10 results on '"González-Yebra B"'
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2. Lack of cellular proliferation expression and positive expression for apoptosis gene in shoe-workers with cytogenetic damage due to organic solvents exposure
- Author
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Gonzalez-Yebra, A.L., Aguilar-Salinas, P., Flores Nieto, B., Preciado-Puga, M., and Gonzalez-Yebra, B.
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- 2016
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3. Development, Application and Utility of a Machine Learning Approach for Melanoma and Non-Melanoma Lesion Classification Using Counting Box Fractal Dimension.
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Romero-Morelos P, Herrera-López E, and González-Yebra B
- Abstract
The diagnosis and identification of melanoma are not always accurate, even for experienced dermatologists. Histopathology continues to be the gold standard, assessing specific parameters such as the Breslow index. However, it remains invasive and may lack effectiveness. Therefore, leveraging mathematical modeling and informatics has been a pursuit of diagnostic methods favoring early detection. Fractality, a mathematical parameter quantifying complexity and irregularity, has proven useful in melanoma diagnosis. Nonetheless, no studies have implemented this metric to feed artificial intelligence algorithms for the automatic classification of dermatological lesions, including melanoma. Hence, this study aimed to determine the combined utility of fractal dimension and unsupervised low-computational-requirements machine learning models in classifying melanoma and non-melanoma lesions. We analyzed 39,270 dermatological lesions obtained from the International Skin Imaging Collaboration. Box-counting fractal dimensions were calculated for these lesions. Fractal values were used to implement classification methods by unsupervised machine learning based on principal component analysis and iterated K-means (100 iterations). A clear separation was observed, using only fractal dimension values, between benign or malignant lesions (sensibility 72.4% and specificity 50.1%) and melanoma or non-melanoma lesions (sensibility 72.8% and specificity 50%) and subsequently, the classification quality based on the machine learning model was ≈80% for both benign and malignant or melanoma and non-melanoma lesions. However, the grouping of metastatic melanoma versus non-metastatic melanoma was less effective, probably due to the small sample size included in MM lesions. Nevertheless, we could suggest a decision algorithm based on fractal dimension for dermatological lesion discrimination. On the other hand, it was also determined that the fractal dimension is sufficient to generate unsupervised artificial intelligence models that allow for a more efficient classification of dermatological lesions.
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- 2024
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4. Leukemia Types and Subtypes Analysis: Epidemiological Age-Standardized Exploration in the Mexican Bajio Region.
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Romero-Morelos P, González-Yebra AL, Bueno-Rosario LJ, and González-Yebra B
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- Humans, Mexico epidemiology, Male, Female, Child, Adolescent, Adult, Child, Preschool, Middle Aged, Incidence, Aged, Infant, Young Adult, Prevalence, Age Factors, Aged, 80 and over, Registries statistics & numerical data, Leukemia epidemiology, Leukemia classification
- Abstract
Background and Objectives : Leukemia, characterized by abnormal leukocyte production, exhibits clonal origin from somatic mutations. Globally, it ranked 15th in cancer incidence in 2020, with higher prevalence in developing countries. In Mexico, it was the ninth most frequent cancer. Regional registries are vital for understanding its epidemiology. This study aims to analyze the prevalence and age-standardized incidence rates of leukemias in a tertiary care hospital in the Mexican Bajio region. Materials and Methods : Leukemia cases from 2008-2018 were analyzed, and 535 medical records were included in this study. The prevalence, distribution, and age-specific incidence rate of different types and subtypes of leukemia were determined according to sex and age groups. Results : Overall, 65.79% consisted of lymphocytic leukemia, 33.64% of myeloid leukemia, and 0.56% of monocytic leukemia. No significant sex-based differences were found, but age-specific patterns were observed. Leukemia distribution by age revealed significant associations. Lymphocytic leukemia dominated in the pediatric population, particularly acute lymphocytic leukemia, while myeloid leukemia shifted towards adulthood. Age-specific incidence patterns showed, first, that lymphocytic leukemia is the most common leukemia in pediatric ages, and second, there is a shift from acute lymphocytic leukemia dominance in pediatric ages to myeloid leukemia incidence in late adulthood, emphasizing nuanced epidemiological dynamics. Conclusions : Acute leukemia cases occurred with high prevalence in our study population, with a high incidence in pediatric and adulthood populations, especially for acute lymphocytic leukemia, showing a (<18 years) 153.8 age-standardized incidence rate in the pediatric group, while in the adult population, the age-standardized rate was 59.84. In the age-specific analysis, we found that the childhood group (5-9 years) were the most affected by acute lymphocytic leukemia in the pediatric population, while in the adult population, the early-adulthood group (15-29 years) were the most affected age group. In contrast, chronic myeloid leukemia affected both adults and the pediatric populations, while chronic lymphocytic leukemia and monocytic leukemia were exclusive to adults. The study underscores the need for tailored diagnostic, treatment, and preventive strategies based on age, contributing valuable insights into the leukemia epidemiology of the Bajio region.
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- 2024
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5. Distribution of BCR::ABL1 Transcripts in the Different Clinical Phases of Chronic Myeloid Leukemia: Effect on Hematological Parameters and Patient Survival.
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Romero-Morelos P, González-Yebra AL, Herrerías-García A, Ruíz-Velázquez FA, Bueno-Rosario LJ, and González-Yebra B
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- Humans, Female, Male, Middle Aged, Adult, Aged, RNA, Messenger genetics, RNA, Messenger metabolism, Imatinib Mesylate therapeutic use, Translocation, Genetic, Young Adult, Leukemia, Myelogenous, Chronic, BCR-ABL Positive genetics, Leukemia, Myelogenous, Chronic, BCR-ABL Positive mortality, Leukemia, Myelogenous, Chronic, BCR-ABL Positive blood, Fusion Proteins, bcr-abl genetics
- Abstract
Chronic myeloid leukemia (CML) is a hematopoietic stem cell disorder characterized by the presence of the Philadelphia chromosome, a product of the reciprocal translocation t(9;22)(q34;q11), in the BCR and ABL genes. These rearrangements in both genes lead to the formation of various fusion mRNA products, with preferential expression of b2a2 , b3a2 , and other BCR::ABL1 mRNA variants, combined with additional chromosomal abnormalities. Notably, the distribution and frequency of different mRNA variants vary in different populations. However, studies concerning this in Mexico are limited, and the results have been inconclusive. This study therefore aimed to determine the distribution of BCR::ABL1 mRNA variants in different clinical phases of CML and their effect on hematological parameters and patient survival. This study included 33 patients, whose demographic, clinical, and molecular data on BCR::ABL1 mRNA variants and hematological parameters were collected to identify potential associations. A total of 84.8% (n = 28) of patients had BCR::ABL1 translocation and increased platelet and basophil counts. The most frequent mRNA variant was b3a2 (64.3%), followed by b2a2 (28.6%) and e1a2 (3.6%). Concerning the clinical phases of CML, 75.8% (n = 25), 21.2% (n = 7), and 3% (n = 1) of patients were in the chronic, blast, and accelerated phases, respectively. Moreover, the b3a2 mRNA variant was more commonly identified in patients in the chronic phase. No correlation was observed between mRNA variant expression and patient survival. However, b2a2 was indicative of patients with longer survival as well as those treated with imatinib or nilotinib. Additionally, platelet count could be a marker of BCR::ABL1 translocation.
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- 2024
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6. Frequencies of BCR::ABL1 Transcripts in Patients with Chronic Myeloid Leukemia: A Meta-Analysis.
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Romero-Morelos P, González-Yebra AL, Muñoz-López D, Lara-Lona E, and González-Yebra B
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- Humans, Philadelphia Chromosome, Mexico epidemiology, Fusion Proteins, bcr-abl genetics, Leukemia, Myelogenous, Chronic, BCR-ABL Positive genetics
- Abstract
Chronic myeloid leukemia (CML) is associated with the Philadelphia chromosome and distinct BCR::ABL1 gene transcripts. We assessed the frequencies of these transcripts in Mexico, Latin America, and worldwide. We determined the prevalence of BCR::ABL1 transcripts in CML patients and intercontinental or regional variations using specialized databases and keywords. We analyzed 34 studies from 20 countries, encompassing 5795 patients. Keyword-based searches in specialized databases guided data collection. ANOVA was employed for transcript distribution analysis. The b3a2 transcript was most prevalent globally, followed by b2a2 , with e1a2 being the least frequent. Interestingly, Mexico City exhibited a higher incidence of b2a2 , while b3a2 predominated in the remaining country. Overall, no significant intercontinental or regional variations were observed. b3a2 was the most common BCR::ABL1 transcript worldwide, with b2a2 following closely; e1a2 was infrequent. Notably, this trend remained consistent in Mexico. Evaluating transcript frequencies holds clinical relevance for CML management. Understanding the frequency of transcript informs personalized CML treatments.
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- 2024
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7. Análisis de la presencia de trisomía 8 en las diferentes fases de leucemia mieloide crónica.
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González-Yebra B, Ruiz-Velázquez FA, Herrerías-García A, González AL, Lara-Lona E, Muñoz-López D, and Amador-Medina LF
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- Humans, Leukemia, Myelogenous, Chronic, BCR-ABL Positive
- Abstract
No disponible.
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- 2023
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8. HPV infection profile in cervical lesions.
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González-Yebra B, Mojica-Larrea M, Alonso R, González AL, Romero-Morelos P, Taniguchi-Ponciano K, Ruiz-Romero JA, López-Romero R, and Salcedo M
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- Humans, Female, Pilot Projects, Papillomaviridae genetics, Genotype, Prevalence, DNA, Papillomavirus Infections diagnosis, Papillomavirus Infections epidemiology
- Abstract
Introduction: The prevalence of the different genotypes of human papillomavirus (HPV) varies depending on lesion severity and geographic region., Objective: To identify multiple HPV infections in low- and high-grade cervical lesions in a group of women from the Mexican Bajío region referred with inconclusive cytology., Methods: Pilot study of women referred from primary care units of Guanajuato, Mexico, with cytology suggestive of cervical lesion. Cervical smears were subjected to DNA extraction and HPV genotyping using microarrays., Results: 100 consecutive cases were collected and 90 were analyzed; HPV positivity was observed in 26% of healthy women, and 62% had some degree of cervical lesion. The most common HPV genotypes were 59, 31, 16 and 51. Multiple infections were found in most samples., Conclusions: HPV heterogeneity was identified in the samples of the study population in contrast to worldwide reports; furthermore, multiple infections are common in precursor lesions and decrease in high-grade lesions. These data could have an impact on current HPV vaccination programs., (Copyright: © 2022 Permanyer.)
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- 2022
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9. Multicentric Study to Evaluate Mexican Medical Students' Knowledge of Transplants and Organ Donation.
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Ayala-García MA, Ríos Zambudio A, Martínez-Martínez OI, González Yebra B, Cancino Marentes ME, Rivera Barragán V, Pantoja Hernández MÁ, Cargill Foster NR, Soto Saldaña L, Reyes Sánchez J, Vázquez Guerrero MÁ, Castillo Cardiel JA, and Flores-Vargas G
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- Female, Humans, Male, Mexico, Surveys and Questionnaires, Health Knowledge, Attitudes, Practice, Organ Transplantation education, Students, Medical statistics & numerical data, Tissue and Organ Procurement
- Abstract
Introduction: Transplants and organ donation are greatly aided by future medical professionals having adequate knowledge of this topic. This study aimed to elucidate the level of Mexican medical students' knowledge in the field of transplants and organ donation., Materials and Methods: The evaluation instrument was designed and validated. The design used simple sampling with replacement, selecting a random sample of 5 universities from among the institutional members of the Mexican Association of Departments and Schools of Medicine (Asociación Mexicana de Facultades y Escuelas de Medicina [AMFEM]). The sample was composed of 3214 medical students. Measures of central tendency were determined, and the mean scores obtained across the different universities were compared using a Kruskal-Wallis test. The odds ratio was calculated for the students whose school or department included instruction on transplants and donation within their curriculum. Kendall correlation was used for the students' academic grade level and score. All analyses considered a threshold of P < .05., Results: A questionnaire was administered to a sample of 2563 students to evaluate their knowledge of transplants and organ donation. The average score was 4.02 on a scale of 0 to 10 (standard deviation 0.03), with a 95% confidence interval (3.96-4.08). Students whose school or department taught the subject of transplants and donations within their curriculum obtained an odds ratio of 1.44 (P = .0000822)., Conclusions: The findings of this study suggest that medical students in Mexico do not have sufficient knowledge of transplants and organ donation., (Copyright © 2020 Elsevier Inc. All rights reserved.)
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- 2020
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10. Predicting Human miRNA-like Sequences within Human Papillomavirus Genomes.
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Gutiérrez DA, Varela-Ramírez A, Rodríguez-Esquivel M, Mendoza-Rodríguez MG, Ayala-Sumuano JT, Pineda D, Garrido-Guerrero E, Jiménez-Vega F, Aguilar S, Quiñones M, Nambo MJ, Chávez-Olmos P, Taniguchi-Ponciano K, Marrero-Rodriguez D, Romero-Morelos P, Castro JP, Bandala C, Carrillo-Romero A, González-Yebra B, and Salcedo M
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- Base Sequence, DNA, Viral analysis, High-Throughput Nucleotide Sequencing methods, Host-Pathogen Interactions genetics, Humans, MicroRNAs genetics, Papillomaviridae pathogenicity, Papillomavirus Infections genetics, Papillomavirus Infections virology, Sequence Analysis, DNA methods, Computational Biology methods, Genome, Viral, MicroRNAs analysis, Papillomaviridae genetics, Sequence Alignment methods, Sequence Homology, Nucleic Acid
- Abstract
Background: This study presents a prediction of putative miRNA within several Human Papillomavirus (HPV) types by using bioinformatics tools and a strategy based on sequence and structure alignment. Currently, little is known about HPV miRNAs., Methods: Computational methods have been widely applied in the identification of novel miRNAs when analyzing genome sequences. Here, ten whole-genome sequences from HPV-6, -11, -16, -18, -31, -33, -35, -45, -52, and -58 were analyzed. Software based on local contiguous structure-sequence features and support vector machine (SVM), as well as additional bioinformatics tools, were utilized for identification and classification of real and pseudo microRNA precursors., Results: An initial analysis predicted 200 putative pre-miRNAs for all the ten HPV genome variants. To derive a smaller set of pre-miRNAs candidates, stringent validation criteria was conducted by applying <‒10 ΔG value (Gibbs Free Energy). Thus, only pre-miRNAs with total scores above the cut-off points of 90% were considered as putative pre-miRNAs. As a result of this strategy, 19 pre-miRNAs were selected (hpv-pre-miRNAs). These novel pre-miRNAs were located in different clusters within HPV genomes and some of them were positioned at splice regions. Additionally, the 19 identified pre-miRNAs sequences varied between HPV genotypes. Interestingly, the newly identified miRNAs, 297, 27b, 500, 501-5, and 509-3-5p, were closely implicated in carcinogenesis participating in cellular longevity, cell cycle, metastasis, apoptosis evasion, tissue invasion and cellular growth pathways., Conclusions: The novel putative miRNAs candidates could be promising biomarkers of HPV infection and furthermore, could be targeted for potential therapeutic interventions in HPV-induced malignancies., (Copyright © 2018 IMSS. Published by Elsevier Inc. All rights reserved.)
- Published
- 2018
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