulmonary infection caused by species of Coccidioides fungi that are endemic to California and Arizona. Skeletal coccidioidomycosis accounts for about half of disseminated infections, with the vertebral spine being the preferred site of dissemination. Most cases of skeletal coccidioidomycosis progress to bone destruction or spread to adjacent structures such as joints, tendons, and other soft tissues, causing significant pain and restricting mobility. Manifestations of such cases are usually nonspecific, making diagnosis very challenging, especially in non-endemic areas. The lack of basic knowledge and research data on the mechanisms defining susceptibility to extrapulmonary infection, especially when it involves bones and joints, prompted us to survey available clinical and animal data to establish specific research questions that remain to be investigated. In this review, we explore published literature reviews, case reports, and case series on the dissemination of coccidioidomycosis to bones and/or joints. We highlight key differential features with other conditions and opportunities for mechanistic and basic research studies that can help develop novel diagnostic, prognostic, and treatment strategies.
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- 2023
4. Engineered bone marrow as a clinically relevant ex vivo model for primary bone cancer research and drug screening
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Griffin, Katherine H, Thorpe, Steven W, Sebastian, Aimy, Hum, Nicholas R, Coonan, Thomas P, Sagheb, Isabel S, Loots, Gabriela G, Randall, R Lor, and Leach, J Kent
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Biomedical and Clinical Sciences ,Engineering ,Oncology and Carcinogenesis ,Biomedical Engineering ,Cancer ,Stem Cell Research ,Pediatric Research Initiative ,Rare Diseases ,Pediatric ,Biotechnology ,2.1 Biological and endogenous factors ,Aetiology ,Adolescent ,Child ,Humans ,Animals ,Mice ,Early Detection of Cancer ,Bone Marrow ,Drug Evaluation ,Preclinical ,Osteosarcoma ,Bone Neoplasms ,osteosarcoma ,cancer ,model ,tumorigenesis ,bone marrow - Abstract
Osteosarcoma (OS) is the most common primary malignant bone cancer in children and adolescents. While numerous other cancers now have promising therapeutic advances, treatment options for OS have remained unchanged since the advent of standard chemotherapeutics and offer less than a 25% 5-y survival rate for those with metastatic disease. This dearth of clinical progress underscores a lack of understanding of OS progression and necessitates the study of this disease in an innovative system. Here, we adapt a previously described engineered bone marrow (eBM) construct for use as a three-dimensional platform to study how microenvironmental and immune factors affect OS tumor progression. We form eBM by implanting acellular bone-forming materials in mice and explanting the cellularized constructs after 8 wk for study. We interrogate the influence of the anatomical implantation site on eBM tissue quality, test ex vivo stability under normoxic (5% O2) and standard (21% O2) culture conditions, culture OS cells within these constructs, and compare them to human OS samples. We show that eBM stably recapitulates the composition of native bone marrow. OS cells exhibit differential behavior dependent on metastatic potential when cultured in eBM, thus mimicking in vivo conditions. Furthermore, we highlight the clinical applicability of eBM as a drug-screening platform through doxorubicin treatment and show that eBM confers a protective effect on OS cells that parallel clinical responses. Combined, this work presents eBM as a cellular construct that mimics the complex bone marrow environment that is useful for mechanistic bone cancer research and drug screening.
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- 2023
5. Degradation Resistant Hypoxia Inducible Factor 2α in Murine Osteocytes Promotes a High Bone Mass Phenotype
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Mendoza, Sarah V, Murugesh, Deepa K, Christiansen, Blaine A, Genetos, Zoe O, Loots, Gabriela G, Genetos, Damian C, and Yellowley, Clare E
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Biomedical and Clinical Sciences ,Genetics ,1.1 Normal biological development and functioning ,Aetiology ,2.1 Biological and endogenous factors ,Underpinning research ,Musculoskeletal ,GENETIC ANIMAL MODELS ,OSTEOCLAST ,OSTEOCYTE ,Biomedical and clinical sciences - Abstract
Molecular oxygen levels vary during development and disease. Adaptations to decreased oxygen bioavailability (hypoxia) are mediated by hypoxia-inducible factor (HIF) transcription factors. HIFs are composed of an oxygen-dependent α subunit (HIF-α), of which there are two transcriptionally active isoforms (HIF-1α and HIF-2α), and a constitutively expressed β subunit (HIFβ). Under normoxic conditions, HIF-α is hydroxylated via prolyl hydroxylase domain (PHD) proteins and targeted for degradation via Von Hippel-Lindau (VHL). Under hypoxic conditions, hydroxylation via PHD is inhibited, allowing for HIF-α stabilization and induction of target transcriptional changes. Our previous studies showed that Vhl deletion in osteocytes (Dmp1-cre; Vhl f/f ) resulted in HIF-α stabilization and generation of a high bone mass (HBM) phenotype. The skeletal impact of HIF-1α accumulation has been well characterized; however, the unique skeletal impacts of HIF-2α remain understudied. Because osteocytes orchestrate skeletal development and homeostasis, we investigated the role of osteocytic HIF-α isoforms in driving HBM phenotypes via osteocyte-specific loss-of-function and gain-of-function HIF-1α and HIF-2α mutations in C57BL/6 female mice. Deletion of Hif1a or Hif2a in osteocytes showed no effect on skeletal microarchitecture. Constitutively stable, degradation-resistant HIF-2α (HIF-2α cDR), but not HIF-1α cDR, generated dramatic increases in bone mass, enhanced osteoclast activity, and expansion of metaphyseal marrow stromal tissue at the expense of hematopoietic tissue. Our studies reveal a novel influence of osteocytic HIF-2α in driving HBM phenotypes that can potentially be harnessed pharmacologically to improve bone mass and reduce fracture risk. © 2023 The Authors. JBMR Plus published by Wiley Periodicals LLC on behalf of American Society for Bone and Mineral Research.
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- 2023
6. Differential bone adaptation to mechanical unloading and reloading in young, old, and osteocyte deficient mice
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Cunningham, Hailey C, Orr, Sophie, Murugesh, Deepa K, Hsia, Allison W, Osipov, Benjamin, Go, Lauren, Wu, Po Hung, Wong, Alice, Loots, Gabriela G, Kazakia, Galateia J, and Christiansen, Blaine A
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Biomedical and Clinical Sciences ,Clinical Sciences ,Osteoporosis ,Aging ,2.1 Biological and endogenous factors ,Musculoskeletal ,Mice ,Animals ,Osteocytes ,Bone and Bones ,Cortical Bone ,Femur ,Hindlimb Suspension ,Mice ,Transgenic ,Hindlimb unloading ,Bone adaptation ,Cortical porosity ,osteocytes ,aging ,bone adaptation ,cortical porosity ,Biological Sciences ,Engineering ,Medical and Health Sciences ,Endocrinology & Metabolism ,Clinical sciences - Abstract
Mechanical unloading causes rapid loss of bone structure and strength, which gradually recovers after resuming normal loading. However, it is not well established how this adaptation to unloading and reloading changes with age. Clinically, elderly patients are more prone to musculoskeletal injury and longer periods of bedrest, therefore it is important to understand how periods of disuse will affect overall skeletal health of aged subjects. Bone also undergoes an age-related decrease in osteocyte density, which may impair mechanoresponsiveness. In this study, we examined bone adaptation during unloading and subsequent reloading in mice. Specifically, we examined the differences in bone adaptation between young mice (3-month-old), old mice (18-month-old), and transgenic mice that exhibit diminished osteocyte density at a young age (3-month-old BCL-2 transgenic mice). Mice underwent 14 days of hindlimb unloading followed by up to 14 days of reloading. We analyzed trabecular and cortical bone structure in the femur, mechanical properties of the femoral cortical diaphysis, osteocyte density and cell death in cortical bone, and serum levels of inflammatory cytokines. We found that young mice lost ~10% cortical bone volume and 27-42% trabecular bone volume during unloading and early reloading, with modest recovery of metaphyseal trabecular bone and near total recovery of epiphyseal trabecular bone, but no recovery of cortical bone after 14 days of reloading. Old mice lost 12-14% cortical bone volume and 35-50% trabecular bone volume during unloading and early reloading but had diminished recovery of trabecular bone during reloading and no recovery of cortical bone. In BCL-2 transgenic mice, no cortical bone loss was observed during unloading or reloading, but 28-31% trabecular bone loss occurred during unloading and early reloading, with little to no recovery during reloading. No significant differences in circulating inflammatory cytokine levels were observed due to unloading and reloading in any of the experimental groups. These results illustrate important differences in bone adaptation in older and osteocyte deficient mice, suggesting a possible period of vulnerability in skeletal health in older subjects during and following a period of disuse that may affect skeletal health in elderly patients.
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- 2023
7. Loss of Cadherin-11 in pancreatic ductal adenocarcinoma alters tumor-immune microenvironment
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Sebastian, Aimy, Martin, Kelly A, Peran, Ivana, Hum, Nicholas R, Leon, Nicole F, Amiri, Beheshta, Wilson, Stephen P, Coleman, Matthew A, Wheeler, Elizabeth K, Byers, Stephen W, and Loots, Gabriela G
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Immunology ,Immunotherapy ,Rare Diseases ,Pancreatic Cancer ,Orphan Drug ,Cancer ,Digestive Diseases ,2.1 Biological and endogenous factors ,PDAC ,CDH11 ,CAF ,IL33 ,MDSC ,T cells ,Clinical sciences ,Oncology and carcinogenesis - Abstract
Pancreatic ductal adenocarcinoma (PDAC) is one of the top five deadliest forms of cancer with very few treatment options. The 5-year survival rate for PDAC is 10% following diagnosis. Cadherin 11 (Cdh11), a cell-to-cell adhesion molecule, has been suggested to promote tumor growth and immunosuppression in PDAC, and Cdh11 inhibition significantly extended survival in mice with PDAC. However, the mechanisms by which Cdh11 deficiency influences PDAC progression and anti-tumor immune responses have yet to be fully elucidated. To investigate Cdh11-deficiency induced changes in PDAC tumor microenvironment (TME), we crossed p48-Cre; LSL-KrasG12D/+; LSL-Trp53R172H/+ (KPC) mice with Cdh11+/- mice and performed single-cell RNA sequencing (scRNA-seq) of the non-immune (CD45-) and immune (CD45+) compartment of KPC tumor-bearing Cdh11 proficient (KPC-Cdh11+/+) and Cdh11 deficient (KPC-Cdh11+/-) mice. Our analysis showed that Cdh11 is expressed primarily in cancer-associated fibroblasts (CAFs) and at low levels in epithelial cells undergoing epithelial-to-mesenchymal transition (EMT). Cdh11 deficiency altered the molecular profile of CAFs, leading to a decrease in the expression of myofibroblast markers such as Acta2 and Tagln and cytokines such as Il6, Il33 and Midkine (Mdk). We also observed a significant decrease in the presence of monocytes/macrophages and neutrophils in KPC-Cdh11+/- tumors while the proportion of T cells was increased. Additionally, myeloid lineage cells from Cdh11-deficient tumors had reduced expression of immunosuppressive cytokines that have previously been shown to play a role in immune suppression. In summary, our data suggests that Cdh11 deficiency significantly alters the fibroblast and immune microenvironments and contributes to the reduction of immunosuppressive cytokines, leading to an increase in anti-tumor immunity and enhanced survival.
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- 2023
8. Interactions Between Diabetes Mellitus and Osteoarthritis: From Animal Studies to Clinical Data
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Rios‐Arce, Naiomy D, Hum, Nicholas R, and Loots, Gabriela G
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Biomedical and Clinical Sciences ,Nutrition ,Osteoarthritis ,Arthritis ,Diabetes ,Pain Research ,Aging ,Prevention ,Chronic Pain ,Obesity ,Metabolic and endocrine ,Musculoskeletal ,CARTILAGE ,DIABETES ,TYPE 1 DIABETES ,OSTEOARTHRITIS ,POSTTRAUMATIC OSTEOARTHRITIS ,TYPE 2 DIABETES ,Biomedical and clinical sciences - Abstract
Diabetes mellitus (DM) and osteoarthritis (OA) are commonly known metabolic diseases that affect a large segment of the world population. These two conditions share several risk factors such as obesity and aging; however, there is still no consensus regarding the direct role of DM on OA development and progression. Interestingly, both animal and human studies have yielded conflicting results, with some showing a significant role for DM in promoting OA, while others found no significant interactions between these conditions. In this review, we will discuss preclinical and clinical data that assessed the interaction between DM and OA. We will also discuss possible mechanisms associated with the effect of high glucose on the articular cartilage and chondrocytes. An emerging theme dominates the breath of published work in this area: most of the studies discussed in this review do not take into consideration the role of other factors such as the type of diabetes, age, biological sex, type of animal model, body mass index, and the use of pain medications when analyzing and interpreting data. Therefore, future studies should be more rigorous when designing experiments looking at DM and its effects on OA and should carefully account for these confounding factors, so that better approaches can be developed for monitoring and treating patients at risk of OA and DM. © 2022 The Authors. JBMR Plus published by Wiley Periodicals LLC on behalf of American Society for Bone and Mineral Research.
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- 2022
9. Preexisting Type 1 Diabetes Mellitus Blunts the Development of Posttraumatic Osteoarthritis
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Rios‐Arce, Naiomy D, Murugesh, Deepa K, Hum, Nicholas R, Sebastian, Aimy, Jbeily, Elias H, Christiansen, Blaine A, and Loots, Gabriela G
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Biomedical and Clinical Sciences ,Autoimmune Disease ,Arthritis ,Osteoarthritis ,Diabetes ,Prevention ,Aging ,Physical Injury - Accidents and Adverse Effects ,2.1 Biological and endogenous factors ,Aetiology ,Metabolic and endocrine ,Musculoskeletal ,CARTILAGE ,DIABETES ,GENE EXPRESSION PROFILE ,OSTEOARTHRITIS ,POSTTRAUMATIC OSTEOARTHRITIS ,Biomedical and clinical sciences - Abstract
Type 1 diabetes mellitus (T1DM) affects 9.5% of the population. T1DM is characterized by severe insulin deficiency that causes hyperglycemia and leads to several systemic effects. T1DM has been suggested as a risk factor for articular cartilage damage and loss, which could expedite the development of osteoarthritis (OA). OA represents a major public health challenge by affecting 300 million people globally, yet very little is known about the correlation between T1DM and OA. In addition, current studies that have looked at the interaction between diabetes mellitus and OA have reported conflicting results with some suggesting a positive correlation whereas others did not. In this study, we aimed to evaluate whether T1DM exacerbates the development of spontaneous OA or accelerates the progression of posttraumatic osteoarthritis (PTOA) after joint injury. Histological evaluation of T1DM and control joints determined that T1DM mice displayed cartilage degeneration measurements consistent with mild OA phenotypes. RNA sequencing analyses identified significantly upregulated genes in T1DM corresponding to matrix-degrading enzymes known to promote cartilage matrix degradation, suggesting a role of these enzymes in OA development. Next, we assessed whether preexisting T1DM influences PTOA development subsequent to trauma. At 6 weeks post-injury, T1DM injured joints displayed significantly less cartilage damage and joint degeneration than injured non-diabetic joints, suggesting a significant delay in PTOA disease progression. At the single-cell resolution, we identified increased number of cells expressing the chondrocyte markers Col2a1, Acan, and Cytl1 in the T1DM injured group. Our findings demonstrate that T1DM can be a risk factor for OA but not for PTOA. This study provides the first account of single-cell resolution related to T1DM and the risk for OA and PTOA. © 2022 The Authors. JBMR Plus published by Wiley Periodicals LLC on behalf of American Society for Bone and Mineral Research.
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- 2022
10. Altered canalicular remodeling associated with femur fracture in mice
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Emami, Armaun J, Sebastian, Aimy, Lin, Yu‐Yang, Yee, Cristal S, Osipov, Benjamin, Loots, Gabriela G, Alliston, Tamara, and Christiansen, Blaine A
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Engineering ,Biomedical Engineering ,Genetics ,Osteoporosis ,Women's Health ,Musculoskeletal ,Injuries and accidents ,Animals ,Bone Remodeling ,Femoral Fractures ,Femur ,Mice ,Osteocytes ,X-Ray Microtomography ,bone histomorphometry ,fracture healing ,osteocytes ,perilacunar ,canalicular remodeling ,mu CT ,perilacunar/canalicular remodeling ,μCT ,Clinical Sciences ,Human Movement and Sports Sciences ,Orthopedics ,Biomedical engineering ,Sports science and exercise - Abstract
We previously showed that femur fracture in mice caused a reduction in bone volume at distant skeletal sites within 2 weeks post-fracture. Osteocytes also have the ability to remodel their surrounding bone matrix through perilacunar/canalicular remodeling (PLR). If PLR is altered systemically following fracture, this could affect bone mechanical properties and increase fracture risk at all skeletal sites. In this study, we investigated whether lacunar-canalicular microstructure and the rate of PLR are altered in the contralateral limb following femoral fracture in mice. We hypothesized that femoral fracture would accelerate PLR by 2 weeks postfracture, followed by partial recovery by 4 weeks. We used histological evaluation and high-resolution microcomputed tomography to quantify the morphology of the lacunar-canalicular network at the contralateral tibia, and we used quantitative real-time polymerase chain reaction (RT-PCR) and RNA-seq to measure the expression of PLR-associated genes in the contralateral femur. We found that at both 2 and 4 weeks postfracture, canalicular width was significantly increased by 18.6% and 16.6%, respectively, in fractured mice relative to unfractured controls. At 3 days and 4 weeks post-fracture, we observed downregulation of PLR-associated genes; RNA-seq analysis at 3 days post-fracture showed a deceleration of bone formation and mineralization in the contralateral limb. These data demonstrate notable canalicular changes following fracture that could affect bone mechanical properties. These findings expand our understanding of systemic effects of fracture and how biological and structural changes at distant skeletal sites may contribute to increased fracture risk following an acute injury.
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- 2022
11. Synthetic antibacterial minerals: harnessing a natural geochemical reaction to combat antibiotic resistance
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Morrison, Keith D, Martin, Kelly A, Wimpenny, Josh B, and Loots, Gabriela G
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Lung ,Prevention ,Vaccine Related ,Infectious Diseases ,Biodefense ,Antimicrobial Resistance ,Emerging Infectious Diseases ,Pneumonia ,Development of treatments and therapeutic interventions ,5.1 Pharmaceuticals ,Infection ,Animals ,Anti-Bacterial Agents ,Drug Resistance ,Bacterial ,Mice ,Microbial Sensitivity Tests ,Minerals ,NIH 3T3 Cells ,Silicates - Abstract
The overuse of antibiotics in clinical and livestock settings is accelerating the selection of multidrug resistant bacterial pathogens. Antibiotic resistant bacteria result in increased mortality and financial strain on the health care and livestock industry. The development of new antibiotics has stalled, and novel strategies are needed as we enter the age of antibiotic resistance. Certain naturally occurring clays have been shown to have antimicrobial properties and kill antibiotic resistant bacteria. Harnessing the activity of compounds within these clays that harbor antibiotic properties offers new therapeutic opportunities for fighting the potentially devastating effects of the post antibiotic era. However, natural samples are highly heterogenous and exhibit variable antibacterial effectiveness, therefore synthesizing minerals of high purity with reproducible antibacterial activity is needed. Here we describe for the first time synthetic smectite clay minerals and Fe-sulfide microspheres that reproduce the geochemical antibacterial properties observed in natural occurring clays. We show that these mineral formulations are effective at killing the ESKAPE pathogens (Enterococcus sp., Staphylococcus aureus, Klebsiella pneumoniae, Acinetobacter sp., Pseudomonas aeruginosa and Enterobacter sp.) by maintaining Fe2+ solubility and reactive oxygen species (ROS) production while buffering solution pH, unlike the application of metals alone. Our results represent the first step in utilizing a geochemical process to treat antibiotic resistant topical or gastrointestinal infections in the age of antibiotic resistance.
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- 2022
12. Dose-dependent consequences of sub-chronic fentanyl exposure on neuron and glial co-cultures.
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Lam, Doris, Sebastian, Aimy, Bogguri, Chandrakumar, Hum, Nicholas R, Ladd, Alexander, Cadena, Jose, Valdez, Carlos A, Fischer, Nicholas O, Loots, Gabriela G, and Enright, Heather A
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cell culture ,fentanyl ,multi-electrode array ,neural network ,neuron-glia co-culture ,opioids ,Pain Research ,Substance Misuse ,Neurosciences ,Chronic Pain ,Brain Disorders ,Drug Abuse (NIDA only) ,Neurological ,Good Health and Well Being - Abstract
Fentanyl is one of the most common opioid analgesics administered to patients undergoing surgery or for chronic pain management. While the side effects of chronic fentanyl abuse are recognized (e.g., addiction, tolerance, impairment of cognitive functions, and inhibit nociception, arousal, and respiration), it remains poorly understood what and how changes in brain activity from chronic fentanyl use influences the respective behavioral outcome. Here, we examined the functional and molecular changes to cortical neural network activity following sub-chronic exposure to two fentanyl concentrations, a low (0.01 μM) and high (10 μM) dose. Primary rat co-cultures, containing cortical neurons, astrocytes, and oligodendrocyte precursor cells, were seeded in wells on either a 6-well multi-electrode array (MEA, for electrophysiology) or a 96-well tissue culture plate (for serial endpoint bulk RNA sequencing analysis). Once networks matured (at 28 days in vitro), co-cultures were treated with 0.01 or 10 μM of fentanyl for 4 days and monitored daily. Only high dose exposure to fentanyl resulted in a decline in features of spiking and bursting activity as early as 30 min post-exposure and sustained for 4 days in cultures. Transcriptomic analysis of the complex cultures after 4 days of fentanyl exposure revealed that both the low and high dose induced gene expression changes involved in synaptic transmission, inflammation, and organization of the extracellular matrix. Collectively, the findings of this in vitro study suggest that while neuroadaptive changes to neural network activity at a systems level was detected only at the high dose of fentanyl, transcriptomic changes were also detected at the low dose conditions, suggesting that fentanyl rapidly elicits changes in plasticity.
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- 2022
13. Single-cell RNA-Seq reveals changes in immune landscape in post-traumatic osteoarthritis
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Sebastian, Aimy, Hum, Nicholas R, McCool, Jillian L, Wilson, Stephen P, Murugesh, Deepa K, Martin, Kelly A, Rios-Arce, Naiomy Deliz, Amiri, Beheshta, Christiansen, Blaine A, and Loots, Gabriela G
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Biomedical and Clinical Sciences ,Immunology ,Aging ,Arthritis ,Physical Injury - Accidents and Adverse Effects ,Osteoarthritis ,2.1 Biological and endogenous factors ,Aetiology ,Musculoskeletal ,Good Health and Well Being ,Animals ,Anterior Cruciate Ligament Injuries ,Folate Receptor 2 ,Humans ,Knee Joint ,Membrane Glycoproteins ,Mice ,RNA-Seq ,Receptors ,Immunologic ,osteoarthritis ,ptoa ,scRNA-seq ,immune cells ,macrophages ,inflammation ,knee injury ,Trem2 ,Medical Microbiology ,Biochemistry and cell biology ,Genetics - Abstract
Osteoarthritis (OA) is the most common joint disease, affecting over 300 million people world-wide. Accumulating evidence attests to the important roles of the immune system in OA pathogenesis. Understanding the role of various immune cells in joint degeneration or joint repair after injury is vital for improving therapeutic strategies for treating OA. Post-traumatic osteoarthritis (PTOA) develops in ~50% of individuals who have experienced an articular trauma like an anterior cruciate ligament (ACL) rupture. Here, using the high resolution of single-cell RNA sequencing, we delineated the temporal dynamics of immune cell accumulation in the mouse knee joint after ACL rupture. Our study identified multiple immune cell types in the joint including neutrophils, monocytes, macrophages, B cells, T cells, NK cells and dendritic cells. Monocytes and macrophage populations showed the most dramatic changes after injury. Further characterization of monocytes and macrophages reveled 9 major subtypes with unique transcriptomics signatures, including a tissue resident Lyve1hiFolr2hi macrophage population and Trem2hiFcrls+ recruited macrophages, both showing enrichment for phagocytic genes and growth factors such as Igf1, Pdgfa and Pdgfc. We also identified several genes induced or repressed after ACL injury in a cell type-specific manner. This study provides new insight into PTOA-associated changes in the immune microenvironment and highlights macrophage subtypes that may play a role in joint repair after injury.
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- 2022
14. IL-17A Increases Doxorubicin Efficacy in Triple Negative Breast Cancer
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Hum, Nicholas R, Sebastian, Aimy, Martin, Kelly A, Rios-Arce, Naiomy D, Gilmore, Sean F, Gravano, David M, Wheeler, Elizabeth K, Coleman, Matthew A, and Loots, Gabriela G
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Immunology ,Immunotherapy ,Breast Cancer ,Cancer ,Women's Health ,5.1 Pharmaceuticals ,triple negative breast cancer ,doxorubicin ,IL-17A ,gamma delta T cells ,chemoresistance ,single cell RNA seq ,4T1 ,γδ T cells ,Clinical sciences ,Oncology and carcinogenesis - Abstract
Due to lack of targetable receptors and intertumoral heterogeneity, triple negative breast cancer (TNBC) remains particularly difficult to treat. Doxorubicin (DOX) is typically used as nonselective neoadjuvant chemotherapy, but the diversity of treatment efficacy remains unclear. Comparable to variability in clinical response, an experimental model of TNBC using a 4T1 syngeneic mouse model was found to elicit a differential response to a seven-day treatment regimen of DOX. Single-cell RNA sequencing identified an increase in T cells in tumors that responded to DOX treatment compared to tumors that continued to grow uninhibited. Additionally, compared to resistant tumors, DOX sensitive tumors contained significantly more CD4 T helper cells (339%), γδ T cells (727%), Naïve T cells (278%), and activated CD8 T cells (130%). Furthermore, transcriptional profiles of tumor infiltrated T cells in DOX responsive tumors revealed decreased exhaustion, increased chemokine/cytokine expression, and increased activation and cytotoxic activity. γδ T cell derived IL-17A was identified to be highly abundant in the sensitive tumor microenvironment. IL-17A was also found to directly increase sensitivity of TNBC cells in combination with DOX treatment. In TNBC tumors sensitive to DOX, increased IL-17A levels lead to a direct effect on cancer cell responsiveness and chronic stimulation of tumor infiltrated T cells leading to improved chemotherapeutic efficacy. IL-17A's role as a chemosensitive cytokine in TNBC may offer new opportunities for treating chemoresistant breast tumors and other cancer types.
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- 2022
15. MAVS mediates a protective immune response in the brain to Rift Valley fever virus
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Hum, Nicholas R, Bourguet, Feliza A, Sebastian, Aimy, Lam, Doris, Phillips, Ashlee M, Sanchez, Kristina R, Rasley, Amy, Loots, Gabriela G, and Weilhammer, Dina R
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Prevention ,Emerging Infectious Diseases ,Infectious Diseases ,Brain Disorders ,Genetics ,Vector-Borne Diseases ,Vaccine Related ,Immunization ,2.2 Factors relating to the physical environment ,Aetiology ,2.1 Biological and endogenous factors ,Infection ,Inflammatory and immune system ,Good Health and Well Being ,Animals ,Antiviral Agents ,Brain ,Encephalitis ,Immunity ,Mice ,Rift Valley Fever ,Rift Valley fever virus ,Microbiology ,Immunology ,Medical Microbiology ,Virology - Abstract
Rift Valley fever virus (RVFV) is a highly pathogenic mosquito-borne virus capable of causing hepatitis, encephalitis, blindness, hemorrhagic syndrome, and death in humans and livestock. Upon aerosol infection with RVFV, the brain is a major site of viral replication and tissue damage, yet pathogenesis in this organ has been understudied. Here, we investigated the immune response in the brain of RVFV infected mice. In response to infection, microglia initiated robust transcriptional upregulation of antiviral immune genes, as well as increased levels of activation markers and cytokine secretion that is dependent on mitochondrial antiviral-signaling protein (MAVS) and independent of toll-like receptors 3 and 7. In vivo, Mavs-/- mice displayed enhanced susceptibility to RVFV as determined by increased brain viral burden and higher mortality. Single-cell RNA sequence analysis identified defects in type I interferon and interferon responsive gene expression within microglia in Mavs-/- mice, as well as dysregulated lymphocyte infiltration. The results of this study provide a crucial step towards understanding the precise molecular mechanisms by which RVFV infection is controlled in the brain and will help inform the development of vaccines and antiviral therapies that are effective in preventing encephalitis.
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- 2022
16. Mef2c regulates bone mass through Sost-dependent and -independent mechanisms
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Morfin, Cesar, Sebastian, Aimy, Wilson, Stephen P., Amiri, Beheshta, Murugesh, Deepa K., Hum, Nicholas R., Christiansen, Blaine A., and Loots, Gabriela G.
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- 2024
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17. Sclerostin Depletion Induces Inflammation in the Bone Marrow of Mice.
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Donham, Cristine, Chicana, Betsabel, Robling, Alexander G, Mohamed, Asmaa, Elizaldi, Sonny, Chi, Michael, Freeman, Brian, Millan, Alberto, Murugesh, Deepa K, Hum, Nicholas R, Sebastian, Aimy, Loots, Gabriela G, and Manilay, Jennifer O
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aging ,genetic animal models ,osteoimmunology ,osteopetrosis ,Chemical Physics ,Other Chemical Sciences ,Genetics ,Other Biological Sciences - Abstract
Romosozumab, a humanized monoclonal antibody specific for sclerostin (SOST), has been approved for treatment of postmenopausal women with osteoporosis at a high risk for fracture. Previous work in sclerostin global knockout (Sost-/-) mice indicated alterations in immune cell development in the bone marrow (BM), which could be a possible side effect in romosozumab-treated patients. Here, we examined the effects of short-term sclerostin depletion in the BM on hematopoiesis in young mice receiving sclerostin antibody (Scl-Ab) treatment for 6 weeks, and the effects of long-term Sost deficiency on wild-type (WT) long-term hematopoietic stem cells transplanted into older cohorts of Sost-/- mice. Our analyses revealed an increased frequency of granulocytes in the BM of Scl-Ab-treated mice and WT→Sost-/- chimeras, indicating myeloid-biased differentiation in Sost-deficient BM microenvironments. This myeloid bias extended to extramedullary hematopoiesis in the spleen and was correlated with an increase in inflammatory cytokines TNFα, IL-1α, and MCP-1 in Sost-/- BM serum. Additionally, we observed alterations in erythrocyte differentiation in the BM and spleen of Sost-/- mice. Taken together, our current study indicates novel roles for Sost in the regulation of myelopoiesis and control of inflammation in the BM.
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- 2021
18. Single-Cell RNA-Seq Reveals Transcriptomic Heterogeneity and Post-Traumatic Osteoarthritis-Associated Early Molecular Changes in Mouse Articular Chondrocytes.
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Sebastian, Aimy, McCool, Jillian L, Hum, Nicholas R, Murugesh, Deepa K, Wilson, Stephen P, Christiansen, Blaine A, and Loots, Gabriela G
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PTOA ,cartilage ,chondrocyte heterogeneity ,gene expression ,knee injury ,osteoarthritis ,scRNA-seq - Abstract
Articular cartilage is a connective tissue lining the surfaces of synovial joints. When the cartilage severely wears down, it leads to osteoarthritis (OA), a debilitating disease that affects millions of people globally. The articular cartilage is composed of a dense extracellular matrix (ECM) with a sparse distribution of chondrocytes with varying morphology and potentially different functions. Elucidating the molecular and functional profiles of various chondrocyte subtypes and understanding the interplay between these chondrocyte subtypes and other cell types in the joint will greatly expand our understanding of joint biology and OA pathology. Although recent advances in high-throughput OMICS technologies have enabled molecular-level characterization of tissues and organs at an unprecedented resolution, thorough molecular profiling of articular chondrocytes has not yet been undertaken, which may be in part due to the technical difficulties in isolating chondrocytes from dense cartilage ECM. In this study, we profiled articular cartilage from healthy and injured mouse knee joints at a single-cell resolution and identified nine chondrocyte subtypes with distinct molecular profiles and injury-induced early molecular changes in these chondrocytes. We also compared mouse chondrocyte subpopulations to human chondrocytes and evaluated the extent of molecular similarity between mice and humans. This work expands our view of chondrocyte heterogeneity and rapid molecular changes in chondrocyte populations in response to joint trauma and highlights potential mechanisms that trigger cartilage degeneration.
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- 2021
19. Improving Bone Health by Optimizing the Anabolic Action of Wnt Inhibitor Multitargeting
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Choi, Roy B, Bullock, Whitney A, Hoggatt, April M, Loots, Gabriela G, Genetos, Damian C, and Robling, Alexander G
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Biomedical and Clinical Sciences ,Clinical Sciences ,Osteoporosis ,Musculoskeletal ,BONE ANABOLISM ,OSTEOPOROSIS ,SCLEROSTIN Dkk1 ,Wnt ,Biomedical and clinical sciences - Abstract
Sclerostin antibody (romosozumab) was recently approved for clinical use in the United States to treat osteoporosis. We and others have explored Wnt-based combination therapy to disproportionately improve the anabolic effects of sclerostin inhibition, including cotreatment with sclerostin antibody (Scl-mAb) and Dkk1 antibody (Dkk1-mAb). To determine the optimal ratio of Scl-mAb and Dkk1-mAb for producing maximal anabolic action, the proportion of Scl-mAb and Dkk1-mAb were systematically varied while holding the total antibody dose constant. A 3:1 mixture of Scl-mAb to Dkk1-mAb produced two to three times as much cancellous bone mass as an equivalent dose of Scl-mAb alone. Further, a 75% reduction in the dose of the 3:1 mixture was equally efficacious to a full dose of Scl-mAb in the distal femur metaphysis. The Scl-mAb/Dkk1-mAb combination approach was highly efficacious in the cancellous bone mass, but the cortical compartment was much more subtly affected. The osteoanabolic effects of Wnt pathway targeting can be made more efficient if multiple antagonists are simultaneously targeted. © 2021 The Authors. JBMR Plus published by Wiley Periodicals LLC. on behalf of American Society for Bone and Mineral Research.
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- 2021
20. Cadherin 11 Promotes Immunosuppression and Extracellular Matrix Deposition to Support Growth of Pancreatic Tumors and Resistance to Gemcitabine in Mice
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Peran, Ivana, Dakshanamurthy, Sivanesan, McCoy, Matthew D, Mavropoulos, Anastasia, Allo, Bedilu, Sebastian, Aimy, Hum, Nicholas R, Sprague, Sara C, Martin, Kelly A, Pishvaian, Michael J, Vietsch, Eveline E, Wellstein, Anton, Atkins, Michael B, Weiner, Louis M, Quong, Andrew A, Loots, Gabriela G, Yoo, Stephen S, Assefnia, Shahin, and Byers, Stephen W
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Immunology ,Rare Diseases ,Pancreatic Cancer ,Digestive Diseases ,Cancer ,2.1 Biological and endogenous factors ,Aetiology ,Animals ,Cadherins ,Cancer-Associated Fibroblasts ,Carcinoma ,Pancreatic Ductal ,Deoxycytidine ,Disease Models ,Animal ,Disease Progression ,Drug Resistance ,Neoplasm ,Extracellular Matrix ,Female ,Gene Expression Regulation ,Neoplastic ,Humans ,Metallothionein 3 ,Mice ,Mice ,Knockout ,Pancreas ,Pancreatic Neoplasms ,Pancreaticoduodenectomy ,Tumor Escape ,Tumor Microenvironment ,Gemcitabine ,Immunomodulation ,Anti-Tumor Immunity ,Activated Stroma ,Desmoplasia ,Inflammation ,Clinical Sciences ,Neurosciences ,Paediatrics and Reproductive Medicine ,Gastroenterology & Hepatology ,Clinical sciences ,Nutrition and dietetics - Abstract
Background & aimsPancreatic ductal adenocarcinomas (PDACs) are characterized by fibrosis and an abundance of cancer-associated fibroblasts (CAFs). We investigated strategies to disrupt interactions among CAFs, the immune system, and cancer cells, focusing on adhesion molecule CDH11, which has been associated with other fibrotic disorders and is expressed by activated fibroblasts.MethodsWe compared levels of CDH11 messenger RNA in human pancreatitis and pancreatic cancer tissues and cells with normal pancreas, and measured levels of CDH11 protein in human and mouse pancreatic lesions and normal tissues. We crossed p48-Cre;LSL-KrasG12D/+;LSL-Trp53R172H/+ (KPC) mice with CDH11-knockout mice and measured survival times of offspring. Pancreata were collected and analyzed by histology, immunohistochemistry, and (single-cell) RNA sequencing; RNA and proteins were identified by imaging mass cytometry. Some mice were given injections of PD1 antibody or gemcitabine and survival was monitored. Pancreatic cancer cells from KPC mice were subcutaneously injected into Cdh11+/+ and Cdh11-/- mice and tumor growth was monitored. Pancreatic cancer cells (mT3) from KPC mice (C57BL/6), were subcutaneously injected into Cdh11+/+ (C57BL/6J) mice and mice were given injections of antibody against CDH11, gemcitabine, or small molecule inhibitor of CDH11 (SD133) and tumor growth was monitored.ResultsLevels of CDH11 messenger RNA and protein were significantly higher in CAFs than in pancreatic cancer epithelial cells, human or mouse pancreatic cancer cell lines, or immune cells. KPC/Cdh11+/- and KPC/Cdh11-/- mice survived significantly longer than KPC/Cdh11+/+ mice. Markers of stromal activation entirely surrounded pancreatic intraepithelial neoplasias in KPC/Cdh11+/+ mice and incompletely in KPC/Cdh11+/- and KPC/Cdh11-/- mice, whose lesions also contained fewer FOXP3+ cells in the tumor center. Compared with pancreatic tumors in KPC/Cdh11+/+ mice, tumors of KPC/Cdh11+/- mice had increased markers of antigen processing and presentation; more lymphocytes and associated cytokines; decreased extracellular matrix components; and reductions in markers and cytokines associated with immunosuppression. Administration of the PD1 antibody did not prolong survival of KPC mice with 0, 1, or 2 alleles of Cdh11. Gemcitabine extended survival of KPC/Cdh11+/- and KPC/Cdh11-/- mice only or reduced subcutaneous tumor growth in mT3 engrafted Cdh11+/+ mice when given in combination with the CDH11 antibody. A small molecule inhibitor of CDH11 reduced growth of pre-established mT3 subcutaneous tumors only if T and B cells were present in mice.ConclusionsKnockout or inhibition of CDH11, which is expressed by CAFs in the pancreatic tumor stroma, reduces growth of pancreatic tumors, increases their response to gemcitabine, and significantly extends survival of mice. CDH11 promotes immunosuppression and extracellular matrix deposition, and might be developed as a therapeutic target for pancreatic cancer.
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- 2021
21. LPS‐Induced Inflammation Prior to Injury Exacerbates the Development of Post‐Traumatic Osteoarthritis in Mice
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Mendez, Melanie E, Sebastian, Aimy, Murugesh, Deepa K, Hum, Nicholas R, McCool, Jillian L, Hsia, Allison W, Christiansen, Blaine A, and Loots, Gabriela G
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Biomedical and Clinical Sciences ,Clinical Sciences ,Physical Injury - Accidents and Adverse Effects ,Arthritis ,Osteoarthritis ,Aging ,Genetics ,Aetiology ,2.1 Biological and endogenous factors ,Inflammatory and immune system ,Musculoskeletal ,Animals ,Cartilage ,Articular ,Humans ,Inflammation ,Lipopolysaccharides ,Mice ,X-Ray Microtomography ,ACL ,BONE ,INFLAMMATION ,LPS ,MRL/MpJ ,OSTEOARTHRITIS ,RNA SEQUENCING ,mu CT ,μCT ,Biological Sciences ,Engineering ,Medical and Health Sciences ,Anatomy & Morphology ,Biological sciences ,Biomedical and clinical sciences - Abstract
Osteoarthritis (OA) is a debilitating and painful disease characterized by the progressive loss of articular cartilage. Post-traumatic osteoarthritis (PTOA) is an injury-induced type of OA that persists in an asymptomatic phase for years before it becomes diagnosed in ~50% of injured individuals. Although PTOA is not classified as an inflammatory disease, it has been suggested that inflammation could be a major driver of PTOA development. Here we examined whether a state of systemic inflammation induced by lipopolysaccharide (LPS) administration 5-days before injury would modulate PTOA outcomes. RNA-seq analysis at 1-day post-injury followed by micro-computed tomography (μCT) and histology characterization at 6 weeks post-injury revealed that LPS administration causes more severe PTOA phenotypes. These phenotypes included significantly higher loss of cartilage and subchondral bone volume. Gene expression analysis showed that LPS alone induced a large cohort of inflammatory genes previously shown to be elevated in synovial M1 macrophages of rheumatoid arthritis (RA) patients, suggesting that systemic LPS produces synovitis. This synovitis was sufficient to promote PTOA in MRL/MpJ mice, a strain previously shown to be resistant to PTOA. The synovium of LPS-treated injured joints displayed an increase in cellularity, and immunohistological examination confirmed that this increase was in part attributable to an elevation in type 1 macrophages. LPS induced the expression of Tlr7 and Tlr8 in both injured and uninjured joints, genes known to be elevated in RA. We conclude that inflammation before injury is an important risk factor for the development of PTOA and that correlating patient serum endotoxin levels or their state of systemic inflammation with PTOA progression may help develop new, effective treatments to lower the rate of PTOA in injured individuals. © 2020 The Authors. Journal of Bone and Mineral Research published by American Society for Bone and Mineral Research.
- Published
- 2020
22. Antibiotic Treatment Prior to Injury Improves Post-Traumatic Osteoarthritis Outcomes in Mice.
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Mendez, Melanie E, Murugesh, Deepa K, Sebastian, Aimy, Hum, Nicholas R, McCloy, Summer A, Kuhn, Edward A, Christiansen, Blaine A, and Loots, Gabriela G
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Cartilage ,Articular ,Animals ,Mice ,Inbred C57BL ,Mice ,Osteoarthritis ,Disease Progression ,Inflammation ,Anti-Bacterial Agents ,Phenotype ,Transcriptome ,Gastrointestinal Microbiome ,Anterior Cruciate Ligament Injuries ,RNA-Seq ,LPS ,PTOA ,RNA-seq ,antibiotics ,cartilage degeneration ,gene expression ,gut microbiome ,osteoarthritis ,tibial compression ,Chronic Pain ,Aging ,Arthritis ,Pain Research ,Injury (total) Accidents/Adverse Effects ,Emerging Infectious Diseases ,2.1 Biological and endogenous factors ,Musculoskeletal ,Injuries and accidents ,Chemical Physics ,Other Chemical Sciences ,Genetics ,Other Biological Sciences - Abstract
Osteoarthritis (OA) is a painful and debilitating disease characterized by the chronic and progressive degradation of articular cartilage. Post-traumatic OA (PTOA) is a secondary form of OA that develops in ~50% of cases of severe articular injury. Inflammation and re-occurring injury have been implicated as contributing to the progression of PTOA after the initial injury. However, there is very little known about external factors prior to injury that could affect the risk of PTOA development. To examine how the gut microbiome affects PTOA development we used a chronic antibiotic treatment regimen starting at weaning for six weeks prior to ACL rupture, in mice. A six-weeks post-injury histological examination showed more robust cartilage staining on the antibiotic (AB)-treated mice than the untreated controls (VEH), suggesting slower disease progression in AB cohorts. Injured joints also showed an increase in the presence of anti-inflammatory M2 macrophages in the AB group. Molecularly, the phenotype correlated with a significantly lower expression of inflammatory genes Tlr5, Ccl8, Cxcl13, and Foxo6 in the injured joints of AB-treated animals. Our results indicate that a reduced state of inflammation at the time of injury and a lower expression of Wnt signaling modulatory protein, Rspo1, caused by AB treatment can slow down or improve PTOA outcomes.
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- 2020
23. Electric Fields at Breast Cancer and Cancer Cell Collective Galvanotaxis.
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Zhu, Kan, Hum, Nicholas R, Reid, Brian, Sun, Qin, Loots, Gabriela G, and Zhao, Min
- Abstract
Cancer growth interferes with local ionic environments, membrane potentials, and transepithelial potentials, resulting in small electrical changes in the tumor microenvironment. Electrical fields (EFs) have significant effects on cancer cell migration (galvanotaxis/electrotaxis), however, their role as a regulator of cancer progression and metastasis is poorly understood. Here, we employed unique probe systems to characterize the electrical properties of cancer cells and their migratory ability under an EF. Subcutaneous tumors were established from a triple-negative murine breast cancer cell line (4T1), electric currents and potentials of tumors were measured using vibrating probe and glass microelectrodes, respectively. Steady outward and inward currents could be detected at different positions on the tumor surface and magnitudes of the electric currents on the tumor surface strongly correlated with tumor weights. Potential measurements also showed the non-homogeneous intratumor electric potentials. Cancer cell migration was then surveyed in the presence of EFs in vitro. Parental 4T1 cells and metastatic sublines in isolation showed random migration in EFs of physiological strength, whereas cells in monolayer migrated collectively to the anode. Our data contribute to an improved understanding of breast cancer metastasis, providing new evidence in support of an electrical mechanism that promotes this phenomenon.
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- 2020
24. Global Gene Expression Analysis Identifies Age-Related Differences in Knee Joint Transcriptome during the Development of Post-Traumatic Osteoarthritis in Mice.
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Sebastian, Aimy, Murugesh, Deepa K, Mendez, Melanie E, Hum, Nicholas R, Rios-Arce, Naiomy D, McCool, Jillian L, Christiansen, Blaine A, and Loots, Gabriela G
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PTOA ,RNA-seq ,aging ,cartilage degeneration ,chondrocytes ,gene expression ,osteoarthritis ,scRNA-seq ,Other Chemical Sciences ,Genetics ,Other Biological Sciences ,Chemical Physics - Abstract
Aging and injury are two major risk factors for osteoarthritis (OA). Yet, very little is known about how aging and injury interact and contribute to OA pathogenesis. In the present study, we examined age- and injury-related molecular changes in mouse knee joints that could contribute to OA. Using RNA-seq, first we profiled the knee joint transcriptome of 10-week-old, 62-week-old, and 95-week-old mice and found that the expression of several inflammatory-response related genes increased as a result of aging, whereas the expression of several genes involved in cartilage metabolism decreased with age. To determine how aging impacts post-traumatic arthritis (PTOA) development, the right knee joints of 10-week-old and 62-week-old mice were injured using a non-invasive tibial compression injury model and injury-induced structural and molecular changes were assessed. At six-week post-injury, 62-week-old mice displayed significantly more cartilage degeneration and osteophyte formation compared with young mice. Although both age groups elicited similar transcriptional responses to injury, 62-week-old mice had higher activation of inflammatory cytokines than 10-week-old mice, whereas cartilage/bone metabolism genes had higher expression in 10-week-old mice, suggesting that the differential expression of these genes might contribute to the differences in PTOA severity observed between these age groups.
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- 2020
25. Single-Cell Transcriptomic Analysis of Tumor-Derived Fibroblasts and Normal Tissue-Resident Fibroblasts Reveals Fibroblast Heterogeneity in Breast Cancer
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Sebastian, Aimy, Hum, Nicholas R, Martin, Kelly A, Gilmore, Sean F, Peran, Ivana, Byers, Stephen W, Wheeler, Elizabeth K, Coleman, Matthew A, and Loots, Gabriela G
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Immunology ,Breast Cancer ,Cancer ,Aetiology ,2.1 Biological and endogenous factors ,cancer-associated fibroblasts ,breast cancer ,mammary fat pad ,gene expression profiling ,scRNA-seq ,CAF heterogeneity ,normal fibroblasts ,myofibroblasts ,inflammatory fibroblasts ,pancreatic cancer ,Oncology and carcinogenesis - Abstract
Cancer-associated fibroblasts (CAFs) are a prominent stromal cell type in solid tumors and molecules secreted by CAFs play an important role in tumor progression and metastasis. CAFs coexist as heterogeneous populations with potentially different biological functions. Although CAFs are a major component of the breast cancer stroma, molecular and phenotypic heterogeneity of CAFs in breast cancer is poorly understood. In this study, we investigated CAF heterogeneity in triple-negative breast cancer (TNBC) using a syngeneic mouse model, BALB/c-derived 4T1 mammary tumors. Using single-cell RNA sequencing (scRNA-seq), we identified six CAF subpopulations in 4T1 tumors including: 1) myofibroblastic CAFs, enriched for α-smooth muscle actin and several other contractile proteins; 2) 'inflammatory' CAFs with elevated expression of inflammatory cytokines; and 3) a CAF subpopulation expressing major histocompatibility complex (MHC) class II proteins that are generally expressed in antigen-presenting cells. Comparison of 4T1-derived CAFs to CAFs from pancreatic cancer revealed that these three CAF subpopulations exist in both tumor types. Interestingly, cells with inflammatory and MHC class II-expressing CAF profiles were also detected in normal breast/pancreas tissue, suggesting that these phenotypes are not tumor microenvironment-induced. This work enhances our understanding of CAF heterogeneity, and specifically targeting these CAF subpopulations could be an effective therapeutic approach for treating highly aggressive TNBCs.
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- 2020
26. Comparative Molecular Analysis of Cancer Behavior Cultured In Vitro, In Vivo, and Ex Vivo
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Hum, Nicholas R, Sebastian, Aimy, Gilmore, Sean F, He, Wei, Martin, Kelly A, Hinckley, Aubree, Dubbin, Karen R, Moya, Monica L, Wheeler, Elizabeth K, Coleman, Matthew A, and Loots, Gabriela G
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Immunology ,Human Genome ,Genetics ,Cancer ,Cancer Genomics ,Breast Cancer ,Women's Health ,2.1 Biological and endogenous factors ,5.9 Resources and infrastructure (treatment development) ,syngeneic culture ,PDX ,spheroid ,tumoroid ,monolayer culture ,RNA-seq ,TNBC ,4T1 ,single-cell RNA-seq ,EMT ,Oncology and carcinogenesis - Abstract
Current pre-clinical models of cancer fail to recapitulate the cancer cell behavior in primary tumors primarily because of the lack of a deeper understanding of the effects that the microenvironment has on cancer cell phenotype. Transcriptomic profiling of 4T1 murine mammary carcinoma cells from 2D and 3D cultures, subcutaneous or orthotopic allografts (from immunocompetent or immunodeficient mice), as well as ex vivo tumoroids, revealed differences in molecular signatures including altered expression of genes involved in cell cycle progression, cell signaling and extracellular matrix remodeling. The 3D culture platforms had more in vivo-like transcriptional profiles than 2D cultures. In vivo tumors had more cells undergoing epithelial-to-mesenchymal transition (EMT) while in vitro cultures had cells residing primarily in an epithelial or mesenchymal state. Ex vivo tumoroids incorporated aspects of in vivo and in vitro culturing, retaining higher abundance of cells undergoing EMT while shifting cancer cell fate towards a more mesenchymal state. Cellular heterogeneity surveyed by scRNA-seq revealed that ex vivo tumoroids, while rapidly expanding cancer and fibroblast populations, lose a significant proportion of immune components. This study emphasizes the need to improve in vitro culture systems and preserve syngeneic-like tumor composition by maintaining similar EMT heterogeneity as well as inclusion of stromal subpopulations.
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- 2020
27. Manipulation of the Gut Microbiome Alters Acetaminophen Biodisposition in Mice
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Malfatti, Michael A, Kuhn, Edward A, Murugesh, Deepa K, Mendez, Melanie E, Hum, Nicholas, Thissen, James B, Jaing, Crystal J, and Loots, Gabriela G
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Ecological Applications ,Biomedical and Clinical Sciences ,Biological Sciences ,Microbiology ,Environmental Sciences ,Vaccine Related ,5.1 Pharmaceuticals ,Development of treatments and therapeutic interventions ,Acetaminophen ,Administration ,Oral ,Amoxicillin ,Ampicillin ,Animals ,Anti-Bacterial Agents ,Drug Interactions ,Gastrointestinal Microbiome ,Male ,Metabolomics ,Mice ,Mice ,Inbred C57BL ,Neomycin ,Tissue Distribution ,Urine - Abstract
The gut microbiota is a vast and diverse microbial community that has co-evolved with its host to perform a variety of essential functions involved in the utilization of nutrients and the processing of xenobiotics. Shifts in the composition of gut microbiota can disturb the balance of organisms which can influence the biodisposition of orally administered drugs. To determine how changes in the gut microbiome can alter drug disposition, the pharmacokinetics (PK), and biodistribution of acetaminophen were assessed in C57Bl/6 mice after treatment with the antibiotics ciprofloxacin, amoxicillin, or a cocktail of ampicillin/neomycin. Altered PK, and excretion profiles of acetaminophen were observed in antibiotic exposed animals. Plasma Cmax was significantly decreased in antibiotic treated animals suggesting decreased bioavailability. Urinary metabolite profiles revealed decreases in acetaminophen-sulfate metabolite levels in both the amoxicillin and ampicillin/neomycin treated animals. The ratio between urinary and fecal excretion was also altered in antibiotic treated animals. Analysis of gut microbe composition revealed that changes in microbe content in antibiotic treated animals was associated with changes in acetaminophen biodisposition. These results suggest that exposure to amoxicillin or ampicillin/neomycin can alter the biodisposition of acetaminophen and that these alterations could be due to changes in gut microbiome composition.
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- 2020
28. Functional and transcriptional characterization of complex neuronal co-cultures
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Enright, Heather A, Lam, Doris, Sebastian, Aimy, Sales, Ana Paula, Cadena, Jose, Hum, Nicholas R, Osburn, Joanne J, Peters, Sandra KG, Petkus, Bryan, Soscia, David A, Kulp, Kristen S, Loots, Gabriela G, Wheeler, Elizabeth K, and Fischer, Nicholas O
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Biomedical and Clinical Sciences ,Neurosciences ,Brain Disorders ,Biotechnology ,Neurodegenerative ,1.1 Normal biological development and functioning ,Underpinning research ,Neurological ,Animals ,Astrocytes ,Cells ,Cultured ,Coculture Techniques ,Gene Expression Profiling ,Gene Regulatory Networks ,Lab-On-A-Chip Devices ,Neurogenesis ,Oligodendroglia ,Rats ,Sequence Analysis ,RNA ,Single-Cell Analysis ,Synaptophysin - Abstract
Brain-on-a-chip systems are designed to simulate brain activity using traditional in vitro cell culture on an engineered platform. It is a noninvasive tool to screen new drugs, evaluate toxicants, and elucidate disease mechanisms. However, successful recapitulation of brain function on these systems is dependent on the complexity of the cell culture. In this study, we increased cellular complexity of traditional (simple) neuronal cultures by co-culturing with astrocytes and oligodendrocyte precursor cells (complex culture). We evaluated and compared neuronal activity (e.g., network formation and maturation), cellular composition in long-term culture, and the transcriptome of the two cultures. Compared to simple cultures, neurons from complex co-cultures exhibited earlier synapse and network development and maturation, which was supported by localized synaptophysin expression, up-regulation of genes involved in mature neuronal processes, and synchronized neural network activity. Also, mature oligodendrocytes and reactive astrocytes were only detected in complex cultures upon transcriptomic analysis of age-matched cultures. Functionally, the GABA antagonist bicuculline had a greater influence on bursting activity in complex versus simple cultures. Collectively, the cellular complexity of brain-on-a-chip systems intrinsically develops cell type-specific phenotypes relevant to the brain while accelerating the maturation of neuronal networks, important features underdeveloped in traditional cultures.
- Published
- 2020
29. Modulation of Radiation Biomarkers in a Randomized Phase II Study of 131I-MIBG With or Without Radiation Sensitizers for Relapsed or Refractory Neuroblastoma
- Author
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Campbell, Kevin, Groshen, Susan, Evans, Angela C., Wilson, Stephen, Sebastian, Aimy, Loots, Gabriela G., Marachelian, Araz, Armant, Myriam, Pal, Sharmistha, Haas-Kogan, Daphne A., Park, Julie R., Granger, Meaghan, Matthay, Katherine K., Coleman, Matthew A., and DuBois, Steven G.
- Published
- 2023
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- View/download PDF
30. Differential bone adaptation to mechanical unloading and reloading in young, old, and osteocyte deficient mice
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Cunningham, Hailey C., Orr, Sophie, Murugesh, Deepa K., Hsia, Allison W., Osipov, Benjamin, Go, Lauren, Wu, Po Hung, Wong, Alice, Loots, Gabriela G., Kazakia, Galateia J., and Christiansen, Blaine A.
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- 2023
- Full Text
- View/download PDF
31. Host tracheal and intestinal microbiomes inhibit Coccidioides growth in vitro
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Tejeda-Garibay, Susana, primary, Zhao, Lihong, additional, Hum, Nicholas R., additional, Pimentel, Maria, additional, Diep, Anh L., additional, Amiri, Beheshta, additional, Sindi, Suzanne S., additional, Weilhammer, Dina R., additional, Loots, Gabriela G., additional, and Hoyer, Katrina K., additional
- Published
- 2024
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32. Isolation of Murine Articular Chondrocytes for Single-Cell RNA or Bulk RNA Sequencing Analysis
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McCool, Jillian L., primary, Hum, Nicholas R., additional, Sebastian, Aimy, additional, and Loots, Gabriela G., additional
- Published
- 2022
- Full Text
- View/download PDF
33. Methionine Adenosyltransferase 1a (MAT1A) Enhances Cell Survival During Chemotherapy Treatment and is Associated with Drug Resistance in Bladder Cancer PDX Mice.
- Author
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Martin, Kelly A, Hum, Nicholas R, Sebastian, Aimy, He, Wei, Siddiqui, Salma, Ghosh, Paramita M, Pan, Chong-Xian, de Vere White, Ralph, and Loots, Gabriela G
- Subjects
Cell Line ,Tumor ,Animals ,Humans ,Mice ,Disease Models ,Animal ,Methionine Adenosyltransferase ,Antineoplastic Agents ,Xenograft Model Antitumor Assays ,Gene Expression Profiling ,Cell Proliferation ,Cell Survival ,Gene Expression Regulation ,Neoplastic ,Drug Resistance ,Neoplasm ,Urinary Bladder Neoplasms ,Transcriptome ,bladder cancer ,drug resistance ,gemcitabine ,methyltransferase ,Cell Line ,Tumor ,Disease Models ,Animal ,Gene Expression Regulation ,Neoplastic ,Drug Resistance ,Neoplasm ,Other Chemical Sciences ,Genetics ,Other Biological Sciences ,Chemical Physics - Abstract
Bladder cancer is among the top ten most common cancers, with about ~380,000 new cases and ~150,000 deaths per year worldwide. Tumor relapse following chemotherapy treatment has long been a significant challenge towards completely curing cancer. We have utilized a patient-derived bladder cancer xenograft (PDX) platform to characterize molecular mechanisms that contribute to relapse following drug treatment in advanced bladder cancer. Transcriptomic profiling of bladder cancer xenograft tumors by RNA-sequencing analysis, before and after relapse, following a 21-day cisplatin/gemcitabine drug treatment regimen identified methionine adenosyltransferase 1a (MAT1A) as one of the significantly upregulated genes following drug treatment. Survey of patient tumor sections confirmed elevated levels of MAT1A in individuals who received chemotherapy. Overexpression of MAT1A in 5637 bladder cancer cells increased tolerance to gemcitabine and stalled cell proliferation rates, suggesting MAT1A upregulation as a potential mechanism by which bladder cancer cells persist in a quiescent state to evade chemotherapy.
- Published
- 2019
34. Lrp4 Mediates Bone Homeostasis and Mechanotransduction through Interaction with Sclerostin In Vivo
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Bullock, Whitney A, Hoggatt, April M, Horan, Daniel J, Elmendorf, Andrew J, Sato, Amy Y, Bellido, Teresita, Loots, Gabriela G, Pavalko, Fredrick M, and Robling, Alexander G
- Subjects
Biomedical and Clinical Sciences ,Clinical Sciences ,Osteoporosis ,2.1 Biological and endogenous factors ,Aetiology ,Biological Sciences ,Cell Biology ,Molecular Biology - Abstract
Wnt signaling plays a key role in regulating bone remodeling. In vitro studies suggest that sclerostin's inhibitory action on Lrp5 is facilitated by the membrane-associated receptor Lrp4. We generated an Lrp4 R1170W knockin mouse model (Lrp4KI), based on a published mutation in patients with high bone mass (HBM). Lrp4KI mice have an HBM phenotype (assessed radiographically), including increased bone strength and formation. Overexpression of a Sost transgene had osteopenic effects in Lrp4-WT but not Lrp4KI mice. Conversely, sclerostin inhibition had blunted osteoanabolic effects in Lrp4KI mice. In a disuse-induced bone wasting model, Lrp4KI mice exhibit significantly less bone loss than wild-type (WT) mice. In summary, mice harboring the Lrp4-R1170W missense mutation recapitulate the human HBM phenotype, are less sensitive to altered sclerostin levels, and are protected from disuse-induced bone loss. Lrp4 is an attractive target for pharmacological targeting aimed at increasing bone mass and preventing bone loss due to disuse.
- Published
- 2019
35. Expression of a Degradation‐Resistant β‐Catenin Mutant in Osteocytes Protects the Skeleton From Mechanodeprivation‐Induced Bone Wasting
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Bullock, Whitney A, Hoggatt, April M, Horan, Daniel J, Lewis, Karl J, Yokota, Hiroki, Hann, Steven, Warman, Matthew L, Sebastian, Aimy, Loots, Gabriela G, Pavalko, Fredrick M, and Robling, Alexander G
- Subjects
Osteoporosis ,2.1 Biological and endogenous factors ,Aetiology ,Musculoskeletal ,Animals ,Bone Density ,Mechanotransduction ,Cellular ,Mice ,Mice ,Transgenic ,Osteocytes ,Osteogenesis ,Tibia ,X-Ray Microtomography ,beta Catenin ,beta-CATENIN ,CTNNB1 ,WNT ,DISUSE ,OSTEOPOROSIS ,β-CATENIN ,Biological Sciences ,Engineering ,Medical and Health Sciences ,Anatomy & Morphology - Abstract
Mechanical stimulation is a key regulator of bone mass, maintenance, and turnover. Wnt signaling is a key regulator of mechanotransduction in bone, but the role of β-catenin-an intracellular signaling node in the canonical Wnt pathway-in disuse mechanotransduction is not defined. Using the β-catenin exon 3 flox (constitutively active [CA]) mouse model, in conjunction with a tamoxifen-inducible, osteocyte-selective Cre driver, we evaluated the effects of degradation-resistant β-catenin on bone properties during disuse. We hypothesized that if β-catenin plays an important role in Wnt-mediated osteoprotection, then artificial stabilization of β-catenin in osteocytes would protect the limbs from disuse-induced bone wasting. Two disuse models were tested: tail suspension, which models fluid shift, and botulinum-toxin (botox)-induced muscle paralysis, which models loss of muscle force. Tail suspension was associated with a significant loss of tibial bone mass and density, reduced architectural properties, and decreased bone formation indices in uninduced (control) mice, as assessed by dual-energy X-ray absorptiometry (DXA), micro-computed tomography (µCT), and histomorphometry. Activation of the βcatCA allele in tail-suspended mice resulted in little to no change in those properties; ie, these mice were protected from bone loss. Similar protective effects were observed among botox-treated mice when the βcatCA was activated. RNAseq analysis of altered gene regulation in tail-suspended mice yielded 35 genes, including Wnt11, Gli1, Nell1, Gdf5, and Pgf, which were significantly differentially regulated between tail-suspended β-catenin stabilized mice and tail-suspended nonstabilized mice. Our findings indicate that selectively targeting/blocking of β-catenin degradation in bone cells could have therapeutic implications in mechanically induced bone disease. © 2019 American Society for Bone and Mineral Research.
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- 2019
36. The Sustained Induction of c-MYC Drives Nab-Paclitaxel Resistance in Primary Pancreatic Ductal Carcinoma Cells
- Author
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Parasido, Erika, Avetian, George S, Naeem, Aisha, Graham, Garrett, Pishvaian, Michael, Glasgow, Eric, Mudambi, Shaila, Lee, Yichien, Ihemelandu, Chukwuemeka, Choudhry, Muhammad, Peran, Ivana, Banerjee, Partha P, Avantaggiati, Maria Laura, Bryant, Kirsten, Baldelli, Elisa, Pierobon, Mariaelena, Liotta, Lance, Petricoin, Emanuel, Fricke, Stanley T, Sebastian, Aimy, Cozzitorto, Joseph, Loots, Gabriela G, Kumar, Deepak, Byers, Stephen, Londin, Eric, DiFeo, Analisa, Narla, Goutham, Winter, Jordan, Brody, Jonathan R, Rodriguez, Olga, and Albanese, Chris
- Subjects
Cancer ,Pancreatic Cancer ,Digestive Diseases ,Orphan Drug ,Rare Diseases ,Development of treatments and therapeutic interventions ,5.1 Pharmaceuticals ,Aged ,Aged ,80 and over ,Albumins ,Animals ,Carcinoma ,Pancreatic Ductal ,Drug Resistance ,Neoplasm ,Female ,Gene Expression Regulation ,Neoplastic ,Humans ,Male ,Mice ,Neoplasm Transplantation ,Paclitaxel ,Pancreatic Neoplasms ,Primary Cell Culture ,Proto-Oncogene Proteins c-myc ,Tumor Cells ,Cultured ,Up-Regulation ,Zebrafish ,Oncology and Carcinogenesis ,Developmental Biology ,Oncology & Carcinogenesis - Abstract
Pancreatic ductal adenocarcinoma (PDAC) is a highly aggressive disease with limited and, very often, ineffective medical and surgical therapeutic options. The treatment of patients with advanced unresectable PDAC is restricted to systemic chemotherapy, a therapeutic intervention to which most eventually develop resistance. Recently, nab-paclitaxel (n-PTX) has been added to the arsenal of first-line therapies, and the combination of gemcitabine and n-PTX has modestly prolonged median overall survival. However, patients almost invariably succumb to the disease, and little is known about the mechanisms underlying n-PTX resistance. Using the conditionally reprogrammed (CR) cell approach, we established and verified continuously growing cell cultures from treatment-naïve patients with PDAC. To study the mechanisms of primary drug resistance, nab-paclitaxel-resistant (n-PTX-R) cells were generated from primary cultures and drug resistance was verified in vivo, both in zebrafish and in athymic nude mouse xenograft models. Molecular analyses identified the sustained induction of c-MYC in the n-PTX-R cells. Depletion of c-MYC restored n-PTX sensitivity, as did treatment with either the MEK inhibitor, trametinib, or a small-molecule activator of protein phosphatase 2a. IMPLICATIONS: The strategies we have devised, including the patient-derived primary cells and the unique, drug-resistant isogenic cells, are rapid and easily applied in vitro and in vivo platforms to better understand the mechanisms of drug resistance and for defining effective therapeutic options on a patient by patient basis.
- Published
- 2019
37. Radiocarbon Tracers in Toxicology and Medicine: Recent Advances in Technology and Science.
- Author
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Malfatti, Michael A, Buchholz, Bruce A, Enright, Heather A, Stewart, Benjamin J, Ognibene, Ted J, McCartt, A Daniel, Loots, Gabriela G, Zimmermann, Maike, Scharadin, Tiffany M, Cimino, George D, Jonas, Brian A, Pan, Chong-Xian, Bench, Graham, Henderson, Paul T, and Turteltaub, Kenneth W
- Subjects
DNA adducts ,accelerator mass spectrometry ,benzo[a]pyrene ,biomarkers ,cavity ring down spectrophotometry ,cell turnover ,metastasis ,naphthalene ,radiocarbon ,triclocarban - Abstract
This review summarizes recent developments in radiocarbon tracer technology and applications. Technologies covered include accelerator mass spectrometry (AMS), including conversion of samples to graphite, and rapid combustion to carbon dioxide to enable direct liquid sample analysis, coupling to HPLC for real-time AMS analysis, and combined molecular mass spectrometry and AMS for analyte identification and quantitation. Laser-based alternatives, such as cavity ring down spectrometry, are emerging to enable lower cost, higher throughput measurements of biological samples. Applications covered include radiocarbon dating, use of environmental atomic bomb pulse radiocarbon content for cell and protein age determination and turnover studies, and carbon source identification. Low dose toxicology applications reviewed include studies of naphthalene-DNA adduct formation, benzo[a]pyrene pharmacokinetics in humans, and triclocarban exposure and risk assessment. Cancer-related studies covered include the use of radiocarbon-labeled cells for better defining mechanisms of metastasis and the use of drug-DNA adducts as predictive biomarkers of response to chemotherapy.
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- 2019
38. Regional Control of Hairless versus Hair-Bearing Skin by Dkk2
- Author
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Song, Yaolin, Boncompagni, Ana C, Kim, Sang-Seok, Gochnauer, Heather R, Zhang, Yuhang, Loots, Gabriela G, Wu, Dianqing, Li, Yulin, Xu, Mingang, and Millar, Sarah E
- Subjects
Biological Sciences ,Stem Cell Research ,Stem Cell Research - Nonembryonic - Non-Human ,1.1 Normal biological development and functioning ,Underpinning research ,Skin ,Animals ,Animals ,Newborn ,Biomarkers ,Cell Differentiation ,Dermis ,Embryo ,Mammalian ,Embryonic Development ,Hair Follicle ,Intercellular Signaling Peptides and Proteins ,Mice ,Hairless ,Mice ,Inbred C57BL ,Rabbits ,Stem Cells ,Up-Regulation ,Wnt Signaling Pathway ,Dickkopf 2 ,Wnt ,hair follicle ,hairless skin ,mouse mutant ,plantar skin ,rabbit embryo ,secreted Wnt inhibitor ,skin development ,skin patterning ,Biochemistry and Cell Biology ,Medical Physiology ,Biological sciences - Abstract
Haired skin is a defining characteristic of mammals. However, some specialized skin regions, such as human palms, soles and ventral wrist, and mouse plantar foot, are entirely hairless. Using mouse plantar skin as a model system, we show that the endogenous secreted Wnt inhibitor DKK2 suppresses plantar hair follicle development and permits the formation of hairless skin. Plantar skin retains all of the mechanistic components needed for hair follicle development, as genetic deletion of Dkk2 permits formation of fully functional plantar hair follicles that give rise to external hair, contain sebaceous glands and a stem cell compartment, and undergo regenerative growth. In the absence of Dkk2, Wnt/β-catenin signaling activity is initially broadly elevated in embryonic plantar skin and gradually becomes patterned, mimicking follicular development in normally haired areas. These data provide a paradigm in which regionally restricted expression of a Wnt inhibitor underlies specification of hairless versus hairy skin.
- Published
- 2018
39. Extracellular matrix modulates T cell clearance of malignant cells in vitro
- Author
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Robertson, Claire, Sebastian, Aimy, Hinckley, Aubree, Rios-Arce, Naiomy D., Hynes, William F., Edwards, Skye A., He, Wei, Hum, Nicholas R., Wheeler, Elizabeth K., Loots, Gabriela G., Coleman, Matthew A., and Moya, Monica L.
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- 2022
- Full Text
- View/download PDF
40. Vhl deficiency in osteocytes produces high bone mass and hematopoietic defects.
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Loots, Gabriela G, Robling, Alexander G, Chang, Jiun C, Murugesh, Deepa K, Bajwa, Jamila, Carlisle, Cameron, Manilay, Jennifer O, Wong, Alice, Yellowley, Clare E, and Genetos, Damian C
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Bone and Bones ,Osteocytes ,Animals ,Mice ,Inbred C57BL ,Organ Size ,Hematopoiesis ,Lymphopoiesis ,Gene Deletion ,Von Hippel-Lindau Tumor Suppressor Protein ,Hypoxia-Inducible Factor 1 ,alpha Subunit ,Wnt Signaling Pathway ,Cancellous Bone ,Cortical Bone ,Hypoxia-inducible factor ,Osteocyte ,Sclerostin ,Wnt ,von Hippel-Landau ,2.1 Biological and endogenous factors ,Aetiology ,Biological Sciences ,Engineering ,Medical and Health Sciences ,Endocrinology & Metabolism - Abstract
Tissue oxygen (O2) levels vary during development and disease; adaptations to decreased O2 (hypoxia) are mediated by hypoxia-inducible factor (HIF) transcription factors. HIFs are active in the skeleton, and stabilizing HIF-α isoforms cause high bone mass (HBM) phenotypes. A fundamental limitation of previous studies examining the obligate role for HIF-α isoforms in the skeleton involves the persistence of gene deletion as osteolineage cells differentiate into osteocytes. Because osteocytes orchestrate skeletal development and homeostasis, we evaluated the influence of Vhl or Hif1a disruption in osteocytes. Osteocytic Vhl deletion caused HBM phenotype, but Hif1a was dispensable in osteocytes. Vhl cKO mice revealed enhanced canonical Wnt signaling. B cell development was reduced while myelopoiesis increased in osteocytic Vhl cKO, revealing a novel influence of Vhl/HIF-α function in osteocytes on maintenance of bone microarchitecture via canonical Wnt signaling and effects on hematopoiesis.
- Published
- 2018
41. Conditional Deletion of Sost in MSC‐Derived Lineages Identifies Specific Cell‐Type Contributions to Bone Mass and B‐Cell Development
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Yee, Cristal S, Manilay, Jennifer O, Chang, Jiun C, Hum, Nicholas R, Murugesh, Deepa K, Bajwa, Jamila, Mendez, Melanie E, Economides, Aris E, Horan, Daniel J, Robling, Alexander G, and Loots, Gabriela G
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Biomedical and Clinical Sciences ,Clinical Sciences ,Stem Cell Research ,Stem Cell Research - Nonembryonic - Non-Human ,Osteoporosis ,Musculoskeletal ,Adaptor Proteins ,Signal Transducing ,Animals ,B-Lymphocytes ,Bone Marrow ,Cancellous Bone ,Cell Lineage ,Collagen Type X ,Extracellular Matrix Proteins ,Female ,Femur ,Gene Deletion ,Glycoproteins ,Homeodomain Proteins ,Integrases ,Intercellular Signaling Peptides and Proteins ,Lumbar Vertebrae ,Lymphocytes ,Mesenchymal Stem Cells ,Mice ,Inbred C57BL ,Organ Size ,Osteoblasts ,Osteogenesis ,Phenotype ,X-Ray Microtomography ,SCLEROSTIN ,MSC ,OSTEOBLAST ,OSTEOCYTE ,CHONDROCYTE ,WnT SIGNALING ,WnT ,Biological Sciences ,Engineering ,Medical and Health Sciences ,Anatomy & Morphology ,Biological sciences ,Biomedical and clinical sciences - Abstract
Sclerostin (Sost) is a negative regulator of bone formation and blocking its function via antibodies has shown great therapeutic promise by increasing both bone mass in humans and animal models. Sclerostin deletion in Sost KO mice (Sost-/- ) causes high bone mass (HBM) similar to sclerosteosis patients. Sost-/- mice have been shown to display an up to 300% increase in bone volume/total volume (BV/TV), relative to age-matched controls. It has been postulated that the main source of skeletal sclerostin is the osteocyte. To understand the cell-type specific contributions to the HBM phenotype described in Sost-/- mice, as well as to address the endocrine and paracrine mode of action of sclerostin, we examined the skeletal phenotypes of conditional Sost loss-of-function (SostiCOIN/iCOIN ) mice with specific deletions in (1) the limb mesenchyme (Prx1-Cre; targets osteoprogenitors and their progeny); (2) midstage osteoblasts and their progenitors (Col1-Cre); (3) mature osteocytes (Dmp1-Cre); and (4) hypertrophic chondrocytes and their progenitors (ColX-Cre). All conditional alleles resulted in significant increases in bone mass in trabecular bone in both the femur and lumbar vertebrae, but only Prx1-Cre deletion fully recapitulated the amplitude of the HBM phenotype in the appendicular skeleton and the B-cell defect described in the global KO. Despite WT expression of Sost in the axial skeleton of Prx1-Cre deleted mice, these mice also had a significant increase in bone mass in the vertebrae, but the sclerostin released in circulation by the axial skeleton did not affect bone parameters in the appendicular skeleton. Also, both Col1 and Dmp1 deletion resulted in a similar 80% significant increase in trabecular bone mass, but only Col1 and Prx1 deletion resulted in a significant increase in cortical thickness. We conclude that several cell types within the Prx1-osteoprogenitor-derived lineages contribute significant amounts of sclerostin protein to the paracrine pool of Sost in bone. © 2018 The Authors. Journal of Bone and Mineral Research Published by Wiley Periodicals, Inc.
- Published
- 2018
42. Comparative Transcriptomics Identifies Novel Genes and Pathways Involved in Post-Traumatic Osteoarthritis Development and Progression.
- Author
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Sebastian, Aimy, Chang, Jiun C, Mendez, Melanie E, Murugesh, Deepa K, Hatsell, Sarah, Economides, Aris N, Christiansen, Blaine A, and Loots, Gabriela G
- Subjects
Cartilage ,Articular ,Animals ,Mice ,Inbred C57BL ,Osteoarthritis ,Disease Progression ,Metalloproteases ,Cytokines ,Up-Regulation ,Transcriptome ,Anterior Cruciate Ligament Injuries ,ACL injury ,B4galnt2 ,C57BL/6J ,MRL/MpJ ,PTOA ,RNA-seq ,STR/ort ,inflammation ,osteoarthritis ,regeneration ,Cartilage ,Articular ,Mice ,Inbred C57BL ,Other Chemical Sciences ,Genetics ,Other Biological Sciences ,Chemical Physics - Abstract
Anterior cruciate ligament (ACL) injuries often result in post-traumatic osteoarthritis (PTOA). To better understand the molecular mechanisms behind PTOA development following ACL injury, we profiled ACL injury-induced transcriptional changes in knee joints of three mouse strains with varying susceptibility to OA: STR/ort (highly susceptible), C57BL/6J (moderately susceptible) and super-healer MRL/MpJ (not susceptible). Right knee joints of the mice were injured using a non-invasive tibial compression injury model and global gene expression was quantified before and at 1-day, 1-week, and 2-weeks post-injury using RNA-seq. Following injury, injured and uninjured joints of STR/ort and injured C57BL/6J joints displayed significant cartilage degeneration while MRL/MpJ had little cartilage damage. Gene expression analysis suggested that prolonged inflammation and elevated catabolic activity in STR/ort injured joints, compared to the other two strains may be responsible for the severe PTOA phenotype observed in this strain. MRL/MpJ had the lowest expression values for several inflammatory cytokines and catabolic enzymes activated in response to ACL injury. Furthermore, we identified several genes highly expressed in MRL/MpJ compared to the other two strains including B4galnt2 and Tpsab1 which may contribute to enhanced healing in the MRL/MpJ. Overall, this study has increased our knowledge of early molecular changes associated with PTOA development.
- Published
- 2018
43. Sclerostin neutralization unleashes the osteoanabolic effects of Dkk1 inhibition
- Author
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Witcher, Phillip C, Miner, Sara E, Horan, Daniel J, Bullock, Whitney A, Lim, Kyung-Eun, Kang, Kyung Shin, Adaniya, Alison L, Ross, Ryan D, Loots, Gabriela G, and Robling, Alexander G
- Subjects
Aging ,Osteoporosis ,Clinical Research ,Aetiology ,2.1 Biological and endogenous factors ,Musculoskeletal ,Adaptor Proteins ,Signal Transducing ,Anabolic Agents ,Animals ,Antibodies ,Neutralizing ,Bone Morphogenetic Proteins ,Disease Models ,Animal ,Female ,Femur ,Genetic Markers ,Glycoproteins ,Humans ,Hyperostosis ,Intercellular Signaling Peptides and Proteins ,Loss of Function Mutation ,Male ,Mice ,Osteocytes ,Osteogenesis ,Spine ,Syndactyly ,Treatment Outcome ,Up-Regulation ,Wnt Signaling Pathway ,X-Ray Microtomography ,Bone Biology ,Osteoclast/osteoblast biology ,Therapeutics - Abstract
The WNT pathway has become an attractive target for skeletal therapies. High-bone-mass phenotypes in patients with loss-of-function mutations in the LRP5/6 inhibitor Sost (sclerosteosis), or in its downstream enhancer region (van Buchem disease), highlight the utility of targeting Sost/sclerostin to improve bone properties. Sclerostin-neutralizing antibody is highly osteoanabolic in animal models and in human clinical trials, but antibody-based inhibition of another potent LRP5/6 antagonist, Dkk1, is largely inefficacious for building bone in the unperturbed adult skeleton. Here, we show that conditional deletion of Dkk1 from bone also has negligible effects on bone mass. Dkk1 inhibition increases Sost expression, suggesting a potential compensatory mechanism that might explain why Dkk1 suppression lacks anabolic action. To test this concept, we deleted Sost from osteocytes in, or administered sclerostin neutralizing antibody to, mice with a Dkk1-deficient skeleton. A robust anabolic response to Dkk1 deletion was manifest only when Sost/sclerostin was impaired. Whole-body DXA scans, μCT measurements of the femur and spine, histomorphometric measures of femoral bone formation rates, and biomechanical properties of whole bones confirmed the anabolic potential of Dkk1 inhibition in the absence of sclerostin. Further, combined administration of sclerostin and Dkk1 antibody in WT mice produced a synergistic effect on bone gain that greatly exceeded individual or additive effects of the therapies, confirming the therapeutic potential of inhibiting multiple WNT antagonists for skeletal health. In conclusion, the osteoanabolic effects of Dkk1 inhibition can be realized if sclerostin upregulation is prevented. Anabolic therapies for patients with low bone mass might benefit from a strategy that accounts for the compensatory milieu of WNT inhibitors in bone tissue.
- Published
- 2018
44. SOST/Sclerostin Improves Posttraumatic Osteoarthritis and Inhibits MMP2/3 Expression After Injury
- Author
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Chang, Jiun C, Christiansen, Blaine A, Murugesh, Deepa K, Sebastian, Aimy, Hum, Nicholas R, Collette, Nicole M, Hatsell, Sarah, Economides, Aris N, Blanchette, Craig D, and Loots, Gabriela G
- Subjects
Biomedical and Clinical Sciences ,Clinical Sciences ,Aging ,Osteoarthritis ,Prevention ,Arthritis ,Physical Injury - Accidents and Adverse Effects ,Aetiology ,2.1 Biological and endogenous factors ,Musculoskeletal ,Adaptor Proteins ,Signal Transducing ,Animals ,Anterior Cruciate Ligament Injuries ,Binding Sites ,Bone Morphogenetic Proteins ,Extracellular Matrix ,Genetic Markers ,Glycoproteins ,Humans ,Intercellular Signaling Peptides and Proteins ,Matrix Metalloproteinase 2 ,Matrix Metalloproteinase 3 ,Mice ,Inbred C57BL ,Models ,Biological ,NF-kappa B ,Osteoarthritis ,Knee ,Osteophyte ,Phenotype ,Recombinant Proteins ,Tumor Necrosis Factor-alpha ,Up-Regulation ,OSTEOARTHRITIS ,SCLEROSTIN ,SOST ,MMP ,OSTEOPHYTE ,WNT SIGNALING ,Biological Sciences ,Engineering ,Medical and Health Sciences ,Anatomy & Morphology ,Biological sciences ,Biomedical and clinical sciences - Abstract
Patients with anterior cruciate ligament (ACL) rupture are two times as likely to develop posttraumatic osteoarthritis (PTOA). Annually, there are ∼900,000 knee injuries in the United States, which account for ∼12% of all osteoarthritis (OA) cases. PTOA leads to reduced physical activity, deconditioning of the musculoskeletal system, and in severe cases requires joint replacement to restore function. Therefore, treatments that would prevent cartilage degradation post-injury would provide attractive alternatives to surgery. Sclerostin (Sost), a Wnt antagonist and a potent negative regulator of bone formation, has recently been implicated in regulating chondrocyte function in OA. To determine whether elevated levels of Sost play a protective role in PTOA, we examined the progression of OA using a noninvasive tibial compression overload model in SOST transgenic (SOSTTG ) and knockout (Sost-/- ) mice. Here we report that SOSTTG mice develop moderate OA and display significantly less advanced PTOA phenotype at 16 weeks post-injury compared with wild-type (WT) controls and Sost-/- . In addition, SOSTTG built ∼50% and ∼65% less osteophyte volume than WT and Sost-/- , respectively. Quantification of metalloproteinase (MMP) activity showed that SOSTTG had ∼2-fold less MMP activation than WT or Sost-/- , and this was supported by a significant reduction in MMP2/3 protein levels, suggesting that elevated levels of SOST inhibit the activity of proteolytic enzymes known to degrade articular cartilage matrix. Furthermore, intra-articular administration of recombinant Sost protein, immediately post-injury, also significantly decreased MMP activity levels relative to PBS-treated controls, and Sost activation in response to injury was TNFα and NF-κB dependent. These results provide in vivo evidence that sclerostin functions as a protective molecule immediately after joint injury to prevent cartilage degradation. © 2018 The Authors. Journal of Bone and Mineral Research Published by Wiley Periodicals Inc.
- Published
- 2018
45. Shared and Unique Features Distinguishing Follicular T Helper and Regulatory Cells of Peripheral Lymph Node and Peyer’s Patches
- Author
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Georgiev, Hristo, Ravens, Inga, Papadogianni, Georgia, Halle, Stephan, Malissen, Bernard, Loots, Gabriela G, Förster, Reinhold, and Bernhardt, Günter
- Subjects
Biomedical and Clinical Sciences ,Immunology ,Genetics ,Animals ,Biomarkers ,CD4-Positive T-Lymphocytes ,Cytokines ,Gene Expression Profiling ,Immunophenotyping ,Lymph Nodes ,Lymphocyte Activation ,Mice ,Peyer's Patches ,Phenotype ,T-Lymphocytes ,Helper-Inducer ,T-Lymphocytes ,Regulatory ,Transcriptome ,follicular helper T cells ,follicular regulatory T cells ,lymph node ,Peyer's patch ,transcriptome ,germinal center ,Peyer’s patch ,Medical Microbiology ,Biochemistry and cell biology - Abstract
Follicular helper (TFH) and regulatory (TFR) cells are critical players in managing germinal center (GC) reactions that accomplish effective humoral immune responses. Transcriptome analyses were done comparing gene regulation of TFH and TFR cells isolated from Peyer's Patches (PP) and immunized peripheral lymph nodes (pLNs) revealing many regulatory patterns common to all follicular cells. However, in contrast to TFH cells, the upregulation or downregulation of many genes was attenuated substantially in pLN TFR cells when compared to those of PP. Additionally, PP but not pLN TFR cells were largely unresponsive to IL2 and expressed Il4 as well as Il21. Together with fundamental differences in gene expression that were found between cells of both compartments this emphasizes specific adaptations of follicular T cell functions to their micro-milieu. Moreover, although GL7 expression distinguishes matured follicular T cells, GL7+ as well as GL7- cells are present in the GC.
- Published
- 2018
46. Tracking Tumor Colonization in Xenograft Mouse Models Using Accelerator Mass Spectrometry
- Author
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Hum, Nicholas R, Martin, Kelly A, Malfatti, Michael A, Haack, Kurt, Buchholz, Bruce A, and Loots, Gabriela G
- Subjects
Biological Sciences ,Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Cancer ,Biotechnology ,Animals ,Carbon Isotopes ,Cell Tracking ,Disease Models ,Animal ,Humans ,Male ,Mass Spectrometry ,Mice ,Neoplasm Metastasis ,PC-3 Cells ,Prostatic Neoplasms ,Xenograft Model Antitumor Assays - Abstract
Here we introduce an Accelerator Mass Spectrometry (AMS)-based high precision method for quantifying the number of cancer cells that initiate metastatic tumors, in xenograft mice. Quantification of 14C per cell prior to injection into animals, and quantification of 14C in whole organs allows us to extrapolate the number of cancer cells available to initiate metastatic tumors. The 14C labeling was optimized such that 1 cancer cell was detected among 1 million normal cells. We show that ~1-5% of human cancer cells injected into immunodeficient mice form subcutaneous tumors, and even fewer cells initiate metastatic tumors. Comparisons of metastatic site colonization between a highly metastatic (PC3) and a non-metastatic (LnCap) cell line showed that PC3 cells colonize target tissues in greater quantities at 2 weeks post-delivery, and by 12 weeks post-delivery no 14C was detected in LnCap xenografts, suggesting that all metastatic cells were cleared. The 14C-signal correlated with the presence and the severity of metastatic tumors. AMS measurements of 14C-labeled cells provides a highly-sensitive, quantitative assay to experimentally evaluate metastasis and colonization of target tissues in xenograft mouse models. This approach can potentially be used to evaluate tumor aggressiveness and assist in making informed decisions regarding treatment.
- Published
- 2018
47. Global molecular changes in a tibial compression induced ACL rupture model of post‐traumatic osteoarthritis
- Author
-
Chang, Jiun C, Sebastian, Aimy, Murugesh, Deepa K, Hatsell, Sarah, Economides, Aris N, Christiansen, Blaine A, and Loots, Gabriela G
- Subjects
Arthritis ,Biotechnology ,Genetics ,Osteoarthritis ,Aging ,Physical Injury - Accidents and Adverse Effects ,2.1 Biological and endogenous factors ,Aetiology ,Musculoskeletal ,Animals ,Anterior Cruciate Ligament Injuries ,Disease Models ,Animal ,Gene Expression Profiling ,Male ,Mice ,Inbred C57BL ,Osteoarthritis ,Knee ,Phenotype ,osteoarthritis ,RNA sequencing ,tibial compression ,ACL ,Biomedical Engineering ,Clinical Sciences ,Human Movement and Sports Sciences ,Orthopedics - Abstract
Joint injury causes post-traumatic osteoarthritis (PTOA). About ∼50% of patients rupturing their anterior cruciate ligament (ACL) will develop PTOA within 1-2 decades of the injury, yet the mechanisms responsible for the development of PTOA after joint injury are not well understood. In this study, we examined whole joint gene expression by RNA sequencing (RNAseq) at 1 day, 1-, 6-, and 12 weeks post injury, in a non-invasive tibial compression (TC) overload mouse model of PTOA that mimics ACL rupture in humans. We identified 1446 genes differentially regulated between injured and contralateral joints. This includes known regulators of osteoarthritis such as MMP3, FN1, and COMP, and several new genes including Suco, Sorcs2, and Medag. We also identified 18 long noncoding RNAs that are differentially expressed in the injured joints. By comparing our data to gene expression data generated using the surgical destabilization of the medial meniscus (DMM) PTOA model, we identified several common genes and shared mechanisms. Our study highlights several differences between these two models and suggests that the TC model may be a more rapidly progressing model of PTOA. This study provides the first account of gene expression changes associated with PTOA development and progression in a TC model. © 2016 The Authors. Journal of Orthopaedic Research Published by Wiley Periodicals, Inc. J Orthop Res 35:474-485, 2017.
- Published
- 2017
48. Wnt co-receptors Lrp5 and Lrp6 differentially mediate Wnt3a signaling in osteoblasts
- Author
-
Sebastian, Aimy, Hum, Nicholas R, Murugesh, Deepa K, Hatsell, Sarah, Economides, Aris N, and Loots, Gabriela G
- Subjects
Aging ,Osteoporosis ,1.1 Normal biological development and functioning ,Underpinning research ,Animals ,Bone and Bones ,Cell Differentiation ,Down-Regulation ,Gene Expression Profiling ,Gene Ontology ,Low Density Lipoprotein Receptor-Related Protein-5 ,Low Density Lipoprotein Receptor-Related Protein-6 ,Mice ,Knockout ,Osteoblasts ,Osteogenesis ,Phenotype ,Receptors ,Wnt ,Signal Transduction ,Transcriptome ,Up-Regulation ,Wnt3A Protein ,General Science & Technology - Abstract
Wnt3a is a major regulator of bone metabolism however, very few of its target genes are known in bone. Wnt3a preferentially signals through transmembrane receptors Frizzled and co-receptors Lrp5/6 to activate the canonical signaling pathway. Previous studies have shown that the canonical Wnt co-receptors Lrp5 and Lrp6 also play an essential role in normal postnatal bone homeostasis, yet, very little is known about specific contributions by these co-receptors in Wnt3a-dependent signaling. We used high-throughput sequencing technology to identify target genes regulated by Wnt3a in osteoblasts and to elucidate the role of Lrp5 and Lrp6 in mediating Wnt3a signaling. Our study identified 782 genes regulated by Wnt3a in primary calvarial osteoblasts. Wnt3a up-regulated the expression of several key regulators of osteoblast proliferation/ early stages of differentiation while inhibiting genes expressed in later stages of osteoblastogenesis. We also found that Lrp6 is the key mediator of Wnt3a signaling in osteoblasts and Lrp5 played a less significant role in mediating Wnt3a signaling.
- Published
- 2017
49. Maternal exposure to an environmentally relevant dose of triclocarban results in perinatal exposure and potential alterations in offspring development in the mouse model
- Author
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Enright, Heather A, Falso, Miranda JS, Malfatti, Michael A, Lao, Victoria, Kuhn, Edward A, Hum, Nicholas, Shi, Yilan, Sales, Ana Paula, Haack, Kurt W, Kulp, Kristen S, Buchholz, Bruce A, Loots, Gabriela G, Bench, Graham, and Turteltaub, Kenneth W
- Subjects
Biomedical and Clinical Sciences ,Environmental Sciences ,Pollution and Contamination ,Nutrition ,Pediatric ,Reproductive health and childbirth ,Animals ,Carbanilides ,Female ,Gene Expression ,Gene Expression Regulation ,Lipid Metabolism ,Liver ,Male ,Maternal Exposure ,Mice ,Pregnancy ,Prenatal Exposure Delayed Effects ,Real-Time Polymerase Chain Reaction ,Wastewater ,Water Pollutants ,Chemical ,General Science & Technology - Abstract
Triclocarban (TCC) is among the top 10 most commonly detected wastewater contaminants in both concentration and frequency. Its presence in water, as well as its propensity to bioaccumulate, has raised numerous questions about potential endocrine and developmental effects. Here, we investigated whether exposure to an environmentally relevant concentration of TCC could result in transfer from mother to offspring in CD-1 mice during gestation and lactation using accelerator mass spectrometry (AMS). 14C-TCC (100 nM) was administered to dams through drinking water up to gestation day 18, or from birth to post-natal day 10. AMS was used to quantify 14C-concentrations in offspring and dams after exposure. We demonstrated that TCC does effectively transfer from mother to offspring, both trans-placentally and via lactation. TCC-related compounds were detected in the tissues of offspring with significantly higher concentrations in the brain, heart and fat. In addition to transfer from mother to offspring, exposed offspring were heavier in weight than unexposed controls demonstrating an 11% and 8.5% increase in body weight for females and males, respectively. Quantitative real-time polymerase chain reaction (qPCR) was used to examine changes in gene expression in liver and adipose tissue in exposed offspring. qPCR suggested alterations in genes involved in lipid metabolism in exposed female offspring, which was consistent with the observed increased fat pad weights and hepatic triglycerides. This study represents the first report to quantify the transfer of an environmentally relevant concentration of TCC from mother to offspring in the mouse model and evaluate bio-distribution after exposure using AMS. Our findings suggest that early-life exposure to TCC may interfere with lipid metabolism and could have implications for human health.
- Published
- 2017
50. The application of synthetic antibacterial minerals to combat topical infections: exploring a mouse model of MRSA infection
- Author
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Morrison, Keith D., primary, Reiss, Meghan B., additional, Tanner, Tanya D., additional, Gollott, Travis R., additional, Loots, Gabriela G., additional, and Collette, Nicole M., additional
- Published
- 2024
- Full Text
- View/download PDF
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