117 results on '"Barber I"'
Search Results
2. Extrathoracic manifestations of COVID-19 in adults and presentation of the disease in children
- Author
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Plasencia-Martínez, J.M., Rovira, À., Caro Domínguez, P., Barber, I., García-Garrigós, E., and Arenas-Jiménez, J.J.
- Published
- 2021
- Full Text
- View/download PDF
3. Manifestaciones extratorácicas de la COVID-19 en adultos y presentación de la enfermedad en niños
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Plasencia-Martínez, J.M., Rovira, À., Caro Domínguez, P., Barber, I., García-Garrigós, E., and Arenas-Jiménez, J.J.
- Published
- 2021
- Full Text
- View/download PDF
4. Identification of a possible proteomic biomarker in Parkinson’s disease: discovery and replication in blood, brain and CSF
- Author
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Winchester, L, Barber, I, Lawton, M, Ash, J, Liu, B, Evetts, S, Hopkins-Jones, L, Lewis, S, Bresener, C, Malpartida, AB, Williams, N, Gentlemen, S, Wade-Martins, R, Ryan, B, Nevado-Holgado, A, Hu, M, Ben-Shlomo, Y, Grosset, D, and Lovestone, S
- Abstract
Biomarkers to aid diagnosis and delineate progression of Parkinson’s Disease are vital for targeting treatment in the early phases of disease. Here, we aim to discover a multi-protein panel representative of Parkinson’s and make mechanistic inferences from protein expression profiles within the broader objective of finding novel biomarkers. We used aptamer-based technology (SomaLogic®) to measure proteins in 1,599 serum samples, 85 CSF samples and 37 brain tissue samples collected from two observational longitudinal cohorts (Oxford Parkinson’s Disease Centre and Tracking Parkinson’s) and the Parkinson’s Disease Brain Bank, respectively. Random forest machine learning was performed to discover new proteins related to disease status and generate multi-protein expression signatures with potential novel biomarkers. Differential regulation analysis and pathway analysis was performed to identify functional and mechanistic disease associations. The most consistent diagnostic classifier signature was tested across modalities (CSF AUC = 0.74, p-value = 0.0009; brain AUC = 0.75, p-value = 0.006; serum AUC = 0.66, p-value = 0.0002). Focusing on serum samples and using only those with severe disease compared to controls increased the AUC to 0.72 (p-value = 1.0 × 10−04). In the validation dataset we showed that the same classifiers were significantly related to disease status (p-values The combined analytical approaches in a relatively large number of samples, across tissue types, with replication and validation, provides mechanistic insights into the disease as well as nominating a protein signature classifier that deserves further biomarker evaluation.
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- 2022
5. Extrathoracic manifestations of COVID-19 in adults and presentation of the disease in children
- Author
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Plasencia-Martinez J, Rovira A, Dominguez P, Barber I, Garcia-Garrigos E, and Arenas-Jimenez J
- Subjects
X-rays ,COVID-19 ,Diagnostic imaging ,Computed tomography - Abstract
In March 2020, the World Health Organization declared a global pandemic of COVID-19, caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2); epidemic conditions continue in nearly all countries today. Although the symptoms and imaging manifestations of COVID-19 predominantly involve the respiratory system, it is fundamental to know the manifestations of the disease and its possible complications in other organs to help in diagnosis and orient the prognosis. To improve the diagnostic process without increasing the risk of contagion unnecessarily, it is crucial to know when extrathoracic imaging tests are indicated and which tests are best in each situation. This paper aims to provide answers to these questions. To this end, we describe and illustrate the extrathoracic imaging manifestations of COVID-19 in adults as well as the entire spectrum of imaging findings in children. (C) 2021 SERAM. Published by Elsevier Espana, S.L.U. All rights reserved.
- Published
- 2021
6. 5. The Practice of Prophetic Preaching
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Augustine, Jonathan C., Barber II, William J., and Willimon, William H.
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- 2023
7. Afterword
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Augustine, Jonathan C., Barber II, William J., and Willimon, William H.
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- 2023
8. 1. When Does the Church Get Political?
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Augustine, Jonathan C., Barber II, William J., and Willimon, William H.
- Published
- 2023
9. Notes
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Augustine, Jonathan C., Barber II, William J., and Willimon, William H.
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- 2023
10. Introduction: The Preaching of Twenty-First-Century Prophets
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Augustine, Jonathan C., Barber II, William J., and Willimon, William H.
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- 2023
11. Cover
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Augustine, Jonathan C., Barber II, William J., and Willimon, William H.
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- 2023
12. Index
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Augustine, Jonathan C., Barber II, William J., and Willimon, William H.
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- 2023
13. Bibliography
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Augustine, Jonathan C., Barber II, William J., and Willimon, William H.
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- 2023
14. 4. Social Injustices the Church Cannot Ignore
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Augustine, Jonathan C., Barber II, William J., and Willimon, William H.
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- 2023
15. Dedication
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Augustine, Jonathan C., Barber II, William J., and Willimon, William H.
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- 2023
16. Praise for When Prophets Preach
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Augustine, Jonathan C., Barber II, William J., and Willimon, William H.
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- 2023
17. Foreword
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Augustine, Jonathan C., Barber II, William J., and Willimon, William H.
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- 2023
18. 3. Profiles in Prophetic Leadership
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Augustine, Jonathan C., Barber II, William J., and Willimon, William H.
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- 2023
19. Title Page, Copyright Page
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Augustine, Jonathan C., Barber II, William J., and Willimon, William H.
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- 2023
20. 2. Reckoning, Reconciliation, and Repair
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Augustine, Jonathan C., Barber II, William J., and Willimon, William H.
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- 2023
21. Understanding fish populations
- Author
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Simpson, SD, Barber, I, and Winfield, IJ
- Published
- 2018
22. The molecular evolution of spiggin nesting glue in sticklebacks
- Author
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Seear, P. J., Rosato, E., Goodall‐Copestake, W. P., and Barber, I.
- Subjects
Fish Proteins ,Male ,retrotransposon ,Molecular Sequence Data ,gene duplication ,adaptation ,Sequence Analysis, DNA ,Smegmamorpha ,Evolution, Molecular ,Alternative Splicing ,Open Reading Frames ,Molecular Adaptation ,Multigene Family ,gene family ,Animals ,Original Article ,ORIGINAL ARTICLES ,Cloning, Molecular ,Gasterosteus aculeatus ,nest building - Abstract
Gene duplication and subsequent divergence can lead to the evolution of new functions and lineage‐specific traits. In sticklebacks, the successive duplication of a mucin gene (MUC19) into a tandemly arrayed, multigene family has enabled the production of copious amounts of ‘spiggin’, a secreted adhesive protein essential for nest construction. Here, we examine divergence between spiggin genes among three‐spined sticklebacks (Gasterosteus aculeatus) from ancestral marine and derived freshwater populations, and propose underpinning gene duplication mechanisms. Sanger sequencing revealed substantial diversity among spiggin transcripts, including alternatively spliced variants and interchromosomal spiggin chimeric genes. Comparative analysis of the sequenced transcripts and all other spiggin genes in the public domain support the presence of three main spiggin lineages (spiggin A, spiggin B and spiggin C) with further subdivisions within spiggin B (B1, B2) and spiggin C (C1, C2). Spiggin A had diverged least from the ancestral MUC19, while the spiggin C duplicates had diversified most substantially. In silico translations of the spiggin gene open reading frames predicted that spiggins A and B are secreted as long mucin‐like polymers, while spiggins C1 and C2 are secreted as short monomers, with putative antimicrobial properties. We propose that diversification of duplicated spiggin genes has facilitated local adaptation of spiggin to a range of aquatic habitats.
- Published
- 2015
23. Understanding fish populations [Editorial]
- Author
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Simpson, S.D., Barber, I., Winfield, I.J., Simpson, S.D., Barber, I., and Winfield, I.J.
- Abstract
Editorial to special issue.
- Published
- 2018
24. Good parenting may not increase reproductive success under environmental extremes.
- Author
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Fox, RJ, Head, ML, Barber, I, Fox, RJ, Head, ML, and Barber, I
- Abstract
For species exhibiting parental care, the way in which parents adjust care behaviour to compensate for environmental change potentially influences offspring survival and, ultimately, population viability. Using the three-spined stickleback (Gasterosteus aculeatus) - a species in which males provide parental care by building and tending a nest and fanning the eggs - we examined how low dissolved oxygen (DO) levels affect paternal care, embryo development and survival. Although levels of nest tending were unaffected by DO level, we found that larger males fanned their embryos more under low oxygen conditions. This resulted in faster rates of embryo development within the clutches of these larger males, but reduced embryo survival at 7 days post-fertilization compared to clutches of smaller males. Our results suggest that although parents may attempt to compensate for environmental change via alterations to care behaviour, their ability to do so can be dependent on parental phenotype. This sets up the potential for oxygen levels to act on the strength and direction of selection within populations. We discuss possible explanations for the surprising result that supposedly adaptive changes in care behaviour by large males (i.e. increased fanning) led to reduced embryo survival at 7 days post-fertilization, and whether, as a consequence, acute environmental conditions may have the potential to overwhelm selection on sexual traits.
- Published
- 2018
25. Genetically elevated high-density lipoprotein cholesterol through the cholesteryl ester transfer protein gene does not associate with risk of Alzheimer's disease
- Author
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Peloso, Gina M., van der Lee, Sven J., Sims, R., van der Lee, S. J., Naj, A. C., Bellenguez, C., Badarinarayan, N., Jakobsdottir, J., Kunkle, B. W., Boland, A., Raybould, R., Bis, J. C., Martin, E. R., Grenier-Boley, B., Heilmann-Heimbach, S., Chouraki, V., Kuzma, A. B., Sleegers, K., Vronskaya, M., Ruiz, A., Graham, R. R., Olaso, R., Hoffmann, P., Grove, M. L., Vardarajan, B. N., Hiltunen, M., Nöthen, M. M., White, C. C., Hamilton-Nelson, K. L., Epelbaum, J., Maier, W., Choi, S. H., Beecham, G. W., Dulary, C., Herms, S., Smith, A. V., Funk, C. C., Derbois, Null, Forstner, A. J., Ahmad, S., Li, H., Bacq, D., Harold, D., Satizabal, C. L., Valladares, O., Squassina, A., Thomas, R., Brody, J. A., Qu, L., Sánchez-Juan, P., Morgan, T., Wolters, F. J., Zhao, Yu Yang, Garcia, F. S., Denning, N., Fornage, M., Malamon, J., Naranjo, M. C. D., Majounie, E., Mosley, T. H., Dombroski, B., Wallon, D., Lupton, M. K., Dupuis, J., Whitehead, P., Fratiglioni, L., Medway, C., Jian, X., Mukherjee, S., Keller, L., Brown, K., Lin, H., Cantwell, L. B., Panza, F., Mcguinness, B., Moreno-Grau, S., Burgess, J. D., Solfrizzi, V., Proitsi, P., Adams, H. H., Allen, M., Seripa, D., Pastor, P., Cupples, L. A., Price, N. D., Hannequin, D., Frank-García, A., Levy, D., Chakrabarty, P., Caffarra, P., Giegling, I., Beiser, A. S., Giedraitis, V., Hampel, H., Garcia, M. E., Wang, X., Lannfelt, L., Mecocci, P., Eiriksdottir, G., Crane, P. K., Pasquier, F., Boccardi, V., Henández, I., Barber, R. C., Scherer, M., Tarraga, L., Adams, P. M., Leber, M., Chen, Y., Albert, M. S., Riedel-Heller, S., Emilsson, V., Beekly, D., Braae, A., Schmidt, R., Blacker, D., Masullo, Carlo, Schmidt, H., Doody, R. S., Spalletta, Gianfranco, Longstreth, W. T., Fairchild, T. J., Bossù, P., Lopez, O. L., Frosch, M. P., Sacchinelli, E., Ghetti, B., Yang, Q., Huebinger, R. M., Jessen, F., Li, S., Kamboh, M. I., Morris, J., Sotolongo-Grau, O., Katz, M. J., Corcoran, C., Dunstan, M., Braddel, A., Thomas, C., Meggy, A., Marshall, R., Gerrish, A., Chapman, J., Aguilar, M., Taylor, S., Hill, M., Fairén, M. D., Hodges, A., Vellas, B., Soininen, H., Kloszewska, I., Daniilidou, M., Uphill, J., Patel, Y., Hughes, J. T., Lord, J., Turton, J., Hartmann, A. M., Cecchetti, R., Fenoglio Gaddo, Maria Cristina, Serpente, M., Arcaro, M., Caltagirone, C., Orfei, M. D., Ciaramella, A., Pichler, S., Mayhaus, M., Gu, W., Lleó, A., Fortea, J., Blesa, R., Barber, I. S., Brookes, K., Cupidi, C., Maletta, R. G., Carrell, D., Sorbi, S., Moebus, S., Urbano, M., Pilotto, A., Kornhuber, J., Bosco, P., Todd, S., Craig, D., Johnston, J., Gill, M., Lawlor, B., Lynch, A., Fox, N. C., Hardy, J., Albin, R. L., Apostolova, L. G., Arnold, S. E., Asthana, S., Atwood, C. S., Baldwin, C. T., Barnes, L. L., Barral, S., Beach, T. G., Becker, J. T., Bigio, E. H., Bird, T. D., Boeve, B. F., Bowen, J. D., Boxer, A., Burke, J. R., Burns, J. M., Buxbaum, J. D., Cairns, N. J., Cao, C., Carlson, C. S., Carlsson, C. M., Carney, R. M., Carrasquillo, M. M., Carroll, S. L., Diaz, C. C., Chui, H. C., Clark, D. G., Cribbs, D. H., Crocco, E. A., Decarli, C., Dick, M., Duara, R., Evans, D. A., Faber, K. M., Fallon, K. B., Fardo, D. W., Farlow, M. R., Ferris, S., Foroud, T. M., Galasko, D. R., Gearing, M., Geschwind, D. H., Gilbert, J. R., Graff-Radford, N. R., Green, R. C., Growdon, J. H., Hamilton, R. L., Harrell, L. E., Honig, L. S., Huentelman, M. J., Hulette, C. M., Hyman, B. T., Jarvik, G. P., Abner, E., Jin, L. W., Jun, G., Karydas, A., Kaye, J. A., Kim, R., Kowall, N. W., Kramer, J. H., Laferla, F. M., Lah, J. J., Leverenz, J. B., Levey, A. I., Li Quadri Cassini, Giancarlo, Lieberman, A. P., Lunetta, K. L., Lyketsos, C. G., Marson, D. C., Martiniuk, F., Mash, D. C., Masliah, E., Mccormick, W. C., Mccurry, S. M., Mcdavid, A. N., Mckee, A. C., Mesulam, M., Miller, B. L., Miller, C. A., Miller, J. W., Morris, J. C., Murrell, J. R., Myers, A. J., O'Bryant, S., Olichney, J. M., Pankratz, V. S., Parisi, J. E., Paulson, H. L., Perry, W., Peskind, E., Pierce, A., Poon, W. W., Potter, H., Quinn, J. F., Raj, A., Raskind, M., Reisberg, B., Reitz, C., Ringman, J. M., Roberson, E. D., Rogaeva, E., Rosen, H. J., Rosenberg, R. N., Sager, M. A., Saykin, A. J., Schneider, J. A., Schneider, L. S., Seeley, W. W., Smith, A. G., Sonnen, J. A., Spina, S., Stern, R. A., Swerdlow, R. H., Tanzi, R. E., Thornton-Wells, T. A., Trojanowski, J. Q., Troncoso, J. C., Van Deerlin, V. M., Van Eldik, L. J., Vinters, H. V., Vonsattel, J. P., Weintraub, S., Welsh-Bohmer, K. A., Wilhelmsen, K. C., Williamson, J., Wingo, T. S., Woltjer, R. L., Wright, C. B., Yu, C. E., Yu, L., Garzia, F., Golamaully, F., Septier, G., Engelborghs, S., Vandenberghe, R., De Deyn, P. P., Fernadez, C. M., Benito, Y. A., Thonberg, H., Forsell, C., Lilius, L., Kinhult-Stählbom, A., Kilander, L., Brundin, R., Concari, L., Helisalmi, S., Koivisto, A. M., Haapasalo, A., Dermecourt, V., Fievet, N., Hanon, O., Dufouil, C., Brice, A., Ritchie, K., Dubois, B., Himali, J. J., Keene, C. D., Tschanz, J., Fitzpatrick, A. L., Kukull, W. A., Norton, M., Aspelund, T., Larson, E. B., Munger, R., Rotter, J. I., Lipton, R. B., Bullido, M. J., Hofman, A., Montine, T. J., Coto, E., Boerwinkle, E., Petersen, R. C., Alvarez, V., Rivadeneira, F., Reiman, E. M., Gallo, Massimiliano, O'Donnell, C. J., Reisch, J. S., Bruni, A. C., Royall, D. R., Dichgans, M., Sano, M., Galimberti, D., St George-Hyslop, P., Scarpini, E., Tsuang, D. W., Mancuso, M., Bonuccelli, U., Daniele, Antonio, Wu, C. K., Peters, O., Nacmias, B., Riemenschneider, M., Heun, R., Brayne, C., Rubinsztein, D. C., Bras, J., Guerreiro, R., Al-Chalabi, A., Shaw, C. E., Collinge, J., Mann, D., Tsolaki, M., Clarimón, J., Sussams, R., Lovestone, S., O'Donovan, M. C., Owen, M. J., Behrens, T. W., Mead, S., Goate, A. M., Uitterlinden, A. G., Holmes, C., Cruchaga, C., Ingelsson, M., Bennett, D. A., Powell, J., Golde, T. E., Graff, C., De Jager, P. L., Morgan, K., Ertekin-Taner, N., Combarros, O., Psaty, B. M., Passmore, P., Younkin, S. G., Berr, C., Gudnason, V., Rujescu, D., Dickson, D. W., Dartigues, J. F., Destefano, A. L., Ortega-Cubero, S., Hakonarson, H., Campion, D., Boada, M., Kauwe, J. K., Farrer, L. A., Van Broeckhoven, C., Ikram, M. A., Jones, L., Haines, J. L., Tzourio, C., Launer, L. J., Escott-Price, V., Mayeux, R., Deleuze, J. F., Amin, N., Holmans, P. A., Pericak-Vance, M. A., Amouyel, P., van Duijn, C. M., Ramirez, A., Wang, L. S., Lambert, J. C., Seshadri, S., Williams, J., Schellenberg, G. D., Destefano, Anita L., Seshardi, Sudha, Winslow, A. R., Masullo, C. (ORCID:0000-0001-7798-3410), Spalletta, G., Daniele, A. (ORCID:0000-0003-1641-5852), Peloso, Gina M., van der Lee, Sven J., Sims, R., van der Lee, S. J., Naj, A. C., Bellenguez, C., Badarinarayan, N., Jakobsdottir, J., Kunkle, B. W., Boland, A., Raybould, R., Bis, J. C., Martin, E. R., Grenier-Boley, B., Heilmann-Heimbach, S., Chouraki, V., Kuzma, A. B., Sleegers, K., Vronskaya, M., Ruiz, A., Graham, R. R., Olaso, R., Hoffmann, P., Grove, M. L., Vardarajan, B. N., Hiltunen, M., Nöthen, M. M., White, C. C., Hamilton-Nelson, K. L., Epelbaum, J., Maier, W., Choi, S. H., Beecham, G. W., Dulary, C., Herms, S., Smith, A. V., Funk, C. C., Derbois, Null, Forstner, A. J., Ahmad, S., Li, H., Bacq, D., Harold, D., Satizabal, C. L., Valladares, O., Squassina, A., Thomas, R., Brody, J. A., Qu, L., Sánchez-Juan, P., Morgan, T., Wolters, F. J., Zhao, Yu Yang, Garcia, F. S., Denning, N., Fornage, M., Malamon, J., Naranjo, M. C. D., Majounie, E., Mosley, T. H., Dombroski, B., Wallon, D., Lupton, M. K., Dupuis, J., Whitehead, P., Fratiglioni, L., Medway, C., Jian, X., Mukherjee, S., Keller, L., Brown, K., Lin, H., Cantwell, L. B., Panza, F., Mcguinness, B., Moreno-Grau, S., Burgess, J. D., Solfrizzi, V., Proitsi, P., Adams, H. H., Allen, M., Seripa, D., Pastor, P., Cupples, L. A., Price, N. D., Hannequin, D., Frank-García, A., Levy, D., Chakrabarty, P., Caffarra, P., Giegling, I., Beiser, A. S., Giedraitis, V., Hampel, H., Garcia, M. E., Wang, X., Lannfelt, L., Mecocci, P., Eiriksdottir, G., Crane, P. K., Pasquier, F., Boccardi, V., Henández, I., Barber, R. C., Scherer, M., Tarraga, L., Adams, P. M., Leber, M., Chen, Y., Albert, M. S., Riedel-Heller, S., Emilsson, V., Beekly, D., Braae, A., Schmidt, R., Blacker, D., Masullo, Carlo, Schmidt, H., Doody, R. S., Spalletta, Gianfranco, Longstreth, W. T., Fairchild, T. J., Bossù, P., Lopez, O. L., Frosch, M. P., Sacchinelli, E., Ghetti, B., Yang, Q., Huebinger, R. M., Jessen, F., Li, S., Kamboh, M. I., Morris, J., Sotolongo-Grau, O., Katz, M. J., Corcoran, C., Dunstan, M., Braddel, A., Thomas, C., Meggy, A., Marshall, R., Gerrish, A., Chapman, J., Aguilar, M., Taylor, S., Hill, M., Fairén, M. D., Hodges, A., Vellas, B., Soininen, H., Kloszewska, I., Daniilidou, M., Uphill, J., Patel, Y., Hughes, J. T., Lord, J., Turton, J., Hartmann, A. M., Cecchetti, R., Fenoglio Gaddo, Maria Cristina, Serpente, M., Arcaro, M., Caltagirone, C., Orfei, M. D., Ciaramella, A., Pichler, S., Mayhaus, M., Gu, W., Lleó, A., Fortea, J., Blesa, R., Barber, I. S., Brookes, K., Cupidi, C., Maletta, R. G., Carrell, D., Sorbi, S., Moebus, S., Urbano, M., Pilotto, A., Kornhuber, J., Bosco, P., Todd, S., Craig, D., Johnston, J., Gill, M., Lawlor, B., Lynch, A., Fox, N. C., Hardy, J., Albin, R. L., Apostolova, L. G., Arnold, S. E., Asthana, S., Atwood, C. S., Baldwin, C. T., Barnes, L. L., Barral, S., Beach, T. G., Becker, J. T., Bigio, E. H., Bird, T. D., Boeve, B. F., Bowen, J. D., Boxer, A., Burke, J. R., Burns, J. M., Buxbaum, J. D., Cairns, N. J., Cao, C., Carlson, C. S., Carlsson, C. M., Carney, R. M., Carrasquillo, M. M., Carroll, S. L., Diaz, C. C., Chui, H. C., Clark, D. G., Cribbs, D. H., Crocco, E. A., Decarli, C., Dick, M., Duara, R., Evans, D. A., Faber, K. M., Fallon, K. B., Fardo, D. W., Farlow, M. R., Ferris, S., Foroud, T. M., Galasko, D. R., Gearing, M., Geschwind, D. H., Gilbert, J. R., Graff-Radford, N. R., Green, R. C., Growdon, J. H., Hamilton, R. L., Harrell, L. E., Honig, L. S., Huentelman, M. J., Hulette, C. M., Hyman, B. T., Jarvik, G. P., Abner, E., Jin, L. W., Jun, G., Karydas, A., Kaye, J. A., Kim, R., Kowall, N. W., Kramer, J. H., Laferla, F. M., Lah, J. J., Leverenz, J. B., Levey, A. I., Li Quadri Cassini, Giancarlo, Lieberman, A. P., Lunetta, K. L., Lyketsos, C. G., Marson, D. C., Martiniuk, F., Mash, D. C., Masliah, E., Mccormick, W. C., Mccurry, S. M., Mcdavid, A. N., Mckee, A. C., Mesulam, M., Miller, B. L., Miller, C. A., Miller, J. W., Morris, J. C., Murrell, J. R., Myers, A. J., O'Bryant, S., Olichney, J. M., Pankratz, V. S., Parisi, J. E., Paulson, H. L., Perry, W., Peskind, E., Pierce, A., Poon, W. W., Potter, H., Quinn, J. F., Raj, A., Raskind, M., Reisberg, B., Reitz, C., Ringman, J. M., Roberson, E. D., Rogaeva, E., Rosen, H. J., Rosenberg, R. N., Sager, M. A., Saykin, A. J., Schneider, J. A., Schneider, L. S., Seeley, W. W., Smith, A. G., Sonnen, J. A., Spina, S., Stern, R. A., Swerdlow, R. H., Tanzi, R. E., Thornton-Wells, T. A., Trojanowski, J. Q., Troncoso, J. C., Van Deerlin, V. M., Van Eldik, L. J., Vinters, H. V., Vonsattel, J. P., Weintraub, S., Welsh-Bohmer, K. A., Wilhelmsen, K. C., Williamson, J., Wingo, T. S., Woltjer, R. L., Wright, C. B., Yu, C. E., Yu, L., Garzia, F., Golamaully, F., Septier, G., Engelborghs, S., Vandenberghe, R., De Deyn, P. P., Fernadez, C. M., Benito, Y. A., Thonberg, H., Forsell, C., Lilius, L., Kinhult-Stählbom, A., Kilander, L., Brundin, R., Concari, L., Helisalmi, S., Koivisto, A. M., Haapasalo, A., Dermecourt, V., Fievet, N., Hanon, O., Dufouil, C., Brice, A., Ritchie, K., Dubois, B., Himali, J. J., Keene, C. D., Tschanz, J., Fitzpatrick, A. L., Kukull, W. A., Norton, M., Aspelund, T., Larson, E. B., Munger, R., Rotter, J. I., Lipton, R. B., Bullido, M. J., Hofman, A., Montine, T. J., Coto, E., Boerwinkle, E., Petersen, R. C., Alvarez, V., Rivadeneira, F., Reiman, E. M., Gallo, Massimiliano, O'Donnell, C. J., Reisch, J. S., Bruni, A. C., Royall, D. R., Dichgans, M., Sano, M., Galimberti, D., St George-Hyslop, P., Scarpini, E., Tsuang, D. W., Mancuso, M., Bonuccelli, U., Daniele, Antonio, Wu, C. K., Peters, O., Nacmias, B., Riemenschneider, M., Heun, R., Brayne, C., Rubinsztein, D. C., Bras, J., Guerreiro, R., Al-Chalabi, A., Shaw, C. E., Collinge, J., Mann, D., Tsolaki, M., Clarimón, J., Sussams, R., Lovestone, S., O'Donovan, M. C., Owen, M. J., Behrens, T. W., Mead, S., Goate, A. M., Uitterlinden, A. G., Holmes, C., Cruchaga, C., Ingelsson, M., Bennett, D. A., Powell, J., Golde, T. E., Graff, C., De Jager, P. L., Morgan, K., Ertekin-Taner, N., Combarros, O., Psaty, B. M., Passmore, P., Younkin, S. G., Berr, C., Gudnason, V., Rujescu, D., Dickson, D. W., Dartigues, J. F., Destefano, A. L., Ortega-Cubero, S., Hakonarson, H., Campion, D., Boada, M., Kauwe, J. K., Farrer, L. A., Van Broeckhoven, C., Ikram, M. A., Jones, L., Haines, J. L., Tzourio, C., Launer, L. J., Escott-Price, V., Mayeux, R., Deleuze, J. F., Amin, N., Holmans, P. A., Pericak-Vance, M. A., Amouyel, P., van Duijn, C. M., Ramirez, A., Wang, L. S., Lambert, J. C., Seshadri, S., Williams, J., Schellenberg, G. D., Destefano, Anita L., Seshardi, Sudha, Winslow, A. R., Masullo, C. (ORCID:0000-0001-7798-3410), Spalletta, G., and Daniele, A. (ORCID:0000-0003-1641-5852)
- Abstract
Introduction: There is conflicting evidence whether high-density lipoprotein cholesterol (HDL-C) is a risk factor for Alzheimer's disease (AD) and dementia. Genetic variation in the cholesteryl ester transfer protein (CETP) locus is associated with altered HDL-C. We aimed to assess AD risk by genetically predicted HDL-C. Methods: Ten single nucleotide polymorphisms within the CETP locus predicting HDL-C were applied to the International Genomics of Alzheimer's Project (IGAP) exome chip stage 1 results in up 16,097 late onset AD cases and 18,077 cognitively normal elderly controls. We performed instrumental variables analysis using inverse variance weighting, weighted median, and MR-Egger. Results: Based on 10 single nucleotide polymorphisms distinctly predicting HDL-C in the CETP locus, we found that HDL-C was not associated with risk of AD (P >.7). Discussion: Our study does not support the role of HDL-C on risk of AD through HDL-C altered by CETP. This study does not rule out other mechanisms by which HDL-C affects risk of AD.
- Published
- 2018
26. Global change, parasite transmission and disease control: lessons from ecology
- Author
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Cable, J, Barber, I, Boag, B, Ellison, AR, Morgan, ER, Murray, K, Pascoe, EL, Sait, SM, Wilson, AJ, and Booth, M
- Subjects
Life Sciences & Biomedicine - Other Topics ,Conservation of Natural Resources ,Climate Change ,infectious disease ,sustainable control ,Review Article ,TRICHINELLA-SPIRALIS ,Animal Diseases ,Host-Parasite Interactions ,SDG 3 - Good Health and Well-being ,NEGLECTED TROPICAL DISEASES ,LIFE-HISTORY EVOLUTION ,Animals ,Humans ,Parasites ,INFECTIOUS-DISEASES ,SUB-SAHARAN AFRICA ,Settore VET/06 - PARASSITOLOGIA E MALATTIE PARASSITARIE DEGLI ANIMALI ,Biology ,SDG 15 - Life on Land ,Evolutionary Biology ,Science & Technology ,MALARIA TRANSMISSION ,11 Medical And Health Sciences ,Articles ,06 Biological Sciences ,RIFT-VALLEY FEVER ,HABITAT FRAGMENTATION ,Animals, Domestic ,stressors ,LEPEOPHTHEIRUS-SALMONIS KROYER ,Life Sciences & Biomedicine ,RECENT CLIMATE-CHANGE - Abstract
Parasitic infections are ubiquitous in wildlife, livestock and human populations, and healthy ecosystems are often parasite rich. Yet, their negative impacts can be extreme. Understanding how both anticipated and cryptic changes in a system might affect parasite transmission at an individual, local and global level is critical for sustainable control in humans and livestock. Here we highlight and synthesize evidence regarding potential effects of ‘system changes’ (both climatic and anthropogenic) on parasite transmission from wild host–parasite systems. Such information could inform more efficient and sustainable parasite control programmes in domestic animals or humans. Many examples from diverse terrestrial and aquatic natural systems show how abiotic and biotic factors affected by system changes can interact additively, multiplicatively or antagonistically to influence parasite transmission, including through altered habitat structure, biodiversity, host demographics and evolution. Despite this, few studies of managed systems explicitly consider these higher-order interactions, or the subsequent effects of parasite evolution, which can conceal or exaggerate measured impacts of control actions. We call for a more integrated approach to investigating transmission dynamics, which recognizes these complexities and makes use of new technologies for data capture and monitoring, and to support robust predictions of altered parasite dynamics in a rapidly changing world. This article is part of the themed issue ‘Opening the black box: re-examining the ecology and evolution of parasite transmission’.
- Published
- 2017
27. Environmental change mediates mate choice for an extended phenotype, but not for mate quality
- Author
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Head, ML, Fox, RJ, Barber, I, Head, ML, Fox, RJ, and Barber, I
- Abstract
© 2016 The Author(s). Evolution published by Wiley Periodicals, Inc. on behalf of The Society for the Study of Evolution. Sexual cues, including extended phenotypes, are expected to be reliable indicators of male genetic quality and/or provide information on parental quality. However, the reliability of these cues may be dependent on stability of the environment, with heterogeneity affecting how selection acts on such traits. Here, we test how environmental change mediates mate choice for multiple sexual traits, including an extended phenotype–-the structure of male-built nests – in stickleback fish. First, we manipulated the dissolved oxygen (DO) content of water to create high or low DO environments in which male fish built nests. Then we recorded the mate choice of females encountering these males (and their nests), under either the same or reversed DO conditions. Males in high DO environments built more compact nests than those in low DO conditions and males adjusted their nest structure in response to changing conditions. Female mate choice for extended phenotype (male nests) was environmentally dependent (females chose more compact nests in high DO conditions), while female choice for male phenotype was not (females chose large, vigorous males regardless of DO level). Examining mate choice in this dynamic context suggests that females evaluate the reliability of multiple sexual cues, taking into account environmental heterogeneity.
- Published
- 2017
28. Environmental change mediates mate choice for an extended phenotype, but not for mate quality
- Author
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Head, ML, Fox, RJ, and Barber, I
- Subjects
Male ,Evolutionary Biology ,Behavioral plasticity ,nest ,stickleback ,extended phenotype ,Original Articles ,Environment ,Mating Preference, Animal ,Choice Behavior ,Smegmamorpha ,Nesting Behavior ,Oxygen ,Phenotype ,Animals ,Original Article ,Female ,mate choice ,multiple cues - Abstract
© 2016 The Author(s). Evolution published by Wiley Periodicals, Inc. on behalf of The Society for the Study of Evolution. Sexual cues, including extended phenotypes, are expected to be reliable indicators of male genetic quality and/or provide information on parental quality. However, the reliability of these cues may be dependent on stability of the environment, with heterogeneity affecting how selection acts on such traits. Here, we test how environmental change mediates mate choice for multiple sexual traits, including an extended phenotype–-the structure of male-built nests – in stickleback fish. First, we manipulated the dissolved oxygen (DO) content of water to create high or low DO environments in which male fish built nests. Then we recorded the mate choice of females encountering these males (and their nests), under either the same or reversed DO conditions. Males in high DO environments built more compact nests than those in low DO conditions and males adjusted their nest structure in response to changing conditions. Female mate choice for extended phenotype (male nests) was environmentally dependent (females chose more compact nests in high DO conditions), while female choice for male phenotype was not (females chose large, vigorous males regardless of DO level). Examining mate choice in this dynamic context suggests that females evaluate the reliability of multiple sexual cues, taking into account environmental heterogeneity.
- Published
- 2016
29. RNA extraction protocol (Trizol) v1
- Author
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Hebert F.O., not provided Grambauer S., not provided Barber I., not provided Landry C.R., and not provided Aubin-Horth N.
- Subjects
Protocol (science) ,Chromatography ,Chemistry ,Trizol ,RNA extraction - Abstract
This protocol describes how to extract total RNA from flatworms. It is from: Hebert, F, O; Grambauer, S; Barber, I; Landry, C, R; Aubin-Horth, N (2016): Reference transcriptome sequence resource for the study of the Cestode Schistocephalus solidus, a threespine stickleback parasite. GigaScience Database. http://dx.doi.org/10.5524/100197
- Published
- 2016
30. Reference transcriptome sequence resource for the study of the Cestode Schistocephalus solidus, a threespine stickleback parasite. v1
- Author
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Hebert F.O., not provided Grambauer S., not provided Barber I., not provided Landry C.R., and not provided Aubin-Horth N.
- Subjects
Transcriptome ,Resource (biology) ,Evolutionary biology ,Schistocephalus solidus ,Stickleback ,Parasite hosting ,Biology ,biology.organism_classification ,Sequence (medicine) - Abstract
These methods accompany the following publication: Hebert, F, O; Grambauer, S; Barber, I; Landry, C, R; Aubin-Horth, N (2016): Reference transcriptome sequence resource for the study of the Cestode Schistocephalus solidus, a threespine stickleback parasite. GigaScience Database. http://dx.doi.org/10.5524/100197
- Published
- 2016
31. Schistocephalus solidus culturing v1
- Author
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Hebert F.O., not provided Grambauer S., not provided Barber I., not provided Landry C.R., and not provided Aubin-Horth N.
- Abstract
This protocol describes how the parasitic flatworms (S. solidus) were cultured in the lab for: Hebert, F, O; Grambauer, S; Barber, I; Landry, C, R; Aubin-Horth, N (2016): Reference transcriptome sequence resource for the study of the Cestode Schistocephalus solidus, a threespine stickleback parasite. GigaScience Database. http://dx.doi.org/10.5524/100197
- Published
- 2016
32. Parasitism, personality and cognition in fish
- Author
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Barber, I., primary, Mora, A.B., additional, Payne, E.M., additional, Weinersmith, K.L., additional, and Sih, A., additional
- Published
- 2017
- Full Text
- View/download PDF
33. Copper accumulation by stickleback nests containing spiggin
- Author
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Pinho, G. L. L., primary, Martins, C. M. G., additional, and Barber, I., additional
- Published
- 2016
- Full Text
- View/download PDF
34. RNA extraction protocol (Trizol) v1
- Author
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F.O., Hebert, primary, Grambauer S., not provided, additional, Barber I., not provided, additional, Landry C.R., not provided, additional, and Aubin-Horth N., not provided, additional
- Published
- 2016
- Full Text
- View/download PDF
35. The molecular evolution of spiggin nesting glue in sticklebacks
- Author
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Seear, P.J., Rosato, E., Goodall-Copestake, W.P., Barber, I., Seear, P.J., Rosato, E., Goodall-Copestake, W.P., and Barber, I.
- Abstract
Gene duplication and subsequent divergence can lead to the evolution of new functions and lineage specific traits. In sticklebacks, the successive duplication of the mucin-like gene (MUC19) into a tandemly-arrayed, multi-gene family has enabled the production of copious amounts of ‘spiggin’, a secreted adhesive protein essential for nest construction. Here we examine divergence between spiggin genes among three-spined sticklebacks (Gasterosteus aculeatus) from ancestral marine and derived freshwater populations, and propose underpinning gene duplication mechanisms. Sanger sequencing revealed substantial diversity among spiggin transcripts, including alternatively spliced variants and interchromosomal spiggin chimeric genes. Comparative analysis of the sequenced transcripts and all other spiggin genes in the public domain support the presence of three main spiggin lineages (spiggin A, spiggin B and spiggin C) with further subdivisions within spiggin B (B1, B2) and spiggin C (C1, C2). Spiggin A had diverged least from the ancestral MUC19, while the spiggin C duplicates had diversified most substantially. In silico translations of the spiggin gene open reading frames predicted that spiggin A and B are secreted as long mucin-like polymers, while spiggin C1 and C2 are secreted as short monomers, with putative anti-microbial properties. We propose that diversification of duplicated spiggin genes has facilitated local adaptation of spiggin to a range of aquatic habitats.
- Published
- 2015
36. Extrathoracic manifestations of COVID-19 in adults and presentation of the disease in children☆
- Author
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E. García-Garrigós, J.M. Plasencia-Martínez, J.J. Arenas-Jiménez, I. Barber, P. Caro Domínguez, À. Rovira, [Plasencia-Martinez, J. M.] Hosp Gen Univ Jose Maria Morales Meseguer, Serv Radiodiagnost, Secc Radiol Urgencias & Imagen Cardiaca, Murcia, Spain, [Rovira, A.] Hosp Univ Vall dHebron, Serv Radiol, Secc Neurorradiol, Barcelona, Spain, [Caro Dominguez, P.] Hosp Univ Virgen del Rocio, Serv Radiodiagnost, Unidad Radiol Pediat, Seville, Spain, [Barber, I] Hosp St Joan de Deu, Serv Radiodiagnost, Unidad Radiol Pediat, Barcelona, Spain, [Garcia-Garrigos, E.] Hosp Gen Univ Alicante, Serv Radiodiagnost, Alicante, Spain, [Arenas-Jimenez, J. J.] Hosp Gen Univ Alicante, Serv Radiodiagnost, Alicante, Spain, [Garcia-Garrigos, E.] Inst Invest Sanitaria & Biomed Alicante ISABIAL, Alicante, Spain, and [Arenas-Jimenez, J. J.] Inst Invest Sanitaria & Biomed Alicante ISABIAL, Alicante, Spain
- Subjects
Adult ,medicine.medical_specialty ,Coronavirus disease 2019 (COVID-19) ,Heart Diseases ,diagnostic imaging ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Diagnóstico por imagen ,Rayos X ,Disease ,World health ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Serie: Radiología y COVID-19 ,Pandemic ,X-rays ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Serie: Radiology and COVID-19 ,Intensive care medicine ,Child ,Computed tomography ,General Environmental Science ,business.industry ,COVID-19 ,Thrombosis ,computed tomography ,Systemic Inflammatory Response Syndrome ,Tomografía computarizada ,Diagnostic imaging ,General Earth and Planetary Sciences ,Presentation (obstetrics) ,Nervous System Diseases ,business ,030217 neurology & neurosurgery - Abstract
Resumen El sindrome de distres respiratorio grave por el virus coronavirus 2, conocido como SARS-CoV-2, fue declarado pandemia mundial en marzo de 2020 por la Organizacion Mundial de la Salud y sigue activo actualmente en casi todos los paises del mundo. Aunque los sintomas y manifestaciones en pruebas de imagen predominan en el aparato respiratorio, conocer las manifestaciones y posibles complicaciones en otros organos sera fundamental para ayudar al diagnostico y orientar hacia el pronostico de la enfermedad. Saber cuando estan indicadas las pruebas de imagen extratoracicas y cuales son mas rentables en cada circunstancia sera crucial para mejorar el proceso diagnostico sin aumentar innecesariamente el riesgo de contagio. En este trabajo hemos tratado de proporcionar estas respuestas, y hemos descrito iconograficamente las manifestaciones radiologicas de la enfermedad COVID-19 en regiones extratoracicas en adultos, asi como en su conjunto en el paciente pediatrico.
- Published
- 2021
37. Modelos estadísticos para el estudio longitudinal y transversal de eventos no-SIDA
- Author
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Lievers Ruiz, Marco Luis, Barber i Vallés, Josep Xavier, and Departamentos de la UMH::Estadística, Matemáticas e Informática
- Subjects
estadística ,6 - Ciencias aplicadas::65 - Gestión y organización. Administración y dirección de empresas. Publicidad. Relaciones públicas. Medios de comunicación de masas [CDU] ,Sida ,enos ,modelos ,3 - Ciencias sociales::31 - Demografía. Sociología. Estadística [CDU] ,eventos no-Sida - Abstract
Estudio centrado en la aplicación de diferentes técnicas estadísticas para estudiar la relación entre eventos no-sida y diferentes biomarcadores, con el objetivo de observar los principales puntos fuertes y débiles de cada una de las técnicas aplicadas en los diferentes casos de estudio
- Published
- 2020
38. Análisis clúster aplicado al ámbito agrónomo para estudiar el comportamiento de nuevos tipos de compost
- Author
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Ibáñez Perea, Julio Alberto, Barber Vallés, Josep Xavier, Departamentos de la UMH::Estadística, Matemáticas e Informática, and Barber i Vallés, Josep Xavier
- Subjects
3 - Ciencias sociales:311 - Estadística [CDU] ,análisis ,6 - Ciencias aplicadas::65 - Gestión y organización. Administración y dirección de empresas. Publicidad. Relaciones públicas. Medios de comunicación de masas [CDU] ,clúster ,tipos de compost - Abstract
Se presenta la resolución de un análisis estadístico para estudiar qué características proporcionan nuevos tipos de compost a diferentes plantas, y así poder encontrar un sustituto al método tradicional utilizado hasta ahora (la turba). Para este estudio estadístico se ha utilizado un análisis cluster, con el cual se ha podido agrupar los diferentes compost con mismas características y ver numéricamente, a través de las variables, que grupo proporciona mejores condiciones a las plantas, y poder encontrar un sustituto a la turba
- Published
- 2017
39. More than convenience: The engagement of university students in research on global and social issues.
- Author
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Murphy MA, Minahan Zucchetto J, Barber I, and Annunziato RA
- Abstract
Young adults have long been leaders of social change, yet university student samples are often criticized for limits to generalizability. However, students may be a critical population to gather insight from to understand how they engage in activism and how their wellbeing is impacted by global conflict. We conducted two studies examining college students' perceptions of the Russian invasion of Ukraine and their activism at an urban Northeastern US university. In study one which included two waves of data collection ( n = 44 at T1; n = 30 at T2), students reported increased anxiety related to the invasion which decreased over time, but not significantly. In study two, participants ( n = 123) reported high levels of direct and indirect activism across a variety of social issues. Findings indicate that students were impacted by global conflict and engaged in social activism. University students provide valuable insight into global and social issues and should be considered as more than a convenience sample., Competing Interests: Declaration of conflicting interestsThe authors declared no potential conflicts of interest with respect to the research, authorship, and/or publication of this article.
- Published
- 2024
- Full Text
- View/download PDF
40. Skin swabbing protocol to collect DNA samples from small-bodied fish species.
- Author
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Tilley C, Barber I, and Norton W
- Subjects
- Animals, Fishes genetics, Zebrafish genetics, Animal Fins, Skin, DNA genetics, DNA analysis, DNA isolation & purification, Specimen Handling methods
- Abstract
Fish species are commonly used as experimental models in the laboratory. DNA is routinely collected from these animals to permit identification of their genotype. The current standard procedure to sample DNA is fin clipping, which involves anaesthetising individuals and removing a portion of the caudal fin. While fin clipping reliably generates good quality DNA samples for downstream applications, there is evidence that it can alter health and welfare, and impact the fish's behaviour. This in turn can result in greater variation in the data collected. In a recent study we adapted a skin swabbing protocol to collect DNA from small-bodied fish, including sticklebacks and zebrafish, without the use of analgesics, anaesthetics or sharp instruments. A rayon-tipped swab was used to collect mucus from the flank of the fish, which was then used for DNA extraction. We subsequently demonstrated that compared to fin clipping, skin swabbing triggered fewer changes in stress axis activation and behaviour. We also found that gene expression and behaviour data collected from swabbed fish were less variable than similar data collected from fish that had been fin clipped. This potentially allows smaller sample sizes in experimental groups to be used after skin swabbing, thereby reducing animal use. Here we provide a detailed protocol explaining how to collect DNA samples from small laboratory fish using skin swabs., Competing Interests: No competing interests were disclosed., (Copyright: © 2024 Tilley C et al.)
- Published
- 2024
- Full Text
- View/download PDF
41. The challenges faced by fish in a dynamic world.
- Author
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Barber I, Hirst AG, and Smith C
- Subjects
- Animals, Fishes
- Published
- 2023
- Full Text
- View/download PDF
42. Long-term environmental stability does not erode plasticity in nest building responses to changing ambient conditions.
- Author
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Chung MJ, Barber I, and Head ML
- Subjects
- Animals, Male, Nesting Behavior physiology, Climate Change, Water, Smegmamorpha physiology
- Abstract
The primary function of animal nests is to protect developing offspring from hostile and fluctuating environments. Animal builders have been shown to adjust nest construction in response to changes in their environment. However, the extent of this plasticity, and its dependence on an evolutionary history of environmental variability, is not well understood. To test whether an evolutionary history with flowing water impacts male ability to adjust nests in response to flow regime, we collected three-spined sticklebacks ( Gasterosteus aculeatus ) from three lakes and three rivers, and brought them into reproductive condition in controlled laboratory aquaria. Males were then allowed to nest under both flowing and static conditions. Nest building behaviour, nest structure and nest composition were all recorded. In comparison to males building nests under static conditions, males building in flowing water took longer to construct their nests and invested more in nesting behaviour. Moreover, nests built in flowing water contained less material, were smaller, more compact, neater and more elongated than nests built under static conditions. Whether males came from rivers or lakes had little impact on nesting activities, or male capacity to adjust behaviours in response to flow treatment. Our findings suggest that aquatic animals which have experienced a stable environment over a long period of time retain plasticity in nest-building behaviours that allow them to adjust nests to ambient flow conditions. This ability may prove crucial in coping with the increasingly unpredictable flow regimes found in anthropogenically altered waterways and those resulting from global climate change. This article is part of the theme issue 'The evolutionary ecology of nests: a cross-taxon approach'.
- Published
- 2023
- Full Text
- View/download PDF
43. The evolutionary ecology of nests: a cross-taxon approach.
- Author
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Mainwaring MC, Stoddard MC, Barber I, Deeming DC, and Hauber ME
- Subjects
- Animals, Humans, Insecta, Social Behavior, Birds, Nesting Behavior, Ecology
- Abstract
Nests, including the enormous structures housing colonies of eusocial insects and the elaborately built nests of some fishes, have long fascinated scientists, yet our understanding of the evolutionary ecology of nests has lagged behind our understanding of subsequent reproductive stages. There has, however, been a burgeoning amount of interest in nests over the past decade, and this special issue on 'The evolutionary ecology of nests: a cross-taxon approach' outlines our understanding of the form and function of nests in diverse animal lineages. Papers in 'The function of nests: mechanisms and adaptive benefits' theme examine the various functions of nests, while papers in 'The evolution of nest characteristics' theme examine the evolution of nesting behaviours. Meanwhile, papers in the 'Large communal nests in harsh environments' theme examine how the enormous structures constructed by eusocial insects and social birds enable them to inhabit harsh arid environments, whereas papers in the 'Nests in the Anthropocene' theme examine how adaptive shifts in nest architecture allow animals to adapt to breed in the age of accelerating global human impacts. Finally, the synthesis outlines how the mixture of ideas and approaches from researchers studying different taxa will advance our understanding of this exciting field of research. This article is part of the theme issue 'The evolutionary ecology of nests: a cross-taxon approach'.
- Published
- 2023
- Full Text
- View/download PDF
44. Exploring the Potential of Three-Dimensional Imaging, Printing, and Modeling in Pediatric Surgical Oncology: A New Era of Precision Surgery.
- Author
-
Valls-Esteve A, Adell-Gómez N, Pasten A, Barber I, Munuera J, and Krauel L
- Abstract
Pediatric surgical oncology is a technically challenging field that relies on CT and MRI as the primary imaging tools for surgical planning. However, recent advances in 3D reconstructions, including Cinematic Rendering, Volume Rendering, 3D modeling, Virtual Reality, Augmented Reality, and 3D printing, are increasingly being used to plan complex cases bringing new insights into pediatric tumors to guide therapeutic decisions and prognosis in different pediatric surgical oncology areas and locations including thoracic, brain, urology, and abdominal surgery. Despite this, challenges to their adoption remain, especially in soft tissue-based specialties such as pediatric surgical oncology. This work explores the main innovative imaging reconstruction techniques, 3D modeling technologies (CAD, VR, AR), and 3D printing applications through the analysis of three real cases of the most common and surgically challenging pediatric tumors: abdominal neuroblastoma, thoracic inlet neuroblastoma, and a bilateral Wilms tumor candidate for nephron-sparing surgery. The results demonstrate that these new imaging and modeling techniques offer a promising alternative for planning complex pediatric oncological cases. A comprehensive analysis of the advantages and limitations of each technique has been carried out to assist in choosing the optimal approach.
- Published
- 2023
- Full Text
- View/download PDF
45. US for Evaluation of Acute Abdominal Conditions in Neonates.
- Author
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Inarejos Clemente EJ, Barber I, Navallas Irujo M, Ladera E, Sousa P, Salas B, Fernández CV, Rodríguez-Fanjul J, and Navarro OM
- Subjects
- Infant, Newborn, Humans, Intestines, Abdomen diagnostic imaging, Diagnostic Imaging, Intestinal Volvulus diagnostic imaging, Intestinal Diseases
- Abstract
US is the imaging modality of choice for evaluation of a variety of abdominal conditions, and in recent years it has also become useful and promising as a bedside technique for assessment of acute abdominal conditions in neonates. Bedside US can help, complement, and sometimes replace radiographic or contrast-enhanced studies in critically ill and labile neonates who are difficult to transport to the fluoroscopy suite. Some of the features of bedside US can be applied as point-of-care US (POCUS) of the sick neonate. Some of the abdominal conditions in neonates that can be assessed and monitored with bedside US are necrotizing enterocolitis and its complications, malrotation with a midgut volvulus, segmental volvulus, meconium peritonitis, and complicated inguinal hernia. High-resolution US with the use of 15-MHz and higher-frequency probes allows characterization of the bowel anatomy and features of intestinal abnormalities in neonates in fine detail. Color Doppler US and microvascular imaging improve accuracy in the detection and characterization of bowel vascularity, which is important in the treatment and follow-up of patients with intestinal conditions.
© RSNA, 2023 Quiz questions for this article are available through the Online Learning Center. The slide presentation from the RSNA Annual Meeting is available for this article.- Published
- 2023
- Full Text
- View/download PDF
46. Identification of a possible proteomic biomarker in Parkinson's disease: discovery and replication in blood, brain and cerebrospinal fluid.
- Author
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Winchester L, Barber I, Lawton M, Ash J, Liu B, Evetts S, Hopkins-Jones L, Lewis S, Bresner C, Malpartida AB, Williams N, Gentlemen S, Wade-Martins R, Ryan B, Holgado-Nevado A, Hu M, Ben-Shlomo Y, Grosset D, and Lovestone S
- Abstract
Biomarkers to aid diagnosis and delineate the progression of Parkinson's disease are vital for targeting treatment in the early phases of the disease. Here, we aim to discover a multi-protein panel representative of Parkinson's and make mechanistic inferences from protein expression profiles within the broader objective of finding novel biomarkers. We used aptamer-based technology (SomaLogic®) to measure proteins in 1599 serum samples, 85 cerebrospinal fluid samples and 37 brain tissue samples collected from two observational longitudinal cohorts (the Oxford Parkinson's Disease Centre and Tracking Parkinson's) and the Parkinson's Disease Brain Bank, respectively. Random forest machine learning was performed to discover new proteins related to disease status and generate multi-protein expression signatures with potential novel biomarkers. Differential regulation analysis and pathway analysis were performed to identify functional and mechanistic disease associations. The most consistent diagnostic classifier signature was tested across modalities [cerebrospinal fluid (area under curve) = 0.74, P = 0.0009; brain area under curve = 0.75, P = 0.006; serum area under curve = 0.66, P = 0.0002]. Focusing on serum samples and using only those with severe disease compared with controls increased the area under curve to 0.72 ( P = 1.0 × 10
-4 ). In the validation data set, we showed that the same classifiers were significantly related to disease status ( P < 0.001). Differential expression analysis and weighted gene correlation network analysis highlighted key proteins and pathways with known relationships to Parkinson's. Proteins from the complement and coagulation cascades suggest a disease relationship to immune response. The combined analytical approaches in a relatively large number of samples, across tissue types, with replication and validation, provide mechanistic insights into the disease as well as nominate a protein signature classifier that deserves further biomarker evaluation., (© The Author(s) 2022. Published by Oxford University Press on behalf of the Guarantors of Brain.)- Published
- 2022
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47. Multiparametric MRI evaluation of bone sarcomas in children.
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Inarejos Clemente EJ, Navarro OM, Navallas M, Ladera E, Torner F, Sunol M, Garraus M, March JC, and Barber I
- Abstract
Osteosarcoma and Ewing sarcoma are the most common bone sarcomas in children. Their clinical presentation is very variable depending on the age of the patient and tumor location. MRI is the modality of choice to assess these bone sarcomas and has an important function at diagnosis and also for monitoring recurrence or tumor response. Anatomic sequences include T1- and T2-weighted images and provide morphological assessment that is crucial to localize the tumor and describe anatomical boundaries. Multiparametric MRI provides functional information that helps in the assessment of tumor response to therapy by using different imaging sequences and biomarkers. This review manuscript illustrates the role of MRI in osteosarcoma and Ewing sarcoma in the pediatric population, with emphasis on a functional perspective, highlighting the use of diffusion-weighted imaging and dynamic contrast-enhanced MRI at diagnosis, and during and after treatment., (© 2022. The Author(s).)
- Published
- 2022
- Full Text
- View/download PDF
48. Percutaneous cryoablation of chondroblastoma and osteoblastoma in pediatric patients.
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Serrano E, Zarco F, Gill AE, Hawkins CM, Macías N, Inarejos Clemente EJ, Torner F, Barber I, Corominas D, González EL, López-Rueda A, and Gómez FM
- Abstract
Background: To review the safety and efficacy of percutaneous cryoablation for the treatment of chondroblastoma and osteoblastoma in the pediatric and adolescent population., Materials and Methods: A retrospective review from 2016 to 2020 was performed to evaluate clinical and imaging response to percutaneous cryoablation in 11 symptomatic patients with diagnosis of chondroblastoma and osteoblastoma treated from two pediatric hospitals with at least 12-month follow-up. Technical success (correct needle placement and potential full coverage of the tumor with the planned ablation zone) and clinical success (relief of the symptoms) were evaluated. The primary objective was to alleviate pain related to the lesion(s). Immediate and late complications were recorded. Patients were followed in clinic and with imaging studies such as MRI or CT for a minimum of 6 months., Results: A total of 11 patients were included (mean 14 years, age range 9-17; male n = 8). Diagnoses were osteoblastoma (n = 4) and chondroblastoma (n = 7). Locations were proximal humerus (n = 1), femur condyle (n = 1), and proximal femur (n = 1) tibia (n = 3), acetabulum (n = 3), thoracic vertebra (n = 1) and lumbar vertebra (n = 1). Cryoablation was technically successful in all patients. Clinical success (cessation of pain) was achieved in all patients. No signs of recurrence were observed on imaging follow-up in any of the patients. One of the patients developed periprocedural right L2-L3 transient radiculopathy as major immediate complication., Conclusions: Percutaneous image-guided cryoablation can be considered potentially safe and effective treatment for chondroblastoma and osteoblastoma in children and adolescents., (© 2021. The Author(s).)
- Published
- 2021
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49. Clinical and Pathological Evidence of Anti-GD2 Immunotherapy Induced Differentiation in Relapsed/Refractory High-Risk Neuroblastoma.
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Mora J, Castañeda A, Colombo MC, Gorostegui M, Gomez F, Mañe S, Santa-Maria V, Garraus M, Macias N, Perez-Jaume S, Muñoz O, Muñoz JP, Barber I, and Suñol M
- Abstract
Background: Neuroblastic tumors (NBTs) originate from a block in the process of differentiation. Histologically, NBTs are classified in neuroblastoma (NB), ganglioneuroblastoma (GNB), and ganglioneuroma (GN). Current therapy for high-risk (HR) NB includes chemotherapy, surgery, radiotherapy, and anti-GD2 monoclonal antibodies (mAbs). Anti-GD2 mAbs induce immunological cytoxicity but also direct cell death., Methods: We report on patients treated with naxitamab for chemorefractory NB showing lesions with long periods of stable disease. Target lesions with persisting
123 I-Metaiodobenzylguanidine (MIBG) uptake after 4 cycles of immunotherapy were further evaluated by functional Magnetic Resonance Imaging (MRI) and/or Fluorodeoxyglucose (FDG)-positron emission tomography (PET). MIBG avid lesions that became non-restrictive on MRI (apparent diffusion coefficient (ADC) > 1) and/or FDG-PET negative (SUV < 2) were biopsied., Results: Twenty-seven relapse/refractory (R/R) HR-NB patients were enrolled on protocol Ymabs 201. Two (7.5%) of the 27 showed persistent bone lesions on MIBG, ADC high, and/or FDG-PET negative. Forty-four R/R HR-NB patients received chemo-immunotherapy. Twelve (27%) of the 44 developed persistent MIBG+ but FDG-PET- and/or high ADC lesions. Twelve (86%) of the 14 cases identified were successfully biopsied producing 16 evaluable samples. Histology showed ganglioneuroma maturing subtype in 6 (37.5%); ganglioneuroma mature subtype with no neuroblastic component in 4 (25%); differentiating NB with no Schwannian stroma in 5 (31%); and undifferentiated NB without Schwannian stroma in one (6%). Overall, 10 (62.5%) of the 16 specimens were histopathologically fully mature NBTs., Conclusions: Our results disclose an undescribed mechanism of action for naxitamab and highlight the limitations of conventional imaging in the evaluation of anti-GD2 immunotherapy clinical efficacy for HR-NB.- Published
- 2021
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50. Host behaviour alteration by its parasite: from brain gene expression to functional test.
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Grecias L, Hebert FO, Alves VA, Barber I, and Aubin-Horth N
- Subjects
- Animals, Behavior, Animal, Cestoda, Gene Expression, Host-Parasite Interactions, Parasites, Brain physiology, Cestode Infections veterinary, Fish Diseases parasitology, Smegmamorpha parasitology
- Abstract
Many parasites with complex life cycles modify their intermediate hosts' behaviour, presumably to increase transmission to their final host. The threespine stickleback ( Gasterosteus aculeatus ) is an intermediate host in the cestode Schistocephalus solidus life cycle, which ends in an avian host, and shows increased risky behaviours when infected. We studied brain gene expression profiles of sticklebacks infected with S. solidus to determine the proximal causes of these behavioural alterations. We show that infected fish have altered expression levels in genes involved in the inositol pathway. We thus tested the functional implication of this pathway and successfully rescued normal behaviours in infected sticklebacks using lithium exposure. We also show that exposed but uninfected fish have a distinct gene expression profile from both infected fish and control individuals, allowing us to separate gene activity related to parasite exposure from consequences of a successful infection. Finally, we find that selective serotonin reuptake inhibitor-treated sticklebacks and infected fish do not have similarly altered gene expression, despite their comparable behaviours, suggesting that the serotonin pathway is probably not the main driver of phenotypic changes in infected sticklebacks. Taken together, our results allow us to predict that if S. solidus directly manipulates its host, it could target the inositol pathway.
- Published
- 2020
- Full Text
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