32 results on '"Estonian Science Foundation"'
Search Results
2. Acute Local Metabolomic Alterations in Blood and Muscle Tissue in Intermittent Claudication
- Author
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Tartu University Hospital, Estonian Science Foundation, and Jaak Kals, MD, Professor
- Published
- 2022
3. Prognostic Hemodynamic and Metabolic Profiles of Late Stage Lower Extremity Arterial Disease (PREDICTOR)
- Author
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Estonian Science Foundation, Tartu University Hospital, and Jaak Kals, Principal Investigator
- Published
- 2019
4. Global fine-resolution data on springtail abundance and community structure
- Author
-
Russian Science Foundation, Leipzig University, German Research Foundation, Conselho Nacional de Desenvolvimento Científico e Tecnológico (Brasil), Federal Ministry of Education and Research (Germany), Carl Tryggers Foundation, Royal Marsden NHS Foundation Trust, Centre National de la Recherche Scientifique (France), Australian Research Council, National Science Foundation (US), American Association of University Women, German Centre for Integrative Biodiversity Research, Ministry of Innovation and Technology (Hungary), National Natural Science Foundation of China, South African National Antarctic Programme, Ministerio de Ciencia e Innovación (España), Agencia Estatal de Investigación (España), European Commission, Estonian Science Foundation, Government of Canada, St. John's University, Ministére de l'Education Nationale de la Recherche et de la Technologie (France), Latvian Council of Science, Massey University, Austrian Academy of Sciences, Royal Society Te Apārangi, Slovak Research and Development Agency, Higher Education Commission (Pakistan), Natural Resources Canada, Ontario Ministry of Natural Resources and Forestry, Nanyang Technological University, Potapov, Anton [0000-0002-4456-1710], Striuchkova, Anastasia V. [0000-0002-6666-5844], Alatalo, Juha M. [0000-0001-5084-850X], Arbea, Javier I. [0000-0001-6122-1331], Babenko, Anatoly [0000-0002-6077-0619], Barnes, Andrew D. [0000-0002-6499-381X], Bellini, Bruno C. [0000-0001-7881-9436], Bernava, Verónica [0000-0002-7654-7913], Bokhorst, Stef [0000-0003-0184-1162], Castaño-Meneses, Gabriela [0000-0002-5405-5221], Chauvat, Matthieu [0000-0002-4831-5904], Chomel, Mathilde [0000-0001-5110-2355], Chown, Steven L. [0000-0001-6069-5105], Classen, Aimme T. [0000-0002-6741-3470], de Lima, Estevam C. A. [0000-0002-1680-4818], Doblas-Miranda, E. [0000-0003-3366-2759], Drescher. Jochen [0000-0002-5162-9779], Eisenhauer, Nico [0000-0002-0371-6720], Ferlian, Olga [0000-0002-2536-7592], Filser, Juliane [0000-0003-1535-6168], Franken, Oscar [0000-0001-8361-3117], Greve, Michelle [0000-0002-6229-8506], Holmstrup, Martin [0000-0001-8395-6582], Homet, Pablo [0000-0002-4285-6953], Høye, Toke T. [0000-0001-5387-3284], Janion-Scheepers, C. [0000-0001-5942-7912], Jochum, Malte [0000-0002-8728-1145], Jucevica, Edite [0000-0002-0710-9450], Kapinga, Esther M. [0000-0002-2454-6820], Kovac, L'ubomír [0000-0001-8194-2128], Krab, Eveline J. [0000-0001-8262-0198], Henning Krogh, Paul [0000-0003-2033-553X], Lindo, Zoë [0000-0001-9942-7204], Lu, Jing-Zhong [0000-0002-4051-8993], Luciánez Sánchez, Mª J. [0000-0001-5679-0951], Mawan, Amanda [0000-0003-1820-7432], Moreno Mateos, D. [0000-0002-1539-5848], Negri, Ilaria [0000-0001-5188-1408], Nielsen, Uffe N. [0000-0003-2400-7453], Ochoa-Hueso, Raúl [0000-0002-1839-6926], Oliveira Filho, Luís Carlos I. [0000-0002-9010-481X], Palacios-Vargas, José [0000-0001-9097-6813], Pollierer, Melani M. [0000-0002-1498-2362], Potapov, Mikhail B. [0000-0002-6111-3354], Rashid, Muhammad Imtiaz [0000-0002-5178-4445], Raymond-Léonard, Laura J. [0000-0002-7324-7843], Saifutdinov, Ruslan [0000-0002-8878-3630], Sayer, Emma J. [0000-0002-3322-4487], Seeber, Julia [0000-0003-0189-7377], Shveenkova, Yulia B. [0000-0003-1887-8551], Slade, Eleanor M. [0000-0002-6108-1196], Sterzynska, Maria [0000-0001-9712-4285], Sun, Xin [0000-0002-3988-7847], Taskaeva, Anastasia A. [0000-0002-4519-8458], Thakur, Madhav P. [0000-0001-9426-1313], Tsiafouli, Maria A. [0000-0003-0203-8347], Twala, Mthokozisi N. [0000-0001-6499-1892], Winck, Bruna [0000-0002-7996-9855], Winkler, Daniel E.[0000-0002-6008-0562], Yin, Rui [0000-0002-4580-1317], Zeppelini, Douglas [0000-0002-9026-1129], Scheu, Stefan [0000-0003-4350-9520], Potapov, Anton, Chen, Ting-Wen, Striuchkova, Anastasia V., Alatalo, Juha M., Alexandre, Douglas, Arbea, Javier I., Ashton, Thomas, Ashwood, Frank, Babenko, Anatoly, Bandyopadhyaya, Ipsa, Duarte Maluche Baretta, Carolina R., Joimel, Sophie, Jorge, Bruna Claudia S., Jucevica, Edite, Kapinga, Esther M., Kovac, L'ubomír, Krab, Eveline J., Henning Krogh, Paul, Kuu, Annely, Kuznetsova, Natalia A., Lam Weng, Ngai, Russell, David J., Lin, Dunmei, Lindo, Zoë, Liu, Amy, Lu, Jing-Zhong, Luciánez Sánchez, Mª J., Marx, Michael T., Mawan, Amanda, McCary, Matthew A., Minor, María A., Mitchell, Grace I., Saifutdinov, Ruslan, Moreno Mateos, D., Nakamori, Taizo, Negri, Ilaria, Nielsen, Uffe N., Ochoa-Hueso, Raúl, Oliveira Filho, Luís Carlos I., Palacios-Vargas, José, Pollierer, Melani M., Ponge, Jean-François, Potapov, Mikhail B., Salmon, Sandrine, Querner, Pascal, Rai, Bibishan, Raschmanová, Natália, Rashid, Muhammad Imtiaz, Raymond-Léonard, Laura J., Reis, Aline S., Ross, Giles M., Rousseau, Laurent, Santoja, Mathieu, Saraeva, Anna K., Sayer, Emma J., Scheunemann, Nicole, Scholz, Cornelia, Seeber, Julia, Shaw, Peter, Baretta, Dilmar, Shveenkova, Yulia B., Slade, Eleanor M., Stebaeva, Sophya K., Sterzynska, Maria, Sun, Xin, Susanti, Winda I., Taskaeva, Anastasia A., Tay, Li Si, Thakur, Madhav P., Treasure, Anne M., Barnes, Andrew D., Tsiafouli, Maria A., Twala, Mthokozisi N., Uvarov, Alexei V., Vernier, Lisa A., Widenfalk, Lina A., Widyastuti, Rahayu, Winck, Bruna, Winkler, Daniel E., Wu, Donghui, Xie, Zhijing, Bellini, Bruno C., Yin, Rui, Zampaulo, Robson A., Zeppelini, Douglas, Zhang, Bing, Zoughailech, Abdelmalek, Ashford, Oliver, Klauberg-Filho, Osmar, Scheu, Stefan, Bendjaballah, Mohamed, Berg, Matty P., Bernava, Verónica, Bokhorst, Stef, Bokova, Anna I., Bolger, Thomas, Bouchard, Mathieu, Brito, Roniere A., Buchori, Damayanti, Castaño-Meneses, Gabriela, Chauvat, Matthieu, Chomel, Mathilde, Chow, Yasuko, Chown, Steven L., Classen, Aimme T., Cortet, Jérôme, Čuchta, Peter, Pedrosa, Ana M. de la, de Lima, Estevam C. A., Deharveng, Louis, Doblas-Miranda, E., Drescher. Jochen, Eisenhauer, Nico, Ellers, J., Ferlian, Olga, Ferreira, Susana S. D., Ferreira, Alisa S., Fiera, Cristina, Filser, Juliane, Franken, Oscar, Fujii, S., Gagnon Koudji, Essivi, Gao, Meixiang, Gendreau-Berthiaume, Benoit, Gers. Charles, Greve, Michelle, Hamra-Kroua, Salah, Tanya Handa, Ira, Hasegawa, Motohiro, Heiniger, Charlène, Hishi, Takuo, Holmstrup, Martin, Homet, Pablo, Høye, Toke T., Ivask, Mari, Jacques, Bob, Janion-Scheepers, C., Jochum, Malte, Russian Science Foundation, Leipzig University, German Research Foundation, Conselho Nacional de Desenvolvimento Científico e Tecnológico (Brasil), Federal Ministry of Education and Research (Germany), Carl Tryggers Foundation, Royal Marsden NHS Foundation Trust, Centre National de la Recherche Scientifique (France), Australian Research Council, National Science Foundation (US), American Association of University Women, German Centre for Integrative Biodiversity Research, Ministry of Innovation and Technology (Hungary), National Natural Science Foundation of China, South African National Antarctic Programme, Ministerio de Ciencia e Innovación (España), Agencia Estatal de Investigación (España), European Commission, Estonian Science Foundation, Government of Canada, St. John's University, Ministére de l'Education Nationale de la Recherche et de la Technologie (France), Latvian Council of Science, Massey University, Austrian Academy of Sciences, Royal Society Te Apārangi, Slovak Research and Development Agency, Higher Education Commission (Pakistan), Natural Resources Canada, Ontario Ministry of Natural Resources and Forestry, Nanyang Technological University, Potapov, Anton [0000-0002-4456-1710], Striuchkova, Anastasia V. [0000-0002-6666-5844], Alatalo, Juha M. [0000-0001-5084-850X], Arbea, Javier I. [0000-0001-6122-1331], Babenko, Anatoly [0000-0002-6077-0619], Barnes, Andrew D. [0000-0002-6499-381X], Bellini, Bruno C. [0000-0001-7881-9436], Bernava, Verónica [0000-0002-7654-7913], Bokhorst, Stef [0000-0003-0184-1162], Castaño-Meneses, Gabriela [0000-0002-5405-5221], Chauvat, Matthieu [0000-0002-4831-5904], Chomel, Mathilde [0000-0001-5110-2355], Chown, Steven L. [0000-0001-6069-5105], Classen, Aimme T. [0000-0002-6741-3470], de Lima, Estevam C. A. [0000-0002-1680-4818], Doblas-Miranda, E. [0000-0003-3366-2759], Drescher. Jochen [0000-0002-5162-9779], Eisenhauer, Nico [0000-0002-0371-6720], Ferlian, Olga [0000-0002-2536-7592], Filser, Juliane [0000-0003-1535-6168], Franken, Oscar [0000-0001-8361-3117], Greve, Michelle [0000-0002-6229-8506], Holmstrup, Martin [0000-0001-8395-6582], Homet, Pablo [0000-0002-4285-6953], Høye, Toke T. [0000-0001-5387-3284], Janion-Scheepers, C. [0000-0001-5942-7912], Jochum, Malte [0000-0002-8728-1145], Jucevica, Edite [0000-0002-0710-9450], Kapinga, Esther M. [0000-0002-2454-6820], Kovac, L'ubomír [0000-0001-8194-2128], Krab, Eveline J. [0000-0001-8262-0198], Henning Krogh, Paul [0000-0003-2033-553X], Lindo, Zoë [0000-0001-9942-7204], Lu, Jing-Zhong [0000-0002-4051-8993], Luciánez Sánchez, Mª J. [0000-0001-5679-0951], Mawan, Amanda [0000-0003-1820-7432], Moreno Mateos, D. [0000-0002-1539-5848], Negri, Ilaria [0000-0001-5188-1408], Nielsen, Uffe N. [0000-0003-2400-7453], Ochoa-Hueso, Raúl [0000-0002-1839-6926], Oliveira Filho, Luís Carlos I. [0000-0002-9010-481X], Palacios-Vargas, José [0000-0001-9097-6813], Pollierer, Melani M. [0000-0002-1498-2362], Potapov, Mikhail B. [0000-0002-6111-3354], Rashid, Muhammad Imtiaz [0000-0002-5178-4445], Raymond-Léonard, Laura J. [0000-0002-7324-7843], Saifutdinov, Ruslan [0000-0002-8878-3630], Sayer, Emma J. [0000-0002-3322-4487], Seeber, Julia [0000-0003-0189-7377], Shveenkova, Yulia B. [0000-0003-1887-8551], Slade, Eleanor M. [0000-0002-6108-1196], Sterzynska, Maria [0000-0001-9712-4285], Sun, Xin [0000-0002-3988-7847], Taskaeva, Anastasia A. [0000-0002-4519-8458], Thakur, Madhav P. [0000-0001-9426-1313], Tsiafouli, Maria A. [0000-0003-0203-8347], Twala, Mthokozisi N. [0000-0001-6499-1892], Winck, Bruna [0000-0002-7996-9855], Winkler, Daniel E.[0000-0002-6008-0562], Yin, Rui [0000-0002-4580-1317], Zeppelini, Douglas [0000-0002-9026-1129], Scheu, Stefan [0000-0003-4350-9520], Potapov, Anton, Chen, Ting-Wen, Striuchkova, Anastasia V., Alatalo, Juha M., Alexandre, Douglas, Arbea, Javier I., Ashton, Thomas, Ashwood, Frank, Babenko, Anatoly, Bandyopadhyaya, Ipsa, Duarte Maluche Baretta, Carolina R., Joimel, Sophie, Jorge, Bruna Claudia S., Jucevica, Edite, Kapinga, Esther M., Kovac, L'ubomír, Krab, Eveline J., Henning Krogh, Paul, Kuu, Annely, Kuznetsova, Natalia A., Lam Weng, Ngai, Russell, David J., Lin, Dunmei, Lindo, Zoë, Liu, Amy, Lu, Jing-Zhong, Luciánez Sánchez, Mª J., Marx, Michael T., Mawan, Amanda, McCary, Matthew A., Minor, María A., Mitchell, Grace I., Saifutdinov, Ruslan, Moreno Mateos, D., Nakamori, Taizo, Negri, Ilaria, Nielsen, Uffe N., Ochoa-Hueso, Raúl, Oliveira Filho, Luís Carlos I., Palacios-Vargas, José, Pollierer, Melani M., Ponge, Jean-François, Potapov, Mikhail B., Salmon, Sandrine, Querner, Pascal, Rai, Bibishan, Raschmanová, Natália, Rashid, Muhammad Imtiaz, Raymond-Léonard, Laura J., Reis, Aline S., Ross, Giles M., Rousseau, Laurent, Santoja, Mathieu, Saraeva, Anna K., Sayer, Emma J., Scheunemann, Nicole, Scholz, Cornelia, Seeber, Julia, Shaw, Peter, Baretta, Dilmar, Shveenkova, Yulia B., Slade, Eleanor M., Stebaeva, Sophya K., Sterzynska, Maria, Sun, Xin, Susanti, Winda I., Taskaeva, Anastasia A., Tay, Li Si, Thakur, Madhav P., Treasure, Anne M., Barnes, Andrew D., Tsiafouli, Maria A., Twala, Mthokozisi N., Uvarov, Alexei V., Vernier, Lisa A., Widenfalk, Lina A., Widyastuti, Rahayu, Winck, Bruna, Winkler, Daniel E., Wu, Donghui, Xie, Zhijing, Bellini, Bruno C., Yin, Rui, Zampaulo, Robson A., Zeppelini, Douglas, Zhang, Bing, Zoughailech, Abdelmalek, Ashford, Oliver, Klauberg-Filho, Osmar, Scheu, Stefan, Bendjaballah, Mohamed, Berg, Matty P., Bernava, Verónica, Bokhorst, Stef, Bokova, Anna I., Bolger, Thomas, Bouchard, Mathieu, Brito, Roniere A., Buchori, Damayanti, Castaño-Meneses, Gabriela, Chauvat, Matthieu, Chomel, Mathilde, Chow, Yasuko, Chown, Steven L., Classen, Aimme T., Cortet, Jérôme, Čuchta, Peter, Pedrosa, Ana M. de la, de Lima, Estevam C. A., Deharveng, Louis, Doblas-Miranda, E., Drescher. Jochen, Eisenhauer, Nico, Ellers, J., Ferlian, Olga, Ferreira, Susana S. D., Ferreira, Alisa S., Fiera, Cristina, Filser, Juliane, Franken, Oscar, Fujii, S., Gagnon Koudji, Essivi, Gao, Meixiang, Gendreau-Berthiaume, Benoit, Gers. Charles, Greve, Michelle, Hamra-Kroua, Salah, Tanya Handa, Ira, Hasegawa, Motohiro, Heiniger, Charlène, Hishi, Takuo, Holmstrup, Martin, Homet, Pablo, Høye, Toke T., Ivask, Mari, Jacques, Bob, Janion-Scheepers, C., and Jochum, Malte
- Abstract
Springtails (Collembola) inhabit soils from the Arctic to the Antarctic and comprise an estimated ~32% of all terrestrial arthropods on Earth. Here, we present a global, spatially-explicit database on springtail communities that includes 249,912 occurrences from 44,999 samples and 2,990 sites. These data are mainly raw sample-level records at the species level collected predominantly from private archives of the authors that were quality-controlled and taxonomically-standardised. Despite covering all continents, most of the sample-level data come from the European continent (82.5% of all samples) and represent four habitats: woodlands (57.4%), grasslands (14.0%), agrosystems (13.7%) and scrublands (9.0%). We included sampling by soil layers, and across seasons and years, representing temporal and spatial within-site variation in springtail communities. We also provided data use and sharing guidelines and R code to facilitate the use of the database by other researchers. This data paper describes a static version of the database at the publication date, but the database will be further expanded to include underrepresented regions and linked with trait data.
- Published
- 2024
5. Connecting the multiple dimensions of global soil fungal diversity
- Author
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Estonian Science Foundation, Estonian Research Council, Novo Nordisk Foundation, Baltic Research Cooperation Programme, King Saud University, European Commission, British Ecological Society, Ministerio de Ciencia e Innovación (España), Agencia Estatal de Investigación (España), Generalitat Valenciana, Swedish Research Council, Ghent University, Federal Ministry of Education and Research (Germany), Fondo Nacional de Desarrollo Científico y Tecnológico (Chile), Academy of Finland, National Science Foundation (US), Czech Science Foundation, Carlsberg Foundation, Qatar Petroleum, Ministry of Science and Higher Education of the Russian Federation, Universidad Nacional de Córdoba (Argentina), Yunnan Province, Leopold III-Fonds, Research Foundation - Flanders, Hungarian Academy of Sciences, Botswana International University of Science and Technology, Higher Education Commission (Pakistan), Mikryukov, Vladimir [0000-0003-2786-2690], Dulya, Olesya [0000-0002-7185-8659], Zizka, Alexander [0000-0002-1680-9192], Bahram, Mohammad [0000-0002-9539-3307], Hagh-Doust, Niloufar [0000-0003-0616-5829], Anslan, Sten [0000-0002-2299-454X], Prylutskyi, Oleh [0000-0001-5730-517X], Delgado-Baquerizo, Manuel [0000-0002-6499-576X], Maestre, Fernando T. [0000-0002-7434-4856], Nilsson, Henrik [0000-0002-8052-0107], Pärn, Jaan [0000-0001-6507-8894], Öpik, Maarja [0000-0001-8025-7460], Moora, Mari [0000-0002-4819-7506], Zobel, Martin [0000-0001-7957-6704], Espenberg, Mikk [0000-0003-0469-6394], Mander, Ülo [0000-0003-2340-6989], Khalid, Abdul Nasir [0000-0002-5635-8031], Corrales, Adriana [0000-0001-9885-4634], Agan, Ahto [0000-0001-9010-8944], Vasco-Palacios, Aída-M. [0000-0003-0539-9711], Rinaldi, Andrea [0000-0002-9352-1037], Verbeken, A. [0000-0002-6266-3091], Sulistyo, Bobby [0000-0002-5203-4822], Furneaux, Brendan [0000-0003-3522-7363], Duarte Ritter, Camila [0000-0002-3371-7425], Nyamukondiwa, Casper [0000-0002-0395-4980], Sharp, Cathy [0009-0003-4985-1543], Marín, César [0000-0002-2529-8929], Gohar, Daniyal [0000-0003-0312-1142], Klavina, Darta [0000-0002-1455-9062], Dai, Dong Qin [0000-0001-8935-8807], Nouhra, Eduardo [0000-0002-7080-8211], Machteld Biersma, Elisabeth [0000-0002-9877-2177], Rähn, Elisabeth [0009-0005-5521-4772], Cameron, Erin [0000-0002-3374-9830], Crop, Eske de [0000-0002-9067-6981], Otsing. Eveli [0000-0001-7416-257X], Albornoz, Felipe [0000-0001-9526-0945], Brearley, Francis [0000-0001-5053-5693], Buegger, Franz [0000-0003-3526-4711], Zahn, Geoffrey [0000-0002-8691-692X], Bonito, Gregory [0000-0002-7262-8978], Hiiesalu, Inga [0000-0002-5457-2376], Barrio, Isabel [0000-0002-8120-5248], Heilmann-Clausen, Jacob [0000-0003-4713-6004], Doležal, Jiří [0000-0002-5829-4051], Kupagme, John [0000-0002-9981-050X], Maciá-Vicente, José [0000-0002-7174-7270], Geml, József [0000-0001-8745-0423], Alatalo, Juha [0000-0001-5084-850X], Álvarez-Manjarrez, Julieta [0000-0002-5581-7443], Põldmaa, Kadri [0000-0002-7936-2455], Runnel, Kadrid [0000-0002-7308-3623], Bråthen, Kari Anne [0000-0003-0942-1074], Pritsch, Karin [0000-0001-6384-2473], Newsham, Kevin K. [0000-0002-9108-0936], Panksep, Kristel [0000-0003-4743-6111], Lateef, Adebola A. [0000-0002-0510-7996], Lamit, Louis J. [0000-0002-0385-6010], Saba, M. [0000-0001-7673-2345], Tuomi, Maria [0000-0002-7154-5177], Gryzenhout, M. [0000-0002-9224-4277], Bauters, Marijn [0000-0003-0978-6639], Wijayawardene, Nalin N. [0000-0003-0522-5498], Yorou, Nourou [0000-0001-6997-811X], Kurina, Olavi [0000-0002-4858-4629], Mortimer, Peter [0000-0003-3188-9327], Kohout, Petr [0000-0002-3985-2310], Puusepp, Rasmus [0000-0002-0617-3776], Garibay-Orijel, Roberto [0000-0002-6977-7550], Godoy, Roberto [0000-0002-3719-3091], Alkahtani, Saad [0000-0001-7381-5110], Rahimlou, Saleh [0000-0003-0427-1329], Dudov, Sergey [0000-0003-1512-0956], Ghosh, Soumya [0000-0002-4945-3516], Mundra, Sunil [0000-0002-0535-118X], Ahmed, Talaat [0000-0001-8022-1855], Netherway, Tarquin [0000-0002-9049-9225], Henkel, Terry [0000-0001-9760-8837], Roslin, Tomas [0000-0002-2957-4791], Nteziryayo, Vincent [0000-0002-0176-5780], Fedosov, V. [0000-0002-5331-6346], Lim, Young Woon [0000-0003-2864-3449], Van Nuland, Michael [0000-0002-3333-0212], Soudzilovskaia, Nadejda A. [0000-0002-9584-2109], Antonelli, Alexandre [0000-0003-1842-9297], Kõljalg, Urmas [0000-0002-5171-1668], Abarenkov, K. [0000-0001-5526-4845, Tedersoo, Leho [0000-0002-1635-1249], Mikryukov, Vladimir, Dulya, Olesya, Zizka, Alexander, Bahram, Mohammad, Hagh-Doust, Niloufar, Anslan, Sten, Prylutskyi, Oleh, Delgado-Baquerizo, Manuel, Maestre, Fernando T., Nilsson, Henrik, Pärn, Jaan, Ahmed, Talaat, Netherway, Tarquin, Henkel, Terry, Roslin, Tomas, Nteziryayo, Vincent, Fedosov, V., Onipchenko, Vladimir, Yasanthika, W. A. Erand, Lim, Young Woon, Van Nuland, Michael, Soudzilovskaia, Nadejda A., Antonelli, Alexandre, Kõljalg, Urmas, Abarenkov, K., Tedersoo, Leho, Öpik, Maarja, Moora, Mari, Zobel, Martin, Espenberg, Mikk, Mander, Ülo, Khalid, Abdul Nasir, Corrales, Adriana, Agan, Ahto, Vasco-Palacios, Aída-M., Saitta, A., Rinaldi, Andrea, Verbeken, A., Sulistyo, Bobby, Tamgnoue, Boris, Furneaux, Brendan, Duarte Ritter, Camila, Nyamukondiwa, Casper, Sharp, Cathy, Marín, César, Gohar, Daniyal, Klavina, Darta, Sharmah, Dipon, Dai, Dong Qin, Nouhra, Eduardo, Machteld Biersma, Elisabeth, Rähn, Elisabeth, Cameron, Erin, Crop, Eske de, Otsing. Eveli, Albornoz, Felipe, Brearley, Francis, Buegger, Franz, Zahn, Geoffrey, Bonito, Gregory, Hiiesalu, Inga, Barrio, Isabel, Heilmann-Clausen, Jacob, Ankuda, Jelena, Doležal, Jiří, Kupagme, John, Maciá-Vicente, José, Djeugap Fovo, Joseph, Geml, József, Alatalo, Juha M., Álvarez-Manjarrez, Julieta, Põldmaa, Kadri, Runnel, Kadrid, Adamson, Kalev, Bråthen, Kari Anne, Pritsch, Karin, Tchan, Kassim I., Armolaitis, Kęstutis, Hyde, K.D., Newsham, Kevin K., Panksep, Kristel, Lateef, Adebola A., Hansson, Linda, Lamit, Louis J., Saba, M., Tuomi, Maria, Gryzenhout, M., Bauters, Marijn, Piepenbring, M., Wijayawardene, Nalin N., Yorou, Nourou, Kurina, Olavi, Mortimer, Peter, Meidl, Peter, Kohout, Petr, Puusepp, Rasmus, Drenkhan, Rein, Garibay-Orijel, Roberto, Godoy, Roberto, Alkahtani, Saad, Rahimlou, Saleh, Dudov, Sergey, Polme, Sergei, Ghosh, Soumya, Mundra, Sunil, Estonian Science Foundation, Estonian Research Council, Novo Nordisk Foundation, Baltic Research Cooperation Programme, King Saud University, European Commission, British Ecological Society, Ministerio de Ciencia e Innovación (España), Agencia Estatal de Investigación (España), Generalitat Valenciana, Swedish Research Council, Ghent University, Federal Ministry of Education and Research (Germany), Fondo Nacional de Desarrollo Científico y Tecnológico (Chile), Academy of Finland, National Science Foundation (US), Czech Science Foundation, Carlsberg Foundation, Qatar Petroleum, Ministry of Science and Higher Education of the Russian Federation, Universidad Nacional de Córdoba (Argentina), Yunnan Province, Leopold III-Fonds, Research Foundation - Flanders, Hungarian Academy of Sciences, Botswana International University of Science and Technology, Higher Education Commission (Pakistan), Mikryukov, Vladimir [0000-0003-2786-2690], Dulya, Olesya [0000-0002-7185-8659], Zizka, Alexander [0000-0002-1680-9192], Bahram, Mohammad [0000-0002-9539-3307], Hagh-Doust, Niloufar [0000-0003-0616-5829], Anslan, Sten [0000-0002-2299-454X], Prylutskyi, Oleh [0000-0001-5730-517X], Delgado-Baquerizo, Manuel [0000-0002-6499-576X], Maestre, Fernando T. [0000-0002-7434-4856], Nilsson, Henrik [0000-0002-8052-0107], Pärn, Jaan [0000-0001-6507-8894], Öpik, Maarja [0000-0001-8025-7460], Moora, Mari [0000-0002-4819-7506], Zobel, Martin [0000-0001-7957-6704], Espenberg, Mikk [0000-0003-0469-6394], Mander, Ülo [0000-0003-2340-6989], Khalid, Abdul Nasir [0000-0002-5635-8031], Corrales, Adriana [0000-0001-9885-4634], Agan, Ahto [0000-0001-9010-8944], Vasco-Palacios, Aída-M. [0000-0003-0539-9711], Rinaldi, Andrea [0000-0002-9352-1037], Verbeken, A. [0000-0002-6266-3091], Sulistyo, Bobby [0000-0002-5203-4822], Furneaux, Brendan [0000-0003-3522-7363], Duarte Ritter, Camila [0000-0002-3371-7425], Nyamukondiwa, Casper [0000-0002-0395-4980], Sharp, Cathy [0009-0003-4985-1543], Marín, César [0000-0002-2529-8929], Gohar, Daniyal [0000-0003-0312-1142], Klavina, Darta [0000-0002-1455-9062], Dai, Dong Qin [0000-0001-8935-8807], Nouhra, Eduardo [0000-0002-7080-8211], Machteld Biersma, Elisabeth [0000-0002-9877-2177], Rähn, Elisabeth [0009-0005-5521-4772], Cameron, Erin [0000-0002-3374-9830], Crop, Eske de [0000-0002-9067-6981], Otsing. Eveli [0000-0001-7416-257X], Albornoz, Felipe [0000-0001-9526-0945], Brearley, Francis [0000-0001-5053-5693], Buegger, Franz [0000-0003-3526-4711], Zahn, Geoffrey [0000-0002-8691-692X], Bonito, Gregory [0000-0002-7262-8978], Hiiesalu, Inga [0000-0002-5457-2376], Barrio, Isabel [0000-0002-8120-5248], Heilmann-Clausen, Jacob [0000-0003-4713-6004], Doležal, Jiří [0000-0002-5829-4051], Kupagme, John [0000-0002-9981-050X], Maciá-Vicente, José [0000-0002-7174-7270], Geml, József [0000-0001-8745-0423], Alatalo, Juha [0000-0001-5084-850X], Álvarez-Manjarrez, Julieta [0000-0002-5581-7443], Põldmaa, Kadri [0000-0002-7936-2455], Runnel, Kadrid [0000-0002-7308-3623], Bråthen, Kari Anne [0000-0003-0942-1074], Pritsch, Karin [0000-0001-6384-2473], Newsham, Kevin K. [0000-0002-9108-0936], Panksep, Kristel [0000-0003-4743-6111], Lateef, Adebola A. [0000-0002-0510-7996], Lamit, Louis J. [0000-0002-0385-6010], Saba, M. [0000-0001-7673-2345], Tuomi, Maria [0000-0002-7154-5177], Gryzenhout, M. [0000-0002-9224-4277], Bauters, Marijn [0000-0003-0978-6639], Wijayawardene, Nalin N. [0000-0003-0522-5498], Yorou, Nourou [0000-0001-6997-811X], Kurina, Olavi [0000-0002-4858-4629], Mortimer, Peter [0000-0003-3188-9327], Kohout, Petr [0000-0002-3985-2310], Puusepp, Rasmus [0000-0002-0617-3776], Garibay-Orijel, Roberto [0000-0002-6977-7550], Godoy, Roberto [0000-0002-3719-3091], Alkahtani, Saad [0000-0001-7381-5110], Rahimlou, Saleh [0000-0003-0427-1329], Dudov, Sergey [0000-0003-1512-0956], Ghosh, Soumya [0000-0002-4945-3516], Mundra, Sunil [0000-0002-0535-118X], Ahmed, Talaat [0000-0001-8022-1855], Netherway, Tarquin [0000-0002-9049-9225], Henkel, Terry [0000-0001-9760-8837], Roslin, Tomas [0000-0002-2957-4791], Nteziryayo, Vincent [0000-0002-0176-5780], Fedosov, V. [0000-0002-5331-6346], Lim, Young Woon [0000-0003-2864-3449], Van Nuland, Michael [0000-0002-3333-0212], Soudzilovskaia, Nadejda A. [0000-0002-9584-2109], Antonelli, Alexandre [0000-0003-1842-9297], Kõljalg, Urmas [0000-0002-5171-1668], Abarenkov, K. [0000-0001-5526-4845, Tedersoo, Leho [0000-0002-1635-1249], Mikryukov, Vladimir, Dulya, Olesya, Zizka, Alexander, Bahram, Mohammad, Hagh-Doust, Niloufar, Anslan, Sten, Prylutskyi, Oleh, Delgado-Baquerizo, Manuel, Maestre, Fernando T., Nilsson, Henrik, Pärn, Jaan, Ahmed, Talaat, Netherway, Tarquin, Henkel, Terry, Roslin, Tomas, Nteziryayo, Vincent, Fedosov, V., Onipchenko, Vladimir, Yasanthika, W. A. Erand, Lim, Young Woon, Van Nuland, Michael, Soudzilovskaia, Nadejda A., Antonelli, Alexandre, Kõljalg, Urmas, Abarenkov, K., Tedersoo, Leho, Öpik, Maarja, Moora, Mari, Zobel, Martin, Espenberg, Mikk, Mander, Ülo, Khalid, Abdul Nasir, Corrales, Adriana, Agan, Ahto, Vasco-Palacios, Aída-M., Saitta, A., Rinaldi, Andrea, Verbeken, A., Sulistyo, Bobby, Tamgnoue, Boris, Furneaux, Brendan, Duarte Ritter, Camila, Nyamukondiwa, Casper, Sharp, Cathy, Marín, César, Gohar, Daniyal, Klavina, Darta, Sharmah, Dipon, Dai, Dong Qin, Nouhra, Eduardo, Machteld Biersma, Elisabeth, Rähn, Elisabeth, Cameron, Erin, Crop, Eske de, Otsing. Eveli, Albornoz, Felipe, Brearley, Francis, Buegger, Franz, Zahn, Geoffrey, Bonito, Gregory, Hiiesalu, Inga, Barrio, Isabel, Heilmann-Clausen, Jacob, Ankuda, Jelena, Doležal, Jiří, Kupagme, John, Maciá-Vicente, José, Djeugap Fovo, Joseph, Geml, József, Alatalo, Juha M., Álvarez-Manjarrez, Julieta, Põldmaa, Kadri, Runnel, Kadrid, Adamson, Kalev, Bråthen, Kari Anne, Pritsch, Karin, Tchan, Kassim I., Armolaitis, Kęstutis, Hyde, K.D., Newsham, Kevin K., Panksep, Kristel, Lateef, Adebola A., Hansson, Linda, Lamit, Louis J., Saba, M., Tuomi, Maria, Gryzenhout, M., Bauters, Marijn, Piepenbring, M., Wijayawardene, Nalin N., Yorou, Nourou, Kurina, Olavi, Mortimer, Peter, Meidl, Peter, Kohout, Petr, Puusepp, Rasmus, Drenkhan, Rein, Garibay-Orijel, Roberto, Godoy, Roberto, Alkahtani, Saad, Rahimlou, Saleh, Dudov, Sergey, Polme, Sergei, Ghosh, Soumya, and Mundra, Sunil
- Abstract
How the multiple facets of soil fungal diversity vary worldwide remains virtually unknown, hindering the management of this essential species-rich group. By sequencing high-resolution DNA markers in over 4000 topsoil samples from natural and human-altered ecosystems across all continents, we illustrate the distributions and drivers of different levels of taxonomic and phylogenetic diversity of fungi and their ecological groups. We show the impact of precipitation and temperature interactions on local fungal species richness (alpha diversity) across different climates. Our findings reveal how temperature drives fungal compositional turnover (beta diversity) and phylogenetic diversity, linking them with regional species richness (gamma diversity). We integrate fungi into the principles of global biodiversity distribution and present detailed maps for biodiversity conservation and modeling of global ecological processes.
- Published
- 2023
6. The increasing threat to European forests from the invasive foliar pine pathogen, Lecanosticta acicola
- Author
-
Estonian Science Foundation, Russian Academy of Sciences, Swedish Research Council, Ministry of Regional Affairs and Agriculture (Estonia), Ministry of Education and Science (Bulgaria), Università degli Studi di Firenze, European Commission, Slovenian Research Agency, Federal Office for the Environment (Switzerland), Tubby, K. [0000-0001-6864-4185], Adamčikova, K. [0000-0001-5407-5233], Adamson, K. [0000-0002-8810-8838], Akiba, M. [0000-0003-1412-9596], Barnes, Irene [0000-0002-4349-3402], Boroń, P. [0000-0002-8581-6759], Bragança, H. [0000-0002-7957-5493], Bulgakov, T. [0000-0002-4874-6851], Capretti, P. [0000-0002-1893-9871], Cech, T. [0000-0001-6681-5040], Cleary, M. [0000-0002-0318-5974], Davydenko, K. [0000-0001-6077-8533], Elvira Recuenco, Margarita [0000-0001-6749-3346], Enderle, R. [0000-0002-3436-9581], Georgieva, M. [0000-0003-3165-1992], Ghelardini, L. [0000-0002-3180-4226], Husson, C. [0000-0002-9148-9926], Iturritxa, Eugenia [0000-0002-6390-5873], Markovskaja, S. [0000-0003-3111-6949], Mesanza, Nebai [0000-0002-1578-9193], Ogris, N. [0000-0002-4058-9417], Oskay, F. [0000-0002-8918-5595], Piškur, B. [0000-0002-9914-4930], Queloz, V. [0000-0002-1888-4882], Raitelaitytė, K. [0000-0001-9753-9712], Raposo Llobet, María Rosa [0000-0002-4893-6874], Soukainen, M. [0000-0001-6686-0191], Vahalík, P. [0000-0003-3404-3095], Vester, M. [0000-0003-3596-4873], Mullett, M. [0000-0002-6013-0347], Tubby, K., Adamčikova, K., Adamson, K., Akiba, M., Barnes, Irene, Boroń, P., Bragança, H., Bulgakov, T., Burgdorf, N., Capretti, P., Cech, T., Cleary, M., Davydenko, K., Drenkhan, R., Elvira Recuenco, Margarita, Enderle, R., Gardner, J., Georgieva, M., Ghelardini, L., Husson, C., Iturritxa, Eugenia, Markovskaja, S., Mesanza, Nebai, Ogris, N., Oskay, F., Piškur, B., Queloz, V., Raitelaitytė, K., Raposo Llobet, María Rosa, Soukainen, M., Strasser, Ludwig, Vahalík, P., Vester, M., Mullett, M., Estonian Science Foundation, Russian Academy of Sciences, Swedish Research Council, Ministry of Regional Affairs and Agriculture (Estonia), Ministry of Education and Science (Bulgaria), Università degli Studi di Firenze, European Commission, Slovenian Research Agency, Federal Office for the Environment (Switzerland), Tubby, K. [0000-0001-6864-4185], Adamčikova, K. [0000-0001-5407-5233], Adamson, K. [0000-0002-8810-8838], Akiba, M. [0000-0003-1412-9596], Barnes, Irene [0000-0002-4349-3402], Boroń, P. [0000-0002-8581-6759], Bragança, H. [0000-0002-7957-5493], Bulgakov, T. [0000-0002-4874-6851], Capretti, P. [0000-0002-1893-9871], Cech, T. [0000-0001-6681-5040], Cleary, M. [0000-0002-0318-5974], Davydenko, K. [0000-0001-6077-8533], Elvira Recuenco, Margarita [0000-0001-6749-3346], Enderle, R. [0000-0002-3436-9581], Georgieva, M. [0000-0003-3165-1992], Ghelardini, L. [0000-0002-3180-4226], Husson, C. [0000-0002-9148-9926], Iturritxa, Eugenia [0000-0002-6390-5873], Markovskaja, S. [0000-0003-3111-6949], Mesanza, Nebai [0000-0002-1578-9193], Ogris, N. [0000-0002-4058-9417], Oskay, F. [0000-0002-8918-5595], Piškur, B. [0000-0002-9914-4930], Queloz, V. [0000-0002-1888-4882], Raitelaitytė, K. [0000-0001-9753-9712], Raposo Llobet, María Rosa [0000-0002-4893-6874], Soukainen, M. [0000-0001-6686-0191], Vahalík, P. [0000-0003-3404-3095], Vester, M. [0000-0003-3596-4873], Mullett, M. [0000-0002-6013-0347], Tubby, K., Adamčikova, K., Adamson, K., Akiba, M., Barnes, Irene, Boroń, P., Bragança, H., Bulgakov, T., Burgdorf, N., Capretti, P., Cech, T., Cleary, M., Davydenko, K., Drenkhan, R., Elvira Recuenco, Margarita, Enderle, R., Gardner, J., Georgieva, M., Ghelardini, L., Husson, C., Iturritxa, Eugenia, Markovskaja, S., Mesanza, Nebai, Ogris, N., Oskay, F., Piškur, B., Queloz, V., Raitelaitytė, K., Raposo Llobet, María Rosa, Soukainen, M., Strasser, Ludwig, Vahalík, P., Vester, M., and Mullett, M.
- Abstract
European forests are threatened by increasing numbers of invasive pests and pathogens. Over the past century, Lecanosticta acicola, a foliar pathogen predominantly of Pinus spp., has expanded its range globally, and is increasing in impact. Lecanosticta acicola causes brown spot needle blight, resulting in premature defoliation, reduced growth, and mortality in some hosts. Originating from southern regions of North American, it devastated forests in the USA's southern states in the early twentieth century, and in 1942 was discovered in Spain. Derived from Euphresco project 'Brownspotrisk,' this study aimed to establish the current distribution of Lecanosticta species, and assess the risks of L. acicola to European forests. Pathogen reports from the literature, and new/ unpublished survey data were combined into an open-access geo-database (http://www.portalofforestpathology.com), and used to visualise the pathogen's range, infer its climatic tolerance, and update its host range. Lecanosticta species have now been recorded in 44 countries, mostly in the northern hemisphere. The type species, L. acicola, has increased its range in recent years, and is present in 24 out of the 26 European countries where data were available. Other species of Lecanosticta are largely restricted to Mexico and Central America, and recently Colombia. The geo-database records demonstrate that L. acicola tolerates a wide range of climates across the northern hemisphere, and indicate its potential to colonise Pinus spp. forests across large swathes of the Europe. Preliminary analyses suggest L. acicola could affect 62% of global Pinus species area by the end of this century, under climate change predictions. Although its host range appears slightly narrower than the similar Dothistroma species, Lecanosticta species were recorded on 70 host taxa, mostly Pinus spp., but including, Cedrus and Picea spp. Twenty-three, including species of critical ecological, environmental and economic significan
- Published
- 2023
7. Globally invariant metabolism but density-diversity mismatch in springtails
- Author
-
Russian Science Foundation, University of Göttingen, Securing Antarctica's Environmental Future (Australia), National Natural Science Foundation of China, South African National Antarctic Programme, Natural Resources Canada, Natural Sciences and Engineering Research Council of Canada, Independent Research Fund Denmark, Estonian Science Foundation, European Research Council, European Commission, German Research Foundation, Agence Nationale de la Recherche (France), Ministère de l'Agriculture et de la Souveraineté alimentaire (France), Ministére de l'Education Nationale de la Recherche et de la Technologie (France), Ministère de la Transition écologique et de la Cohésion des territoires (France), Agence de l'Environnement et de la Maîtrise de l'Energie (France), Fundamental Research Funds for the Central Universities (China), Massey University, Austrian Academy of Sciences, Higher Education Commission (Pakistan), Government of Austria, Conselho Nacional de Desenvolvimento Científico e Tecnológico (Brasil), Fundação de Apoio à Pesquisa Científica e Tecnológica do Estado de Santa Catarina, Latvian Council of Science, Ministerio de Ciencia e Innovación (España), Ministry of Innovation and Technology (Hungary), Potapov, Anton [0000-0002-4456-1710], Guerra, Carlos A. [0000-0003-4917-2105], Babenko, Anatoly [0000-0002-6077-0619], Bellini, Bruno C. [0000-0001-7881-9436], Chown, Steven L. [0000-0001-6069-5105], Kovac, L'ubomír [0000-0001-8194-2128], Alatalo, Juha M. [0000-0001-5084-850X], Arbea, Javier I. [0000-0001-6122-1331], Bokhorst, Stef [0000-0003-0184-1162], Castaño-Meneses, Gabriela [0000-0002-5405-5221], Chauvat, Matthieu [0000-0002-4831-5904], Chomel, Mathilde [0000-0001-5110-2355], Classen, Aimme T. [0000-0002-6741-3470], Filser, Juliane [0000-0003-1535-6168], Franken, Oscar [0000-0001-8361-3117], Greve, Michelle [0000-0002-6229-8506], Holmstrup, Martin [0000-0001-8395-6582], Homet, Pablo [0000-0002-4285-6953], Janion-Scheepers, C. [0000-0001-5942-7912], Jochum, Malte [0000-0002-8728-1145], Jucevica, Edite [0000-0002-0710-9450], Ferlian, Olga [0000-0002-2536-7592], Oliveira Filho, Luís Carlos I. [0000-0002-9010-481X], Krab, Eveline J. [0000-0001-8262-0198], de Lima, Estevam C. A. [0000-0002-1680-4818], Lindo, Zoë [0000-0001-9942-7204], Lu, Jing-Zhong [0000-0002-4051-8993], Negri, Ilaria [0000-0001-5188-1408], Ochoa-Hueso, Raúl [0000-0002-1839-6926], Palacios-Vargas, José [0000-0001-9097-6813], Pollierer, Melani M. [0000-0002-1498-2362], Rashid, Muhammad Imtiaz [0000-0002-5178-4445], Raymond-Léonard, Laura J. [0000-0002-7324-7843], Saifutdinov, Ruslan [0000-0002-8878-3630], Sayer, Emma J. [0000-0002-3322-4487], Seeber, Julia [0000-0003-0189-7377], Shveenkova, Yulia B. [0000-0003-1887-8551], Sterzynska, Maria [0000-0001-9712-4285], Sun, Xin [0000-0002-3988-7847], Taskaeva, Anastasia A. [0000-0002-4519-8458], Thakur, Madhav P. [0000-0001-9426-1313], Tsiafouli, Maria A. [0000-0003-0203-8347], Twala, Mthokozisi N. [0000-0001-6499-1892], Winck, Bruna [0000-0002-7996-9855], Winkler, Daniel E.[0000-0002-6008-0562], Yin, Rui [0000-0002-4580-1317], Zeppelini, Douglas [0000-0002-9026-1129], Crowther, Thomas W. [0000-0001-5674-8913], Eisenhauer, Nico [0000-0002-0371-6720], Scheu, Stefan [0000-0003-4350-9520], Luciánez Sánchez, Mª J. [0000-0001-5679-0951], Potapov, Mikhail B. [0000-0002-6111-3354], Potapov, Anton, Guerra, Carlos A., van den Hoogen, Johan, Babenko, Anatoly, Bellini, Bruno C., Berg, Matty P., Chown, Steven L., Deharveng, Louis, Kovac, L'ubomír, Kuznetsova, Natalia A., Ponge, Jean-François, Yin, Rui, Zeppelini, Douglas, Crowther, Thomas W., Eisenhauer, Nico, Scheu, Stefan, Potapov, Mikhail B., Russell, David J., Alexandre, Douglas, Alatalo, Juha M., Arbea, Javier I., Bandyopadhyaya, Ipsa, Bernava, Verónica, Bokhorst, Stef, Bolger, Thomas, Castaño-Meneses, Gabriela, Chauvat, Matthieu, Chen, Ting-Wen, Chomel, Mathilde, Classen, Aimme T., Cortet, Jérôme, Čuchta, Peter, Pedrosa, Ana M. de la, Ferreira, Susana S. D., Fiera, Cristina, Filser, Juliane, Franken, Oscar, Fujii, S., Gagnon Koudji, Essivi, Gao, Meixiang, Gendreau-Berthiaume, Benoit, Gómez-Pamies, Diego F., Greve, Michelle, Handa, I. Tanya, Heiniger, Charlène, Holmstrup, Martin, Homet, Pablo, Ivask, Mari, Janion-Scheepers, C., Jochum, Malte, Joimel, Sophie, Jorge, Bruna Claudia S., Jucevica, Edite, Ferlian, Olga, Oliveira Filho, Luís Carlos I., Klauberg-Filho, Osmar, Baretta, Dilmar, Krab, Eveline J., Kuu, Annely, de Lima, Estevam C. A., Lin, Dunmei, Lindo, Zoë, Liu, Amy, Lu, Jing-Zhong, Luciánez Sánchez, Mª J., Marx, Michael T., McCary, Matthew A., Minor, María A., Nakamori, Taizo, Negri, Ilaria, Ochoa-Hueso, Raúl, Palacios-Vargas, José, Pollierer, Melani M., Querner, Pascal, Raschmanová, Natália, Rashid, Muhammad Imtiaz, Raymond-Léonard, Laura J., Rousseau, Laurent, Saifutdinov, Ruslan, Salmon, Sandrine, Sayer, Emma J., Scheunemann, Nicole, Scholz, Cornelia, Seeber, Julia, Shveenkova, Yulia B., Stebaeva, Sophya K., Sterzynska, Maria, Sun, Xin, Susanti, Winda I., Taskaeva, Anastasia A., Thakur, Madhav P., Tsiafouli, Maria A., Turnbull, Matthew S., Twala, Mthokozisi N., Uvarov, Alexei V., Vernier, Lisa A., Widenfalk, Lina A., Winck, Bruna, Winkler, Daniel E., Wu, Donghui, Xie, Zhijing, Russian Science Foundation, University of Göttingen, Securing Antarctica's Environmental Future (Australia), National Natural Science Foundation of China, South African National Antarctic Programme, Natural Resources Canada, Natural Sciences and Engineering Research Council of Canada, Independent Research Fund Denmark, Estonian Science Foundation, European Research Council, European Commission, German Research Foundation, Agence Nationale de la Recherche (France), Ministère de l'Agriculture et de la Souveraineté alimentaire (France), Ministére de l'Education Nationale de la Recherche et de la Technologie (France), Ministère de la Transition écologique et de la Cohésion des territoires (France), Agence de l'Environnement et de la Maîtrise de l'Energie (France), Fundamental Research Funds for the Central Universities (China), Massey University, Austrian Academy of Sciences, Higher Education Commission (Pakistan), Government of Austria, Conselho Nacional de Desenvolvimento Científico e Tecnológico (Brasil), Fundação de Apoio à Pesquisa Científica e Tecnológica do Estado de Santa Catarina, Latvian Council of Science, Ministerio de Ciencia e Innovación (España), Ministry of Innovation and Technology (Hungary), Potapov, Anton [0000-0002-4456-1710], Guerra, Carlos A. [0000-0003-4917-2105], Babenko, Anatoly [0000-0002-6077-0619], Bellini, Bruno C. [0000-0001-7881-9436], Chown, Steven L. [0000-0001-6069-5105], Kovac, L'ubomír [0000-0001-8194-2128], Alatalo, Juha M. [0000-0001-5084-850X], Arbea, Javier I. [0000-0001-6122-1331], Bokhorst, Stef [0000-0003-0184-1162], Castaño-Meneses, Gabriela [0000-0002-5405-5221], Chauvat, Matthieu [0000-0002-4831-5904], Chomel, Mathilde [0000-0001-5110-2355], Classen, Aimme T. [0000-0002-6741-3470], Filser, Juliane [0000-0003-1535-6168], Franken, Oscar [0000-0001-8361-3117], Greve, Michelle [0000-0002-6229-8506], Holmstrup, Martin [0000-0001-8395-6582], Homet, Pablo [0000-0002-4285-6953], Janion-Scheepers, C. [0000-0001-5942-7912], Jochum, Malte [0000-0002-8728-1145], Jucevica, Edite [0000-0002-0710-9450], Ferlian, Olga [0000-0002-2536-7592], Oliveira Filho, Luís Carlos I. [0000-0002-9010-481X], Krab, Eveline J. [0000-0001-8262-0198], de Lima, Estevam C. A. [0000-0002-1680-4818], Lindo, Zoë [0000-0001-9942-7204], Lu, Jing-Zhong [0000-0002-4051-8993], Negri, Ilaria [0000-0001-5188-1408], Ochoa-Hueso, Raúl [0000-0002-1839-6926], Palacios-Vargas, José [0000-0001-9097-6813], Pollierer, Melani M. [0000-0002-1498-2362], Rashid, Muhammad Imtiaz [0000-0002-5178-4445], Raymond-Léonard, Laura J. [0000-0002-7324-7843], Saifutdinov, Ruslan [0000-0002-8878-3630], Sayer, Emma J. [0000-0002-3322-4487], Seeber, Julia [0000-0003-0189-7377], Shveenkova, Yulia B. [0000-0003-1887-8551], Sterzynska, Maria [0000-0001-9712-4285], Sun, Xin [0000-0002-3988-7847], Taskaeva, Anastasia A. [0000-0002-4519-8458], Thakur, Madhav P. [0000-0001-9426-1313], Tsiafouli, Maria A. [0000-0003-0203-8347], Twala, Mthokozisi N. [0000-0001-6499-1892], Winck, Bruna [0000-0002-7996-9855], Winkler, Daniel E.[0000-0002-6008-0562], Yin, Rui [0000-0002-4580-1317], Zeppelini, Douglas [0000-0002-9026-1129], Crowther, Thomas W. [0000-0001-5674-8913], Eisenhauer, Nico [0000-0002-0371-6720], Scheu, Stefan [0000-0003-4350-9520], Luciánez Sánchez, Mª J. [0000-0001-5679-0951], Potapov, Mikhail B. [0000-0002-6111-3354], Potapov, Anton, Guerra, Carlos A., van den Hoogen, Johan, Babenko, Anatoly, Bellini, Bruno C., Berg, Matty P., Chown, Steven L., Deharveng, Louis, Kovac, L'ubomír, Kuznetsova, Natalia A., Ponge, Jean-François, Yin, Rui, Zeppelini, Douglas, Crowther, Thomas W., Eisenhauer, Nico, Scheu, Stefan, Potapov, Mikhail B., Russell, David J., Alexandre, Douglas, Alatalo, Juha M., Arbea, Javier I., Bandyopadhyaya, Ipsa, Bernava, Verónica, Bokhorst, Stef, Bolger, Thomas, Castaño-Meneses, Gabriela, Chauvat, Matthieu, Chen, Ting-Wen, Chomel, Mathilde, Classen, Aimme T., Cortet, Jérôme, Čuchta, Peter, Pedrosa, Ana M. de la, Ferreira, Susana S. D., Fiera, Cristina, Filser, Juliane, Franken, Oscar, Fujii, S., Gagnon Koudji, Essivi, Gao, Meixiang, Gendreau-Berthiaume, Benoit, Gómez-Pamies, Diego F., Greve, Michelle, Handa, I. Tanya, Heiniger, Charlène, Holmstrup, Martin, Homet, Pablo, Ivask, Mari, Janion-Scheepers, C., Jochum, Malte, Joimel, Sophie, Jorge, Bruna Claudia S., Jucevica, Edite, Ferlian, Olga, Oliveira Filho, Luís Carlos I., Klauberg-Filho, Osmar, Baretta, Dilmar, Krab, Eveline J., Kuu, Annely, de Lima, Estevam C. A., Lin, Dunmei, Lindo, Zoë, Liu, Amy, Lu, Jing-Zhong, Luciánez Sánchez, Mª J., Marx, Michael T., McCary, Matthew A., Minor, María A., Nakamori, Taizo, Negri, Ilaria, Ochoa-Hueso, Raúl, Palacios-Vargas, José, Pollierer, Melani M., Querner, Pascal, Raschmanová, Natália, Rashid, Muhammad Imtiaz, Raymond-Léonard, Laura J., Rousseau, Laurent, Saifutdinov, Ruslan, Salmon, Sandrine, Sayer, Emma J., Scheunemann, Nicole, Scholz, Cornelia, Seeber, Julia, Shveenkova, Yulia B., Stebaeva, Sophya K., Sterzynska, Maria, Sun, Xin, Susanti, Winda I., Taskaeva, Anastasia A., Thakur, Madhav P., Tsiafouli, Maria A., Turnbull, Matthew S., Twala, Mthokozisi N., Uvarov, Alexei V., Vernier, Lisa A., Widenfalk, Lina A., Winck, Bruna, Winkler, Daniel E., Wu, Donghui, and Xie, Zhijing
- Abstract
Soil life supports the functioning and biodiversity of terrestrial ecosystems. Springtails (Collembola) are among the most abundant soil arthropods regulating soil fertility and flow of energy through above- and belowground food webs. However, the global distribution of springtail diversity and density, and how these relate to energy fluxes remains unknown. Here, using a global dataset representing 2470 sites, we estimate the total soil springtail biomass at 27.5 megatons carbon, which is threefold higher than wild terrestrial vertebrates, and record peak densities up to 2 million individuals per square meter in the tundra. Despite a 20-fold biomass difference between the tundra and the tropics, springtail energy use (community metabolism) remains similar across the latitudinal gradient, owing to the changes in temperature with latitude. Neither springtail density nor community metabolism is predicted by local species richness, which is high in the tropics, but comparably high in some temperate forests and even tundra. Changes in springtail activity may emerge from latitudinal gradients in temperature, predation and resource limitation in soil communities. Contrasting relationships of biomass, diversity and activity of springtail communities with temperature suggest that climate warming will alter fundamental soil biodiversity metrics in different directions, potentially restructuring terrestrial food webs and affecting soil functioning.
- Published
- 2023
8. Global patterns in endemicity and vulnerability of soil fungi
- Author
-
Estonian Science Foundation, Novo Nordisk Foundation, Tedersoo, Leho [0000-0002-1635-1249], Zizka, Alexander [0000-0002-1680-9192, Hagh-Doust, Niloufar [0000-0003-0616-5829], Anslan, Sten [0000-0002-2299-454X], Prylutskyi. Oleh [0000-0001-5730-517X], Delgado-Baquerizo, Manuel [0000-0002-6499-576X], Maestre, Fernando T. [0000-0002-7434-4856], Moora, Mari [0000-0002-4819-7506], Zobel, Martin [0000-0001-7957-6704], Espenberg, Mikk [0000-0003-0469-6394], Mander, Ülo [Mander, Ülo], Khalid, Abdul Nasir [0000-0002-5635-8031], Corrales, Adriana [0000-0001-9885-4634], Agan, Ahto [0000-0001-9010-8944], Vasco-Palacios, Aída-M. [0000-0003-0539-9711], Saitta, A. [0000-0002-5670-7780], Sulistyo, Bobby [0000-0002-5203-4822], Furneaux, Brendan [0000-0003-3522-7363], Duarte Ritter, Camila [0000-0002-3371-7425], Nyamukondiwa, Casper [0000-0002-0395-4980], Marín, César [0000-0002-2529-8929], Gohar, Daniyal [0000-0003-0312-1142], Klavina, Darta [0000-0002-1455-9062], Dai, Dong Qin [0000-0001-8935-8807], Machteld Biersma, Elisabeth [0000-0002-9877-2177], Otsing. Eveli [0000-0001-7416-257X], Davydov, Evgeniy A. [0000-0002-2316-8506], Albornoz, Felipe [0000-0001-9526-0945], Buegger, Franz [0000-0003-3526-4711], Zahn, Geoffrey [0000-0002-8691-692X], Bonito, Gregory [0000-0002-7262-8978], Hiiesalu, Inga [0000-0002-5457-2376], Barrio, Isabel [0000-0002-8120-5248], Heilmann-Clausen, Jacob [0000-0003-4713-6004], Kupagme, John [0000-0002-9981-050X], Maciá-Vicente, José [0000-0002-7174-7270], Geml, József [0000-0001-8745-0423], Alatalo, Juha [0000-0001-5084-850X], Álvarez-Manjarrez, Julieta [0000-0002-5581-7443], Põldmaa, Kadri [0000-0002-7936-2455], Runnel, Kadrid [0000-0002-7308-3623], Bråthen, Kari Anne [0000-0003-0942-1074], Pritsch, Karin [0000-0001-6384-2473], Armolaitis, Kęstutis [0000-0001-8295-2440], Panksep, Kristel [0000-0003-4743-6111], Lateef, Adebola A. [0000-0002-0510-7996], Saba, M. [0000-0001-7673-2345], Tuomi, Maria [0000-0002-7154-5177], Gryzenhout, M. [0000-0002-9224-4277], Bauters, Marijn [0000-0003-0978-6639], Wijayawardene, Nalin N. [0000-0003-0522-5498], Yorou, Nourou [0000-0001-6997-811X], Kurina, Olavi [0000-0002-4858-4629], Kohout, Petr [0000-0002-3985-2310], Nilsson, R. H. [0000-0002-8052-0107], Garibay-Orijel, Roberto [0000-0002-6977-7550], Rahimlou, Saleh [0000-0003-0427-1329], Ghosh, Soumya [0000-0002-4945-3516], Mundra, Sunil [0000-0002-0535-118X], Netherway, Tarquin [0000-0002-9049-9225], Henkel, Terry W. [0000-0001-9760-8837], Roslin, Tomas [0000-0002-2957-4791], Fedosov, V. [0000-0002-5331-6346], Lim, Young Woon [0000-0003-2864-3449], Antonelli, Alexandre [0000-0003-1842-9297], Kõljalg, Urmas [0000-0002-5171-1668], Abarenkov, K. [0000-0001-5526-4845, Soudzilovskaia, Nadejda A. [0000-0002-9584-2109], Tedersoo, Leho, Mikryukov, Vladimir, Zizka, Alexander, Bahram, Mohammad, Hagh-Doust, Niloufar, Anslan, Sten, Prylutskyi, Oleh, Delgado-Baquerizo, Manuel, Maestre, Fernando T., Pärn, Jaan, Öpik, Maarja, Yasanthika, W. A. Erand, Lim, Young Woon, Soudzilovskaia, Nadejda A., Antonelli, Alexandre, Kõljalg, Urmas, Abarenkov, K., Moora, Mari, Zobel, Martin, Espenberg, Mikk, Mander, Ülo, Khalid, Abdul Nasir, Corrales, Adriana, Agan, Ahto, Vasco-Palacios, Aída-M., Saitta, A., Rinaldi, Andrea, Sulistyo, Bobby, Tamgnoue, Boris, Furneaux, Brendan, Duarte Ritter, Camila, Nyamukondiwa, Casper, Sharp, Cathy, Marín, César, Gohar, Daniyal, Klavina, Darta, Sharmah, Dipon, Dai, Dong Qin, Nouhra, Eduardo, Machteld Biersma, Elisabeth, Rähn, Elisabeth, Cameron, Erin, Crop, Eske de, Otsing. Eveli, Davydov, Evgeniy A., Albornoz, Felipe, Brearley, Francis, Buegger, Franz, Zahn, Geoffrey, Bonito, Gregory, Hiiesalu, Inga, Barrio, Isabel, Heilmann-Clausen, Jacob, Ankuda, Jelena, Kupagme, John, Maciá-Vicente, José, Djeugap Fovo, Joseph, Geml, József, Alatalo, Juha M., Álvarez-Manjarrez, Julieta, Põldmaa, Kadri, Runnel, Kadrid, Adamson, Kalev, Bråthen, Kari Anne, Pritsch, Karin, Tchan, Kassim I., Armolaitis, Kęstutis, Hyde, K.D., Newsham, Kevin K., Panksep, Kristel, Lateef, Adebola A., Tiirmann, Liis, Hansson, Linda, Lamit, Louis J., Saba, M., Tuomi, Maria, Gryzenhout, M., Bauters, Marijn, Piepenbring, M., Wijayawardene, Nalin N., Yorou, Nourou, Kurina, Olavi, Mortimer, Peter, Meidl, Peter, Kohout, Petr, Nilsson, R. H., Puusepp, Rasmus, Drenkhan, Rein, Garibay-Orijel, Roberto, Godoy, Roberto, Alkahtani, Saad, Rahimlou, Saleh, Dudov, Sergey V., Põlme, S., Ghosh, Soumya, Mundra, Sunil, Ahmed, Talaat, Netherway, Tarquin, Roslin, Tomas, Nteziryayo, Vincent, Fedosov, V., Onipchenko, Vladimir G., Estonian Science Foundation, Novo Nordisk Foundation, Tedersoo, Leho [0000-0002-1635-1249], Zizka, Alexander [0000-0002-1680-9192, Hagh-Doust, Niloufar [0000-0003-0616-5829], Anslan, Sten [0000-0002-2299-454X], Prylutskyi. Oleh [0000-0001-5730-517X], Delgado-Baquerizo, Manuel [0000-0002-6499-576X], Maestre, Fernando T. [0000-0002-7434-4856], Moora, Mari [0000-0002-4819-7506], Zobel, Martin [0000-0001-7957-6704], Espenberg, Mikk [0000-0003-0469-6394], Mander, Ülo [Mander, Ülo], Khalid, Abdul Nasir [0000-0002-5635-8031], Corrales, Adriana [0000-0001-9885-4634], Agan, Ahto [0000-0001-9010-8944], Vasco-Palacios, Aída-M. [0000-0003-0539-9711], Saitta, A. [0000-0002-5670-7780], Sulistyo, Bobby [0000-0002-5203-4822], Furneaux, Brendan [0000-0003-3522-7363], Duarte Ritter, Camila [0000-0002-3371-7425], Nyamukondiwa, Casper [0000-0002-0395-4980], Marín, César [0000-0002-2529-8929], Gohar, Daniyal [0000-0003-0312-1142], Klavina, Darta [0000-0002-1455-9062], Dai, Dong Qin [0000-0001-8935-8807], Machteld Biersma, Elisabeth [0000-0002-9877-2177], Otsing. Eveli [0000-0001-7416-257X], Davydov, Evgeniy A. [0000-0002-2316-8506], Albornoz, Felipe [0000-0001-9526-0945], Buegger, Franz [0000-0003-3526-4711], Zahn, Geoffrey [0000-0002-8691-692X], Bonito, Gregory [0000-0002-7262-8978], Hiiesalu, Inga [0000-0002-5457-2376], Barrio, Isabel [0000-0002-8120-5248], Heilmann-Clausen, Jacob [0000-0003-4713-6004], Kupagme, John [0000-0002-9981-050X], Maciá-Vicente, José [0000-0002-7174-7270], Geml, József [0000-0001-8745-0423], Alatalo, Juha [0000-0001-5084-850X], Álvarez-Manjarrez, Julieta [0000-0002-5581-7443], Põldmaa, Kadri [0000-0002-7936-2455], Runnel, Kadrid [0000-0002-7308-3623], Bråthen, Kari Anne [0000-0003-0942-1074], Pritsch, Karin [0000-0001-6384-2473], Armolaitis, Kęstutis [0000-0001-8295-2440], Panksep, Kristel [0000-0003-4743-6111], Lateef, Adebola A. [0000-0002-0510-7996], Saba, M. [0000-0001-7673-2345], Tuomi, Maria [0000-0002-7154-5177], Gryzenhout, M. [0000-0002-9224-4277], Bauters, Marijn [0000-0003-0978-6639], Wijayawardene, Nalin N. [0000-0003-0522-5498], Yorou, Nourou [0000-0001-6997-811X], Kurina, Olavi [0000-0002-4858-4629], Kohout, Petr [0000-0002-3985-2310], Nilsson, R. H. [0000-0002-8052-0107], Garibay-Orijel, Roberto [0000-0002-6977-7550], Rahimlou, Saleh [0000-0003-0427-1329], Ghosh, Soumya [0000-0002-4945-3516], Mundra, Sunil [0000-0002-0535-118X], Netherway, Tarquin [0000-0002-9049-9225], Henkel, Terry W. [0000-0001-9760-8837], Roslin, Tomas [0000-0002-2957-4791], Fedosov, V. [0000-0002-5331-6346], Lim, Young Woon [0000-0003-2864-3449], Antonelli, Alexandre [0000-0003-1842-9297], Kõljalg, Urmas [0000-0002-5171-1668], Abarenkov, K. [0000-0001-5526-4845, Soudzilovskaia, Nadejda A. [0000-0002-9584-2109], Tedersoo, Leho, Mikryukov, Vladimir, Zizka, Alexander, Bahram, Mohammad, Hagh-Doust, Niloufar, Anslan, Sten, Prylutskyi, Oleh, Delgado-Baquerizo, Manuel, Maestre, Fernando T., Pärn, Jaan, Öpik, Maarja, Yasanthika, W. A. Erand, Lim, Young Woon, Soudzilovskaia, Nadejda A., Antonelli, Alexandre, Kõljalg, Urmas, Abarenkov, K., Moora, Mari, Zobel, Martin, Espenberg, Mikk, Mander, Ülo, Khalid, Abdul Nasir, Corrales, Adriana, Agan, Ahto, Vasco-Palacios, Aída-M., Saitta, A., Rinaldi, Andrea, Sulistyo, Bobby, Tamgnoue, Boris, Furneaux, Brendan, Duarte Ritter, Camila, Nyamukondiwa, Casper, Sharp, Cathy, Marín, César, Gohar, Daniyal, Klavina, Darta, Sharmah, Dipon, Dai, Dong Qin, Nouhra, Eduardo, Machteld Biersma, Elisabeth, Rähn, Elisabeth, Cameron, Erin, Crop, Eske de, Otsing. Eveli, Davydov, Evgeniy A., Albornoz, Felipe, Brearley, Francis, Buegger, Franz, Zahn, Geoffrey, Bonito, Gregory, Hiiesalu, Inga, Barrio, Isabel, Heilmann-Clausen, Jacob, Ankuda, Jelena, Kupagme, John, Maciá-Vicente, José, Djeugap Fovo, Joseph, Geml, József, Alatalo, Juha M., Álvarez-Manjarrez, Julieta, Põldmaa, Kadri, Runnel, Kadrid, Adamson, Kalev, Bråthen, Kari Anne, Pritsch, Karin, Tchan, Kassim I., Armolaitis, Kęstutis, Hyde, K.D., Newsham, Kevin K., Panksep, Kristel, Lateef, Adebola A., Tiirmann, Liis, Hansson, Linda, Lamit, Louis J., Saba, M., Tuomi, Maria, Gryzenhout, M., Bauters, Marijn, Piepenbring, M., Wijayawardene, Nalin N., Yorou, Nourou, Kurina, Olavi, Mortimer, Peter, Meidl, Peter, Kohout, Petr, Nilsson, R. H., Puusepp, Rasmus, Drenkhan, Rein, Garibay-Orijel, Roberto, Godoy, Roberto, Alkahtani, Saad, Rahimlou, Saleh, Dudov, Sergey V., Põlme, S., Ghosh, Soumya, Mundra, Sunil, Ahmed, Talaat, Netherway, Tarquin, Roslin, Tomas, Nteziryayo, Vincent, Fedosov, V., and Onipchenko, Vladimir G.
- Abstract
Fungi are highly diverse organisms, which provide multiple ecosystem services. However, compared with charismatic animals and plants, the distribution patterns and conservation needs of fungi have been little explored. Here, we examined endemicity patterns, global change vulnerability and conservation priority areas for functional groups of soil fungi based on six global surveys using a high-resolution, long-read metabarcoding approach. We found that the endemicity of all fungi and most functional groups peaks in tropical habitats, including Amazonia, Yucatan, West-Central Africa, Sri Lanka, and New Caledonia, with a negligible island effect compared with plants and animals. We also found that fungi are predominantly vulnerable to drought, heat and land-cover change, particularly in dry tropical regions with high human population density. Fungal conservation areas of highest priority include herbaceous wetlands, tropical forests, and woodlands. We stress that more attention should be focused on the conservation of fungi, especially root symbiotic arbuscular mycorrhizal and ectomycorrhizal fungi in tropical regions as well as unicellular early-diverging groups and macrofungi in general. Given the low overlap between the endemicity of fungi and macroorganisms, but high conservation needs in both groups, detailed analyses on distribution and conservation requirements are warranted for other microorganisms and soil organisms.
- Published
- 2022
9. Global data on earthworm abundance, biomass, diversity and corresponding environmental properties
- Author
-
German Research Foundation, European Commission, Academy of Finland, Natural Sciences and Engineering Research Council of Canada, Federal Ministry of Education and Research (Germany), European Research Council, Labex TULIP, Agence Nationale de la Recherche (France), Biotechnology and Biological Sciences Research Council (UK), Russian Foundation for Basic Research, Tarbiat Modares University, Aurora Organic Dairy, Slovak Research and Development Agency, Wageningen University and Research Centre, International Atomic Energy Agency, Fundação de Amparo à Pesquisa do Estado de São Paulo, Oklahoma State University, CSIC - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Royal Canadian Geographical Society, Environmental Protection Agency (Ireland), University of Hawaii at Manoa, U.S. Navy, Department of Science and Technology (India), Department of Defense (US), Fundação de Amparo à Pesquisa e ao Desenvolvimento Científico e Tecnológico do Maranhão, Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (Brasil), Ministry of Education, Youth and Sports (Czech Republic), Colorado Wheat Research Foundation, Zone Atelier Alpes, Austrian Science Fund, Rentenbank, Welsh Government, European Agricultural Fund for Rural Development, Finnish Ministry of Agriculture and Forestry, Science Foundation Ireland, University of Toronto, Haliburton Forest & Wildlife Reserve, Arts and Sciences, Northern Kentucky University, University of Innsbruck, Higher Education Commission (Pakistan), Kerala Forest Research Institute, Universidad Complutense de Madrid, Consejo Nacional de Investigaciones Científicas y Técnicas (Argentina), Fondo para la Investigación Científica y Tecnológica (Argentina), Universidad Nacional de Luján, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Fonds de Recherche du Québec, Institute for Environmental Science and Policy, University of Illinois, Casey Tree, College of Liberal Arts and Social Sciences, DePaul University, Comisión Interministerial de Ciencia y Tecnología, CICYT (España), Japan Society for the Promotion of Science, McKnight Foundation, Russian Academy of Sciences, Conselho Nacional de Desenvolvimento Científico e Tecnológico (Brasil), Ministère de l'Europe et des Affaires étrangères (France), Bavarian Ministry for Food, Agriculture and Forestry, Ministero dell'Istruzione, dell'Università e della Ricerca, Idaho Agricultural Experiment Station, Estonian Science Foundation, Ministry of the Environment, Conservation and Parks (Ontario), National Natural Science Foundation of China, Australian Research Council, Phillips, Helen, R. P., Bach, Elizabeth M., Bartz, Marie L. C., Bennett, Joanne, Beugnon, Rémy, Briones, María J. I., Brown, George, Ferlian, Olga, Gongalsky, Konstantin B., Guerra, Carlos A., König-Ries, Birgitta, Holdsworth, Andrew R., Coors, Anja, Crotty, Felicity V., Crumsey, Jasmine M., Dávalos, Andrea, Diaz Cosin, Darío J., Loss, Scott R., Dobson, Annise M., Dominguez, Anahí, Esteban Duhour, Andrés, Schirrmann, Michael, Eekeren, Nick van, Holmstrup, Martin, Emmerling, Christoph, Falco, Liliana B., Fernández, Rosa, Fonte, Steven J., Fragoso, Carlos, Franco, André L. C., Marichal, Raphael, Fusilero, Abegail T., Moreno, Gerardo, Geraskina, Anna P., Gholami, Shaieste, Hopfensperger, Kristine N., González, Grizelle, Gundale, Michael J., Gutiérrez López, Mónica, Hackenberger, Branimir K., Hackenberger, Davorka K., Hernández, Luis M., Hirth, Jeff R., Morón-Ríos, Alejandro, Huerta Lwanga, Esperanza, Huhta, Veikko, Hurisso, Tunsisa T., Iannone III, Basil V., Iordache, Madalina, Ramirez, Kelly S., Irmler, Ulrich, Minamiya, Yukio, Ivask, Mari, Jesus Lidon, Juan B., Motohiro, Hasegawa, Johnson-Maynard, Jodi L., Joschko, Monika, Kaneko, Nobuhiro, Kanianska, Radoslava, Keith, Aidan M., Kernecker, Maria L., Scharenbroch, Bryant C., Koné, Armand W., Kooch, Yahya, Hendrik Moos, Jan, Muys, Bart, Kukkonen, Sanna T., Lalthanzara, H., Lammel, Daniel R., Lebedev, Iurii M., Le Cadre, Edith, Lincoln, Noa K., López-Hernández, Danilo, Neirynck, Johan, Krebs, Julia, Norgrove, Lindsey, Novo, Marta, Nuutinen, Visa, Choi, Amy, Nuzzo, Victoria, Schmidt, Olaf, Rahman, P. Mujeeb, Pansu, Johan, Paudel, Shishir, Pérès, Guénola, Pérez-Camacho, Lorenzo, Ponge, Jean-François, Orgiazzi, Alberto, Prietzel, Jörg, Wall, Diana H., Rapoport, Irina B., Imtiaz Rashid, Muhammad, Schröder, Boris, Rebollo, Salvador, Rodríguez, Miguel Á., Roth, Alexander M., Rousseau, Guillaume X., Rozen, Anna, Sayad, Ehsan, Schaik, Loes van, Brose, Ulrich, Seeber, Julia, Shashkov, Maxim P., Singh, Jaswinder, Smith, Sandy M., Steinwandter, Michael, Capowiez, Yvan, Szlavecz, Katalin, Russell, David, Talavera, José A., Trigo, Dolores, Decaëns, Thibaud, Tsukamoto, Jiro, Uribe-López, Sheila, Valença, Anne W. de, Virto, Iñigo, Wackett, Adrian A., Warren, Matthew W., Cavagnaro, Timothy R., Webster, Emily R., Wehr, Nathaniel H., Schwarz, Benjamin, Lavelle, Patrick, Wironen, Michael B., Wolters, Volkmar, Wu, Pengfei, Zenkova, Irina V. Z., Zhang, Weixin, Cameron, Erin K., Eisenhauer, Nico, Loreau, Michel, Mathieu, Jérôme, Mulder, Christian, Putten, Wim H. van der, Rillig, Matthias C., Matula, Radim, Thakur, Madhav P., Clause, Julia, Vries, Franciska T. de, Wardle, David A., Ammer, Sabine, Arai, Miwa, Ayuke, Fredrick O., Baker, Geoff H., Baretta, Dilmar, Barkusky, Dietmar, Hishi, Takuo, Beauséjour, Robin, Bedano, José C., Cluzeau, Daniel, Birkhofer, Klaus, Blanchart, Eric, Blossey, Bernd, Bolger, Thomas, Bradley, Robert L., Brossard, Michel, Burtis, James C., German Research Foundation, European Commission, Academy of Finland, Natural Sciences and Engineering Research Council of Canada, Federal Ministry of Education and Research (Germany), European Research Council, Labex TULIP, Agence Nationale de la Recherche (France), Biotechnology and Biological Sciences Research Council (UK), Russian Foundation for Basic Research, Tarbiat Modares University, Aurora Organic Dairy, Slovak Research and Development Agency, Wageningen University and Research Centre, International Atomic Energy Agency, Fundação de Amparo à Pesquisa do Estado de São Paulo, Oklahoma State University, CSIC - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Royal Canadian Geographical Society, Environmental Protection Agency (Ireland), University of Hawaii at Manoa, U.S. Navy, Department of Science and Technology (India), Department of Defense (US), Fundação de Amparo à Pesquisa e ao Desenvolvimento Científico e Tecnológico do Maranhão, Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (Brasil), Ministry of Education, Youth and Sports (Czech Republic), Colorado Wheat Research Foundation, Zone Atelier Alpes, Austrian Science Fund, Rentenbank, Welsh Government, European Agricultural Fund for Rural Development, Finnish Ministry of Agriculture and Forestry, Science Foundation Ireland, University of Toronto, Haliburton Forest & Wildlife Reserve, Arts and Sciences, Northern Kentucky University, University of Innsbruck, Higher Education Commission (Pakistan), Kerala Forest Research Institute, Universidad Complutense de Madrid, Consejo Nacional de Investigaciones Científicas y Técnicas (Argentina), Fondo para la Investigación Científica y Tecnológica (Argentina), Universidad Nacional de Luján, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Fonds de Recherche du Québec, Institute for Environmental Science and Policy, University of Illinois, Casey Tree, College of Liberal Arts and Social Sciences, DePaul University, Comisión Interministerial de Ciencia y Tecnología, CICYT (España), Japan Society for the Promotion of Science, McKnight Foundation, Russian Academy of Sciences, Conselho Nacional de Desenvolvimento Científico e Tecnológico (Brasil), Ministère de l'Europe et des Affaires étrangères (France), Bavarian Ministry for Food, Agriculture and Forestry, Ministero dell'Istruzione, dell'Università e della Ricerca, Idaho Agricultural Experiment Station, Estonian Science Foundation, Ministry of the Environment, Conservation and Parks (Ontario), National Natural Science Foundation of China, Australian Research Council, Phillips, Helen, R. P., Bach, Elizabeth M., Bartz, Marie L. C., Bennett, Joanne, Beugnon, Rémy, Briones, María J. I., Brown, George, Ferlian, Olga, Gongalsky, Konstantin B., Guerra, Carlos A., König-Ries, Birgitta, Holdsworth, Andrew R., Coors, Anja, Crotty, Felicity V., Crumsey, Jasmine M., Dávalos, Andrea, Diaz Cosin, Darío J., Loss, Scott R., Dobson, Annise M., Dominguez, Anahí, Esteban Duhour, Andrés, Schirrmann, Michael, Eekeren, Nick van, Holmstrup, Martin, Emmerling, Christoph, Falco, Liliana B., Fernández, Rosa, Fonte, Steven J., Fragoso, Carlos, Franco, André L. C., Marichal, Raphael, Fusilero, Abegail T., Moreno, Gerardo, Geraskina, Anna P., Gholami, Shaieste, Hopfensperger, Kristine N., González, Grizelle, Gundale, Michael J., Gutiérrez López, Mónica, Hackenberger, Branimir K., Hackenberger, Davorka K., Hernández, Luis M., Hirth, Jeff R., Morón-Ríos, Alejandro, Huerta Lwanga, Esperanza, Huhta, Veikko, Hurisso, Tunsisa T., Iannone III, Basil V., Iordache, Madalina, Ramirez, Kelly S., Irmler, Ulrich, Minamiya, Yukio, Ivask, Mari, Jesus Lidon, Juan B., Motohiro, Hasegawa, Johnson-Maynard, Jodi L., Joschko, Monika, Kaneko, Nobuhiro, Kanianska, Radoslava, Keith, Aidan M., Kernecker, Maria L., Scharenbroch, Bryant C., Koné, Armand W., Kooch, Yahya, Hendrik Moos, Jan, Muys, Bart, Kukkonen, Sanna T., Lalthanzara, H., Lammel, Daniel R., Lebedev, Iurii M., Le Cadre, Edith, Lincoln, Noa K., López-Hernández, Danilo, Neirynck, Johan, Krebs, Julia, Norgrove, Lindsey, Novo, Marta, Nuutinen, Visa, Choi, Amy, Nuzzo, Victoria, Schmidt, Olaf, Rahman, P. Mujeeb, Pansu, Johan, Paudel, Shishir, Pérès, Guénola, Pérez-Camacho, Lorenzo, Ponge, Jean-François, Orgiazzi, Alberto, Prietzel, Jörg, Wall, Diana H., Rapoport, Irina B., Imtiaz Rashid, Muhammad, Schröder, Boris, Rebollo, Salvador, Rodríguez, Miguel Á., Roth, Alexander M., Rousseau, Guillaume X., Rozen, Anna, Sayad, Ehsan, Schaik, Loes van, Brose, Ulrich, Seeber, Julia, Shashkov, Maxim P., Singh, Jaswinder, Smith, Sandy M., Steinwandter, Michael, Capowiez, Yvan, Szlavecz, Katalin, Russell, David, Talavera, José A., Trigo, Dolores, Decaëns, Thibaud, Tsukamoto, Jiro, Uribe-López, Sheila, Valença, Anne W. de, Virto, Iñigo, Wackett, Adrian A., Warren, Matthew W., Cavagnaro, Timothy R., Webster, Emily R., Wehr, Nathaniel H., Schwarz, Benjamin, Lavelle, Patrick, Wironen, Michael B., Wolters, Volkmar, Wu, Pengfei, Zenkova, Irina V. Z., Zhang, Weixin, Cameron, Erin K., Eisenhauer, Nico, Loreau, Michel, Mathieu, Jérôme, Mulder, Christian, Putten, Wim H. van der, Rillig, Matthias C., Matula, Radim, Thakur, Madhav P., Clause, Julia, Vries, Franciska T. de, Wardle, David A., Ammer, Sabine, Arai, Miwa, Ayuke, Fredrick O., Baker, Geoff H., Baretta, Dilmar, Barkusky, Dietmar, Hishi, Takuo, Beauséjour, Robin, Bedano, José C., Cluzeau, Daniel, Birkhofer, Klaus, Blanchart, Eric, Blossey, Bernd, Bolger, Thomas, Bradley, Robert L., Brossard, Michel, and Burtis, James C.
- Abstract
Earthworms are an important soil taxon as ecosystem engineers, providing a variety of crucial ecosystem functions and services. Little is known about their diversity and distribution at large spatial scales, despite the availability of considerable amounts of local-scale data. Earthworm diversity data, obtained from the primary literature or provided directly by authors, were collated with information on site locations, including coordinates, habitat cover, and soil properties. Datasets were required, at a minimum, to include abundance or biomass of earthworms at a site. Where possible, site-level species lists were included, as well as the abundance and biomass of individual species and ecological groups. This global dataset contains 10,840 sites, with 184 species, from 60 countries and all continents except Antarctica. The data were obtained from 182 published articles, published between 1973 and 2017, and 17 unpublished datasets. Amalgamating data into a single global database will assist researchers in investigating and answering a wide variety of pressing questions, for example, jointly assessing aboveground and belowground biodiversity distributions and drivers of biodiversity change.
- Published
- 2021
10. Global homogenization of the structure and function in the soil microbiome of urban greenspaces
- Author
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Fundación BBVA, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), National Science Foundation (US), Estonian Science Foundation, Alexander von Humboldt Foundation, Australian Research Council, Fondo Nacional de Desarrollo Científico y Tecnológico (Chile), European Commission, Consejo Superior de Investigaciones Científicas (España), Fundación Séneca, National Research Foundation (South Africa), Slovenian Research Agency, Fundação para a Ciência e a Tecnologia (Portugal), Ministério da Ciência, Tecnologia e Ensino Superior (Portugal), Science and Engineering Research Board (India), Delgado-Baquerizo, Manuel, Eldridge, David J., Liu, Yu-Rong, Sokoya, Blessing, Wang, Jun-Tao, Hu, Hang-Wei, He, Ji-Zheng, Bastida, F., Moreno-Ortego, Jose Luis, Bamigboye, Adebola R., Blanco-Pastor, José Luis, Cano-Díaz, Concha, Illán, Javier, G., Makhalanyane, Thulani P., Siebe, Christina, Trivedi, Pankaj, Zaady, Eli, Verma, Jay Prakash, Wang, Ling, Wang, Jianyong, Grebenc, Tine, Peñaloza-Bojacá, Gabriel F., Nahberger, Tina U., Teixido, Alberto L., Zhou, Xin-Quan, Berdugo, Miguel, Durán, Jorge, Rodríguez-Pereiras, Alexandra, Zhou, Xiaobing, Alfaro, Fernando D., Abades, Sebastián, Plaza de Carlos, César, Rey, Ana, Singh, Brajesh K., Tedersoo, Leho, Fierer, Noah, Fundación BBVA, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), National Science Foundation (US), Estonian Science Foundation, Alexander von Humboldt Foundation, Australian Research Council, Fondo Nacional de Desarrollo Científico y Tecnológico (Chile), European Commission, Consejo Superior de Investigaciones Científicas (España), Fundación Séneca, National Research Foundation (South Africa), Slovenian Research Agency, Fundação para a Ciência e a Tecnologia (Portugal), Ministério da Ciência, Tecnologia e Ensino Superior (Portugal), Science and Engineering Research Board (India), Delgado-Baquerizo, Manuel, Eldridge, David J., Liu, Yu-Rong, Sokoya, Blessing, Wang, Jun-Tao, Hu, Hang-Wei, He, Ji-Zheng, Bastida, F., Moreno-Ortego, Jose Luis, Bamigboye, Adebola R., Blanco-Pastor, José Luis, Cano-Díaz, Concha, Illán, Javier, G., Makhalanyane, Thulani P., Siebe, Christina, Trivedi, Pankaj, Zaady, Eli, Verma, Jay Prakash, Wang, Ling, Wang, Jianyong, Grebenc, Tine, Peñaloza-Bojacá, Gabriel F., Nahberger, Tina U., Teixido, Alberto L., Zhou, Xin-Quan, Berdugo, Miguel, Durán, Jorge, Rodríguez-Pereiras, Alexandra, Zhou, Xiaobing, Alfaro, Fernando D., Abades, Sebastián, Plaza de Carlos, César, Rey, Ana, Singh, Brajesh K., Tedersoo, Leho, and Fierer, Noah
- Abstract
The structure and function of the soil microbiome of urban greenspaces remain largely undetermined. We conducted a global field survey in urban greenspaces and neighboring natural ecosystems across 56 cities from six continents, and found that urban soils are important hotspots for soil bacterial, protist and functional gene diversity, but support highly homogenized microbial communities worldwide. Urban greenspaces had a greater proportion of fast-growing bacteria, algae, amoebae, and fungal pathogens, but a lower proportion of ectomycorrhizal fungi than natural ecosystems. These urban ecosystems also showed higher proportions of genes associated with human pathogens, greenhouse gas emissions, faster nutrient cycling, and more intense abiotic stress than natural environments. City affluence, management practices, and climate were fundamental drivers of urban soil communities. Our work paves the way toward a more comprehensive global-scale perspective on urban greenspaces, which is integral to managing the health of these ecosystems and the well-being of human populations.
- Published
- 2021
11. Global geographic distribution and host range of fusarium circinatum, the causal agent of pine pitch canker
- Author
-
European Commission, Estonian Science Foundation, Agence Nationale de la Recherche (France), Scottish Government, Office fédéral de l'environnement (Suisse), Martín-García, Jorge [0000-0002-3057-3710], Vahalík, P. [0000-0003-3404-3095], Adamson, K. [0000-0002-8810-8838], Adamčikova, K. [0000-0001-5407-5233], Ahumada, Rodrigo [0000-0002-2397-2721], Blank, Lior [0000-0002-8753-0113], Bragança, H. [0000-0002-7957-5493], Capretti, P. [0000-0002-1893-9871], Cleary, M. [0000-0002-0318-5974], Cornejo, Carolina [0000-0003-3259-6198], Davydenko, K. [0000-0001-6077-8533], Díez, Julio Javier [0000-0003-0558-8141], Doǧmuş-Lehtijärvi, Hatice T. [0000-0002-1050-8823], Dvorák, Milon [0000-0002-4390-4718], Enderle, R. [0000-0002-3436-9581], Fourie, Gerda [0000-0003-2650-5448], Georgieva, M. [0000-0003-3165-1992], Ghelardini, L. [0000-0002-3180-4226], Hantula, Jarkko [0000-0002-1016-0636], Ioos, Renaud [0000-0001-9359-5098], Iturritxa, Eugenia [0000-0002-6390-5873], Kanetis, Loukas [0000-0002-1869-558X], Karpun, Natalia N. [0000-0002-7696-3618], Koltay, András [0000-0001-6865-2601], Markovskaja, S. [0000-0003-3111-6949], Mesanza, Nebai [0000-0002-1578-9193], Milenkovic, Ivan [0000-0003-2792-0221], Musolin, Dmitry L. [0000-0002-3913-3674], Nowakowska, Justyna A. [0000-0001-5863-053X], Ogris, N. [0000-0002-4058-9417], Oskay, F. [0000-0002-8918-5595], Oszako, Tomasz [0000-0003-4688-2582], Papazova-Anakieva, Irena [0000-0002-7260-4685], Paraschiv, Marius [0000-0001-6916-8600], Pasquali, Matias [0000-0002-9102-2066], Pecori, Francesco [0000-0002-6577-7190], Rafoss, Trond [0000-0002-8489-4771], Raitelaitytė, K. [0000-0001-9753-9712], Raposo Llobet, María Rosa [0000-0002-4893-6874], Robin, Cecile [0000-0002-8145-245X], Rodas, Carlos A. [0000-0002-8895-8883], Sanz-Ros, Antonio V. [0000-0002-4791-8308], Selikhovkin, Andrey V. [0000-0003-4227-9647], Solla, A. [0000-0002-2596-1612], Soukainen, M. [0000-0001-6686-0191], Soulioti, Nikoleta [0000-0001-5011-0863], Steenkamp, Emma T. [0000-0003-0217-8219], Tsopelas, Panaghiotis [0000-0002-7853-4534], Vemic, Aleksandar [0000-0001-9195-8967], Vettraino, A. M. [0000-0003-0797-3297], Wingfield, Michael J. [0000-0001-9346-2009], Woodward, Stephen [0000-0002-6627-7702], Zamora-Ballesteros, Cristina [0000-0002-9728-5553], Mullett, M. [0000-0002-6013-0347], Drenkhan, R., Ganley, Beccy, Martín-García, Jorge, Vahalík, P., Adamson, K., Adamčikova, K., Ahumada, Rodrigo, Blank, Lior, Bragança, H., Capretti, P., Cleary, M., Cornejo, Carolina, Davydenko, K., Díez, Julio Javier, Doǧmuş-Lehtijärvi, Hatice T., Dvorák, Milon, Enderle, R., Fourie, Gerda, Georgieva, M., Ghelardini, L., Hantula, Jarkko, Ioos, Renaud, Iturritxa, Eugenia, Kanetis, Loukas, Karpun, Natalia N., Koltay, András, Landeras, Elena, Markovskaja, S., Mesanza, Nebai, Milenkovic, Ivan, Musolin, Dmitry L., Nikolaou, Konstantinos, Nowakowska, Justyna A., Ogris, N., Oskay, F., Oszako, Tomasz, Papazova-Anakieva, Irena, Paraschiv, Marius, Pasquali, Matias, Pecori, Francesco, Rafoss, Trond, Raitelaitytė, K., Raposo Llobet, María Rosa, Robin, Cecile, Rodas, Carlos A., Santini, Alberto, Sanz-Ros, Antonio V., Selikhovkin, Andrey V., Solla, A., Soukainen, M., Soulioti, Nikoleta, Steenkamp, Emma T., Tsopelas, Panaghiotis, Vemic, Aleksandar, Vettraino, A. M., Wingfield, Michael J., Woodward, Stephen, Zamora-Ballesteros, Cristina, Mullett, M., European Commission, Estonian Science Foundation, Agence Nationale de la Recherche (France), Scottish Government, Office fédéral de l'environnement (Suisse), Martín-García, Jorge [0000-0002-3057-3710], Vahalík, P. [0000-0003-3404-3095], Adamson, K. [0000-0002-8810-8838], Adamčikova, K. [0000-0001-5407-5233], Ahumada, Rodrigo [0000-0002-2397-2721], Blank, Lior [0000-0002-8753-0113], Bragança, H. [0000-0002-7957-5493], Capretti, P. [0000-0002-1893-9871], Cleary, M. [0000-0002-0318-5974], Cornejo, Carolina [0000-0003-3259-6198], Davydenko, K. [0000-0001-6077-8533], Díez, Julio Javier [0000-0003-0558-8141], Doǧmuş-Lehtijärvi, Hatice T. [0000-0002-1050-8823], Dvorák, Milon [0000-0002-4390-4718], Enderle, R. [0000-0002-3436-9581], Fourie, Gerda [0000-0003-2650-5448], Georgieva, M. [0000-0003-3165-1992], Ghelardini, L. [0000-0002-3180-4226], Hantula, Jarkko [0000-0002-1016-0636], Ioos, Renaud [0000-0001-9359-5098], Iturritxa, Eugenia [0000-0002-6390-5873], Kanetis, Loukas [0000-0002-1869-558X], Karpun, Natalia N. [0000-0002-7696-3618], Koltay, András [0000-0001-6865-2601], Markovskaja, S. [0000-0003-3111-6949], Mesanza, Nebai [0000-0002-1578-9193], Milenkovic, Ivan [0000-0003-2792-0221], Musolin, Dmitry L. [0000-0002-3913-3674], Nowakowska, Justyna A. [0000-0001-5863-053X], Ogris, N. [0000-0002-4058-9417], Oskay, F. [0000-0002-8918-5595], Oszako, Tomasz [0000-0003-4688-2582], Papazova-Anakieva, Irena [0000-0002-7260-4685], Paraschiv, Marius [0000-0001-6916-8600], Pasquali, Matias [0000-0002-9102-2066], Pecori, Francesco [0000-0002-6577-7190], Rafoss, Trond [0000-0002-8489-4771], Raitelaitytė, K. [0000-0001-9753-9712], Raposo Llobet, María Rosa [0000-0002-4893-6874], Robin, Cecile [0000-0002-8145-245X], Rodas, Carlos A. [0000-0002-8895-8883], Sanz-Ros, Antonio V. [0000-0002-4791-8308], Selikhovkin, Andrey V. [0000-0003-4227-9647], Solla, A. [0000-0002-2596-1612], Soukainen, M. [0000-0001-6686-0191], Soulioti, Nikoleta [0000-0001-5011-0863], Steenkamp, Emma T. [0000-0003-0217-8219], Tsopelas, Panaghiotis [0000-0002-7853-4534], Vemic, Aleksandar [0000-0001-9195-8967], Vettraino, A. M. [0000-0003-0797-3297], Wingfield, Michael J. [0000-0001-9346-2009], Woodward, Stephen [0000-0002-6627-7702], Zamora-Ballesteros, Cristina [0000-0002-9728-5553], Mullett, M. [0000-0002-6013-0347], Drenkhan, R., Ganley, Beccy, Martín-García, Jorge, Vahalík, P., Adamson, K., Adamčikova, K., Ahumada, Rodrigo, Blank, Lior, Bragança, H., Capretti, P., Cleary, M., Cornejo, Carolina, Davydenko, K., Díez, Julio Javier, Doǧmuş-Lehtijärvi, Hatice T., Dvorák, Milon, Enderle, R., Fourie, Gerda, Georgieva, M., Ghelardini, L., Hantula, Jarkko, Ioos, Renaud, Iturritxa, Eugenia, Kanetis, Loukas, Karpun, Natalia N., Koltay, András, Landeras, Elena, Markovskaja, S., Mesanza, Nebai, Milenkovic, Ivan, Musolin, Dmitry L., Nikolaou, Konstantinos, Nowakowska, Justyna A., Ogris, N., Oskay, F., Oszako, Tomasz, Papazova-Anakieva, Irena, Paraschiv, Marius, Pasquali, Matias, Pecori, Francesco, Rafoss, Trond, Raitelaitytė, K., Raposo Llobet, María Rosa, Robin, Cecile, Rodas, Carlos A., Santini, Alberto, Sanz-Ros, Antonio V., Selikhovkin, Andrey V., Solla, A., Soukainen, M., Soulioti, Nikoleta, Steenkamp, Emma T., Tsopelas, Panaghiotis, Vemic, Aleksandar, Vettraino, A. M., Wingfield, Michael J., Woodward, Stephen, Zamora-Ballesteros, Cristina, and Mullett, M.
- Abstract
Fusarium circinatum, the causal agent of pine pitch canker (PPC), is currently one of the most important threats of Pinus spp. globally. This pathogen is known in many pine-growing regions, including natural and planted forests, and can affect all life stages of trees, from emerging seedlings to mature trees. Despite the importance of PPC, the global distribution of F. circinatum is poorly documented, and this problem is also true of the hosts within countries that are affected. The aim of this study was to review the global distribution of F. circinatum, with a particular focus on Europe. We considered (1) the current and historical pathogen records, both positive and negative, based on confirmed reports from Europe and globally; (2) the genetic diversity and population structure of the pathogen; (3) the current distribution of PPC in Europe, comparing published models of predicted disease distribution; and (4) host susceptibility by reviewing literature and generating a comprehensive list of known hosts for the fungus. These data were collated from 41 countries and used to compile a specially constructed geo-database. A review of 6297 observation records showed that F. circinatum and the symptoms it causes on conifers occurred in 14 countries, including four in Europe, and is absent in 28 countries. Field observations and experimental data from 138 host species revealed 106 susceptible host species including 85 Pinus species, 6 non-pine tree species and 15 grass and herb species. Our data confirm that susceptibility to F. circinatum varies between different host species, tree ages and environmental characteristics. Knowledge on the geographic distribution, host range and the relative susceptibility of different hosts is essential for disease management, mitigation and containment strategies. The findings reported in this review will support countries that are currently free of F. circinatum in implementing effective procedures and restrictions and prevent further
- Published
- 2020
12. Transferability of PCR-based diagnostic protocols: An international collaborative case study assessing protocols targeting the quarantine pine pathogen Fusarium circinatum
- Author
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Universitat Politècnica de València. Instituto Agroforestal Mediterráneo - Institut Agroforestal Mediterrani, Estonian Science Foundation, Forestry Commission, Reino Unido, Slovenian Research Agency, European Cooperation in Science and Technology, Ministry for Primary Industries, Nueva Zelanda, Fundação para a Ciência e a Tecnologia, Portugal, Ministry of Agriculture, Forestry and Food, Eslovenia, Instituto Nacional de Investigação Agrária e Veterinária, Portugal, Agence Nationale de Sécurité Sanitaire de l'Alimentation, de l'Environnement et du Travail, Francia, Ioos, R., Aloi, F., Piskur, B., Guinet, C., Mullett, M., Berbegal Martinez, Monica, Bragança, H., Cacciola, S.O., Oskay, F., Cornejo, C., Adamson, K., Kacergius, A., Martínez-Álvarez, P., Nowakowska, J.A., Luchi, N., Universitat Politècnica de València. Instituto Agroforestal Mediterráneo - Institut Agroforestal Mediterrani, Estonian Science Foundation, Forestry Commission, Reino Unido, Slovenian Research Agency, European Cooperation in Science and Technology, Ministry for Primary Industries, Nueva Zelanda, Fundação para a Ciência e a Tecnologia, Portugal, Ministry of Agriculture, Forestry and Food, Eslovenia, Instituto Nacional de Investigação Agrária e Veterinária, Portugal, Agence Nationale de Sécurité Sanitaire de l'Alimentation, de l'Environnement et du Travail, Francia, Ioos, R., Aloi, F., Piskur, B., Guinet, C., Mullett, M., Berbegal Martinez, Monica, Bragança, H., Cacciola, S.O., Oskay, F., Cornejo, C., Adamson, K., Kacergius, A., Martínez-Álvarez, P., Nowakowska, J.A., and Luchi, N.
- Abstract
[EN] Fusarium circinatum is a harmful pathogenic fungus mostly attacking Pinus species and also Pseudotsuga menziesii, causing cankers in trees of all ages, damping-off in seedlings, and mortality in cuttings and mother plants for clonal production. This fungus is listed as a quarantine pest in several parts of the world and the trade of potentially contaminated pine material such as cuttings, seedlings or seeds is restricted in order to prevent its spread to disease-free areas. Inspection of plant material often relies on DNA testing and several conventional or real-time PCR based tests targeting F. circinatum are available in the literature. In this work, an international collaborative study joined 23 partners to assess the transferability and the performance of nine molecular protocols, using a wide panel of DNA from 71 representative strains of F. circinatum and related Fusarium species. Diagnostic sensitivity, specificity and accuracy of the nine protocols all reached values >80%, and the diagnostic specificity was the only parameter differing significantly between protocols. The rates of false positives and of false negatives were computed and only the false positive rates differed significantly, ranging from 3.0% to 17.3%. The difference between protocols for some of the performance values were mainly due to cross-reactions with DNA from non-target species, which were either not tested or documented in the original articles. Considering that participating laboratories were free to use their own reagents and equipment, this study demonstrated that the diagnostic protocols for F. circinatum were not easily transferable to end-users. More generally, our results suggest that the use of protocols using conventional or real-time PCR outside their initial development and validation conditions should require careful characterization of the performance data prior to use under modified conditions (i.e. reagents and equipment). Suggestions to improve the transfer are pr
- Published
- 2019
13. Spatial patterns of competing random walkers
- Author
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Ministerio de Economía y Competitividad (España), European Commission, Estonian Science Foundation, Hernández-García, Emilio, Heinsalu, Els, López, Cristóbal, Ministerio de Economía y Competitividad (España), European Commission, Estonian Science Foundation, Hernández-García, Emilio, Heinsalu, Els, and López, Cristóbal
- Abstract
© 2014 Elsevier B.V. We review recent results obtained from simple individual-based models of biological competition in which birth and death rates of an organism depend on the presence of other competing organisms close to it. In addition the individuals perform random walks of different types (Gaussian diffusion and Lévy flights). We focus on how competition and random motions affect each other, from which spatial instabilities and extinctions arise. Under suitable conditions, competitive interactions lead to clustering of individuals and periodic pattern formation. Random motion has a homogenizing effect and then delays this clustering instability. When individuals from species differing in their random walk characteristics are allowed to compete together, the ones with a tendency to form narrower clusters get a competitive advantage over the others. Mean-field deterministic equations are analyzed and compared with the outcome of the individual-based simulations.
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- 2015
14. Constructive effects of diversity in a multi-neuron model of the homeostatic regulation of the sleep-wake cycle
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Ministry of Education and Research (Estonia), European Commission, Ministerio de Economía y Competitividad (España), Estonian Science Foundation, Patriarca, Marco, Hernández-García, Emilio, Toral, Raúl, Ministry of Education and Research (Estonia), European Commission, Ministerio de Economía y Competitividad (España), Estonian Science Foundation, Patriarca, Marco, Hernández-García, Emilio, and Toral, Raúl
- Abstract
As an instance of diversity-induced resonance and of the constructive role of heterogeneity in complex systems, here we study a generalized version of a physiologically-motivated sleep-wake cycle model taking into account the role of orexin [Patriarca et al. (2012) [16]; Postnova et al. (2009) [9]]. With respect to the versions of the model studied previously, here we consider systems containing both a set of orexin neurons - responsible for the production of orexin - and a set of glutaminergic neurons - representing mental activity or sleep depending on their firing or silent state, respectively - within some basic network topologies. The neurons of one or both types are diversified and it is shown how the interplay between the heterogeneous constituent units produces as an emergent effect the recovering or improving of the sleep-wake cycle. At a general level, the results obtained suggest that also systems with a dynamics driven by a homeostatic mechanism, with a time scale much longer than that of the constituent excitable units, may present diversity-induced resonance.
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- 2015
15. Atopy modifies the association between inhaled corticosteroid use and lung function decline in patients with asthma
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Isabelle Pin, Isa Cerveri, Lucia Cazzoletti, Andrei Malinovschi, Josep M. Antó, Simone Accordini, Deborah Jarvis, David Gislason, Ane Johannessen, Bénédicte Leynaert, Pierpaolo Marchetti, Diogenes S. Ferreira, Nicole Probst-Hensch, Alessandro Marcon, Christer Janson, Rain Jögi, Judith Garcia-Aymerich, Angelo Corsico, Joachim Heinrich, Joost Weyler, Vieillissement et Maladies chroniques : approches épidémiologique et de santé publique (VIMA), Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Institut National de la Santé et de la Recherche Médicale (INSERM), Université de Versailles Saint-Quentin-en-Yvelines (UVSQ), 2610, 4350 97/0035-01, 99/0034-01, 99/0034-02 97/0035, 97/0035-02, 99/0034-04, 99/0034-06, 99/0034-07, 99/350 90MR/10, 91AF/6 SEPAR R01 HL62633-01 018996 911631 Russell Sage Foundation, RSF ResMed Foundation AstraZeneca GlaxoSmithKline, GSK Novartis U.S. Public Health Service, USPHS: R01 HL62633-01 Chiesi Farmaceutici, Chiesi Faculty of Arts and Sciences, Harvard University, FAS Boehringer Ingelheim VÃ¥rdalstiftelsen Freiwillige Akademische Gesellschaft, FAG Commercial Aircraft of China, COMAC Wellcome Trust, WT: WT 084703MA Horizon 2020 Framework Programme, H2020: 633212 Growing Spine Foundation, GSF Gobierno del Principado de Asturias Blond McIndoe Research Foundation, BMRF Asthma and Allergy Foundation of America, AAFA Ministerio de Sanidad, Consumo y Bienestar Social, MISAN Union Chimique Belge, UCB Medical Research Council, MRC: 92091, G0901214 National Institute for Health Research, NIHR British Lung Foundation, BLF European Commission, EC: EU-PEAL PL01237 National Health and Medical Research Council, NHMRC: G.0402.00 Asthma Foundation of Victoria Deutsche Forschungsgemeinschaft, DFG: FR1526/1-1, HE 3294/10-1, MA 711/4-1, MA 711/6-1, NO 262/7-1 Agence Nationale de la Recherche, ANR Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung, SNSF: 3100-059302, 3200-042532, 3200-052720, 3247-065896, 3247BO-104283, 3247BO-104284, 3247BO-104288, 33CSCO-108796, 33CSCO-134276/1, 4026-028099, 4026-28099 Eesti Teadusfondi, ETF: 1088 ForskningsrÃ¥det för Arbetsliv och Socialvetenskap, FAS Eesti Teadusagentuur: 562 Bundesamt für Gesundheit, BAG Belgian Federal Science Policy Office, BELSPO Generalitat de Catalunya Consell Català de Recerca i Innovació: 1999SGR 00241 Haridus- ja Teadusministeerium: SF0180060s09 Hjärt-Lungfonden Consiglio Nazionale delle Ricerche, CNR Instituto de Salud Carlos III, ISCIII: C03/011, C03/09 Háskóli Ãslands, HI Norges ForskningsrÃ¥d: 101422/310, 214123 Medicinska ForskningsrÃ¥det, MFR Cancéropôle Ile de France Russian Science Foundation, RSF: 381/05.93 Ministeriet Sundhed Forebyggelse SUVA Sociedad Española de Neumología y Cirugía Torácica, SEPAR: FIS 09/01511, FIS PS09/00716, FIS PS09/02185, FIS PS09/03190, SEPAR 1001/2010 Horizon 2020 Universiteit Antwerpen Comité des Maladies Respiratoires de l'Isère Comissió Interdepartamental de Recerca i Innovació Tecnològica, CIRIT: 1997 SGR 00079, 1999 SGR 00214 Servicio Murciano de Salud Regione del Veneto Regione Piemonte Astma- och Allergiförbundet Centre Hospitalier Universitaire de Bordeaux, CHU de Bordeaux Office Fédéral de l'Education et de la Science, OFES Bundesministerium für Bildung, Wissenschaft, Forschung und Technologie, BMBWF Helmholtz Zentrum München Lungenliga Schweiz Ministerio de Medio Ambiente y Medio Rural y Marino, MARM: G03/176 Ministère des Solidarités et de la Santé INCLIVA Instituto de Investigación Sanitaria: 91/0016-060-05/E, 92/0319, 93/0393, PS09/00716, PS09/01511, PS09/02185, PS09/02457, PS09/03190 Fundació Autònoma Solidària, FAS Servicio Andaluz de Salud, SAS, The ALEC study is funded by the European Union's Horizon 2020 Research and Innovation programme under grant agreement number 633212. ISGlobal is a member of the CERCA Programme, Generalitat de Catalunya. National funders who supported data collection in the original studies are listed in Appendix E4 in this article's Online Repository at www.jaci-inpractice.org. The funders had no role in the writing of the manuscript or the decision to submit it for publication.Conflicts of interest: D. S. Ferreira reports grants from the Asthma Foundation of Victoria, Allen and Hanburys, National Health and Medical Research Council. I. Pin reports travel grants and honoraria from Novartis, Zambon, and AstraZeneca, and nonfinancial support from AGIR?dom. R. J?gi reports grants from Estonian Research Council Personal Research (grant no. 562), and consultancy, lecture, and travel fees from GlaxoSmithKline, Boehringer, and Novartis. The rest of the authors report no financial relationships with any organizations that might have an interest in the submitted work in the previous 3 years, and no other relationships or activities that could appear to have influenced the submitted work.Financial support for ECRHS I: The coordination of this work was supported by the European Commission, and the authors and participants are grateful to the late C. Baya and M. Hallen for their help during the study and K. Vuylsteek and the members of the COMAC for their support. The following grants helped to fund the local studies: Australia: Asthma Foundation of Victoria, Allen and Hanbury's, Belgium: Belgian Science Policy Office, National Fund for Scientific Research, Estonia: Estonian Science Foundation (grant no. 1088), France: Minist?re de la Sant?, Glaxo France, Institut Pneumologique d'Aquitaine, Contrat de Plan Etat-R?gion Languedoc-Rousillon, Caisse nationale de l'assurance maladie des travailleurs salari?s, Comit? national contre les maladies respiratoires et la tuberculose (90MR/10, 91AF/6), Ministre delegu? de la sant?, R?seau national de sant? publique, France, Germany: Helmholtz Zentrum Munich and Bundesminister f?r Forschung und Technologie, Italy: Ministero dell'Universit? e della Ricerca Scientifica e Tecnologica, Consiglio Nazionale delle Ricerche, Regione Veneto (grant RSF no. 381/05.93), Norway: Norwegian Research Council project no. 101422/310, Portugal: Glaxo Farmac?utica Lda, Sandoz Portugesa, Spain: Fondo de Investigaci?n Sanitaria (nos. 91/0016-060-05/E, 92/0319, and 93/0393), Hospital General de Albacete, Hospital General Juan Ram?n Jim?nez, Direcci?n Regional de Salud P?blica (Consejer?a de Sanidad del Principado de Asturias), Consell Interdepartamental de Recerca i Innovaci? Tecnol?gica (1997 SGR 00079), and Servicio Andaluz de Salud, Sweden: The Swedish Medical Research Council, the Swedish Heart-Lung Foundation, the Swedish Association against Asthma and Allergy, Switzerland: Swiss National Science Foundation (grant no. 4026-28099), and UK: National Asthma Campaign, British Lung Foundation, Department of Health, South Thames Regional Health Authority.Financial support for ECRHS II: Australia: National Health and Medical Research Council, Belgium: Antwerp: Fund for Scientific Research (grant code G.0402.00), University of Antwerp, and Flemish Health Ministry, Estonia: Tartu: Estonian Science Foundation (grant no. 4350), France: (All) Programme Hospitalier de Recherche Clinique?Direction de la Recherche Clinique de Grenoble 2000 number 2610, Ministry of Health, Minist?re de l'Emploi et de la Solidarit?, Direction G?nerale de la Sant?, Centre Hospitalier Universitaire de Grenoble, Bordeaux: Institut Pneumologique d'Aquitaine, Grenoble: Comite des Maladies Respiratoires de l'Isere, Montpellier: Aventis (France), Direction Regionale des Affaires Sanitaires et Sociales Languedoc-Roussillon, Paris: Union Chimique Belge-Pharma (France), Aventis (France), Glaxo France, Germany: Erfurt: GSF?National Research Centre for Environment and Health, Deutsche Forschungsgemeinschaft (grant code FR1526/1-1), Hamburg: GSF?National Research Centre for Environment and Health, Deutsche Forschungsgemeinschaft (grant code MA 711/4-1), Iceland: Reykjavik: Icelandic Research Council and Icelandic University Hospital Fund, Italy: Pavia: GlaxoSmithKline Italy, Italian Ministry of University and Scientific and Technological Research (MURST), and Local University Funding for Research 1998 and 1999, Turin: Azienda Sanitaria Locale 4 Regione Piemonte (Italy), Azienda Ospedaliera Centro Traumatologico Ospedaliero/Centro Traumatologico Ortopedico?Istituto Clinico Ortopedico Regina Maria Adelaide Regione Piemonte, Verona: Ministero dell'Universit? e della Ricerca Scientifica (MURST), Glaxo Wellcome s.p.a., Norway: Bergen: Norwegian Research Council, Norwegian Asthma and Allergy Association, Glaxo Wellcome AS, and Norway Research Fund, Spain: Fondo de Investigacion Santarias (grant codes 97/0035-01, 99/0034-01, and 99/0034-02), Hospital Universitario de Albacete, Consejeria de Sanidad, Barcelona: Sociedad Espanola de Neumolog?a y Cirug?a Toracica, Public Health Service (grant code R01 HL62633-01), Fondo de Investigaciones Santarias (grant codes 97/0035-01, 99/0034-01, and 99/0034-02), Consell Interdepartamentalde Recerca i Innovaci? Tecnol?gica (grant code 1999SGR 00241), Instituto de Salud Carlos III, Red de Centros de Epidemiolog?a y Salud P?blica, C03/09, Red de Bases moleculares y fisiol?gicas de las Enfermedades Respiratorias, C03/011 and Red de Grupos Infancia y Medio Ambiente G03/176, Huelva: Fondo de Investigaciones Santarias (grant codes 97/0035-01, 99/0034-01, and 99/0034-02), Galdakao: Basque Health Department, Oviedo: Fondo de Investigaciones Sanitaria (97/0035-02, 97/0035, 99/0034-01, 99/0034-02, 99/0034-04, 99/0034-06, 99/350, and 99/0034-07), European Commission (EU-PEAL PL01237), Generalitat de Catalunya (CIRIT 1999 SGR 00214), Hospital Universitario de Albacete, Sociedad Espa?ola de Neumolog?a y Cirug?a Tor?cica (SEPAR R01 HL62633-01), Red de Centros de Epidemiolog?a y Salud P?blica (C03/09), Red de Bases moleculares y fisiol?gicas de las Enfermedades Respiratorias (C03/011), and Red de Grupos Infancia y Medio Ambiente (G03/176, 97/0035-01, 99/0034-01, and 99/0034-02), Sweden: G?teborg, Umea, AND Uppsala: Swedish Heart Lung Foundation, Swedish Foundation for Health Care Sciences and Allergy Research, Swedish Asthma and Allergy Foundation, Swedish Cancer and Allergy Foundation, and Swedish Council for Working Life and Social Research (FAS), Switzerland: Basel: Swiss National Science Foundation, Swiss Federal Office for Education and Science, and Swiss National Accident Insurance Fund, UK: Ipswich and Norwich: Asthma UK (formerly known as National Asthma Campaign).Financial support for ECRHS III: Australia: National Health and Medical Research Council, Belgium: Antwerp: South and Antwerp City: Research Foundation Flanders (grant code G.0.410.08.N.10), Estonia: Tartu: the Estonian Ministry of Education (SF0180060s09), France: (All): Minist?re de la Sant?, Programme Hospitalier de Recherche Clinique national 2010, Bordeaux: INSERM U897 Universit? Bordeaux segalen, Grenoble: Comite Scientifique AGIRadom 2011, and Paris: Agence Nationale de la Sant?, R?gion Ile de France, domaine d'int?r?t majeur, Germany: Erfurt: German Research Foundation (HE 3294/10-1), Hamburg: German Research Foundation (MA 711/6-1, NO 262/7-1), Iceland: Reykjavik: The Landspitali University Hospital Research Fund, University of Iceland Research Fund, ResMed Foundation, California, USA, Orkuveita Reykjavikur (Geothermal plant), and Vegager?in (The Icelandic Road Administration, Italy: All Italian centers were funded by the Italian Ministry of Health, Chiesi Farmaceutici SpA, in addition, Verona was funded by Cariverona Foundation and Education Ministry (Ministero dell'Istruzione, dell'Universit? e della Ricerca), Norway: Norwegian Research Council (grant no. 214123), Western Norway Regional Health Authorities (grant no. 911631), and Blond McIndoe Research Foundation, Spain: Fondo de Investigaci?n Sanitaria (PS09/02457, PS09/00716, PS09/01511, PS09/02185, PS09/03190), Servicio Andaluz de Salud, Sociedad Espa?ola de Neumolog?a y Cirurg?a Tor?cica (SEPAR 1001/2010), Fondo de Investigaci?n Sanitaria (PS09/02457), Barcelona: Fondo de Investigaci?n Sanitaria (FIS PS09/00716), Galdakao: Fondo de Investigaci?n Sanitaria (FIS 09/01511), Huelva: Fondo de Investigaci?n Sanitaria (FIS PS09/02185) and Servicio Andaluz de Salud, Oviedo: Fondo de Investigaci?n Sanitaria (FIS PS09/03190), Sweden: All centers were funded by The Swedish Heart and Lung Foundation, The Swedish Asthma and Allergy Association, The Swedish Association against Lung and Heart Disease, Swedish Research Council for health, working life and welfare, G?teborg: also received further funding from the Swedish Council for Working Life and Social Research. Umea: also received funding from Vasterbotten Country Council ALF grant, Switzerland: The Swiss National Science Foundation (grants nos. 33CSCO-134276/1, 33CSCO-108796, 3247BO-104283, 3247BO-104288, 3247BO-104284, 3247-065896, 3100-059302, 3200-052720, 3200-042532, and 4026-028099), The Federal Office for Forest, Environment and Landscape, The Federal Office of Public Health, The Federal Office of Roads and Transport, the canton's government of Aargan, Basel-Stadt, Basel-Land, Geneva, Luzern, Ticino, Valais, and Z?rich, the Swiss Lung League, the canton's Lung League of Basel-Stadt/Basel, Landschaft, Geneva, Ticino, Valais, and Zurich, SUVA, Freiwillige Akademische Gesellschaft, UBS Wealth Foundation, Talecris Biotherapeutics GmbH, Abbott Diagnostics, European Commission 018996 (GABRIEL), Wellcome Trust WT 084703MA, and UK: Medical Research Council (grant no.92091), support also provided by the National Institute for Health Research through the Primary Care Research Network., Financial support for ECRHS III: Australia: National Health and Medical Research Council, Estonia: Tartu: the Estonian Ministry of Education ( SF0180060s09 ), France: (All): Ministère de la Santé, Programme Hospitalier de Recherche Clinique national 2010, Bordeaux: INSERM U897 Université Bordeaux segalen, and Paris: Agence Nationale de la Santé, Région Ile de France, domaine d'intérêt majeur, Germany: Erfurt: German Research Foundation ( HE 3294/10-1 ), Hamburg: German Research Foundation ( MA 711/6-1 , NO 262/7-1 ), Iceland: Reykjavik: The Landspitali University Hospital Research Fund, University of Iceland Research Fund, ResMed Foundation , California, USA , Orkuveita Reykjavikur (Geothermal plant), and Vegagerðin (The Icelandic Road Administration, Italy: All Italian centers were funded by the Italian Ministry of Health , Chiesi Farmaceutici SpA, in addition, Verona was funded by Cariverona Foundation and Education Ministry (Ministero dell'Istruzione, dell'Università e della Ricerca), Norway: Norwegian Research Council (grant no. 214123 ), Western Norway Regional Health Authorities (grant no. 911631 ), and Blond McIndoe Research Foundation, Spain: Fondo de Investigación Sanitaria (PS09/02457, PS09/00716, PS09/01511, PS09/02185, PS09/03190), Servicio Andaluz de Salud, Sociedad Española de Neumología y Cirurgía Torácica ( SEPAR 1001/2010), Fondo de Investigación Sanitaria (PS09/02457), Barcelona: Fondo de Investigación Sanitaria (FIS PS09/00716), Galdakao: Fondo de Investigación Sanitaria (FIS 09/01511), Huelva: Fondo de Investigación Sanitaria (FIS PS09/02185) and Servicio Andaluz de Salud, Oviedo: Fondo de Investigación Sanitaria (FIS PS09/03190), Sweden: All centers were funded by The Swedish Heart and Lung Foundation, The Swedish Asthma and Allergy Association , The Swedish Association against Lung and Heart Disease , Swedish Research Council for health, working life and welfare, Göteborg: also received further funding from the Swedish Council for Working Life and Social Research . Umea: also received funding from Vasterbotten Country Council ALF grant, Switzerland: The Swiss National Science Foundation (grants nos. 33CSCO-134276/1 , 33CSCO-108796 , 3247BO-104283 , 3247BO-104288 , 3247BO-104284 , 3247-065896 , 3100-059302 , 3200-052720 , 3200-042532 , and 4026-028099 ), The Federal Office for Forest, Environment and Landscape, The Federal Office of Public Health, The Federal Office of Roads and Transport, the canton's government of Aargan, Basel-Stadt, Basel-Land, Geneva, Luzern, Ticino, Valais, and Zürich, the Swiss Lung League , the canton's Lung League of Basel-Stadt/Basel, Landschaft, Geneva, Ticino, Valais, and Zurich, SUVA, Freiwillige Akademische Gesellschaft , UBS Wealth Foundation, Talecris Biotherapeutics GmbH, Abbott Diagnostics , European Commission 018996 (GABRIEL), Wellcome Trust WT 084703MA, and UK: Medical Research Council (grant no. 92091 ), support also provided by the National Institute for Health Research through the Primary Care Research Network ., Conflicts of interest: D. S. Ferreira reports grants from the Asthma Foundation of Victoria , Allen and Hanburys , National Health and Medical Research Council . I. Pin reports travel grants and honoraria from Novartis , Zambon , and AstraZeneca , and nonfinancial support from AGIRàdom. R. Jõgi reports grants from Estonian Research Council Personal Research (grant no. 562 ), and consultancy, lecture, and travel fees from GlaxoSmithKline, Boehringer, and Novartis. The rest of the authors report no financial relationships with any organizations that might have an interest in the submitted work in the previous 3 years, and no other relationships or activities that could appear to have influenced the submitted work., Financial support for ECRHS II: Australia: National Health and Medical Research Council, Belgium: Antwerp: Fund for Scientific Research (grant code G.0402.00 ), University of Antwerp , and Flemish Health Ministry, Estonia: Tartu: Estonian Science Foundation (grant no. 4350 ), France: (All) Programme Hospitalier de Recherche Clinique—Direction de la Recherche Clinique de Grenoble 2000 number 2610, Ministry of Health , Ministère de l’Emploi et de la Solidarité, Direction Génerale de la Santé, Centre Hospitalier Universitaire de Grenoble, Bordeaux: Institut Pneumologique d’Aquitaine, Grenoble: Comite des Maladies Respiratoires de l’Isere, Germany: Erfurt: GSF— National Research Centre for Environment and Health , Deutsche Forschungsgemeinschaft (grant code FR1526/1-1 ), Hamburg: GSF— National Research Centre for Environment and Health , Deutsche Forschungsgemeinschaft (grant code MA 711/4-1 ), Turin: Azienda Sanitaria Locale 4 Regione Piemonte (Italy), Azienda Ospedaliera Centro Traumatologico Ospedaliero/Centro Traumatologico Ortopedico—Istituto Clinico Ortopedico Regina Maria Adelaide Regione Piemonte, Verona: Ministero dell’Università e della Ricerca Scientifica (MURST), Glaxo Wellcome s.p.a., Norway: Bergen: Norwegian Research Council , Norwegian Asthma and Allergy Association , Glaxo Wellcome AS , and Norway Research Fund, Spain: Fondo de Investigacion Santarias (grant codes 97/0035-01 , 99/0034-01 , and 99/0034-02 ), Hospital Universitario de Albacete, Consejeria de Sanidad, Barcelona: Sociedad Espanola de Neumología y Cirugía Toracica, Public Health Service (grant code R01 HL62633-01 ), Fondo de Investigaciones Santarias (grant codes 97/0035-01 , 99/0034-01 , and 99/0034-02 ), Consell Interdepartamentalde Recerca i Innovació Tecnológica (grant code 1999SGR 00241 ), Instituto de Salud Carlos III, Red de Centros de Epidemiología y Salud Pública, C03/09, Red de Bases moleculares y fisiológicas de las Enfermedades Respiratorias, C03/011 and Red de Grupos Infancia y Medio Ambiente G03/176, Huelva: Fondo de Investigaciones Santarias (grant codes 97/0035-01 , 99/0034-01 , and 99/0034-02 ), Oviedo: Fondo de Investigaciones Sanitaria ( 97/0035-02 , 97/0035 , 99/0034-01 , 99/0034-02 , 99/0034-04 , 99/0034-06 , 99/350 , and 99/0034-07 ), European Commission ( EU-PEAL PL01237 ), Generalitat de Catalunya ( CIRIT 1999 SGR 00214), Hospital Universitario de Albacete, Sociedad Española de Neumología y Cirugía Torácica ( SEPAR R01 HL62633-01 ), Red de Centros de Epidemiología y Salud Pública (C03/09), Red de Bases moleculares y fisiológicas de las Enfermedades Respiratorias (C03/011), and Red de Grupos Infancia y Medio Ambiente (G03/176, Sweden: Göteborg, Umea, AND Uppsala: Swedish Heart Lung Foundation, Swedish Foundation for Health Care Sciences and Allergy Research , Swedish Asthma and Allergy Foundation , Swedish Cancer and Allergy Foundation , and Swedish Council for Working Life and Social Research ( FAS ), Switzerland: Basel: Swiss National Science Foundation , Swiss Federal Office for Education and Science , and Swiss National Accident Insurance Fund, UK: Ipswich and Norwich: Asthma UK (formerly known as National Asthma Campaign)., Financial support for ECRHS I: The coordination of this work was supported by the European Commission , and the authors and participants are grateful to the late C. Baya and M. Hallen for their help during the study and K. Vuylsteek and the members of the COMAC for their support. The following grants helped to fund the local studies: Australia: Asthma Foundation of Victoria , Allen and Hanbury's, Belgium: Belgian Science Policy Office , National Fund for Scientific Research, Estonia: Estonian Science Foundation (grant no. 1088 ), France: Ministère de la Santé, Glaxo France , Institut Pneumologique d'Aquitaine , Contrat de Plan Etat-Région Languedoc-Rousillon , Caisse nationale de l'assurance maladie des travailleurs salariés, Comité national contre les maladies respiratoires et la tuberculose (90MR/10, 91AF/6), Ministre delegué de la santé, Réseau national de santé publique, France, Germany: Helmholtz Zentrum Munich and Bundesminister für Forschung und Technologie, Italy: Ministero dell'Università e della Ricerca Scientifica e Tecnologica, Consiglio Nazionale delle Ricerche, Regione Veneto (grant RSF no. 381/05.93 ), Portugal: Glaxo Farmacêutica Lda, Sandoz Portugesa, Spain: Fondo de Investigación Sanitaria (nos. 91/0016-060-05/E , 92/0319 , and 93/0393 ), Hospital General de Albacete, Hospital General Juan Ramón Jiménez, Dirección Regional de Salud Pública (Consejería de Sanidad del Principado de Asturias), Consell Interdepartamental de Recerca i Innovació Tecnològica (1997 SGR 00079), and Servicio Andaluz de Salud, Sweden: The Swedish Medical Research Council , the Swedish Heart-Lung Foundation , the Swedish Association against Asthma and Allergy, Switzerland: Swiss National Science Foundation (grant no. 4026-28099 ), and UK: National Asthma Campaign , British Lung Foundation , Department of Health , South Thames Regional Health Authority ., The ALEC study is funded by the European Union’s Horizon 2020 Research and Innovation programme under grant agreement number 633212. ISGlobal is a member of the CERCA Programme, Generalitat de Catalunya. National funders who supported data collection in the original studies are listed in Appendix E4 in this article's Online Repository at www.jaci-inpractice.org . The funders had no role in the writing of the manuscript or the decision to submit it for publication., Commission of the European Communities, Medical Research Council (MRC), and Ageing Lungs European Cohorts ALEC
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Allergy ,Epidemiology ,Respiratory Medicine and Allergy ,Cohort Studies ,Atopy ,Allergic sensitization ,0302 clinical medicine ,Adrenal Cortex Hormones ,Immunology and Allergy ,Medicine ,030212 general & internal medicine ,[SDV.IMM.ALL]Life Sciences [q-bio]/Immunology/Allergology ,Lung ,Sensitization ,Lungmedicin och allergi ,biology ,Inhaled corticosteroids ,Lung function decline ,Pyroglyphidae ,Precision medicine ,3. Good health ,PROPENSITY SCORE ,medicine.anatomical_structure ,IgE ,Cohort study ,Life Sciences & Biomedicine ,Response to corticosteroids ,Asthma ,Adult ,medicine.medical_specialty ,Immunology ,Allergic inflammation ,03 medical and health sciences ,FEV1/FVC ratio ,Internal medicine ,Administration, Inhalation ,Animals ,Humans ,House dust mite ,Science & Technology ,business.industry ,Ageing Lungs in European Cohorts (ALEC) study ,medicine.disease ,biology.organism_classification ,030228 respiratory system ,Cats ,Human medicine ,business - Abstract
BACKGROUND: Inhaled corticosteroids (ICSs) are the mainstay of asthma treatment, but response to medication is variable. Patients with allergic inflammation generally show a better short-term response to ICSs; however, studies on predictors of long-term response are few. OBJECTIVE: To assess whether allergic sensitization can modify the association between ICS use and lung function decline over 20 years in adult asthma. METHODS: We used data from the 3 clinical examinations of the European Community Respiratory Health Survey. We measured ICS use (no use, and use for 8 years) and FEV1 decline among subjects with asthma over the 2 periods between consecutive examinations. We conducted a cohort study combining data of the 2 periods (906 observations from 745 subjects) to assess whether the association between ICS use and FEV1 decline was modified by allergic sensitization (IgE > 0.35 kU/L for any of house-dust mite, timothy grass, cat, or Cladosporium). RESULTS: FEV1 decline was similar for non-ICS users, as well as ICS users for less than 1.3 years, with and without allergic sensitization. However, among subjects on ICSs for a longer period, sensitization was associated with an attenuated decline (P-interaction = .006): in the group treated for more than 8 years, FEV1 decline was on average 27 mL/y (95% CIBonferroni-adjusted, 11-42) lower for subjects with sensitization compared with nonsensitized subjects. CONCLUSIONS: Our study suggests that biomarkers of atopy can predict a more favorable long-term response to ICSs. Randomized controlled studies are needed to confirm these findings. (C) 2019 The Authors. Published by Elsevier Inc. on behalf of the American Academy of Allergy, Asthma & Immunology.
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- 2020
16. Proton transfer reactions of hydrazine-boranes
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Adamson, Aiko, Guillemin, Jean-Claude, Burk, Peeter, University of Tartu, Institut des Sciences Chimiques de Rennes (ISCR), Centre National de la Recherche Scientifique (CNRS)-Institut de Chimie du CNRS (INC)-Université de Rennes 1 (UR1), Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Ecole Nationale Supérieure de Chimie de Rennes (ENSCR)-Institut National des Sciences Appliquées - Rennes (INSA Rennes), Institut National des Sciences Appliquées (INSA)-Université de Rennes (UNIV-RENNES)-Institut National des Sciences Appliquées (INSA), This work was supported by institutional research funding IUT (IUT20-15) of the Estonian Ministry of Education and Research. We acknowledge the Estonian Science Foundation (Grant No. 8809) and the Estonian Ministry of Education and Research Targeted Financing Project No. SF0180120s08. This work is a part of an Integrated Exchange Program ‘PARROT’ co-financed by the Estonian Science Foundation and the French Ministry of Foreign Affairs. In addition, the work has been partially supported by graduate school 'Functional materials and technologies' receiving funding from the European Social Fund under project 1.2.0401.09-0079 in Estonia., Université de Rennes (UR)-Institut National des Sciences Appliquées - Rennes (INSA Rennes), and Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Ecole Nationale Supérieure de Chimie de Rennes (ENSCR)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)
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gas-phase ,ab initio calculations ,dihydrogen ,[CHIM]Chemical Sciences ,hydrazine ,acidity ,basicity ,complex ,borane - Abstract
International audience; Hydrazine-borane and hydrazine-diborane contain respectively 15.4 and 16.9 wt% of hydrogen and are potential materials for hydrogen storage. In this work we present the gas-phase complexation energies, acidities and basicities of hydrazine-borane and hydrazine-bisborane calculated at MP2/6-311+G(d,p) level. We also report the release of dihydrogen from both protonated complexes (Ghydrazine-borane = –20.9 kcal/mol and Ghydrazine-bisborane = –27.2 kcal/mol) which is much more exergonic than from analogues amine-boranes. The addition of the first BH3 to the hydrazine releases 17.1 kcal/mol and the second addition releases 15.8 kcal/mol. The attachment of BH3 also increases the N-H acidity of hydrazine by 46.3 kcal/mol. It was found that the B-H deprotonation leads to intramolecular rearrangement. The basicity values for hydrazine-borane and –bisborane are 180 and 172.8 kcal/mol respectively. For both complexes the protonation centres are located at the boron moiety. The protonated structure of hydrazine-bisborane is cyclic and can be described as H2 captured between a negatively charged B-H hydrogen and positive boron (B-H••H2••B). Atoms in Molecules analysis is used to investigate bond paths in concerning structures.
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- 2015
17. Global patterns in endemicity and vulnerability of soil fungi
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Leho Tedersoo, Vladimir Mikryukov, Alexander Zizka, Mohammad Bahram, Niloufar Hagh‐Doust, Sten Anslan, Oleh Prylutskyi, Manuel Delgado‐Baquerizo, Fernando T. Maestre, Jaan Pärn, Maarja Öpik, Mari Moora, Martin Zobel, Mikk Espenberg, Ülo Mander, Abdul Nasir Khalid, Adriana Corrales, Ahto Agan, Aída‐M. Vasco‐Palacios, Alessandro Saitta, Andrea C. Rinaldi, Annemieke Verbeken, Bobby P. Sulistyo, Boris Tamgnoue, Brendan Furneaux, Camila Duarte Ritter, Casper Nyamukondiwa, Cathy Sharp, César Marín, Daniyal Gohar, Darta Klavina, Dipon Sharmah, Dong Qin Dai, Eduardo Nouhra, Elisabeth Machteld Biersma, Elisabeth Rähn, Erin K. Cameron, Eske De Crop, Eveli Otsing, Evgeny A. Davydov, Felipe E. Albornoz, Francis Q. Brearley, Franz Buegger, Geoffrey Zahn, Gregory Bonito, Inga Hiiesalu, Isabel C. Barrio, Jacob Heilmann‐Clausen, Jelena Ankuda, John Y. Kupagme, Jose G. Maciá‐Vicente, Joseph Djeugap Fovo, József Geml, Juha M. Alatalo, Julieta Alvarez‐Manjarrez, Kadri Põldmaa, Kadri Runnel, Kalev Adamson, Kari Anne Bråthen, Karin Pritsch, Kassim I. Tchan, Kęstutis Armolaitis, Kevin D. Hyde, Kevin K. Newsham, Kristel Panksep, Adebola A. Lateef, Liis Tiirmann, Linda Hansson, Louis J. Lamit, Malka Saba, Maria Tuomi, Marieka Gryzenhout, Marijn Bauters, Meike Piepenbring, Nalin Wijayawardene, Nourou S. Yorou, Olavi Kurina, Peter E. Mortimer, Peter Meidl, Petr Kohout, Rolf Henrik Nilsson, Rasmus Puusepp, Rein Drenkhan, Roberto Garibay‐Orijel, Roberto Godoy, Saad Alkahtani, Saleh Rahimlou, Sergey V. Dudov, Sergei Põlme, Soumya Ghosh, Sunil Mundra, Talaat Ahmed, Tarquin Netherway, Terry W. Henkel, Tomas Roslin, Vincent Nteziryayo, Vladimir E. Fedosov, Vladimir G. Onipchenko, W. A. Erandi Yasanthika, Young Woon Lim, Nadejda A. Soudzilovskaia, Alexandre Antonelli, Urmas Kõljalg, Kessy Abarenkov, Universidad de Alicante. Departamento de Ecología, Universidad de Alicante. Instituto Multidisciplinar para el Estudio del Medio 'Ramón Margalef', Laboratorio de Ecología de Zonas Áridas y Cambio Global (DRYLAB), Estonian Science Foundation, Novo Nordisk Foundation, Tedersoo, Leho, Zizka, Alexander, Hagh-Doust, Niloufar, Anslan, Sten, Prylutskyi. Oleh, Delgado-Baquerizo, Manuel, Maestre, Fernando T., Moora, Mari, Zobel, Martin, Espenberg, Mikk, Mander, Ülo, Khalid, Abdul Nasir, Corrales, Adriana, Agan, Ahto, Vasco-Palacios, Aída-M., Saitta, A., Sulistyo, Bobby P., Furneaux, Brendan, Duarte Ritter, Camila, Nyamukondiwa, Casper, Marín, César, Gohar, Daniyal, Klavina, Darta, Dai, Dong Qin, Machteld Biersma, Elisabeth, Otsing. Eveli, Davydov, Evgeniy A., Albornoz, Felipe E., Buegger, Franz, Zahn, Geoffrey, Bonito, Gregory, Hiiesalu, Inga, Barrio, Isabel C., Heilmann-Clausen, Jacob, Kupagme, John Y., Maciá-Vicente, Jose G., Geml, József, Alatalo, Juha M., Álvarez-Manjarrez, Julieta, Põldmaa, Kadri, Runnel, Kadrid, Bråthen, Kari Anne, Pritsch, Karin, Armolaitis, Kęstutis, Panksep, Kristel, Lateef, Adebola A., Saba, M., Tuomi, Maria W., Gryzenhout, M., Bauters, Marijn, Wijayawardene, Nalin N., Yorou, Nourou S., Kurina, Olavi, Kohout, Petr, Nilsson, R. H., Garibay-Orijel, Roberto, Rahimlou, Saleh, Ghosh, Soumya, Mundra, Sunil, Netherway, Tarquin, Henkel, Terry W., Roslin, Tomas, Fedosov, V., Lim, Young Woon, Antonelli, Alexandre, Koljalg, Urmas, Abarenkov, K., Soudzilovskaia, Nadejda A., Alvarez-Manjarrez, Julieta/0000-0002-5581-7443, Espenberg, Mikk/0000-0003-0469-6394, Marin, Cesar/0000-0002-2529-8929, Mikryukov, Vladimir, Bahram, Mohammad, Prylutskyi, Oleh, Parn, Jaan, Opik, Maarja, Mander, Ulo, Vasco-Palacios, Aida-M, Saitta, Alessandro, Rinaldi, Andrea C., Verbeken, Annemieke, Tamgnoue, Boris, Ritter, Camila Duarte, Sharp, Cathy, Marin, Cesar, Sharmah, Dipon, Nouhra, Eduardo, Biersma, Elisabeth Machteld, Rahn, Elisabeth, Cameron, Erin K., De Crop, Eske, Otsing, Eveli, Davydov, Evgeny A., Brearley, Francis Q., Ankuda, Jelena, Macia-Vicente, Jose G., Fovo, Joseph Djeugap, Geml, Jozsef, Alvarez-Manjarrez, Julieta, Poldmaa, Kadri, Runnel, Kadri, Adamson, Kalev, Brathen, Kari Anne, Tchan, Kassim, I, Hyde, Kevin D., Newsham, Kevin K., Tiirmann, Liis, Hansson, Linda, Lamit, Louis J., Saba, Malka, Tuomi, Maria, Gryzenhout, Marieka, Piepenbring, Meike, Wijayawardene, Nalin, Mortimer, Peter E., Meidl, Peter, Nilsson, Rolf Henrik, Puusepp, Rasmus, Drenkhan, Rein, Godoy, Roberto, Alkahtani, Saad, Dudov, Sergey, V, Polme, Sergei, Ahmed , Talaat, Nteziryayo, Vincent, Fedosov, Vladimir E., Onipchenko, Vladimir G., Yasanthika, W. A. Erandi, SOUDZILOVSKAIA, Nadia, Abarenkov, Kessy, Tedersoo, Leho [0000-0002-1635-1249], Zizka, Alexander [0000-0002-1680-9192, Hagh-Doust, Niloufar [0000-0003-0616-5829], Anslan, Sten [0000-0002-2299-454X], Prylutskyi. Oleh [0000-0001-5730-517X], Delgado-Baquerizo, Manuel [0000-0002-6499-576X], Maestre, Fernando T. [0000-0002-7434-4856], Moora, Mari [0000-0002-4819-7506], Zobel, Martin [0000-0001-7957-6704], Espenberg, Mikk [0000-0003-0469-6394], Mander, Ülo [Mander, Ülo], Khalid, Abdul Nasir [0000-0002-5635-8031], Corrales, Adriana [0000-0001-9885-4634], Agan, Ahto [0000-0001-9010-8944], Vasco-Palacios, Aída-M. [0000-0003-0539-9711], Saitta, A. [0000-0002-5670-7780], Sulistyo, Bobby P. [0000-0002-5203-4822], Furneaux, Brendan [0000-0003-3522-7363], Duarte Ritter, Camila [0000-0002-3371-7425], Nyamukondiwa, Casper [0000-0002-0395-4980], Marín, César [0000-0002-2529-8929], Gohar, Daniyal [0000-0003-0312-1142], Klavina, Darta [0000-0002-1455-9062], Dai, Dong Qin [0000-0001-8935-8807], Machteld Biersma, Elisabeth [0000-0002-9877-2177], Otsing. Eveli [0000-0001-7416-257X], Davydov, Evgeniy A. [0000-0002-2316-8506], Albornoz, Felipe E. [0000-0001-9526-0945], Buegger, Franz [0000-0003-3526-4711], Zahn, Geoffrey []0000-0002-8691-692X, Bonito, Gregory [0000-0002-7262-8978], Hiiesalu, Inga [0000-0002-5457-2376], Barrio, Isabel C. [0000-0002-8120-5248], Heilmann-Clausen, Jacob [0000-0003-4713-6004], Kupagme, John Y. [0000-0002-9981-050X], Maciá-Vicente, Jose G. [0000-0002-7174-7270], Geml, József [0000-0001-8745-0423], Alatalo, Juha M. [0000-0001-5084-850X], Álvarez-Manjarrez, Julieta [0000-0002-5581-7443], Põldmaa, Kadri [0000-0002-7936-2455], Runnel, Kadrid [0000-0002-7308-3623], Bråthen, Kari Anne [0000-0003-0942-1074], Pritsch, Karin [0000-0001-6384-2473], Armolaitis, Kęstutis [0000-0001-8295-2440], Panksep, Kristel [0000-0003-4743-6111], Lateef, Adebola A. [0000-0002-0510-7996], Saba, M. [0000-0001-7673-2345], Tuomi, Maria W. [0000-0002-7154-5177], Gryzenhout, M. [0000-0002-9224-4277], Bauters, Marijn [0000-0003-0978-6639], Wijayawardene, Nalin N. [0000-0003-0522-5498], Yorou, Nourou S. [0000-0001-6997-811X], Kurina, Olavi [0000-0002-4858-4629], Kohout, Petr [0000-0002-3985-2310], Nilsson, R. H. [0000-0002-8052-0107], Garibay-Orijel, Roberto [0000-0002-6977-7550], Rahimlou, Saleh [0000-0003-0427-1329], Ghosh, Soumya [0000-0002-4945-3516], Mundra, Sunil [0000-0002-0535-118X], Netherway, Tarquin [0000-0002-9049-9225], Henkel, Terry W. [0000-0001-9760-8837], Roslin, Tomas [0000-0002-2957-4791], Fedosov, V. [0000-0002-5331-6346], Lim, Young Woon [0000-0003-2864-3449], Antonelli, Alexandre [0000-0003-1842-9297], Koljalg, Urmas [0000-0002-5171-1668], and Abarenkov, K. [0000-0001-5526-4845
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DIVERSITY ,Plant Ecology and Nature Conservation ,Forests ,conservation priorities ,Soil ,Mycorrhizae ,Biodiversity ,Biogeography ,Climate Change ,Conservation Priorities ,Global Change Vulnerability ,Global Maps ,Mycorrhizal Fungi ,Pathogens ,Saprotrophs ,global change vulnerability ,global maps ,mycorrhizal fungi ,pathogens ,Animals ,Humans ,Environmental Chemistry ,MICROBIAL COMMUNITIES ,ADAPTATION ,saprotrophs ,TEMPERATURE ,Ecosystem ,Soil Microbiology ,biogeography ,General Environmental Science ,biodiversity ,Ekologi ,Global and Planetary Change ,Ecology ,ECTOMYCORRHIZAL FUNGI ,SPECIES RICHNESS ,Fungi ,Biology and Life Sciences ,CLIMATE-CHANGE MITIGATION ,Plants ,Environmental Sciences related to Agriculture and Land-use ,climate change ,Earth and Environmental Sciences ,BACTERIA ,Plantenecologie en Natuurbeheer ,COMMUNITIES - Abstract
15 páginas.- 6 figuras.- 93 referencias, Fungi are highly diverse organisms, which provide multiple ecosystem services. However, compared with charismatic animals and plants, the distribution patterns and conservation needs of fungi have been little explored. Here, we examined endemicity patterns, global change vulnerability and conservation priority areas for functional groups of soil fungi based on six global surveys using a high-resolution, long-read metabarcoding approach. We found that the endemicity of all fungi and most functional groups peaks in tropical habitats, including Amazonia, Yucatan, West-Central Africa, Sri Lanka, and New Caledonia, with a negligible island effect compared with plants and animals. We also found that fungi are predominantly vulnerable to drought, heat and land-cover change, particularly in dry tropical regions with high human population density. Fungal conservation areas of highest priority include herbaceous wetlands, tropical forests, and woodlands. We stress that more attention should be focused on the conservation of fungi, especially root symbiotic arbuscular mycorrhizal and ectomycorrhizal fungi in tropical regions as well as unicellular early-diverging groups and macrofungi in general. Given the low overlap between the endemicity of fungi and macroorganisms, but high conservation needs in both groups, detailed analyses on distribution and conservation requirements are warranted for other microorganisms and soil organisms., The bulk of the funding is derived from the Estonian Science Foundation (grants PRG632, PRG1170, PRG1615, MOBTP198), EEA Financial Mechanism Baltic Research Programme (EMP442), and Novo Nordisk Fonden (NNF20OC0059948).
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- 2022
18. Global homogenization of the structure and function in the soil microbiome of urban greenspaces
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Pankaj Trivedi, Javier Gutiérrez Illán, Sebastián Abades, Alberto L. Teixido, Thulani P. Makhalanyane, Hang-Wei Hu, Miguel Berdugo, Felipe Bastida, Blessing Sokoya, Xiaobing Zhou, Eli Zaady, Ana Maria Rey, Jun-Tao Wang, Brajesh K. Singh, Christina Siebe, Fernando D. Alfaro, José L. Moreno, Alexandra Rodríguez, Tine Grebenc, Jorge Durán, Manuel Delgado-Baquerizo, Tina Unuk Nahberger, Concha Cano-Díaz, Jianyong Wang, José Luis Blanco-Pastor, Jay Prakash Verma, Leho Tedersoo, Noah Fierer, Xin-Quan Zhou, David J. Eldridge, Ji-Zheng He, Adebola R. Bamigboye, César Plaza, Yu-Rong Liu, Gabriel Felipe Peñaloza-Bojacá, Ling Wang, Universidad Pablo de Olavide [Sevilla] (UPO), University of New South Wales [Sydney] (UNSW), Huazhong Agricultural University, University of Colorado [Boulder], Western Sydney University, University of Melbourne, Fujian Normal University [Fujian], Consejo Superior de Investigaciones Científicas [Madrid] (CSIC), Obafemi Awolowo University (OAU), Unité de Recherche Pluridisciplinaire Prairies et Plantes Fourragères (P3F), Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Universidad Rey Juan Carlos [Madrid] (URJC), Washington State University (WSU), University of Pretoria [South Africa], Universidad Autónoma de la Ciudad de México (UACM), Colorado State University [Fort Collins] (CSU), Gilat Research Center, Banaras Hindu University [Varanasi] (BHU), Northeast Normal University, Slovenian Forestry Institute, Universidade Federal de Minas Gerais [Belo Horizonte] (UFMG), Universidade Federal de Mato Grosso (UFMT), Eidgenössische Technische Hochschule - Swiss Federal Institute of Technology [Zürich] (ETH Zürich), Universidade de Coimbra [Coimbra], Xinjiang Institute of Ecology and Geography [Urumqi] (XIEG), Chinese Academy of Sciences [Beijing] (CAS), Universidad Mayor [Santiago de Chile], University of Tartu, Fundación BBVA, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), National Science Foundation (US), Estonian Science Foundation, Alexander von Humboldt Foundation, Australian Research Council, Fondo Nacional de Desarrollo Científico y Tecnológico (Chile), European Commission, Consejo Superior de Investigaciones Científicas (España), Fundación Séneca, National Research Foundation (South Africa), Slovenian Research Agency, Fundação para a Ciência e a Tecnologia (Portugal), Ministério da Ciência, Tecnologia e Ensino Superior (Portugal), and Science and Engineering Research Board (India)
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0301 basic medicine ,[SDV.SA]Life Sciences [q-bio]/Agricultural sciences ,Nutrient cycle ,funkcionalna pestrost ,Environmental Studies ,030106 microbiology ,Biodiversity ,soil biodiversity ,biodiverziteta tal ,03 medical and health sciences ,11. Sustainability ,urban soils ,Ecosystem ,Microbiome ,Research Articles ,Multidisciplinary ,Ecology ,SciAdv r-articles ,15. Life on land ,functional diversity ,urbana tla ,030104 developmental biology ,Geography ,structural diversity ,13. Climate action ,strukturna pestrost ,Greenhouse gas ,Soil water ,Species richness ,Urban ecosystem ,udc:630*114 ,Research Article - Abstract
The structure and function of the soil microbiome of urban greenspaces remain largely undetermined. We conducted a global field survey in urban greenspaces and neighboring natural ecosystems across 56 cities from six continents, and found that urban soils are important hotspots for soil bacterial, protist and functional gene diversity, but support highly homogenized microbial communities worldwide. Urban greenspaces had a greater proportion of fast-growing bacteria, algae, amoebae, and fungal pathogens, but a lower proportion of ectomycorrhizal fungi than natural ecosystems. These urban ecosystems also showed higher proportions of genes associated with human pathogens, greenhouse gas emissions, faster nutrient cycling, and more intense abiotic stress than natural environments. City affluence, management practices, and climate were fundamental drivers of urban soil communities. Our work paves the way toward a more comprehensive global-scale perspective on urban greenspaces, which is integral to managing the health of these ecosystems and the well-being of human populations., M.D.-B. and this project were supported by a 2019 Leonardo Grant for Researchers and Cultural Creators, BBVA Foundation (URBANFUN) and by the BES grant agreement no. LRB17\1019 (MUSGONET). M.D.-B. is also supported by a Ramón y Cajal grant from the Spanish Ministry of Science and Innovation (RYC2018-025483-I). N.F. was supported by grants from the U.S. National Science Foundation (DEB1556090 and DEB1542653). L.T. acknowledges support from Norway-Baltic collaboration grant EMP442 and Estonian Science Foundation grant PRG632. B.K.S. acknowledges a research award by the Humboldt Foundation and funding from the Australian Research Council (DP190103714). F.A. is supported by ANID FONDECYT 11180538 and 1170995. S.A. is funded by ANID FONDECYT 1170995 and ANID ANILLO ACT192027. F.B. and J.L.M. acknowledge support from the Spanish Ministry and FEDER funds for the project AGL2017-85755-R, the i-LINK+ 2018 (LINKA20069) from CSIC, as well as funds from “Fundación Séneca” from Murcia Province (19896/GERM/15). C.P. acknowledges support from the Spanish State Plan for Scientific and Technical Research and Innovation (2013–2016), award reference AGL2016-75762-R (AEI/FEDER, UE). M.B. acknowledges support from a Juan de la Cierva Formación grant from the Spanish Ministry of Economy and Competitiveness (FJCI-2018-036520-I). T.P.M. would like to acknowledge contributions from the National Research Foundation of South Africa and cities involved in the South African survey. Slovenian coauthors were supported by the research project J4-1766 “Methodology approaches in genome-based diversity and ecological plasticity study of truffles from their natural distribution areas” and the Research Program in Forest Biology, Ecology, and Technology (P4-0107) of the Slovenian Research Agency. J.D. and A. Rey acknowledge support from the FCT (IF/00950/2014 and SFRH/BDP/108913/2015, respectively), as well as from the MCTES, FSE, UE, and the CFE (UIDB/04004/2020) research unit financed by FCT/MCTES through national funds (PIDDAC). J.P.V. acknowledges financial support from SERB (Science and Engineering Research Board) (EEQ/2017/000775) India. J.-Z.H. and H.-W.H. are financially supported by Australian Research Council (DP170101628).
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- 2021
19. Global data on earthworm abundance, biomass, diversity and corresponding environmental properties
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Phillips, Helen R. P., Bach, Elizabeth M., Bartz, Marie L. C., Bennett, Joanne M., Beugnon, Rémy, Briones, Maria J. I., Brown, George G., Ferlian, Olga, Gongalsky, Konstantin B., Guerra, Carlos A., König-Ries, Birgitta, Krebs, Julia J., Orgiazzi, Alberto, Ramirez, Kelly S., Russell, David J., Schwarz, Benjamin, Wall, Diana H., Brose, Ulrich, Decaëns, Thibaud, Lavelle, Patrick, Loreau, Michel, Mathieu, Jérôme, Mulder, Christian, van der Putten, Wim H., Rillig, Matthias C., Thakur, Madhav P., de Vries, Franciska T., Wardle, David A., Ammer, Christian, Ammer, Sabine, Arai, Miwa, Ayuke, Fredrick O., Baker, Geoff H., Baretta, Dilmar, Barkusky, Dietmar, Beauséjour, Robin, Bedano, Jose C., Birkhofer, Klaus, Blanchart, Eric, Blossey, Bernd, Bolger, Thomas, Bradley, Robert L., Brossard, Michel, Burtis, James C., Capowiez, Yvan, Cavagnaro, Timothy R., Choi, Amy, Clause, Julia, Cluzeau, Daniel, Coors, Anja, Crotty, Felicity V., Crumsey, Jasmine M., Dávalos, Andrea, Cosín, Darío J. Díaz, Dobson, Annise M., Domínguez, Anahí, Duhour, Andrés Esteban, van Eekeren, Nick, Emmerling, Christoph, Falco, Liliana B., Fernández, Rosa, Fonte, Steven J., Fragoso, Carlos, Franco, André L. C., Fusilero, Abegail, Geraskina, Anna P., Gholami, Shaieste, González, Grizelle, Gundale, Michael J., López, Mónica Gutiérrez, Hackenberger, Branimir K., Hackenberger, Davorka K., Hernández, Luis M., Hirth, Jeff R., Hishi, Takuo, Holdsworth, Andrew R., Holmstrup, Martin, Hopfensperger, Kristine N., Lwanga, Esperanza Huerta, Huhta, Veikko, Hurisso, Tunsisa T., Iannone III, Basil V., Iordache, Madalina, Irmler, Ulrich, Ivask, Mari, Jesús, Juan B., Johnson-Maynard, Jodi L., Joschko, Monika, Kaneko, Nobuhiro, Kanianska, Radoslava, Keith, Aidan M., Kernecker, Maria L., Koné, Armand W., Kooch, Yahya, Kukkonen, Sanna T., Lalthanzara, H., Lammel, Daniel R., Lebedev, Iurii M., Le Cadre, Edith, Lincoln, Noa K., López-Hernández, Danilo, Loss, Scott R., Marichal, Raphael, Matula, Radim, Minamiya, Yukio, Moos, Jan Hendrik, Moreno, Gerardo, Morón-Ríos, Alejandro, Motohiro, Hasegawa, Muys, Bart, Neirynck, Johan, Norgrove, Lindsey, Novo, Marta, Nuutinen, Visa, Nuzzo, Victoria, Mujeeb Rahman, P., Pansu, Johan, Paudel, Shishir, Pérès, Guénola, Pérez-Camacho, Lorenzo, Ponge, Jean-François, Prietzel, Jörg, Rapoport, Irina B., Rashid, Muhammad Imtiaz, Rebollo, Salvador, Rodríguez, Miguel Á., Roth, Alexander M., Rousseau, Guillaume X., Rozen, Anna, Sayad, Ehsan, van Schaik, Loes, Scharenbroch, Bryant, Schirrmann, Michael, Schmidt, Olaf, Schröder, Boris, Seeber, Julia, Shashkov, Maxim P., Singh, Jaswinder, Smith, Sandy M., Steinwandter, Michael, Szlavecz, Katalin, Talavera, José Antonio, Trigo, Dolores, Tsukamoto, Jiro, Uribe-López, Sheila, de Valença, Anne W., Virto, Iñigo, Wackett, Adrian A., Warren, Matthew W., Webster, Emily R., Wehr, Nathaniel H., Whalen, Joann K., Wironen, Michael B., Wolters, Volkmar, Wu, Pengfei, Zenkova, Irina V., Zhang, Weixin, Cameron, Erin K., Eisenhauer, Nico, German Centre for Integrative Biodiversity Research (iDiv), Leipzig University, Saint Mary's University [Halifax], Colorado State University [Fort Collins] (CSU), University of Coimbra [Portugal] (UC), Martin-Luther-University Halle-Wittenberg, University of Canberra, Universidade de Vigo, Embrapa Forestry, Brazilian Agricultural Research Corporation (Embrapa), A.N. Severtsov Institute of Ecology and Evolution, Russian Academy of Sciences [Moscow] (RAS), Lomonosov Moscow State University (MSU), Friedrich-Schiller-Universität = Friedrich Schiller University Jena [Jena, Germany], European Commission - Joint Research Centre [Ispra] (JRC), Netherlands Institute of Ecology (NIOO-KNAW), University of Freiburg [Freiburg], Department of Biometry and Environmental System Analysis, Albert-Ludwigs-Universität Freiburg, Centre d’Ecologie Fonctionnelle et Evolutive (CEFE), Université Paul-Valéry - Montpellier 3 (UPVM)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro - Montpellier SupAgro, Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro), Institut d'écologie et des sciences de l'environnement de Paris (iEES Paris ), Institut de Recherche pour le Développement (IRD)-Sorbonne Université (SU)-Université Paris-Est Créteil Val-de-Marne - Paris 12 (UPEC UP12)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Station d'Ecologie Théorique et Expérimentale (SETE), Centre National de la Recherche Scientifique (CNRS)-Fédération de Recherche Agrobiosciences, Interactions et Biodiversité (FR AIB), Université Toulouse III - Paul Sabatier (UT3), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Centre National de la Recherche Scientifique (CNRS)-Université Toulouse III - Paul Sabatier (UT3), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Centre National de la Recherche Scientifique (CNRS), University of Catania [Italy], Wageningen University and Research [Wageningen] (WUR), Freie Universität Berlin, Institute for Biodiversity and Ecosystem Dynamics (IBED), University of Amsterdam [Amsterdam] (UvA), Asian School of the Environment (ASE), Nanyang Technological University [Singapour], Georg-August-University = Georg-August-Universität Göttingen, National Agriculture and Food Research Organization (NARO), University of Nairobi (UoN), Commonwealth Scientific and Industrial Research Organisation [Canberra] (CSIRO), Santa Catarina State University (UDESC), Leibniz-Zentrum für Agrarlandschaftsforschung = Leibniz Centre for Agricultural Landscape Research (ZALF), Université de Sherbrooke (UdeS), National University of Río Cuarto = Universidad Nacional de Río Cuarto (UNRC), Brandenburg University of Technology [Cottbus – Senftenberg] (BTU), Ecologie fonctionnelle et biogéochimie des sols et des agro-écosystèmes (UMR Eco&Sols), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro - Montpellier SupAgro, Cornell University [New York], University College Dublin [Dublin] (UCD), Environnement Méditerranéen et Modélisation des Agro-Hydrosystèmes (EMMAH), Avignon Université (AU)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), University of Adelaide, University of Toronto, Ecologie et biologie des interactions (EBI), Université de Poitiers-Centre National de la Recherche Scientifique (CNRS), Ecosystèmes, biodiversité, évolution [Rennes] (ECOBIO), Université de Rennes 1 (UR1), Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut Ecologie et Environnement (INEE), Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Observatoire des Sciences de l'Univers de Rennes (OSUR), Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2), Université de Rennes (UNIV-RENNES)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2), Université de Rennes (UNIV-RENNES)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Centre National de la Recherche Scientifique (CNRS), ECT Oekotoxikologie GmbH, Institute of Biological, Environmental and Rural Sciences (IBERS), Biotechnology and Biological Sciences Research Council (BBSRC)-Aberystwyth University, Royal Agricultural University (RAU), University of Georgia [USA], State University of New York (SUNY), Department of Biodiversity, Ecology and Evolution [Madrid], Universidad Complutense de Madrid = Complutense University of Madrid [Madrid] (UCM), Yale University [New Haven], Universidad Nacional de Luján [Buenos Aires], Louis Bolk Institute (LBI), Trier University, Animal Biodiversity and Evolution, Institute of Evolutionary Biology (IBE), Department of Soil and Crop Sciences [Fort Collins], Biodiversity and Systematic Network, Instituto de Ecología A.C., Department of Biology [Fort Collins], Department of Biological Science and Environmental Studies, University of the Philippines - Mindanao, Faculty of Bioscience Engineering - Laboratory of Environmental Toxicology and Aquatic Ecology, Universiteit Gent = Ghent University [Belgium] (UGENT), Center for Forest Ecology and Productivity (RAS), Razi University of Kermanshah, USDA Forest Service, Department of Forest Ecology and Management, Swedish University of Agricultural Sciences (SLU), Josip Juraj Strossmayer University of Osijek, Agriculture engineering, Agroecology Postgraduate Program, Maranhão State University, Agriculture Victoria (AgriBio), Kyushu University [Fukuoka], Minnesota Pollution Control Agency, Department of Bioscience [Aarhus], Northern Kentucky University, Departamento de Agricultura, Sociedad y Ambiente, EI Colegio de la Frontera Sur (ECOSUR), Consejo Nacional de Ciencia y Tecnología [Mexico] (CONACYT)-Consejo Nacional de Ciencia y Tecnología [Mexico] (CONACYT), Soil Physics and Land Management Group, University of Jyväskylä (JYU), College of Agriculture, Environmental and Human Sciences, Lincoln University of Missouri, School of Forest Resources and Conservation [Gainesville] (UF|IFAS|FFGS), Institute of Food and Agricultural Sciences [Gainesville] (UF|IFAS), University of Florida [Gainesville] (UF)-University of Florida [Gainesville] (UF), Banat University of Agricultural Sciences and Veterinary Medicine (USAMVBT), Christian-Albrechts University of Kiel, Tallinn University of Technology (TTÜ), University of Idaho [Moscow, USA], Faculty of Food and Agricultural Sciences, Fukushima University, Matej Bel University (UMB), UK Centre for Ecology & Hydrology, Natural Environment Research Council (NERC), Université Nangui Abrogoua (UNA), Faculty of Natural Resources and Marine Sciences [Tarbiat], Tarbiat Modares University [Tehran], Natural Resources Institute Finland (LUKE), Department of Zoology, Pachhunga University College, Skolkovo Institute of Science and Technology [Moscow] (Skoltech), Sol Agro et hydrosystème Spatialisation (SAS), Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-INSTITUT AGRO Agrocampus Ouest, University of Hawai'i [Honolulu] (UH), Universidad Central de Venezuela (UCV), Instituto de Zoología y Ecología Tropical (IZET), Oklahoma State University [Stillwater] (OSU), Agrosystèmes Biodiversifiés (UMR ABSys), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre International de Hautes Etudes Agronomiques Méditerranéennes - Institut Agronomique Méditerranéen de Montpellier (CIHEAM-IAMM), Centre International de Hautes Études Agronomiques Méditerranéennes (CIHEAM)-Centre International de Hautes Études Agronomiques Méditerranéennes (CIHEAM)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut Agro - Montpellier SupAgro, Département Performances des systèmes de production et de transformation tropicaux (Cirad-PERSYST), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad), Czech University of Life Sciences Prague (CZU), Tochigi Prefectural Museum, Thuenen-Institute of Biodiversity, Thuenen-Institute of Organic Farming, University of Extremadura, INDEHESA, Forestry School, Conservación de la Biodiversidad, El Colegio de la Frontera Sur, Doshisha University [Kyoto], Department of Earth and Environmental Sciences [Leuven-Heverlee], Catholic University of Leuven - Katholieke Universiteit Leuven (KU Leuven), Research Institute for Nature and Forest (INBO), School of Agricultural, Forest and Food Sciences, Bern University of Applied Sciences (BFH), Natural Area Consultants, Department of Zoology, PSMO College, CSIRO Marine and Atmospheric Research (CSIRO-MAR), Adaptation et diversité en milieu marin (AD2M), Institut national des sciences de l'Univers (INSU - CNRS)-Centre National de la Recherche Scientifique (CNRS)-Station biologique de Roscoff (SBR), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS), Phipps Conservatory and Botanical Gardens (PHIPPS), Universidad de Alcalá - University of Alcalá (UAH), Forest Ecology and Restoration Group, Department of Life Sciences, Mécanismes Adaptatifs et Evolution (MECADEV), Muséum national d'Histoire naturelle (MNHN)-Centre National de la Recherche Scientifique (CNRS), Technische Universität Munchen - Université Technique de Munich [Munich, Allemagne] (TUM), Department of Ecology and Ecosystem Management, Geobotany, Tembotov Institute of Ecology of Mountain Territories, Russian Academy of Sciences, King Abdulaziz University, Center of Excellence in Environmental Studies, Global Change Ecology and Evolution Research Groupp (GloCEE), Department of Life Sciences, University of Alcalá, University of Minnesota [Twin Cities] (UMN), University of Minnesota System, Postgraduate Program in Biodiversity and Conservation, Federal University of Maranhão, Uniwersytet Jagielloński w Krakowie = Jagiellonian University (UJ), College of Natural Resources, University of Wisconsin, The Morton Arboretum, Department Engineering for Crop Production, Leibniz Institute for Agricultural Engineering and Bioeconomy (ATB), School of Agriculture and Food Science, UCD School of Geography, UCD Earth Institute, University College, Technische Universität Braunschweig = Technical University of Braunschweig [Braunschweig], Institute of Geoecology, Leopold Franzens Universität Innsbruck - University of Innsbruck, European Academy Bozen/Bolzano (EURAC), Institute for Alpine Environment, European Academy of Bozen-Bolzano (EURAC), Institute of Physicochemical and Biological Problems in Soil Science, RAS, Institute of Mathematical Problems in Biology (IMPB RAS), Post Graduate Department of Zoology, Khalsa College Amritsar, Morton K. Blaustein Department of Earth and Planetary Sciences [Baltimore], Johns Hopkins University (JHU), Universidad de La Laguna [Tenerife - SP] (ULL), Kochi University, Juárez Autonomous University of Tabasco, Nanotechnology Engineering, Multidisciplinary Academic Division of Jalpa de Méndez, Food & Agriculture, WWF-Netherlands, Universidad Pública de Navarra [Espagne] = Public University of Navarra (UPNA), Department of Soil, Water and Climate, University of Minnesota System-University of Minnesota System, Earth Innovation Institute, University of California [Davis] (UC Davis), University of California (UC), Department of Natural Resources and Environmental Management, University of Hawaii, McGill University = Université McGill [Montréal, Canada], Natural resource sciences, The Nature Conservancy, Justus-Liebig-Universität Gießen = Justus Liebig University (JLU), Southwest Minzu University [Chengdu], Institute of Industrial Ecology Problems of the North of the Kola Science Center of RAS, Henan Agricultural University, Faculty of Biological and Environmental Sciences [Helsinki], Helsingin yliopisto = Helsingfors universitet = University of Helsinki, H.R.P.P., B.K-R., and the sWorm workshops were supported by the sDiv [Synthesis Centre of the German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig (DFG FZT 118)]. H.R.P.P., O.F. and N.E. acknowledge funding by the European Research Council (ERC) under the European Union's Horizon 2020 research and innovation programme (grant agreement no. 677232 to NE). K.S.R. and W.H.v.d.P. were supported by ERC-ADV grant 323020 to W.H.v.d.P. Also supported by iDiv (DFG FZT118) Flexpool proposal 34600850 (C.A.G. and N.E.), the Academy of Finland (285882) and the Natural Sciences and Engineering Research Council of Canada (postdoctoral fellowship and RGPIN-2019-05758) (E.K.C.), German Federal Ministry of Education and Research (01LO0901A) (D.J.R.), ERC-AdG 694368 (M.R.), the TULIP Laboratory of Excellence (ANR-10-LABX-41) (M.L), and the BBSRC David Phillips Fellowship to F.T.d.V. (BB/L02456X/1). In addition, data collection was funded by the Russian Foundation for Basic Research (12-04-01538-a, 12-04-01734-a, 14-44-03666-r_center_a, 15-29-02724-ofi_m, 16-04-01878-a 19-05-00245, 19-04-00-609-a), Tarbiat Modares University, Aurora Organic Dairy, UGC(NERO) (F. 1-6/Acctt./NERO/2007-08/1485), Natural Sciences and Engineering Research Council (RGPIN-2017-05391), Slovak Research and Development Agency (APVV-0098-12), Science for Global Development through Wageningen University, Norman Borlaug LEAP Programme and International Atomic Energy Agency (IAEA), Sao Paulo Research Foundation - FAPESP (12/22510-8), Oklahoma Agricultural Experiment Station, INIA - Spanish Agency (SUM 2006-00012-00-0), Royal Canadian Geographical Society, Environmental Protection Agency (Ireland) (2005-S-LS-8), University of Hawai'i at Manoa (HAW01127H, HAW01123M), European Union FP7 (FunDivEurope, 265171, ROUTES 265156), U.S. Department of the Navy, Commander Pacific Fleet (W9126G-13-2-0047), Science and Engineering Research Board (SB/SO/AS-030/2013) Department of Science and Technology, New Delhi, India, Strategic Environmental Research and Development Program (SERDP) of the U.S. Department of Defense (RC-1542), Maranhao State Research Foundation (FAPEMA 03135/13, 02471/17), Coordination for the Improvement of Higher Education Personnel (CAPES 3281/2013), Ministry of Education, Youth and Sports of the Czech Republic (LTT17033), Colorado Wheat Research Foundation, Zone Atelier Alpes, French National Research Agency (ANR-11-BSV7-0020, ANR-09-STRA-0002, ANR 06 BIODIV 0009), Austrian Science Fund (P16027, T441), Landwirtschaftliche Rentenbank Frankfurt am Main, Welsh Government and the European Agricultural Fund for Rural Development (Project Ref. A AAB 62 03 qA731606), SEPAQ, Ministry of Agriculture and Forestry of Finland, Science Foundation Ireland (EEB0061), University of Toronto (Faculty of Forestry), National Science and Engineering Research Council of Canada, Haliburton Forest & Wildlife Reserve, NKU College of Arts & Sciences Grant, osterreichische Forschungsforderungsgesellschaft (837393 and 837426), Mountain Agriculture Research Unit of the University of Innsbruck, Higher Education Commission of Pakistan, Kerala Forest Research Institute, Peechi, Kerala, UNEP/GEF/TSBF-CIAT Project on Conservation and Sustainable Management of Belowground Biodiversity, Ministry of Agriculture and Forestry of Finland, Complutense University of Madrid/European Union FP7 project BioBio (FPU UCM 613520), GRDC, AWI, LWRRDC, DRDC, CONICET (National Scientific and Technical Research Council) and FONCyT (National Agency of Scientific and Technological Promotion) (PICT, PAE, PIP), Universidad Nacional de Lujan y FONCyT (PICT 2293 (2006)), Fonds de recherche sur la nature et les technologies du Quebec (131894), Deutsche Forschungsgemeinschaft (SCHR1000/3-1, SCHR1000/6-1, 6-2 (FOR 1598), WO 670/7-1, WO 670/7-2, & SCHA 1719/1-2), CONACYT (FONDOS MIXTOS TABASCO/PROYECTO11316), NSF (DGE-0549245, DGE-0549245, DEB-BE-0909452, NSF1241932, LTER Program DEB-97-14835), Institute for Environmental Science and Policy at the University of Illinois at Chicago, Dean's Scholar Program at UIC, Garden Club of America Zone VI Fellowship in Urban Forestry from the Casey Tree Endowment Fund, J.E. Weaver Competitive Grant from the Nebraska Chapter of The Nature Conservancy, The College of Liberal Arts and Sciences at Depaul University, Elmore Hadley Award for Research in Ecology and Evolution from the UIC Dept. of Biological Sciences, Spanish CICYT (AMB96-1161, REN2000-0783/GLO, REN2003-05553/GLO, REN2003-03989/GLO, CGL2007-60661/BOS), Yokohama National University, MEXT KAKENHI (25220104), Japan Society for the Promotion of Science KAKENHI (25281053, 17KT0074, 25252026), ADEME (0775C0035), Ministry of Science, Innovation and Universities of Spain (CGL2017-86926-P), Syngenta Philippines, UPSTREAM, LTSER (Val Mazia/Matschertal), Marie Sklodowska Curie Postdoctoral Fellowship (747607), National Science & Technology Base Resource Survey Project of China (2018FY100306), McKnight Foundation (14-168), Program of Fundamental Researches of Presidium of Russian Academy of Sciences (AAAA-A18-118021490070-5), Brazilian National Council for Scientific and Technological Development (CNPq 310690/2017-0, 404191/2019-3, 307486/2013-3), French Ministry of Foreign and European Affairs, Bavarian Ministry for Food, Agriculture and Forestry (Project No B62), INRA AIDY project, MIUR PRIN 2008, Idaho Agricultural Experiment Station, Estonian Science Foundation, Ontario Ministry of the Environment, Canada, Russian Science Foundation (16-17-10284), National Natural Science Foundation of China (41371270), Australian Research Council (FT120100463), USDA Forest Service-IITF. Open Access funding enabled and organized by Projekt DEAL., ANR-10-LABX-0041,TULIP,Towards a Unified theory of biotic Interactions: the roLe of environmental(2010), ANR-11-BSV7-0020,METABAR,Metacode-barre ADN pour une nouvelle génération de suivi de la biodiversité(2011), ANR-09-STRA-0002,FORGECO,Du diagnostic à l'action: créer les conditions d'une gestion integrée et viable des écosystèmes forestiers sur les territoires(2009), ANR-06-BDIV-0009,AMAZ_BD,Biodiversité des paysages amazoniens. Déterminants socio-économiques et productio de biens et services écosystèmiques(2006), European Project: 677232,H2020,ERC-2015-STG,ECOWORM(2016), European Project: 323020,EC:FP7:ERC,ERC-2012-ADG_20120314,SPECIALS(2013), European Project: 265171,EC:FP7:ENV,FP7-ENV-2010,FUNDIVEUROPE(2010), European Project: 265156,EC:FP7:ENV,FP7-ENV-2010,ROUTES(2011), European Project: ERC-2015-AdG 694368, European Project: 227161,EC:FP7:KBBE,FP7-KBBE-2008-2B,BIOBIO(2009), Terrestrial Ecology (TE), Université Paul-Valéry - Montpellier 3 (UPVM)-École Pratique des Hautes Études (EPHE), Université de Toulouse (UT)-Université de Toulouse (UT)-Centre National de la Recherche Scientifique (CNRS)-Université Toulouse III - Paul Sabatier (UT3), Université de Toulouse (UT)-Université de Toulouse (UT)-Centre National de la Recherche Scientifique (CNRS), Department of Natural Resources & The Environment [CALS], College of Agriculture and Life Sciences [Cornell University] (CALS), Cornell University [New York]-Cornell University [New York], Department of Entomology [CALS], Université de Rennes (UR)-Institut Ecologie et Environnement (INEE), Université de Rennes (UR)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Centre National de la Recherche Scientifique (CNRS), Universiteit Gent = Ghent University (UGENT), Kyushu University, Universidad de Extremadura - University of Extremadura (UEX), Adaptation et diversité en milieu marin (ADMM), Institut national des sciences de l'Univers (INSU - CNRS)-Station biologique de Roscoff (SBR), Faculty of Biological and Environmental Sciences, Organismal and Evolutionary Biology Research Programme, Universidad Pública de Navarra / Nafarroako Unibertsitate Publikoa. ISFOOD - Institute for Innovation and Sustainable Development in Food Chain, Universidad Pública de Navarra. Departamento de Ciencias, Nafarroako Unibertsitate Publikoa. Zientziak Saila, Global Soil Biodiversity Initiative and School of Global Environmental Sustainability, Colorado State University, Universidade Positivo, Senckenberg Museum for Natural History Görlitz, Department of Soil Zoology, Université Paul-Valéry - Montpellier 3 (UPVM)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-École pratique des hautes études (EPHE), Université Paris sciences et lettres (PSL)-Université Paris sciences et lettres (PSL)-Université de Montpellier (UM)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD [France-Sud])-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut national d'enseignement supérieur pour l'agriculture, l'alimentation et l'environnement (Institut Agro)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Institut de Recherche pour le Développement (IRD)-Sorbonne Université (SU)-Université Paris-Est Créteil Val-de-Marne - Paris 12 (UPEC UP12)-Centre National de la Recherche Scientifique (CNRS)-Université de Paris (UP)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE), Station d'écologie théorique et expérimentale (SETE), Université Fédérale Toulouse Midi-Pyrénées-Université Fédérale Toulouse Midi-Pyrénées-Centre National de la Recherche Scientifique (CNRS)-Observatoire Midi-Pyrénées (OMP), Météo France-Centre National d'Études Spatiales [Toulouse] (CNES)-Université Fédérale Toulouse Midi-Pyrénées-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD)-Météo France-Centre National d'Études Spatiales [Toulouse] (CNES)-Centre National de la Recherche Scientifique (CNRS)-Institut de Recherche pour le Développement (IRD), University of Göttingen - Georg-August-Universität Göttingen, Centre of Biodiversity and Sustainable Land Use, Department of Silviculture and Forest Ecology of the Temperate Zones, Georg-August-University [Göttingen], Faculty of Forest Sciences and Forest Ecology, Institute for Agro-Environmental Sciences, Rwanda Institute for Conservation Agriculture (RICA), Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Institut de Recherche pour le Développement (IRD)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), UCD School of Biology & Environmental Science, UCD Earth Institute, University College Dublin, School of Agriculture, Food and Wine, Waite Research Institute, Faculty of Forestry, University of Toronto, Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Observatoire des Sciences de l'Univers de Rennes (OSUR)-Centre National de la Recherche Scientifique (CNRS), Aberystwyth University, Odum School of Ecology, Department of Biological Sciences, SUNY Cortland, Yale School Forestry & Environment Studies, Ciencias Básicas, Instituto de Ecología y Desarrollo Sustentable -INEDES, Universidad Nacional de Lujan, Université Nangui Abrogoua, Tarbiat Modaras University, AGROCAMPUS OUEST, Oklahoma State University [Stillwater], Centre de Coopération Internationale en Recherche Agronomique pour le Développement (Cirad)-Centre international d'études supérieures en sciences agronomiques (Montpellier SupAgro)-Centre International de Hautes Etudes Agronomiques Méditerranéennes - Institut Agronomique Méditerranéen de Montpellier (CIHEAM-IAMM), Centre International de Hautes Études Agronomiques Méditerranéennes (CIHEAM)-Centre International de Hautes Études Agronomiques Méditerranéennes (CIHEAM)-Institut national d’études supérieures agronomiques de Montpellier (Montpellier SupAgro), Station biologique de Roscoff (SBR), Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Sorbonne Université (SU)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), Department of Animal Biology (Zoology area), Science Faculty, University of La Laguna, University of California, Justus-Liebig-University [Gießen, Germany], University of Helsinki, HELEN R. P. PHILLIPS, German Centre for Integrative Biodiversity Research, ERIN K. CAMERON, Saint Mary’s University, NICO EISENHAUER, German Centre for Integrative Biodiversity Research, Leipzig University., Wageningen University, JOSÉ ANTONIO TALAVERA, University of La Laguna, DOLORES TRIGO, University Complutense of Madrid, JIRO TSUKAMOTO, Kochi University, SHEILA URIBE-LÓPEZ, Juárez Autonomous University of Tabasco, ANNE W. DE VALENÇA, Unit Food & Agriculture, WWF-Netherlands, IÑIGO VIRTO, Universidad Pública de Navarra, ADRIAN A. WACKETT, University of Minnesota, MATTHEW W. WARREN, Earth Innovation Institute, WEIXIN ZHANG, Henan University, DANIEL CLUZEAU, Université de Rennes, ANJA COORS, ECT Oekotoxikologie GmbH, FELICITY V. CROTTY, Aberystwyth Universtiy, Royal Agricultural University, JASMINE M. CRUMSEY, University of Georgia, Saint Marys University, ELIZABETH M. BACH, Colorado State University, MARIE L. C. BARTZ, Universidade Positivo, University of Coimbra, JOANNE M. BENNETT, German Centre for Integrative Biodiversity Research, Martin Luther University Halle-Wittenberg, RÉMY BEUGNON, German Centre for Integrative Biodiversity Research, MARIA J. I. BRIONES, Universidad de Vigo, GEORGE GARDNER BROWN, CNPF, OLGA FERLIAN, German Centre for Integrative Biodiversity Research, KONSTANTIN B. GONGALSKY, Russian Academy of Sciences, Lomonosov Moscow State University, CARLOS A. GUERRA, German Centre for Integrative Biodiversity Research, BIRGITTA KÖNIG-RIES, German Centre for Integrative Biodiversity Research, Friedrich Schiller University, JULIA J. KREBS, German Centre for Integrative Biodiversity Research, ALBERTO ORGIAZZI, European Commission, Joint Research Centre, KELLY S. RAMIREZ, Netherlands Institute of Ecology, DAVID J. RUSSELL, Senckenberg Museum for Natural History Görlitz, BENJAMIN SCHWARZ, University of Freiburg, DIANA H. WALL, Colorado State University, ULRICH BROSE, German Centre for Integrative Biodiversity Research, Friedrich Schiller University Jena, THIBAUD DECAËNS, Univ Paul Valéry Montpellier, PATRICK LAVELLE, Institut d’Ecologie et des Sciences de l’Environnement, MICHEL LOREAU, Theoretical and Experimental Ecology Station, JÉRÔME MATHIEU, Institute of Ecology and Environmental Sciences of Paris, Institut d’Ecologie et des Sciences de l’Environnement de Paris, CHRISTIAN MULDER, University of Catania, WIM H. VAN DER PUTTEN, Netherlands Institute of Ecology, MATTHIAS C. RILLIG, Freie Universität Berlin, MADHAV P. THAKUR, Netherlands Institute of Ecology, FRANCISKA T. DE VRIES, University of Amsterdam, DAVID A. WARDLE, Nanyang Technological University, CHRISTIAN AMMER, University of Göttingen, SABINE AMMER, University of Göttingen, MIWA ARAI, National Agriculture and Food Research Organization, FREDRICK O. AYUKE, University of Nairobi, Rwanda Institute for Conservation Agriculture, GEOFF H. BAKER, Health & Biosecurity, DILMAR BARETTA, Santa Catarina State University, DIETMAR BARKUSKY, Leibniz Centre for Agricultural Landscape Research, ROBIN BEAUSÉJOUR, Université de Sherbrooke, JOSE C. BEDANO, National University of Rio Cuarto, KLAUS BIRKHOFER, Brandenburg University of Technology, ERIC BLANCHART, Institut Agro, BERND BLOSSEY, Cornell University, THOMAS BOLGER, University College Dublin, ROBERT L. BRADLEY, Université de Sherbrooke, MICHEL BROSSARD, Institut Agro, JAMES C. BURTIS, Cornell University, YVAN CAPOWIEZ, Site Agroparc, TIMOTHY R. CAVAGNARO, The University of Adelaide, AMY CHOI, University of Toronto, JULIA CLAUSE, Université de Poitiers, ANDREA DÁVALOS, SUNY Cortland, DARÍO J. DÍAZ COSÍN, University Complutense of Madrid, ANNISE M. DOBSON, Yale University, ANAHÍ DOMÍNGUEZ, National University of Rio Cuarto, ANDRÉS ESTEBAN DUHOUR, Universidad Nacional de Luján, NICK VAN EEKEREN, Louis Bolk Institute, CHRISTOPH EMMERLING, University of Trier, LILIANA B. FALCO, Universidad Nacional de Luján, ROSA FERNÁNDEZ, Institute of Evolutionary Biology, STEVEN J. FONTE, Colorado State University, CARLOS FRAGOSO, Institute of Ecology A.C., ANDRÉ L. C. FRANCO, Colorado State University, ABEGAIL FUSILERO, University of the Philippines Mindanao, Ghent University, ANNA P. GERASKINA, Center for Forest Ecology and Productivity RAS, SHAIESTE GHOLAMI, Razi University, GRIZELLE GONZÁLEZ, International Institute of Tropical Forestry, MICHAEL J. GUNDALE, Swedish University of Agricultural Sciences, MÓNICA GUTIÉRREZ LÓPEZ, University Complutense of Madrid, BRANIMIR K. HACKENBERGER, University of Osijek, DAVORKA K. HACKENBERGER, University of Osijek, LUIS M. HERNÁNDEZ, Maranhão State University, JEFF R. HIRTH, Department of Jobs, Precincts and Regions, Agriculture Victoria, TAKUO HISHI, Kyushu University, ANDREW R. HOLDSWORTH, Minnesota Pollution Control Agency, MARTIN HOLMSTRUP, Aarhus University, KRISTINE N. HOPFENSPERGER, Northern Kentucky University, ESPERANZA HUERTA LWANGA, El Colegio de la Frontera Sur, Wageningen University & Research, VEIKKO HUHTA, University of Jyväskylä, TUNSISA T. HURISSO, Colorado State University, Lincoln University of Missouri, BASIL V. IANNONE III, University of Florida, MADALINA IORDACHE, University of Agricultural Sciences and Veterinary Medicine of Banat 'King Michael the 1st of Romania', ULRICH IRMLER, University of Kiel, MARI IVASK, Tallinn University of Technology, JUAN B. JESÚS, University Complutense of Madrid, JODI L. JOHNSON-MAYNARD, University of Idaho, MONIKA JOSCHKO, Leibniz Centre for Agricultural Landscape Research, NOBUHIRO KANEKO, Fukushima University, RADOSLAVA KANIANSKA, Matej Bel University, AIDAN M. KEITH, Leibniz Centre for Agricultural Landscape Research, MARIA L. KERNECKER, Leibniz Centre for Agricultural Landscape Research, ARMAND W. KONÉ, Université Nangui Abrogoua, YAHYA KOOCH, Tarbiat Modares University, SANNA T. KUKKONEN, Natural Resources Institute Finland, H. LALTHANZARA, Pachhunga University College, DANIEL R. LAMMEL, Freie Universität Berlin, IURII M. LEBEDEV, Russian Academy of Sciences, M.V. Lomonosov Moscow State University, Skolkovo Institute of Science and Technology, EDITH LE CADRE, Institut Agro, NOA K. LINCOLN, University of Hawai’i at Manoa, DANILO LÓPEZ-HERNÁNDEZ, Universidad Central de Venezuela, SCOTT R. LOSS, Oklahoma State University, RAPHAEL MARICHAL, Univ Montpellier, RADIM MATULA, Czech University of Life Sciences Prague, YUKIO MINAMIYA, Tochigi Prefectural Museum, JAN HENDRIK MOOS, Thuenen-Institute of Biodiversity, GERARDO MORENO, University of Extremadura, ALEJANDRO MORÓN-RÍOS, El Colegio de la Frontera Sur, HASEGAWA MOTOHIRO, Doshisha University, BART MUYS, Department of Earth & Environmental Sciences, Division of Forest, Nature and Landscape, JOHAN NEIRYNCK, Research Institute for Nature and Forest, LINDSEY NORGROVE, Bern University of Applied Sciences, MARTA NOVO, University Complutense of Madrid, VISA NUUTINEN, Natural Resources Institute Finland, VICTORIA NUZZO, Natural Area Consultants, P. MUJEEB RAHMAN, PSMO College, JOHAN PANSU, CSIRO Ocean and Atmosphere, Sorbonne Université, SHISHIR PAUDEL, Oklahoma State University, Phipps Conservatory and Botanical Gardens, GUÉNOLA PÉRÈS, CNRS-Université de Rennes, Institut Agro, LORENZO PÉREZ CAMACHO, University of Alcalá, JEAN-FRANÇOIS PONGE, Muséum National d’Histoire Naturelle, JÖRG PRIETZEL, Technical University of Munich, IRINA B. RAPOPORT, Russian Academy of Sciences, MUHAMMAD IMTIAZ RASHID, King Abdulaziz University, SALVADOR REBOLLO, University of Alcalá, MIGUEL Á. RODRÍGUEZ, University of Alcalá, ALEXANDER M. ROTH, University of Minnesot, Friends of the Mississippi River, GUILLAUME X. ROUSSEAU, Maranhão State University, Federal University of Maranhão, ANNA ROZEN, University of Wisconsin, EHSAN SAYAD, Razi University, LOES VAN SCHAIK, Wageningen University & Research, BRYANT SCHARENBROCH, University of Wisconsin, MICHAEL SCHIRRMANN, Leibniz Institute for Agricultural Engineering and Bioeconomy, OLAF SCHMIDT, University College Dublin, Agriculture and Food Science Centre, BORIS SCHRÖDER, Technische Universität Braunschweig, JULIA SEEBER, University of Innsbruck, MAXIM P. SHASHKOV, Russian Academy of Sciences, JASWINDER SINGH, Khalsa College Amritsar, SANDY M. SMITH, University of Toronto, MICHAEL STEINWANDTER, Institute for Alpine Environment, KATALIN SZLAVECZ, Johns Hopkins University, EMILY R. WEBSTER, University of California, NATHANIEL H. WEHR, University of Hawaii, JOANN K. WHALEN, Natural Resource Sciences, McGill University, MICHAEL B. WIRONEN, The Nature Conservancy, VOLKMAR WOLTERS, Animal Ecology, Justus Liebig University, PENGFEI WU, Southwest Minzu University, IRINA V. ZENKOVA, Institute of North Industrial Ecology Problems, Institut de Recherche pour le Développement (IRD)-Météo France-Centre National d'Études Spatiales [Toulouse] (CNES)-Centre National de la Recherche Scientifique (CNRS)-Université Fédérale Toulouse Midi-Pyrénées-Institut de Recherche pour le Développement (IRD)-Météo France-Centre National d'Études Spatiales [Toulouse] (CNES)-Centre National de la Recherche Scientifique (CNRS), Centre National de la Recherche Scientifique (CNRS)-Observatoire des Sciences de l'Univers de Rennes (OSUR)-Institut Ecologie et Environnement (INEE), Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université de Rennes 1 (UR1), Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES), Centre National de la Recherche Scientifique (CNRS)-Station biologique de Roscoff (SBR), and Technical University of Munich (TUM)
- Subjects
Data Descriptor ,Distribuição Geográfica ,Plan_S-Compliant-OA ,Soil ,Biomass ,biodiversity ,Diversity ,Ecology ,Biodiversidade ,Biodiversity ,eliöyhteisöt ,maaperäeliöstö ,PE&RC ,Computer Science Applications ,Multidisciplinary Sciences ,Biogeography ,international ,1181 Ecology, evolutionary biology ,Ecosystem engineers ,Science & Technology - Other Topics ,Statistics, Probability and Uncertainty ,Information Systems ,Statistics and Probability ,lierot ,Science ,Invertebrados ,Library and Information Sciences ,[SDV.SA.SDS]Life Sciences [q-bio]/Agricultural sciences/Soil study ,Ecology and Environment ,Education ,eliömaantiede ,[SDV.EE.ECO]Life Sciences [q-bio]/Ecology, environment/Ecosystems ,Minhoca ,Serviço ambiental ,BIODIVERSITY CHANGE ,Life Science ,Ecosystem services ,Earthworms ,Datasets ,Animals ,Spatial distribution ,Community ecology ,Oligochaeta ,Laboratorium voor Nematologie ,Ecosystem ,1172 Environmental sciences ,biogeography ,Science & Technology ,LAND-USE ,Biology and Life Sciences ,PLATFORM ,Bodemfysica en Landbeheer ,Ecología ,Ecossistema ,biodiversiteetti ,Soil Physics and Land Management ,Solo ,Biologia do Solo ,maaperäeläimistö ,570 Life sciences ,biology ,eartworm ,abundance ,biomass ,diversity ,Laboratory of Nematology ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology ,COMMUNITIES ,community ecology - Abstract
Earthworms are an important soil taxon as ecosystem engineers, providing a variety of crucial ecosystem functions and services. Little is known about their diversity and distribution at large spatial scales, despite the availability of considerable amounts of local-scale data. Earthworm diversity data, obtained from the primary literature or provided directly by authors, were collated with information on site locations, including coordinates, habitat cover, and soil properties. Datasets were required, at a minimum, to include abundance or biomass of earthworms at a site. Where possible, site-level species lists were included, as well as the abundance and biomass of individual species and ecological groups. This global dataset contains 10,840 sites, with 184 species, from 60 countries and all continents except Antarctica. The data were obtained from 182 published articles, published between 1973 and 2017, and 17 unpublished datasets. Amalgamating data into a single global database will assist researchers in investigating and answering a wide variety of pressing questions, for example, jointly assessing aboveground and belowground biodiversity distributions and drivers of biodiversity change., Measurement(s) earthworm communities • Abundance • organic material • Diversity • environmental properties Technology Type(s) digital curation Factor Type(s) location Sample Characteristic - Organism Lumbricina Sample Characteristic - Environment soil Sample Characteristic - Location global Machine-accessible metadata file describing the reported data: 10.6084/m9.figshare.13399118
- Published
- 2021
20. Global data on earthworm abundance, biomass, diversity and corresponding environmental properties
- Author
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Phillips, Helen, R. P., Bach, Elizabeth M., Bartz, Marie L. C., Bennett, Joanne, Beugnon, Rémy, Briones, Maria J. I., Brown, George, Ferlian, Olga, Gongalsky, Konstantin B., Guerra, Carlos A., König-Ries, Birgitta, Holdsworth, Andrew R., Coors, Anja, Crotty, Felicity V., Crumsey, Jasmine M., Dávalos, Andrea, Diaz Cosin, Darío J., Loss, Scott R., Dobson, Annise M., Dominguez, Anahí, Esteban Duhour, Andrés, Schirrmann, Michael, Eekeren, Nick van, Holmstrup, Martin, Emmerling, Christoph, Falco, Liliana B., Fernández, Rosa, Fonte, Steven J., Fragoso, Carlos, Franco, André L. C., Marichal, Raphael, Fusilero, Abegail T., Moreno, Gerardo, Geraskina, Anna P., Gholami, Shaieste, Hopfensperger, Kristine N., González, Grizelle, Gundale, Michael J., Gutiérrez López, Mónica, Hackenberger, Branimir K., Hackenberger, Davorka K., Hernández, Luis M., Hirth, Jeff R., Morón-Ríos, Alejandro, Huerta Lwanga, Esperanza, Huhta, Veikko, Hurisso, Tunsisa T., Iannone III, Basil V., Iordache, Madalina, Ramirez, Kelly S., Irmler, Ulrich, Minamiya, Yukio, Ivask, Mari, Jesus Lidon, Juan B., Motohiro, Hasegawa, Johnson-Maynard, Jodi L., Joschko, Monika, Kaneko, Nobuhiro, Kanianska, Radoslava, Keith, Aidan M., Kernecker, Maria L., Scharenbroch, Bryant C., Koné, Armand W., Kooch, Yahya, Hendrik Moos, Jan, Muys, Bart, Kukkonen, Sanna T., Lalthanzara, H., Lammel, Daniel R., Lebedev, Iurii M., Le Cadre, Edith, Lincoln, Noa K., López-Hernández, Danilo, Neirynck, Johan, Krebs, Julia, Norgrove, Lindsey, Novo, Marta, Nuutinen, Visa, Choi, Amy, Nuzzo, Victoria, Schmidt, Olaf, Rahman, P. Mujeeb, Pansu, Johan, Paudel, Shishir, Pérès, Guénola, Pérez-Camacho, Lorenzo, Ponge, Jean-François, Orgiazzi, Alberto, Prietzel, Jörg, Wall, Diana H., Rapoport, Irina B., Imtiaz Rashid, Muhammad, Schröder, Boris, Rebollo, Salvador, Rodríguez, Miguel Á., Roth, Alexander M., Rousseau, Guillaume X., Rozen, Anna, Sayad, Ehsan, Schaik, Loes van, Brose, Ulrich, Seeber, Julia, Shashkov, Maxim P., Singh, Jaswinder, Smith, Sandy M., Steinwandter, Michael, Capowiez, Yvan, Szlavecz, Katalin, Russell, David, Talavera, José A., Trigo, Dolores, Decaëns, Thibaud, Tsukamoto, Jiro, Uribe-López, Sheila, Valença, Anne W. de, Virto, Iñigo, Wackett, Adrian A., Warren, Matthew W., Cavagnaro, Timothy R., Webster, Emily R., Wehr, Nathaniel H., Schwarz, Benjamin, Lavelle, Patrick, Wironen, Michael B., Wolters, Volkmar, Wu, Pengfei, Zenkova, Irina V. Z., Zhang, Weixin, Cameron, Erin K., Eisenhauer, Nico, Loreau, Michel, Mathieu, Jérôme, Mulder, Christian, Putten, Wim H. van der, Rillig, Matthias C., Matula, Radim, Thakur, Madhav P., Clause, Julia, Vries, Franciska T. de, Wardle, David A., Ammer, Sabine, Arai, Miwa, Ayuke, Fredrick O., Baker, Geoff H., Baretta, Dilmar, Barkusky, Dietmar, Hishi, Takuo, Beauséjour, Robin, Bedano, José C., Cluzeau, Daniel, Birkhofer, Klaus, Blanchart, Eric, Blossey, Bernd, Bolger, Thomas, Bradley, Robert L., Brossard, Michel, Burtis, James C., German Research Foundation, European Commission, Academy of Finland, Natural Sciences and Engineering Research Council of Canada, Federal Ministry of Education and Research (Germany), European Research Council, Labex TULIP, Agence Nationale de la Recherche (France), Biotechnology and Biological Sciences Research Council (UK), Russian Foundation for Basic Research, Tarbiat Modares University, Aurora Organic Dairy, Slovak Research and Development Agency, Wageningen University and Research Centre, International Atomic Energy Agency, Fundação de Amparo à Pesquisa do Estado de São Paulo, Oklahoma State University, CSIC - Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Royal Canadian Geographical Society, Environmental Protection Agency (Ireland), University of Hawaii at Manoa, U.S. Navy, Department of Science and Technology (India), Department of Defense (US), Fundação de Amparo à Pesquisa e ao Desenvolvimento Científico e Tecnológico do Maranhão, Coordenação de Aperfeiçoamento de Pessoal de Nível Superior (Brasil), Ministry of Education, Youth and Sports (Czech Republic), Colorado Wheat Research Foundation, Zone Atelier Alpes, Austrian Science Fund, Rentenbank, Welsh Government, European Agricultural Fund for Rural Development, Finnish Ministry of Agriculture and Forestry, Science Foundation Ireland, University of Toronto, Haliburton Forest & Wildlife Reserve, Arts and Sciences, Northern Kentucky University, University of Innsbruck, Higher Education Commission (Pakistan), Kerala Forest Research Institute, Universidad Complutense de Madrid, Consejo Nacional de Investigaciones Científicas y Técnicas (Argentina), Fondo para la Investigación Científica y Tecnológica (Argentina), Universidad Nacional de Luján, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Fonds de Recherche du Québec, Institute for Environmental Science and Policy, University of Illinois, Casey Tree, College of Liberal Arts and Social Sciences, DePaul University, Comisión Interministerial de Ciencia y Tecnología, CICYT (España), Japan Society for the Promotion of Science, McKnight Foundation, Russian Academy of Sciences, Conselho Nacional de Desenvolvimento Científico e Tecnológico (Brasil), Ministère de l'Europe et des Affaires étrangères (France), Bavarian Ministry for Food, Agriculture and Forestry, Ministero dell'Istruzione, dell'Università e della Ricerca, Idaho Agricultural Experiment Station, Estonian Science Foundation, Ministry of the Environment, Conservation and Parks (Ontario), National Natural Science Foundation of China, and Australian Research Council
- Abstract
Earthworms are an important soil taxon as ecosystem engineers, providing a variety of crucial ecosystem functions and services. Little is known about their diversity and distribution at large spatial scales, despite the availability of considerable amounts of local-scale data. Earthworm diversity data, obtained from the primary literature or provided directly by authors, were collated with information on site locations, including coordinates, habitat cover, and soil properties. Datasets were required, at a minimum, to include abundance or biomass of earthworms at a site. Where possible, site-level species lists were included, as well as the abundance and biomass of individual species and ecological groups. This global dataset contains 10,840 sites, with 184 species, from 60 countries and all continents except Antarctica. The data were obtained from 182 published articles, published between 1973 and 2017, and 17 unpublished datasets. Amalgamating data into a single global database will assist researchers in investigating and answering a wide variety of pressing questions, for example, jointly assessing aboveground and belowground biodiversity distributions and drivers of biodiversity change., H.R.P.P., B.K-R., and the sWorm workshops were supported by the sDiv [Synthesis Centre of the German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig (DFG FZT 118)]. H.R.P.P., O.F. and N.E. acknowledge funding by the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (grant agreement no. 677232 to NE). K.S.R. and W.H.v.d.P. were supported by ERC-ADV grant 323020 to W.H.v.d.P. Also supported by iDiv (DFG FZT118) Flexpool proposal 34600850 (C.A.G. and N.E.); the Academy of Finland (285882) and the Natural Sciences and Engineering Research Council of Canada (postdoctoral fellowship and RGPIN-2019-05758) (E.K.C.); German Federal Ministry of Education and Research (01LO0901A) (D.J.R.); ERC-AdG 694368 (M.R.); the TULIP Laboratory of Excellence (ANR-10-LABX-41) (M.L); and the BBSRC David Phillips Fellowship to F.T.d.V. (BB/L02456X/1). In addition, data collection was funded by the Russian Foundation for Basic Research (12-04-01538-а, 12-04-01734-a, 14-44-03666-r_center_a, 15-29-02724-ofi_m, 16-04-01878-a 19-05-00245, 19-04-00-609-a); Tarbiat Modares University; Aurora Organic Dairy; UGC(NERO) (F. 1-6/Acctt./NERO/2007-08/1485); Natural Sciences and Engineering Research Council (RGPIN-2017-05391); Slovak Research and Development Agency (APVV-0098-12); Science for Global Development through Wageningen University; Norman Borlaug LEAP Programme and International Atomic Energy Agency (IAEA); São Paulo Research Foundation - FAPESP (12/22510-8); Oklahoma Agricultural Experiment Station; INIA - Spanish Agency (SUM 2006-00012-00-0); Royal Canadian Geographical Society; Environmental Protection Agency (Ireland) (2005-S-LS-8); University of Hawai’i at Mānoa (HAW01127H; HAW01123M); European Union FP7 (FunDivEurope, 265171; ROUTES 265156); U.S. Department of the Navy, Commander Pacific Fleet (W9126G-13-2-0047); Science and Engineering Research Board (SB/SO/AS-030/2013) Department of Science and Technology, New Delhi, India; Strategic Environmental Research and Development Program (SERDP) of the U.S. Department of Defense (RC-1542); Maranhão State Research Foundation (FAPEMA 03135/13, 02471/17); Coordination for the Improvement of Higher Education Personnel (CAPES 3281/2013); Ministry of Education, Youth and Sports of the Czech Republic (LTT17033); Colorado Wheat Research Foundation; Zone Atelier Alpes, French National Research Agency (ANR-11-BSV7-020-01, ANR-09-STRA-02-01, ANR 06 BIODIV 009-01); Austrian Science Fund (P16027, T441); Landwirtschaftliche Rentenbank Frankfurt am Main; Welsh Government and the European Agricultural Fund for Rural Development (Project Ref. A AAB 62 03 qA731606); SÉPAQ, Ministry of Agriculture and Forestry of Finland; Science Foundation Ireland (EEB0061); University of Toronto (Faculty of Forestry); National Science and Engineering Research Council of Canada; Haliburton Forest & Wildlife Reserve; NKU College of Arts & Sciences Grant; Österreichische Forschungsförderungsgesellschaft (837393 and 837426); Mountain Agriculture Research Unit of the University of Innsbruck; Higher Education Commission of Pakistan; Kerala Forest Research Institute, Peechi, Kerala; UNEP/GEF/TSBF-CIAT Project on Conservation and Sustainable Management of Belowground Biodiversity; Ministry of Agriculture and Forestry of Finland; Complutense University of Madrid/European Union FP7 project BioBio (FPU UCM 613520); GRDC; AWI; LWRRDC; DRDC; CONICET (National Scientific and Technical Research Council) and FONCyT (National Agency of Scientific and Technological Promotion) (PICT, PAE, PIP), Universidad Nacional de Luján y FONCyT (PICT 2293 (2006)); Fonds de recherche sur la nature et les technologies du Québec (131894); Deutsche Forschungsgemeinschaft (SCHR1000/3-1, SCHR1000/6-1, 6-2 (FOR 1598), WO 670/7-1, WO 670/7-2, & SCHA 1719/1-2), CONACYT (FONDOS MIXTOS TABASCO/PROYECTO11316); NSF (DGE-0549245, DGE-0549245, DEB-BE-0909452, NSF1241932, LTER Program DEB-97–14835); Institute for Environmental Science and Policy at the University of Illinois at Chicago; Dean’s Scholar Program at UIC; Garden Club of America Zone VI Fellowship in Urban Forestry from the Casey Tree Endowment Fund; J.E. Weaver Competitive Grant from the Nebraska Chapter of The Nature Conservancy; The College of Liberal Arts and Sciences at Depaul University; Elmore Hadley Award for Research in Ecology and Evolution from the UIC Dept. of Biological Sciences, Spanish CICYT (AMB96-1161; REN2000-0783/GLO; REN2003-05553/GLO; REN2003-03989/GLO; CGL2007-60661/BOS); Yokohama National University; MEXT KAKENHI (25220104); Japan Society for the Promotion of Science KAKENHI (25281053, 17KT0074, 25252026); ADEME (0775C0035); Ministry of Science, Innovation and Universities of Spain (CGL2017-86926-P); Syngenta Philippines; UPSTREAM; LTSER (Val Mazia/Matschertal); Marie Sklodowska Curie Postdoctoral Fellowship (747607); National Science & Technology Base Resource Survey Project of China (2018FY100306); McKnight Foundation (14–168); Program of Fundamental Researches of Presidium of Russian Academy of Sciences (AААА-A18–118021490070–5); Brazilian National Council for Scientific and Technological Development (CNPq 310690/2017–0, 404191/2019–3, 307486/2013–3); French Ministry of Foreign and European Affairs; Bavarian Ministry for Food, Agriculture and Forestry (Project No B62); INRA AIDY project; MIUR PRIN 2008; Idaho Agricultural Experiment Station; Estonian Science Foundation; Ontario Ministry of the Environment, Canada; Russian Science Foundation (16-17-10284); National Natural Science Foundation of China (41371270); Australian Research Council (FT120100463); USDA Forest Service-IITF.
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- 2021
21. Quantifying the effects of species traits on predation risk in nature a comparative study of butterfly wing damage
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Toomas Tammaru, Robert B. Davis, Melissa R. L. Whitaker, Niklas Wahlberg, Juhan Javoiš, Ullasa Kodandaramaiah, James R. Carey, Erki Õunap, Freerk Molleman, Kwaku Aduse-Poku, Ants Kaasik, Andreas Prinzing, Indian Institute of Science Education and Research Pune (IISER Pune), University of Tartu, Adam Mickiewicz University in Poznań (UAM), Harvard University [Cambridge], Ecosystèmes, biodiversité, évolution [Rennes] (ECOBIO), Centre National de la Recherche Scientifique (CNRS)-Observatoire des Sciences de l'Univers de Rennes (OSUR)-Institut Ecologie et Environnement (INEE), Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université de Rennes 1 (UR1), Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES), Lund University [Lund], University of Cambridge [UK] (CAM), University of California, Centre National de la Recherche Scientifique. Grant Number: ATIP, Bixby International Travel Grant, Région Bretagne, European Regional Development Fund, Estonian Science Foundation. Grant Numbers: 9215, IUT20‐33, National Institute on Aging. Grant Numbers: PO1 AG022500‐01, PO1 AG608761‐10, Department of Science and Technology, Government of India. Grant Numbers: DST/I, NSPIRE/04/2013/000476, Harvard University, Université de Rennes (UR)-Institut Ecologie et Environnement (INEE), Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Observatoire des Sciences de l'Univers de Rennes (OSUR), Université de Rennes (UR)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Centre National de la Recherche Scientifique (CNRS), and University of California (UC)
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0106 biological sciences ,Male ,sex differences ,Species complex ,Zoology ,Biology ,010603 evolutionary biology ,01 natural sciences ,defensive ecology ,Predation ,flight speed ,symmetrical damage ,Animals ,Wings, Animal ,Predator ,Ecology, Evolution, Behavior and Systematics ,Wing ,010604 marine biology & hydrobiology ,activity ,Flight speed ,restricted maximum likelihood ,15. Life on land ,crypsis ,ageing ,Predatory Behavior ,Crypsis ,Butterfly ,Animal Science and Zoology ,Evolutionary ecology ,Female ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology ,Butterflies ,Locomotion - Abstract
International audience; Evading predators is a fundamental aspect of the ecology and evolution of all prey animals. In studying the influence of prey traits on predation risk, previous researchers have shown that crypsis reduces attack rates on resting prey, predation risk increases with increased prey activity, and rapid locomotion reduces attack rates and increases chances of surviving predator attacks. However, evidence for these conclusions is nearly always based on observations of selected species under artificial conditions. In nature, it remains unclear how defensive traits such as crypsis, activity levels, and speed influence realized predation risk across species in a community. Whereas direct observations of predator-prey interactions in nature are rare, insight can be gained by quantifying bodily damage caused by failed predator attacks. 2). We quantified how butterfly species traits affect predation risk in nature by determining how defensive traits correlate with wing damage caused by failed predation attempts, thereby providing the first robust multi-species comparative analysis of predator-induced bodily damage in wild animals. 3). For 34 species of fruit-feeding butterflies in an African forest, we recorded wing damage and quantified crypsis, activity levels, and flight speed. We then tested for correlations between damage parameters and species traits using comparative methods that account for measurement error. 4). We detected considerable differences in the extent, location, and symmetry of wing surface loss among species, with smaller differences between sexes. We found that males (but not females) of species that flew faster had substantially less wing surface loss. However, we found no correlation between cryptic colouration and symmetrical wing surface loss across species. In species in which males appeared to be more active than females, males had a lower proportion of symmetrical wing surface loss than females. 5). Our results provide evidence that activity greatly influences the probability of attacks and that flying rapidly is effective for escaping pursuing predators in the wild, but we did not find evidence that cryptic species are less likely to be attacked while at rest.
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- 2020
22. Large body size constrains dispersal assembly of communities even across short distances
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Bailey, Richard I., Molleman, Freerk, Vasseur, Chloe, Woas, Steffen, Prinzing, Andreas, Ecosystèmes, biodiversité, évolution [Rennes] (ECOBIO), Centre National de la Recherche Scientifique (CNRS)-Observatoire des Sciences de l'Univers de Rennes (OSUR)-Institut Ecologie et Environnement (INEE), Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université de Rennes 1 (UR1), Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES), Institute of Ecology and Earth Sciences, University of Tartu, University of Tartu, Indian Institute of Science Education and Research Pune (IISER Pune), Region Bretagne, Estonian Science Foundation [9215, IUT20-33], European Regional Development Fund (Centre of Excellence FIBIR), Region Bretagne (ACOMB), Region Bretagne (SAD), CNRS (ATIP grant), Government of India (INSPIRE Faculty Award) [DST/INSPIRE/04/2013/000476], Université de Rennes (UR)-Institut Ecologie et Environnement (INEE), Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Observatoire des Sciences de l'Univers de Rennes (OSUR), and Université de Rennes (UR)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Centre National de la Recherche Scientifique (CNRS)
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Mites ,Population Dynamics ,lcsh:R ,lcsh:Medicine ,Article ,Trees ,Species Specificity ,Animals ,Body Size ,lcsh:Q ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology ,lcsh:Science ,Ecosystem ,ComputingMilieux_MISCELLANEOUS - Abstract
Dispersal limitation has been considered to decrease with body size in animals and to be an important factor limiting community assembly on spatially isolated patches. Here we hypothesize that for flightless bark-dwelling oribatid mites dispersal limitation onto young trees might increase with body size (due to a decrease in aerial dispersal capacities), and it might occur even within a spatially contiguous forest canopy. We suppressed dispersal limitation towards branches from young trees by physically connecting them to branches from old trees and analyzed the impacts on community composition, accounting for branch microhabitat variables. Suppression of dispersal limitation increased community evenness and mean body size of mites on branches from young trees. Across all species, large species body-size corresponds to an abundance increase after suppression of dispersal limitation. Consistently, on no-contact control branches, mite body-sizes were larger on branches from old compared to young trees. Our study suggests that colonization/performance trade-offs might affect community assembly even across seemingly contiguous habitats. Overall, a previously underappreciated factor selecting against large body size in flightless canopy-dwelling invertebrates might be that large bodies makes these invertebrates fall faster and disperse less, not more.
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- 2018
23. Relative stability and proton transfer reactions of unsaturated isocyanides and cyanides
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Aiko Adamson, Peeter Burk, Jean-Claude Guillemin, Ivari Kaljurand, University of Tartu, Institut des Sciences Chimiques de Rennes (ISCR), Université de Rennes (UR)-Institut National des Sciences Appliquées - Rennes (INSA Rennes), Institut National des Sciences Appliquées (INSA)-Institut National des Sciences Appliquées (INSA)-Ecole Nationale Supérieure de Chimie de Rennes (ENSCR)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Grants No. 8809, 8689, Estonian Science Foundation, SF0180120s08, Estonian Ministry of Education and Research Targeted Financing, SLOKT117T, Enterprise Estonia foundation, Estonian Centre of Excellence HIGHTECHMAT, Integrated Exchange Program 'PARROT', French Ministry of Foreign Affairs, Centre National d'Etudes Spatiales (C.N.E.S.), Université de Rennes 1 (UR1), Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)-Institut National des Sciences Appliquées - Rennes (INSA Rennes), and Institut National des Sciences Appliquées (INSA)-Université de Rennes (UNIV-RENNES)-Institut National des Sciences Appliquées (INSA)-Ecole Nationale Supérieure de Chimie de Rennes (ENSCR)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS)
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chemistry.chemical_classification ,Hydrogen ,010405 organic chemistry ,Chemistry ,Cyanide ,Isocyanide ,Organic Chemistry ,Substituent ,chemistry.chemical_element ,Protonation ,010402 general chemistry ,Photochemistry ,01 natural sciences ,Medicinal chemistry ,0104 chemical sciences ,Gibbs free energy ,symbols.namesake ,chemistry.chemical_compound ,Deprotonation ,Hydrocarbon ,symbols ,[CHIM]Chemical Sciences ,Physical and Theoretical Chemistry - Abstract
The typical Gibbs free energy difference between hydrocarbon substituted isocyanides and the corresponding cyanides is 25 to 28 kcal/mol in favor of the cyanides and is mostly independent of the substituent. Triple bonded species with a ―C ≡ C―RN,C (RN,C = CN, NC) structure can be considered as exceptions. Because isocyanide and cyanide species have very similar structures, the relative energy is independent of the pressure and temperature conditions. Theoretical and experimental gas-phase investigations show that basicity of isocyanides ranges from 182.1 to 198.2 kcal/mol which is 14.0 to 19.7 kcal/mol higher than the basicity of respective cyanides. The most favored protonation centers are located on isocyanide or cyanide group depending on the species. The biggest increase of basicity was caused by bulkier substituents. The substitutions have greater influence on the basicity of cyanides than on the basicity of isocyanides. In regard to deprotonation, the cyanides are more acidic than the corresponding isocyanides. For most of the unsaturated cyanide and isocyanide species the (N,C)-CHR′ hydrogen (the one connected to the carbon next to cyanide/isocyanide group) is the most acidic. Our work suggests that for derivatives bearing unsaturated substituent the favored deprotonation center may be different and some cyanides and isocyanides are unstable towards gas-phase deprotonation equilibrium as the formed anion tends to isomerize. Copyright © 2016 John Wiley & Sons, Ltd.
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- 2016
24. Constructive effects of diversity in a multi-neuron model of the homeostatic regulation of the sleep–wake cycle
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Emilio Hernández-García, Raúl Toral, Marco Patriarca, Ministry of Education and Research (Estonia), European Commission, Ministerio de Economía y Competitividad (España), and Estonian Science Foundation
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Complex systems ,Computer science ,General Mathematics ,Applied Mathematics ,Complex system ,Neuronal dynamics ,General Physics and Astronomy ,Statistical and Nonlinear Physics ,Biological neuron model ,Network topology ,Wake–sleep cycle ,Constructive ,Orexin ,nervous system ,Diversity-induced resonance ,General level ,Circadian rhythm ,Emergent phenomenon ,Set (psychology) ,Neuroscience - Abstract
As an instance of diversity-induced resonance and of the constructive role of heterogeneity in complex systems, here we study a generalized version of a physiologically-motivated sleep-wake cycle model taking into account the role of orexin [Patriarca et al. (2012) [16]; Postnova et al. (2009) [9]]. With respect to the versions of the model studied previously, here we consider systems containing both a set of orexin neurons - responsible for the production of orexin - and a set of glutaminergic neurons - representing mental activity or sleep depending on their firing or silent state, respectively - within some basic network topologies. The neurons of one or both types are diversified and it is shown how the interplay between the heterogeneous constituent units produces as an emergent effect the recovering or improving of the sleep-wake cycle. At a general level, the results obtained suggest that also systems with a dynamics driven by a homeostatic mechanism, with a time scale much longer than that of the constituent excitable units, may present diversity-induced resonance., M.P. acknowledges support from the Estonian Science Foundation Grant no. 9462 and the Institutional Research Funding IUT (IUT39-1) of the Estonian Ministry of Education and Research. E.H-G. and R.T. acknowledge support from FEDER and MINECO (Spain) through the project INTENSE@COSYP (FIS2012-30634).
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- 2015
25. RGS16 Restricts the Pro-Inflammatory Response of Monocytes
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T. Tiivel, R. Saar, Viiu Paalme, S Rüütel Boudinot, Jaanus Suurväli, M. Pahtma, J.M. Cavaillon, A Nutt, M. Saaremäe, C. Fitting, Department of Gene Technology, Tallinn Technical University, Cytokines et Inflammation, Institut Pasteur [Paris] (IP), This work was supported by Estonian Science Foundation grant ETF8914, by the Competence Center of Cancer Research and by Estonian Research Council Targeted Financing Project no. SF0140066s09., and Institut Pasteur [Paris]
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Cell type ,[SDV]Life Sciences [q-bio] ,medicine.medical_treatment ,Interleukin-1beta ,Immunology ,Bone Marrow Cells ,Inflammation ,Biology ,Lymphocyte Activation ,Monocytes ,Cell Line ,Proinflammatory cytokine ,Lipopeptides ,Mice ,Heterotrimeric G protein ,medicine ,Animals ,Humans ,RNA, Small Interfering ,Mice, Knockout ,Interleukin-6 ,Tumor Necrosis Factor-alpha ,Macrophages ,Interleukin-8 ,General Medicine ,Toll-Like Receptor 2 ,Interleukin-10 ,Cell biology ,Mice, Inbred C57BL ,Interleukin 10 ,Cytokine ,[SDV.IMM]Life Sciences [q-bio]/Immunology ,RNA Interference ,Tumor necrosis factor alpha ,Inflammation/*immunology ,medicine.symptom ,Cell activation ,RGS Proteins - Abstract
International audience; Immune cells express powerful and harmful effectors that require tight regulation. Heterotrimeric G proteins are critical mediators in translating extracellular signals into cell responses, which need a fine-tuned regulation for the control of cell activation. Regulator of G-protein signalling 16 (RGS16) has been identified as a key factor of G protein-mediated activation in lymphocytes, modulating inflammatory and survival responses of various cell types. However, data about the expression of this regulatory protein in monocytes are scarce, and it has remained unclear whether activation and migration of these cells are regulated by RGS16. In this study, the impact of RGS16 on the production of inflammatory cytokines by activated human monocytes was investigated in vitro using the human promonocytic cell line THP-1 as a model. Gain and loss of function experiments showed that RGS16 overexpression reduces the expression of pro-inflammatory cytokines IL-1β, IL-6, IL-8 and TNFα, while RGS16 knockdown by RNAi upregulates IL-1β, IL-6 and TNFα but not IL-8. RGS16 knockdown was also shown to enhance Pam3-mediated induction of the anti-inflammatory cytokine IL-10. Our results indicate that RGS16 restricts the activation-induced pro-inflammatory profile in myeloid cells.
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- 2014
26. Genes Interacting with Occupational Exposures to Low Molecular Weight Agents and Irritants on Adult-Onset Asthma in Three European Studies
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Rava, Marta, Ahmed, Ismaïl, Kogevinas, Manolis, Le Moual, Nicole, Bouzigon, Emmanuelle, Curjuric, Ivan, Dizier, Marie-Hélène, Dumas, Orianne, Gonzalez, Juan, Imboden, Medea, Mehta, Amar, Tubert-Bitter, Pascale, Zock, Jan-Paul, Jarvis, Deborah, Probst-Hensch, Nicole, Demenais, Florence, Nadif, Rachel, Faraldo, Beatrice, Vieillissement et Maladies chroniques : approches épidémiologique et de santé publique (VIMA), Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Institut National de la Santé et de la Recherche Médicale (INSERM), Spanish National Cancer Research Center (CNIO), Biostatistique, Biomathématique, Pharmacoépidémiologie et Maladies Infectieuses (B2PHI), Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM), Center for Research in Environmental Epidemiology (CREAL), Universitat Pompeu Fabra [Barcelona] (UPF)-Catalunya ministerio de salud, Variabilité Génétique et Maladies Humaines, Institut Universitaire d'Hématologie (IUH), Université Paris Diderot - Paris 7 (UPD7)-Université Paris Diderot - Paris 7 (UPD7)-Institut National de la Santé et de la Recherche Médicale (INSERM), Epidemiology & Public Health [Basel, Switzerland], Swiss Tropical and Public Health Institute [Basel]-Medical School University of Basel, Department of Environmental Health [Boston, USA], Harvard School of Public Health, Centre for Research in Environmental Epidemiology (CREAL), Universitat Pompeu Fabra [Barcelona] (UPF), Respiratory Epidemiology and Public Health Group [London, U.K.], Imperial College London-National Heart and Lung Institute, U946, Fondation Jean Dausset/CEPH, Institut National de la Santé et de la Recherche Médicale (INSERM), The genotyping of all three studies was funded by the French National Agency of Research (ANR-PRSP 2009: IAGO), and by the European Commission (contract n° 018996) (GABRIEL) and the Wellcome Trust grant (WT 084703MA), both awarded to the GABRIEL consortium (a multidisciplinary study to identify the genetic and environmental causes of asthma in the European Community). EGEA: Research funded by the French Agency of health safety, environment and work (AFSSET, EST-09-15). SAPALDIA: The Swiss National Science Foundation (grants no 33CS30-148470/1, 33CSCO-134276/1, 33CSCO-108796, 324730_135673, 3247BO-104283, 3247BO-104288, 3247BO-104284, 3247-065896, 3100-059302, 3200-052720, 3200-042532, 4026-028099, PMPDP3_129021/1, PMPDP3_141671/1), the Federal Office for the Environment, the Federal Office of Public Health, the Federal Office of Roads and Transport, the canton's government of Aargau, Basel-Stadt, Basel-Land, Geneva, Luzern, Ticino, Valais, and Zürich, the Swiss Lung League, the canton's Lung League of Basel Stadt/ Basel Landschaft, Geneva, Ticino, Valais, Graubünden and Zurich, Stiftung ehemals Bündner Heilstätten, SUVA, Freiwillige Akademische Gesellschaft, UBS Wealth Foundation, Talecris Biotherapeutics GmbH, Abbott Diagnostics.ECRHS: The co-ordination of ECRHS II was supported by the European Commission, as part of their Quality of Life program. This work was also funded by the US National Institutes of Health (NIH grant 1R01HL062633) and the Carlos III Health Institute of the Spanish Ministry of Health and Consumption (FIS grant 01/3058). The following bodies funded the local studies in ECRHS II included in this paper: Albacete: Fondo de Investigaciones Santarias (FIS) (grant code: 97/0035-01, 99/0034-01 and 99/0034-02), Hospital Universitario de Albacete, Consejeria de Sanidad, Barcelona: SEPAR, Public Health Service (grant code: R01 HL62633-01), Fondo de Investigaciones Santarias (FIS) (grant code:97/0035-01, 99/0034-01 and 99/0034-02) CIRIT (grant code: 1999SGR 00241) Red Respira ISCII, Basel: Swiss National Science Foundation, Swiss Federal Office for Education & Science, Swiss National Accident Insurance Fund (SUVA), USC NIEHS Center grant 5P30 ES07048, Bergen: Norwegian Research Council, Norwegian Asthma & Allergy Association (NAAF), Glaxo Wellcome AS, Norway Research Fund, Erfurt: GSF-National Research Centre for Environment & Health, Deutsche Forschungsgemeinschaft (DFG) (grant code FR 1526/1-1), Galdakao: Basque Health Dept, Grenoble: Programme Hospitalier de Recherche Clinique-DRC de Grenoble 2000 no. 2610, Ministry of Health, Direction de la Recherche Clinique, Ministere de l'Emploi et de la Solidarite, Direction Generale de la Sante, CHU de Grenoble, Comite des Maladies Respiratoires de l’Isere, Hamburg: GSF-National Reasearch Centre for Environment & Health, Deutsche Forschungsgemeinschaft (DFG) (grant code MA 711/4-1), Ipswich and Norwich: Asthma UK (formerly known as National Asthma Campaign), Huelva: Fondo de Investigaciones Santarias (FIS) (grant code: 97/0035-01, 99/0034-01 and 99/0034-02), Oviedo: Fondo de Investigaciones Santarias (FIS) (grant code: 97/0035-01, 99/0034-01 and 99/0034-02), Paris: Ministere de l'Emploi et de la Solidarite, Direction Generale de la Sante, UCB-Pharma (France), Aventis (France), Glaxo France, Programme Hospitalier de Recherche Clinique-DRC de Grenoble 2000 no. 2610, Ministry of Health, Direction de la Recherche Clinique, CHU de Grenoble, Tartu: Estonian Science Foundation, Umeå: Swedish Heart Lung Foundation, Swedish Foundation for Health Care Sciences & Allergy Research, Swedish Asthma & Allergy Foundation, Swedish Cancer & Allergy Foundation, and Uppsala: Swedish Heart Lung Foundation, Swedish Foundation for Health Care Sciences & Allergy Research, Swedish Asthma & Allergy Foundation, Swedish Cancer & Allergy Foundation.
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[SDV] Life Sciences [q-bio] ,[SDV.SPEE] Life Sciences [q-bio]/Santé publique et épidémiologie ,[SDV]Life Sciences [q-bio] ,[SDV.SPEE]Life Sciences [q-bio]/Santé publique et épidémiologie - Abstract
International audience; BACKGROUND:The biological mechanisms by which cleaning products and disinfectants-an emerging risk factor-affect respiratory health remain incompletely evaluated. Studying genes by environment interactions (G × E) may help identify new genes related to adult-onset asthma.OBJECTIVES:We identified interactions between genetic polymorphisms of a large set of genes involved in the response to oxidative stress and occupational exposures to low molecular weight (LMW) agents or irritants on adult-onset asthma.METHODS:Our data came from three large European cohorts: Epidemiological Family-based Study of the Genetics and Environment of Asthma (EGEA), Swiss Cohort Study on Air Pollution and Lung and Heart Disease in Adults (SAPALDIA), and European Community Respiratory Health Survey in Adults (ECRHS). A candidate pathway-based strategy identified 163 genes involved in the response to oxidative stress and potentially related to exposures to LMW agents/irritants. Occupational exposures were evaluated using an asthma job-exposure matrix and job-specific questionnaires for cleaners and healthcare workers. Logistic regression models were used to detect G × E interactions, adjusted for age, sex, and population ancestry, in 2,599 adults (mean age, 47 years; 60% women, 36% exposed, 18% asthmatics). p-Values were corrected for multiple comparisons.RESULTS:Ever exposure to LMW agents/irritants was associated with current adult-onset asthma [OR = 1.28 (95% CI: 1.04, 1.58)]. Eight single nucleotide polymorphism (SNP) by exposure interactions at five loci were found at p < 0.005: PLA2G4A (rs932476, chromosome 1), near PLA2R1 (rs2667026, chromosome 2), near RELA (rs931127, rs7949980, chromosome 11), PRKD1 (rs1958980, rs11847351, rs1958987, chromosome 14), and PRKCA (rs6504453, chromosome 17). Results were consistent across the three studies and after accounting for smoking.CONCLUSIONS:Using a pathway-based selection process, we identified novel genes potentially involved in adult asthma by interaction with occupational exposure. These genes play a role in the NF-κB pathway, which is involved in inflammation. Citation: Rava M, Ahmed I, Kogevinas M, Le Moual N, Bouzigon E, Curjuric I, Dizier MH, Dumas O, Gonzalez JR, Imboden M, Mehta AJ, Tubert-Bitter P, Zock JP, Jarvis D, Probst-Hensch NM, Demenais F, Nadif R. 2017. Genes interacting with occupational exposures to low molecular weight agents and irritants on adult-onset asthma in three European studies. Environ Health Perspect 125:207-214; http://dx.doi.org/10.1289/EHP376.
- Published
- 2017
27. Genes Interacting with Occupational Exposures to Low Molecular Weight Agents and Irritants on Adult-Onset Asthma in Three European Studies
- Author
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Marie-Hélène Dizier, Rachel Nadif, Orianne Dumas, Amar J. Mehta, Ismaïl Ahmed, Jan-Paul Zock, Pascale Tubert-Bitter, Juan R. González, Medea Imboden, Emmanuelle Bouzigon, Ivan Curjuric, Deborah Jarvis, Florence Demenais, Marta Rava, Nicole Probst-Hensch, Nicole Le Moual, Manolis Kogevinas, Vieillissement et Maladies chroniques : approches épidémiologique et de santé publique (VIMA), Institut National de la Santé et de la Recherche Médicale (INSERM)-Université de Versailles Saint-Quentin-en-Yvelines (UVSQ), Spanish National Cancer Research Center (CNIO), Biostatistique, Biomathématique, Pharmacoépidémiologie et Maladies Infectieuses (B2PHI), Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Institut Pasteur [Paris]-Institut National de la Santé et de la Recherche Médicale (INSERM), Center for Research in Environmental Epidemiology (CREAL), Universitat Pompeu Fabra [Barcelona] (UPF)-Catalunya ministerio de salud, Variabilité Génétique et Maladies Humaines, Institut Universitaire d'Hématologie (IUH), Université Paris Diderot - Paris 7 (UPD7)-Université Paris Diderot - Paris 7 (UPD7)-Institut National de la Santé et de la Recherche Médicale (INSERM), Epidemiology & Public Health [Basel, Switzerland], Swiss Tropical and Public Health Institute [Basel]-Medical School University of Basel, Department of Environmental Health [Boston, USA], Harvard School of Public Health, Centre for Research in Environmental Epidemiology (CREAL), Universitat Pompeu Fabra [Barcelona] (UPF), Respiratory Epidemiology and Public Health Group [London, U.K.], National Heart and Lung Institute-Imperial College London, U946, Fondation Jean Dausset/CEPH, Institut National de la Santé et de la Recherche Médicale (INSERM), The genotyping of all three studies was funded by the French National Agency of Research (ANR-PRSP 2009: IAGO), and by the European Commission (contract n° 018996) (GABRIEL) and the Wellcome Trust grant (WT 084703MA), both awarded to the GABRIEL consortium (a multidisciplinary study to identify the genetic and environmental causes of asthma in the European Community). EGEA: Research funded by the French Agency of health safety, environment and work (AFSSET, EST-09-15). SAPALDIA: The Swiss National Science Foundation (grants no 33CS30-148470/1, 33CSCO-134276/1, 33CSCO-108796, 324730_135673, 3247BO-104283, 3247BO-104288, 3247BO-104284, 3247-065896, 3100-059302, 3200-052720, 3200-042532, 4026-028099, PMPDP3_129021/1, PMPDP3_141671/1), the Federal Office for the Environment, the Federal Office of Public Health, the Federal Office of Roads and Transport, the canton's government of Aargau, Basel-Stadt, Basel-Land, Geneva, Luzern, Ticino, Valais, and Zürich, the Swiss Lung League, the canton's Lung League of Basel Stadt/ Basel Landschaft, Geneva, Ticino, Valais, Graubünden and Zurich, Stiftung ehemals Bündner Heilstätten, SUVA, Freiwillige Akademische Gesellschaft, UBS Wealth Foundation, Talecris Biotherapeutics GmbH, Abbott Diagnostics.ECRHS: The co-ordination of ECRHS II was supported by the European Commission, as part of their Quality of Life program. This work was also funded by the US National Institutes of Health (NIH grant 1R01HL062633) and the Carlos III Health Institute of the Spanish Ministry of Health and Consumption (FIS grant 01/3058). The following bodies funded the local studies in ECRHS II included in this paper: Albacete: Fondo de Investigaciones Santarias (FIS) (grant code: 97/0035-01, 99/0034-01 and 99/0034-02), Hospital Universitario de Albacete, Consejeria de Sanidad, Barcelona: SEPAR, Public Health Service (grant code: R01 HL62633-01), Fondo de Investigaciones Santarias (FIS) (grant code:97/0035-01, 99/0034-01 and 99/0034-02) CIRIT (grant code: 1999SGR 00241) Red Respira ISCII, Basel: Swiss National Science Foundation, Swiss Federal Office for Education & Science, Swiss National Accident Insurance Fund (SUVA), USC NIEHS Center grant 5P30 ES07048, Bergen: Norwegian Research Council, Norwegian Asthma & Allergy Association (NAAF), Glaxo Wellcome AS, Norway Research Fund, Erfurt: GSF-National Research Centre for Environment & Health, Deutsche Forschungsgemeinschaft (DFG) (grant code FR 1526/1-1), Galdakao: Basque Health Dept, Grenoble: Programme Hospitalier de Recherche Clinique-DRC de Grenoble 2000 no. 2610, Ministry of Health, Direction de la Recherche Clinique, Ministere de l'Emploi et de la Solidarite, Direction Generale de la Sante, CHU de Grenoble, Comite des Maladies Respiratoires de l’Isere, Hamburg: GSF-National Reasearch Centre for Environment & Health, Deutsche Forschungsgemeinschaft (DFG) (grant code MA 711/4-1), Ipswich and Norwich: Asthma UK (formerly known as National Asthma Campaign), Huelva: Fondo de Investigaciones Santarias (FIS) (grant code: 97/0035-01, 99/0034-01 and 99/0034-02), Oviedo: Fondo de Investigaciones Santarias (FIS) (grant code: 97/0035-01, 99/0034-01 and 99/0034-02), Paris: Ministere de l'Emploi et de la Solidarite, Direction Generale de la Sante, UCB-Pharma (France), Aventis (France), Glaxo France, Programme Hospitalier de Recherche Clinique-DRC de Grenoble 2000 no. 2610, Ministry of Health, Direction de la Recherche Clinique, CHU de Grenoble, Tartu: Estonian Science Foundation, Umeå: Swedish Heart Lung Foundation, Swedish Foundation for Health Care Sciences & Allergy Research, Swedish Asthma & Allergy Foundation, Swedish Cancer & Allergy Foundation, Uppsala: Swedish Heart Lung Foundation, Swedish Foundation for Health Care Sciences & Allergy Research, Swedish Asthma & Allergy Foundation, Swedish Cancer & Allergy Foundation., French National Agency of Research (Francia), Unión Europea. Comisión Europea, Wellcome Trust, Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Institut National de la Santé et de la Recherche Médicale (INSERM), Université de Versailles Saint-Quentin-en-Yvelines (UVSQ)-Institut Pasteur [Paris] (IP)-Institut National de la Santé et de la Recherche Médicale (INSERM), and Imperial College London-National Heart and Lung Institute
- Subjects
Male ,Health, Toxicology and Mutagenesis ,[SDV]Life Sciences [q-bio] ,05 Environmental Sciences ,Toxicology ,0302 clinical medicine ,Adult onset asthma ,Medicine ,030212 general & internal medicine ,Lung function ,Public, Environmental & Occupational Health ,biology ,CLEANING PRODUCTS ,SWISS COHORT ,NF-kappa B ,Respiratory organs diseases ,11 Medical And Health Sciences ,Middle Aged ,Local study ,3. Good health ,ENVIRONMENT INTERACTION ,LUNG-FUNCTION ,Europe ,Occupational Diseases ,Irritants ,Female ,Life Sciences & Biomedicine ,Adult ,GENETICS ,Steering committee ,Physical activity ,Environmental Sciences & Ecology ,OBSTRUCTIVE PULMONARY-DISEASE ,Polymorphism, Single Nucleotide ,Malalties de l'aparell respiratori ,03 medical and health sciences ,Administrative support ,Occupational Exposure ,Cooperative group ,Humans ,GENOME-WIDE ASSOCIATION ,Asma ,Science & Technology ,business.industry ,Research ,Public Health, Environmental and Occupational Health ,AIR-POLLUTION ,biology.organism_classification ,Asthma ,Molecular Weight ,030228 respiratory system ,Pison ,EMERGING ROLES ,Particulate Matter ,[SDV.SPEE]Life Sciences [q-bio]/Santé publique et épidémiologie ,WORKPLACE ,business ,Humanities ,Environmental Sciences - Abstract
BACKGROUND: The biological mechanisms by which cleaning products and disinfectants-an emerging risk factor-affect respiratory health remain incompletely evaluated. Studying genes by environment interactions (G × E) may help identify new genes related to adult-onset asthma. OBJECTIVES: We identified interactions between genetic polymorphisms of a large set of genes involved in the response to oxidative stress and occupational exposures to low molecular weight (LMW) agents or irritants on adult-onset asthma. METHODS: Our data came from three large European cohorts: Epidemiological Family-based Study of the Genetics and Environment of Asthma (EGEA), Swiss Cohort Study on Air Pollution and Lung and Heart Disease in Adults (SAPALDIA), and European Community Respiratory Health Survey in Adults (ECRHS). A candidate pathway-based strategy identified 163 genes involved in the response to oxidative stress and potentially related to exposures to LMW agents/irritants. Occupational exposures were evaluated using an asthma job-exposure matrix and job-specific questionnaires for cleaners and healthcare workers. Logistic regression models were used to detect G × E interactions, adjusted for age, sex, and population ancestry, in 2,599 adults (mean age, 47 years; 60% women, 36% exposed, 18% asthmatics). p-Values were corrected for multiple comparisons. RESULTS: Ever exposure to LMW agents/irritants was associated with current adult-onset asthma [OR = 1.28 (95% CI: 1.04, 1.58)]. Eight single nucleotide polymorphism (SNP) by exposure interactions at five loci were found at p < 0.005: PLA2G4A (rs932476, chromosome 1), near PLA2R1 (rs2667026, chromosome 2), near RELA (rs931127, rs7949980, chromosome 11), PRKD1 (rs1958980, rs11847351, rs1958987, chromosome 14), and PRKCA (rs6504453, chromosome 17). Results were consistent across the three studies and after accounting for smoking. CONCLUSIONS: Using a pathway-based selection process, we identified novel genes potentially involved in adult asthma by interaction with occupational exposure. These genes play a role in the NF-κB pathway, which is involved in inflammation. Citation: Rava M, Ahmed I, Kogevinas M, Le Moual N, Bouzigon E, Curjuric I, Dizier MH, Dumas O, Gonzalez JR, Imboden M, Mehta AJ, Tubert-Bitter P, Zock JP, Jarvis D, Probst-Hensch NM, Demenais F, Nadif R. 2017. Genes interacting with occupational exposures to low molecular weight agents and irritants on adult-onset asthma in three European studies. Environ Health Perspect 125:207-214; http://dx.doi.org/10.1289/EHP376. We thank all study members and staff involved in data collections in each cohort: EGEA: We thank the Epidemiological Study on Genetics and Environment of Asthma (EGEA) cooperative group members as follows. Coordination: V. Siroux [epidemiology, principal investigator (PI) since 2013]; F. Demenais (genetics); I. Pin (clinical aspects); R. Nadif (biology); F. Kauffmann (PI 1992–2012). Respiratory epidemiology: Inserm U 700, Paris: M. Korobaeff (EGEA1), F. Neukirch (EGEA1); Inserm U 707, Paris: I. Annesi-Maesano (EGEA1–2); Inserm U1168 (ex-CESP/U 1018), Villejuif: F. Kauffmann, N. Le Moual, R. Nadif, M.P. Oryszczyn (EGEA1–2), R. Varraso; Inserm U 823, Grenoble: V. Siroux. Genetics: Inserm U 393, Paris: J. Feingold; Inserm U 946, Paris: E. Bouzigon, F. Demenais, M.H. Dizier; CNG, Evry: I. Gut (now CNAG, Barcelona, Spain), M. Lathrop (now McGill University, Montreal, Canada). Clinical centers: Grenoble: I. Pin, C. Pison; Lyon: D. Ecochard (EGEA1), F. Gormand, Y. Pacheco; Marseille: D. Charpin (EGEA1), D. Vervloet (EGEA1–2); Montpellier: J. Bousquet; Paris Cochin: A. Lockhart (EGEA1), R. Matran (now in Lille); Paris Necker: E. Paty (EGEA1–2), P. Scheinmann (EGEA1–2); Paris Trousseau: A. Grimfeld (EGEA1–2), J. Just. Data and quality management: Inserm ex-U155 (EGEA1): J. Hochez; Inserm U1168 (ex-CESP/U 1018), Villejuif: N. Le Moual; Inserm ex-U780: C. Ravault (EGEA1–2); Inserm ex-U794: N. Chateigner (EGEA1–2); Grenoble: J. Quentin-Ferran (EGEA1–2). SAPALDIA: We thank the team of the Swiss study on Air Pollution and Lung and Heart Diseases in Adults (SAPALDIA). Study directorate: N.M. Probst-Hensch (PI; e/g); T. Rochat (p), C. Schindler (s), N. Künzli (e/exp), J.M. Gaspoz (c). Scientific team: J.C. Barthélémy (c), W. Berger (g), R. Bettschart (p), A. Bircher (a), C. Brombach (n), P.O. Bridevaux (p), L. Burdet (p), D. Felber Dietrich (e), M. Frey (p), U. Frey (pd), M.W. Gerbase (p), D. Gold (e), E. de Groot (c), W. Karrer (p), F. Kronenberg (g), B. Martin (pa), A. Mehta (e), D. Miedinger (o), M. Pons (p), F. Roche (c), T. Rothe (p), P. Schmid- Grendelmeyer (a), D. Stolz (p), A. Schmidt-Trucksäss (pa), J. Schwartz (e), A. Turk (p), A. von Eckardstein (cc), E. Zemp Stutz (e). Scientific team at coordinating centers: M. Adam (e), I. Aguilera (exp), S. Brunner (s), D. Carballo (c), S. Caviezel (pa), I. Curjuric (e), A. Di Pascale (s), J. Dratva (e), R. Ducret (s), E. Dupuis Lozeron (s), M. Eeftens (exp), I. Eze (e), E. Fischer (g), M. Foraster (e), M. Germond (s), L. Grize (s), S. Hansen (e), A. Hensel (s), M. Imboden (g), A. Ineichen (exp), A. Jeong (g), D. Keidel (s), A. Kumar (g), N. Maire (s), A. Mehta (e), R. Meier (exp), E. Schaffner (s), T. Schikowski (e), M. Tsai (exp). Abbreviations: (a) allergology, (c) cardiology, (cc) clinical chemistry, (e) epide - miology, (exp) exposure, (g) genetic and molecular biology, (m) meteorology, (n) nutrition, (o) occupational health, (p) pneumology, (pa) physical activity, (pd) pediatrics, (s) statistics. The study could not have been done without the help of the study partici - pants, technical and administrative support and the medical teams and field workers at the local study sites. Local fieldworkers: Aarau: S. Brun, G. Giger, M. Sperisen, M. Stahel; Basel: C. Bürli, C. Dahler, N. Oertli, I. Harreh, F. Karrer, G. Novicic, N. Wyttenbacher; Davos: A. Saner, P. Senn, R. Winzeler; Geneva: F. Bonfils, B. Blicharz, C. Landolt, J. Rochat; Lugano: S. Boccia, E. Gehrig, M.T. Mandia, G. Solari, B. Viscardi; Montana: A.P. Bieri, C. Darioly, M. Maire; Payerne: F. Ding, P. Danieli, A. Vonnez; Wald: D. Bodmer, E. Hochs, R. Kunz, C. Meier, J. Rakic, U. Schafroth, A. Walder. Administrative staff: N. Bauer Ott, C. Gabriel, R. Gutknecht. ECRHS: The ECRHS data incorporated in this analysis would not have been available without the collaboration of the following individuals and their research teams. ECRHS Co-ordinating Centre. P. Burney, D. Jarvis, S. Chinn, J. Knox (ECRHS II), C. Luczynska†, J. Potts. Steering Committee for ECRHS II. P. Burney, D. Jarvis, S. Chinn, U. Ackermann-Liebrich, J.M. Anto, I. Cerveri, R. deMarco†, T. Gislason, J. Heinrich, C. Janson, N. Kunzli, B. Leynaert, F. Neukirch, J. Schouten, J. Sunyer; C. Svanes, P. Vermeire†, M. Wjst. Principal Investigators and Senior Scientific Teams for ECRHS II centers within this analysis: Estonia: Tartu (R. Jogi, A. Soon); France: Paris (F. Neukirch, B. Leynaert, R. Liard, M. Zureik), Grenoble (I. Pin, J. Ferran-Quentin); Germany: Erfurt (J. Heinrich, M. Wjst, C. Frye, I. Meyer), Hamburg (K. Richter, D. Nowak); Norway: Bergen (A. Gulsvik, E. Omenaas, C. Svanes, B. Laerum); Spain: Barcelona (J.M. Anto, J. Sunyer, M. Kogevinas, J.P. Zock, X. Basagana, A. Jaen, F. Burgos), Huelva (J. Maldonado, A. Pereira, J.L. Sanchez), Albacete (J. Martinez-Moratalla Rovira, E. Almar), Galdakao (N. Muniozguren, I. Urritia), Oviedo (F. Payo); Sweden: Uppsala (C. Janson, G. Boman, D. Norback, M. Gunnbjornsdottir), Umeå (E. Norrman, M. Soderberg, K. Franklin, B. Lundback, B. Forsberg, L. Nystrom); Switzerland: Basel (N. Kunzli, B. Dibbert, M. Hazenkamp, M. Brutsche, U. Ackermann-Liebrich); United Kingdom: Norwich (D. Jarvis, B. Harrison), Ipswich (D. Jarvis, R. Hall, D. Seaton). Sí
- Published
- 2016
28. PRECATACLYSMIC VARIABLES: OBSERVATIONAL DATA AND MODELS
- Author
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Pustylnik, I. B., Pustynski, V. F., and Estonian Science Foundation for a supporting grant ETF 2629.
- Subjects
lcsh:QB1-991 ,lcsh:Astronomy ,Planetary nebulae ,precataclismic binaries - Abstract
We summarize the first results of modelling light curves of precataclysmic binaries with strong reflection effect. Our approach is based upon modified Napier’s technique and explicit computation of emergent radiation intensity using the source functions given by Strittmatter and Sobieski.
- Published
- 2017
29. Phylogenetic patterns are not proxies of community assembly mechanisms (they are far better)
- Author
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Igor V. Bartish, Pille Gerhold, James F. Cahill, Andreas Prinzing, Marten Winter, Institute of Ecology and Earth Sciences, University of Tartu, University of Tartu, University of Alberta, German Centre for Integrative Biodiversity Research (iDiv), Institute of Botany of the Czech Academy of Sciences (IB / CAS), Czech Academy of Sciences [Prague] (CAS), Ecosystèmes, biodiversité, évolution [Rennes] (ECOBIO), Université de Rennes (UR)-Institut Ecologie et Environnement (INEE), Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Observatoire des Sciences de l'Univers de Rennes (OSUR), Université de Rennes (UR)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Institut national des sciences de l'Univers (INSU - CNRS)-Université de Rennes 2 (UR2)-Centre National de la Recherche Scientifique (CNRS)-Institut National de Recherche pour l’Agriculture, l’Alimentation et l’Environnement (INRAE)-Centre National de la Recherche Scientifique (CNRS), European Regional Development Fund (Center of Excellence FIBIR, P Gerhold), Estonian Science Foundation (grant 8613, P Gerhold), a NSERC Discovery Grant (JF Cahill), German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig from the German Science Foundation (DFGFZT 118, M Winter), and Purkyne Fellowship from Academy of Sciences of Czech Republic (IV Bartish)., Biological Sciences, University of Alberta, German Centre for Integrative Biodiversity Research, Centre National de la Recherche Scientifique (CNRS)-Observatoire des Sciences de l'Univers de Rennes (OSUR)-Institut Ecologie et Environnement (INEE), Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Université de Rennes 1 (UR1), and Université de Rennes (UNIV-RENNES)-Université de Rennes (UNIV-RENNES)
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Macroevolutionary diversification ,Evolution ,Macroevolution ,Biology ,phylogeny ,Habitat filtering ,Phylogenetics ,evolution ,Inter-actions ,functional traits ,Ecology, Evolution, Behavior and Systematics ,Phylogeny ,Abiotic component ,Lineage-pool ,Functional ecology ,Phylogenetic tree ,Competition ,Ecology ,coexistence ,habitat filtering ,15. Life on land ,interactions ,macroevolutionary diversification ,Habitat ,Phylogenetic Pattern ,Trait ,Unit beheer Alterra ,lineage-pool ,[SDE.BE]Environmental Sciences/Biodiversity and Ecology ,competition ,Coexistence ,Functional traits - Abstract
International audience; 1. The subdiscipline of ‘community phylogenetics’ is rapidly growing and influencing thinking regarding community assembly. In particular, phylogenetic dispersion of co-occurring species within a community is commonly used as a proxy to identify which community assembly processes may have structured a particular community: phylogenetic clustering as a proxy for abiotic assembly, that is habitat filtering, and phylogenetic overdispersion as a proxy for biotic assembly, notably competition.2. We challenge this approach by highlighting (typically) implicit assumptions that are, in reality, only weakly supported, including (i) phylogenetic dispersion reflects trait dispersion; (ii) a given ecological function can be performed only by a single trait state or combination of trait states; (iii)trait similarity causes enhanced competition; (iv) competition causes species exclusion; (v) communities are at equilibrium with processes of assembly having been completed; (vi) assembly through habitat filtering decreases in importance if assembly through competition increases, such that the relative balance of the two can be thus quantified by a single parameter; and (vii) observed phylogenetic dispersion is driven predominantly by local and present-day processes.3. Moreover, technical sophistication of the phylogenetic-patterns-as-proxy approach trades off against sophistication in alternative, potentially more pertinent approaches to directly observe or manipulate assembly processes.4. Despite concerns about using phylogenetic dispersion as a proxy for community assembly processes, we suggest there are underappreciated benefits of quantifying the phylogenetic structure of communities, including (i) understanding how coexistence leads to the macroevolutionary diversification of habitat lineage-pools (i.e. phylogenetic-patterns-as-result approach); and (ii) understanding the macroevolutionary contingency of habitat lineage-pools and how it affects present-day species coexistence in local communities (i.e. phylogeneticpatterns- as-cause approach).5. We conclude that phylogenetic patterns may be little useful as proxy of community assembly. However, such patterns can prove useful to identify and test novel hypotheses on (i) how local coexistence may control macroevolution of the habitat lineage-pool, for example through competition among close relatives triggering displacement and diversification of characters, and (ii) how macroevolution within the habitat lineage-pool may control local coexistence of related species, for example through origin of close relatives that can potentially enter in competition.
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- 2015
30. A new fossil bristle worm (Annelida: Polychaeta: Aphroditiformia) from the late Cretaceous of tropical America
- Author
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Javier Luque, Olev Vinn, Stéphane Hourdez, Departament de Fisicoquímica and Institut de Biomedicina, Universitat de Barcelona (UB), Adaptation et Biologie des Invertébrés en Conditions Extrêmes (ABICE), Adaptation et diversité en milieu marin (AD2M), Station biologique de Roscoff [Roscoff] (SBR), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS)-Station biologique de Roscoff [Roscoff] (SBR), Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Université Pierre et Marie Curie - Paris 6 (UPMC)-Centre National de la Recherche Scientifique (CNRS)-Centre National de la Recherche Scientifique (CNRS), Institute of Geology, University of Tartu, Smithsonian Tropical Research Institute, Sepkoski Grant (Paleontological Society), Estonian Science Foundation grant [ETF9064], Palaeontological Association Research Grant, Estonian Research Council grant [IUT20-34], Estonian Ministry of Education and Science [SF0180051s08], Natural Science and Engineering Research Council of Canada Postgraduate Scholarship (NSERC CGS-D, Canada), and NSERC Canada discovery grant [A7245]
- Subjects
Polychaete ,Fossil Record ,biology ,Ecology ,[SDV]Life Sciences [q-bio] ,Paleontology ,biology.organism_classification ,Bristle ,Cretaceous ,Genus ,[SDE]Environmental Sciences ,Mesozoic ,Global biodiversity - Abstract
A new species of aphroditiform polychaete, Protopholoe colombiana, is described from the Coniacian of Colombia, South America, increasing the number of species of this genus known from the fossil record to two. This is the first occurrence of fossil soft-bodied polychaetes in the Tropical Americas, and indicates that aphroditiforms were spread worldwide during the Mesozoic.
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- 2015
31. Spatial patterns of competing random walkers
- Author
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Emilio Hernández-García, Cristóbal López, Els Heinsalu, Ministerio de Economía y Competitividad (España), European Commission, and Estonian Science Foundation
- Subjects
Lévy flights ,Individual-based model ,Gaussian ,FOS: Physical sciences ,Pattern Formation and Solitons (nlin.PS) ,Niche space ,Clustering ,symbols.namesake ,Statistical physics ,Quantitative Biology - Populations and Evolution ,Cluster analysis ,Condensed Matter - Statistical Mechanics ,Ecology, Evolution, Behavior and Systematics ,Brownian motion ,Mathematics ,Statistical Mechanics (cond-mat.stat-mech) ,Competition ,Ecological Modeling ,Populations and Evolution (q-bio.PE) ,Random walk ,Nonlinear Sciences - Pattern Formation and Solitons ,Outcome (probability) ,Birth–death process ,Lévy flight ,FOS: Biological sciences ,Spatial ecology ,symbols ,Pattern formation ,Nonlocal interactions ,Random walks - Abstract
© 2014 Elsevier B.V. We review recent results obtained from simple individual-based models of biological competition in which birth and death rates of an organism depend on the presence of other competing organisms close to it. In addition the individuals perform random walks of different types (Gaussian diffusion and Lévy flights). We focus on how competition and random motions affect each other, from which spatial instabilities and extinctions arise. Under suitable conditions, competitive interactions lead to clustering of individuals and periodic pattern formation. Random motion has a homogenizing effect and then delays this clustering instability. When individuals from species differing in their random walk characteristics are allowed to compete together, the ones with a tendency to form narrower clusters get a competitive advantage over the others. Mean-field deterministic equations are analyzed and compared with the outcome of the individual-based simulations., E.H.-G. and C.L. acknowledge financial support from Spanish MINECO and FEDER through projects INTENSE@COSYP (FIS2012-30634) and ESCOLA (CTM2012-39025-C02-01). E.H. acknowledges support from the targeted financing project SF0690030s09, and from the Estonian Science Foundation Grant No. 9462.
- Published
- 2015
32. Analysis of Individual Tree Competition on Diameter Growth of Silver Birch in Estonia
- Author
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Henn Korjus, Kobra Maleki, Andres Kiviste, and The Institutional Research Funding IUT21-04 (B21004MIMK) and Estonian Science Foundation Grant ETF8890
- Subjects
Betula pendula Roth ,Competition level ,stem diameter increment ,Ecology ,media_common.quotation_subject ,Soil Science ,Forestry ,Growth model ,zone of influence ,Competition (biology) ,Competition indices ,Tree (data structure) ,Ranking ,Statistics ,lcsh:SD1-669.5 ,Predictor variable ,Selection method ,lcsh:Forestry ,Ecology, Evolution, Behavior and Systematics ,Selection (genetic algorithm) ,media_common ,Mathematics - Abstract
Aim of study: The present study evaluates a set of competition indices including spatially explicit indices combined with different competitor selection approaches and non-spatially explicit competition indices. The aim was to quantify and describe the neighbouring effects on the tree diameter growth of silver birch trees.Area of study: Region throughout Estonia. Material and methods: Data from the Estonian Network of Forest Research Plots was used. After quantifying the selected indices, the best non-spatial indices and spatial indices (combined with neighbour selection methods) were separately devised into a growth model as a predictor variable to assess the ability of the diameter growth model before and after adding competition measures. To test the species-specific effect on the competition level, the superior indices were recalculated using Ellenberg’s light indicators and incorporated into the diameter growth model. Main results: Statistical analyses showed that the diameter growth is a function of neighbourhood interactions and spatial indices were better growth predictors than non-spatial indices. In addition, the best selections of competitive neighbours were acquired based on the influence zone and the competition elimination angle concepts, and using Ellenberg’s light values had no significant improvement in quantifying the competition effects. Research highlights: Although the best ranking spatial competition measures were superior to the best non-spatial indices, the differences were negligible.Keywords: Competition indices; zone of influence; stem diameter increment; Betula pendula Roth.
- Published
- 2015
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