9 results on '"Desideri N"'
Search Results
2. A combined in silico / in vitro approach unveils common molecular requirements for efficient BVDV RdRp binding of linear aromatic N-polycyclic systems
- Author
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Carta, A., primary, Briguglio, I., additional, Piras, S., additional, Corona, P., additional, Ibba, R., additional, Laurini, E., additional, Fermeglia, M., additional, Pricl, S., additional, Desideri, N., additional, Atzori, E.M., additional, La Colla, P., additional, Collu, G., additional, Delogu, I., additional, and Loddo, R., additional
- Published
- 2016
- Full Text
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3. A combined in silico/in vitro approach unveils common molecular requirements for efficient BVDV RdRp binding of linear aromatic N-polycyclic systems
- Author
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Paola Corona, Gabriella Collu, R. Loddo, Antonio Carta, Irene Briguglio, Elena Maria Atzori, Maurizio Fermeglia, Sabrina Pricl, P. La Colla, Roberta Ibba, Erik Laurini, Nicoletta Desideri, Ilenia Delogu, Sandra Piras, Carta, A., Briguglio, I., Piras, S., Corona, P., Ibba, R., Laurini, Erik, Fermeglia, Maurizio, Pricl, Sabrina, Desideri, N., Atzori, E. M., La Colla, P., Collu, G., Delogu, I., and Loddo, R.
- Subjects
Models, Molecular ,Stereochemistry ,viruses ,In silico ,enzymatic activity ,RNA-dependent RNA polymerase ,Plasma protein binding ,010402 general chemistry ,01 natural sciences ,Antiviral Agents ,chemistry.chemical_compound ,Bovine viral diarrhea virus ,Rna dependent Rna Polymerase ,antiviral drug design and development ,computer-assisted drug design ,protein expression ,Drug Discovery ,Animals ,bovine viral diarrhea virus (BVDV) ,RNA-dependent RNA polymerase (RdRp) inhibitors ,Imidazo[4,5-g]quinoline ,pyrido[2,3-g]quinoxaline ,aromatic N-polycyclic systems ,Binding site ,Polycyclic Aromatic Hydrocarbons ,NS5B ,Polymerase ,Pharmacology ,Bovine viral diarrhea viru ,Binding Sites ,Diarrhea Viruses, Bovine Viral ,biology ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,Hydrogen Bonding ,General Medicine ,RNA-Dependent RNA Polymerase ,0104 chemical sciences ,Biochemistry ,Docking (molecular) ,biology.protein ,Bovine Virus Diarrhea-Mucosal Disease ,Cattle ,Pharmacophore - Abstract
In this work, we present and discuss a comprehensive set of both newly and previously synthesized compounds belonging to 5 distinct molecular classes of linear aromatic N-polycyclic systems that efficiently inhibits bovine viral diarrhea virus (BVDV) infection. A coupled in silico/in vitro investigation was employed to formulate a molecular rationale explaining the notable affinity of all molecules to BVDV RNA dependent RNA polymerase (RdRp) NS5B. We initially developed a three-dimensional common-feature pharmacophore model according to which two hydrogen bond acceptors and one hydrophobic aromatic feature are shared by all molecular series in binding the viral polymerase. The pharmacophoric information was used to retrieve a putative binding site on the surface of the BVDV RdRp and to guide compound docking within the protein binding site. The affinity of all compounds towards the enzyme was scored via molecular dynamics-based simulations, showing high correlation with in vitro EC50 data. The determination of the interaction spectra of the protein residues involved in inhibitor binding highlighted amino acids R295 and Y674 as the two fundamental H-bond donors, while two hydrophobic cavities HC1 (residues A221, I261, I287, and Y289) and HC2 (residues V216, Y303, V306, K307, P408, and A412) fulfill the third pharmacophoric requirement. Three RdRp (K263, R295 and Y674) residues critical for drug binding were selected and mutagenized, both in silico and in vitro, into alanine, and the affinity of a set of selected compounds towards the mutant RdRp isoforms was determined accordingly. The agreement between predicted and experimental data confirmed the proposed common molecular rationale shared by molecules characterized by different chemical scaffolds in binding to the BVDV RdRp, ultimately yielding compound 6b (EC50 = 0.3 μM; IC50 = 0.48 μM) as a new, potent inhibitor of this Pestivirus.
- Published
- 2016
4. Novel Pyrazole-Containing Compounds Active against Mycobacterium tuberculosis .
- Author
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Poce G, Consalvi S, Venditti G, Alfonso S, Desideri N, Fernandez-Menendez R, Bates RH, Ballell L, Barros Aguirre D, Rullas J, De Logu A, Gardner M, Ioerger TR, Rubin EJ, and Biava M
- Abstract
In this study, a series of 49 five-membered heterocyclic compounds containing either a pyridine- or a pyrrole-type nitrogen were synthesized and tested against Mycobacterium tuberculosis . Among them, only the 1,3,5-trisubstituted pyrazoles 5 - 49 exhibited minimum inhibitory concentration values in the low micromolar range, and some also exhibited an improved physicochemical profile without cytotoxic effects. Three pyrazoles were subjected to an animal tuberculosis efficacy model, and compound 6 induced a statistically significant difference in lung bacterial counts compared with untreated mice. Moreover, to determine the target of this series, resistors were generated, and whole genome sequencing revealed mutations in the mmpL3 gene., Competing Interests: The authors declare no competing financial interest., (Copyright © 2019 American Chemical Society.)
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- 2019
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5. Design, Synthesis, Antiviral Evaluation, and SAR Studies of New 1-(Phenylsulfonyl)-1 H -Pyrazol-4-yl-Methylaniline Derivatives.
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Desideri N, Fioravanti R, Proietti Monaco L, Atzori EM, Carta A, Delogu I, Collu G, and Loddo R
- Abstract
A series of N -((3-phenyl-1-(phenylsulfonyl)-1 H -pyrazol-4-yl)methyl)anilines 7a-p and 8a-l , structurally related to previously synthesized and tested ( N -(1,3-diphenyl-1 H -pyrazol-4-yl)methyl)anilines ( 1a-v ), were designed and synthesized. The new derivatives were evaluated in cell-based assays for their cytotoxicity and antiviral activity against a large panel of RNA and DNA viruses of public health significance. Generally, the tested compounds did not display cytotoxicity toward the cell lines used. The majority of derivatives 7a - p were able to interfered with YFV and RSV replication in the micromolar range showing a marked improvement in potency and selectivity with respect to the reference inhibitors 6-azauridine and ribavirin, respectively. The introduction of a p -methoxy substituent on the phenylsulfonyl group (compounds 8a-l ) completely abolished the anti-RSV activity and reduced or eliminated the potency against YFV. On the contrary, several p -methoxy analogs were able to interfere with BVDV replication with a comparable ( 8b, 8c, 8g , and 8k ) or better ( 8a and 8f ) potency than the reference inhibitor, ribavirin. Compound 7e , selected for time of addition experiments on BHK-21 cell cultures infected with YFV, achieved the highest reduction of virus titer when added 2 h post infection and maintained up to 4 h post infection.
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- 2019
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6. Inhibitors of Yellow Fever Virus replication based on 1,3,5-triphenyl-4,5-dihydropyrazole scaffold: Design, synthesis and antiviral evaluation.
- Author
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Fioravanti R, Desideri N, Carta A, Atzori EM, Delogu I, Collu G, and Loddo R
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- Animals, Antiviral Agents chemical synthesis, Antiviral Agents chemistry, Cattle, Cell Line, Cell Survival drug effects, Cricetinae, Dose-Response Relationship, Drug, Haplorhini, Microbial Sensitivity Tests, Molecular Structure, Pyrazoles chemical synthesis, Pyrazoles chemistry, Structure-Activity Relationship, Virus Replication drug effects, Antiviral Agents pharmacology, Drug Design, Pyrazoles pharmacology, Yellow fever virus drug effects
- Abstract
By the antiviral screening of an in house library of pyrazoline compounds, 4-(3-(4-phenoxyphenyl)-5-phenyl-4,5-dihydro-1H-pyrazol-1-yl)benzenesulfonamide (5a) was identified as a promising hit compound for the development of anti- Yellow Fever Virus (YFV) agents. Structural optimization studies were focused on the development of 5a analogues which retain the potency as YFV inhibitors and show a reduced cytotoxicity. The synthesized 1-3,5-triphenyl-pyrazolines (4a-j, 5a-j, 6a-j) were evaluated in cell based assays for cytotoxicity and antiviral activity against representative viruses of two of the three genera of the Flaviviridae family, i.e.: Pestivirus (BVDV) and Flavivirus (YFV). These compounds were also tested against a large panel of different pathogenic RNA and DNA viruses. Most of the new 1-3,5-triphenyl-pyrazolines (4a-j, 5a-j, 6a-j) exhibited a specific activity against YFV, showing EC
50 values in the low micromolar range with almost a 10-fold improvement in potency compared to the reference inhibitor 6-azauridine. However, the selectivity indexes of the unsubstituted (4a-j) and the phenoxy (5a-j) analogues were generally modest due to the pronounced cytotoxicity against BHK-21 cells. Otherwise, the benzyloxy derivatives (6a-j) generally coupled high potency and selectivity. On the basis of both anti-YFV activity and selectivity index, pyrazolines 6a and 6b were chosen for time of addition experiments. The selected pyrazolines and the reference inhibitor 6-azauridine displayed maximal inhibition when added in the pretreatment or during the infection., (Copyright © 2017 Elsevier Masson SAS. All rights reserved.)- Published
- 2017
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7. 3-Phenylalkyl-2H-chromenes and -chromans as novel rhinovirus infection inhibitors.
- Author
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Conti C, Proietti Monaco L, and Desideri N
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- Antiviral Agents chemistry, Benzopyrans chemistry, Carbon-13 Magnetic Resonance Spectroscopy, HeLa Cells, Humans, Microbial Sensitivity Tests, Proton Magnetic Resonance Spectroscopy, Spectrophotometry, Infrared, Structure-Activity Relationship, Antiviral Agents pharmacology, Benzopyrans pharmacology, Rhinovirus drug effects
- Abstract
Following our studies on structure-activity relationships of anti-rhinovirus chromene and chroman derivatives, we designed and synthesized new series of 3-phenylalkyl-2H-chromenes and -chromans bearing differently sized, aliphatic linker chains between the two cycles. The cytotoxicity and the antiviral activity of the new compounds on human rhinovirus (HRV) serotype 1B and 14 infection were evaluated in HeLa cell cultures. Most of the tested compounds interfered with HRV1B multiplication in the micromolar or submicromolar concentrations while HRV14 was less susceptible. 3-[3-(4-Chlorophenyl)propyl]chroman (9c) was selected for preliminary mechanism of action studies due to its potent activity against both serotypes (IC
50 of 0.48μM and 1.36μM towards HRV1B and 14, respectively) coupled with high selectivity (SI=206.18 and 73.26, respectively). Results of time of addition/removal studies suggest that 9c, similarly to related derivatives, behaves as a capsid binder interfering with some early events of the HRV1B infectious cycle., (Copyright © 2017 Elsevier Ltd. All rights reserved.)- Published
- 2017
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8. (E)-3-Heteroarylidenechroman-4-ones as potent and selective monoamine oxidase-B inhibitors.
- Author
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Desideri N, Proietti Monaco L, Fioravanti R, Biava M, Yáñez M, Alcaro S, and Ortuso F
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- Chromans pharmacology, Humans, Hydrogen Bonding, Inhibitory Concentration 50, Models, Molecular, Monoamine Oxidase drug effects, Monoamine Oxidase Inhibitors pharmacology, Sensitivity and Specificity, Solvents pharmacology, Structure-Activity Relationship, Chromans chemistry, Monoamine Oxidase Inhibitors chemistry
- Abstract
A series of (E)-3-heteroarylidenechroman-4-ones (1a-r) was designed, synthesized and investigated in vitro for their ability to inhibit the enzymatic activity of both human monoamine oxidase (hMAO) isoforms, hMAO-A and hMAO-B. All the compounds were found to be selective hMAO-B inhibitors showing IC50 values in the nanomolar or micromolar range. (E)-5,7-Dichloro-3-{[(2-(dimethylamino)pyrimidin-5-yl]methylene}chroman-4-one (1c) was the most interesting compound identified in this study, endowed with higher hMAO-B potency (IC50 = 10.58 nM) and selectivity (SI > 9452) with respect to the reference selective inhibitor selegiline (IC50 = 19.60 nM, IC50 > 3431). Molecular modelling studies were performed for rationalizing at molecular level the target selective inhibition of our compounds, revealing a remarkable contribution of hydrogen bond network and water solvent., (Copyright © 2016 Elsevier Masson SAS. All rights reserved.)
- Published
- 2016
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9. N-((1,3-Diphenyl-1H-pyrazol-4-yl)methyl)anilines: A novel class of anti-RSV agents.
- Author
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Fioravanti R, Desideri N, Biava M, Droghini P, Atzori EM, Ibba C, Collu G, Sanna G, Delogu I, and Loddo R
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- Antiviral Agents chemical synthesis, Antiviral Agents chemistry, Cell Line, Humans, Virus Replication drug effects, Aniline Compounds chemistry, Antiviral Agents pharmacology, Pyrazoles chemistry, Respiratory Syncytial Viruses drug effects
- Abstract
A series of N-((1,3-diphenyl-1H-pyrazol-4-yl)methyl)anilines were synthesized and evaluated in vitro for cytotoxicity and antiviral activity against a large panel of viruses. Most of the tested compounds interfered with RSV replication in the micromolar concentrations (EC50s ranging from 5 μM to 28 μM). SAR studies suggested that the presence of a trifluoromethyl group in R(1) abolished the anti-RSV activity and enhanced the cytotoxicity while the best results in term of both anti-RSV activity and selectivity were obtained by the introduction in R(1) of a chlorine or a bromine atom., (Copyright © 2015 Elsevier Ltd. All rights reserved.)
- Published
- 2015
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