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Foundation models refer to artificial intelligence (AI) models that are trained on massive amounts of data and demonstrate broad generalizability across various tasks with high accuracy. These models offer versatile, one-for-many or one-for-all solutions, eliminating the need for developing task-specific AI models. Examples of such foundation models include the Chat Generative Pre-trained Transformer (ChatGPT) and the Segment Anything Model (SAM). These models have been trained on millions to billions of samples and have shown wide-ranging and accurate applications in numerous tasks such as text processing (using ChatGPT) and natural image segmentation (using SAM). In medical image segmentation - finding target regions in medical images - there is a growing need for these one-for-many or one-for-all foundation models. Such models could obviate the need to develop thousands of task-specific AI models, which is currently standard practice in the field. They can also be adapted to tasks with datasets too small for effective training. We discuss two paths to achieve foundation models for medical image segmentation and comment on progress, challenges, and opportunities. One path is to adapt or fine-tune existing models, originally developed for natural images, for use with medical images. The second path entails building models from scratch, exclusively training on medical images.

As network services progress and mobile and IoT environments expand, numerous security concerns have surfaced for spectrum access systems. The omnipresent risk of Denial-of-Service (DoS) attacks and raising concerns about user privacy (e.g., location privacy, anonymity) are among such cyber threats. These security and privacy risks increase due to the threat of quantum computers that can compromise long-term security by circumventing conventional cryptosystems and increasing the cost of countermeasures. While some defense mechanisms exist against these threats in isolation, there is a significant gap in the state of the art on a holistic solution against DoS attacks with privacy and anonymity for spectrum management systems, especially when post-quantum (PQ) security is in mind. In this paper, we propose a new cybersecurity framework PACDoSQ, which is (to the best of our knowledge) the first to offer location privacy and anonymity for spectrum management with counter DoS and PQ security simultaneously. Our solution introduces the private spectrum bastion (database) concept to exploit existing architectural features of spectrum management systems and then synergizes them with multi-server private information retrieval and PQ-secure Tor to guarantee a location-private and anonymous acquisition of spectrum information together with hash-based client-server puzzles for counter DoS. We prove that PACDoSQ achieves its security objectives, and show its feasibility via a comprehensive performance evaluation., Comment: Accepted at IEEE Military Communications Conference, 28 October 1 November 2024, Washington, DC, USA

Recent breakthroughs in large language models (LLMs) offer unprecedented natural language understanding and generation capabilities. However, existing surveys on LLMs in biomedicine often focus on specific applications or model architectures, lacking a comprehensive analysis that integrates the latest advancements across various biomedical domains. This review, based on an analysis of 484 publications sourced from databases including PubMed, Web of Science, and arXiv, provides an in-depth examination of the current landscape, applications, challenges, and prospects of LLMs in biomedicine, distinguishing itself by focusing on the practical implications of these models in real-world biomedical contexts. Firstly, we explore the capabilities of LLMs in zero-shot learning across a broad spectrum of biomedical tasks, including diagnostic assistance, drug discovery, and personalized medicine, among others, with insights drawn from 137 key studies. Then, we discuss adaptation strategies of LLMs, including fine-tuning methods for both uni-modal and multi-modal LLMs to enhance their performance in specialized biomedical contexts where zero-shot fails to achieve, such as medical question answering and efficient processing of biomedical literature. Finally, we discuss the challenges that LLMs face in the biomedicine domain including data privacy concerns, limited model interpretability, issues with dataset quality, and ethics due to the sensitive nature of biomedical data, the need for highly reliable model outputs, and the ethical implications of deploying AI in healthcare. To address these challenges, we also identify future research directions of LLM in biomedicine including federated learning methods to preserve data privacy and integrating explainable AI methodologies to enhance the transparency of LLMs.

Given the rise in cyber threats to networked systems, coupled with the proliferation of AI techniques and enhanced processing capabilities, Denial of Service (DoS) attacks are becoming increasingly sophisticated and easily executable. They target system availability, compromising entire systems without breaking underlying security protocols. Consequently, numerous studies have focused on preventing, detecting, and mitigating DoS attacks. However, state-of-the-art systematization efforts have limitations such as isolated DoS countermeasures, shortcomings of AI-based studies, and a lack of DoS integration features like privacy, anonymity, authentication, and transparency. Additionally, the emergence of quantum computers is a game changer for DoS from attack and defense perspectives, yet it has remained largely unexplored. This study aims to address these gaps by examining (counter)-DoS in the AI era while also considering post-quantum (PQ) security when it applies. We highlight the deficiencies in the current literature and provide insights into synergistic techniques to bridge these gaps. We explore AI mechanisms for DoS intrusion detection, evaluate cybersecurity properties in cutting-edge machine learning models, and analyze weaponized AI in the context of DoS. We also investigate collaborative and distributed counter-DoS frameworks via federated learning and blockchains. Finally, we assess proactive approaches such as honeypots, puzzles, and authentication schemes that can be integrated into next-generation network systems for DoS prevention and mitigation., Comment: 10 Pages, 1 Figure, 2 Tables

Seismic wave amplification due to localized site conditions is an important aspect of regional seismic hazard assessment. Without systematic studies of frequency-dependent site-effects during strong Icelandic earthquakes, various local site proxies of large-scale studies in other seismic regions have been used in Iceland. Recently, earthquake site-effects were rigorously quantified for 34 stations in Southwest Iceland for the first time and correlated to distinct Icelandic geological units of hard rock, rock, lava rock, and sedimentary soil. These units are prevalent throughout Iceland and herein we present 1) nationwide maps of proxies (slope, Vs30, geological units) that may contribute to a better estimation of site effects and associated, 2) frequency-dependent site-amplification maps of Iceland. The frequency-dependent site factors for each geological unit are presented at 1-30 Hz and PGA. Finally, we generate site amplification maps based on recent large-scale models developed in other seismic regions (ESRM20) and various site proxies they are based on (geology- and slope-based inferred Vs30, geomorphological sedimentary thickness). We compare site-proxy maps and amplification maps from both Icelandic and large-scale, non-Icelandic, models. Neither spatial patterns nor amplification levels in either proxy or amplification maps from large-scale non-Icelandic studies resemble those observed from local quantitative strong-motion research as presented in this study. We attribute the discrepancy primarily to the young geology of Iceland and its formation history. Additionally, we compare model performance across frequencies by assessing the bias of model predictions against empirical site amplifications in the South Iceland Seismic Zone, accounting for site-to-site variability of residuals indicating the superior performance of the local amplification model.

Advancements in communication and information tech birthed the Smart Grid, optimizing energy and data transmission. Yet, user privacy is at risk due to frequent data collection. Existing privacy schemes face vulnerability with quantum machines. To tackle this, the LPM2DA scheme is introduced, utilizing lattice-based encryption and signatures for secure data aggregation. It ensures privacy, integrity, and authentication, enabling statistical analysis while preserving user privacy. Traditional aggregation schemes suffer from weak network models and centralization issues. Enter SPDBlock, a blockchain-based solution ensuring privacy, integrity, and resistance to attacks. It detects and prosecutes malicious entities while efficiently handling multi-dimensional data transmission. Through distributed decryption and secret sharing, only valid data can be decrypted with minimal involvement from smart meters. Performance tests reveal SPDBlock's superiority in communication and computational efficiency over traditional schemes., Comment: 103 pages, 8 figures

COVID-19 has deeply affected daily life and travel behaviors. Understanding these changes is crucial, prompting an investigation into socio-demographic and socio-economic factors. This study used large-scale mobile device location data in Washington, D.C., Maryland, and Virginia (DMV area) to unveil the impacts of these variables on commute trip changes. It reflected short and long-term impacts through linear regression and geographically weighted regression models. Findings indicated that counties with a higher percentage of people using walking and biking during the initial phase of COVID-19 experienced greater reductions in commute trips. For the long-term effect in November, the impact of active modes became insignificant, and individuals using public modes showed more significant trip reductions. Positive correlations were observed between median income levels and reduced commute trips. Sectors requiring ongoing outdoor operations during the pandemic showed substantial negative correlations. In the DMV area, counties with a higher proportion of Democratic voters experienced less trip reduction. Applying Geographically Weighted Regression models captured local spatial relationships, showing the emergence of local correlations as the pandemic evolved, suggesting a geographical impact pattern. Initially global, the pandemic's impact on commuting behaviors became more influenced by spatial factors over time, showing localized effects., Comment: 28 pages, 8 figures, accepted at TRR 2024

The Medical Internet of Things (MIoT) harbors resource-limited medical embedded devices that collect security-sensitive data from users for analysis, monitoring, and diagnosis. Digital signatures play a foundational role in ensuring the authentication and integrity of this sensitive medical information, critical for the trustworthiness of MIoT applications. However, traditional signatures used in current IoT systems may lack the necessary long-term security and are vulnerable to emerging quantum computer threats. NISt's PQC standards impose heavy overhead unsuitable for battery-limited MIoT devices. Efforts to design more computationally efficient PQ signatures have faced challenges, either introducing significant memory overhead and potential vulnerabilities or relying on strong assumptions. Hence, this paper introduces INFinity-HORS (INF-HORS), a lightweight PQ digital signature. To the best of our knowledge, INF-HORS is the first signer-optimal hash-based signature offering polynomial unbounded signing capabilities under minimal architectural assumptions. Unlike other PQ signatures, INF-HORS does not require hyper-tree structures or incur the high memory usage seen in multivariate counterparts. Our performance analysis confirms that INF-HORS is significantly more computationally efficient than NIST PQC standards like Dilithium and SPHINCS+. We prove INF-HORS's security in the random oracle model and show through experiments that it achieves 20x faster signature generation and smaller signature and private key sizes compared to BLISS-I on an 8-bit ATxmega128A1 microcontroller. INF-HORS does not rely on non-colluding verification servers, secure enclaves, or trusted verification assisting entities, minimizing security risks and making it ideal for MIoT with minimal cryptographic overhead and strong security assumptions., Comment: 14 pages

In this paper, we delve into the susceptibility of federated medical image analysis systems to adversarial attacks. Our analysis uncovers a novel exploitation avenue: using gradient information from prior global model updates, adversaries can enhance the efficiency and transferability of their attacks. Specifically, we demonstrate that single-step attacks (e.g. FGSM), when aptly initialized, can outperform the efficiency of their iterative counterparts but with reduced computational demand. Our findings underscore the need to revisit our understanding of AI security in federated healthcare settings.

The rise of quantum computers exposes vulnerabilities in current public key cryptographic protocols, necessitating the development of secure post-quantum (PQ) schemes. Hence, we conduct a comprehensive study on various PQ approaches, covering the constructional design, structural vulnerabilities, and offer security assessments, implementation evaluations, and a particular focus on side-channel attacks. We analyze global standardization processes, evaluate their metrics in relation to real-world applications, and primarily focus on standardized PQ schemes, selected additional signature competition candidates, and PQ-secure cutting-edge schemes beyond standardization. Finally, we present visions and potential future directions for a seamless transition to the PQ era.

Optimization-based regularization methods have been effective in addressing the challenges posed by data heterogeneity in medical federated learning, particularly in improving the performance of underrepresented clients. However, these methods often lead to lower overall model accuracy and slower convergence rates. In this paper, we demonstrate that using Vision Transformers can substantially improve the performance of underrepresented clients without a significant trade-off in overall accuracy. This improvement is attributed to the Vision transformer's ability to capture long-range dependencies within the input data.

This paper explores the security aspects of federated learning applications in medical image analysis. Current robustness-oriented methods like adversarial training, secure aggregation, and homomorphic encryption often risk privacy compromises. The central aim is to defend the network against potential privacy breaches while maintaining model robustness against adversarial manipulations. We show that incorporating distributed noise, grounded in the privacy guarantees in federated settings, enables the development of a adversarially robust model that also meets federated privacy standards. We conducted comprehensive evaluations across diverse attack scenarios, parameters, and use cases in cancer imaging, concentrating on pathology, meningioma, and glioma. The results reveal that the incorporation of distributed noise allows for the attainment of security levels comparable to those of conventional adversarial training while requiring fewer retraining samples to establish a robust model.

Federated learning offers a privacy-preserving framework for medical image analysis but exposes the system to adversarial attacks. This paper aims to evaluate the vulnerabilities of federated learning networks in medical image analysis against such attacks. Employing domain-specific MRI tumor and pathology imaging datasets, we assess the effectiveness of known threat scenarios in a federated learning environment. Our tests reveal that domain-specific configurations can increase the attacker's success rate significantly. The findings emphasize the urgent need for effective defense mechanisms and suggest a critical re-evaluation of current security protocols in federated medical image analysis systems.

In recent years, passively collected GPS data have been popularly applied in various transportation studies, such as highway performance monitoring, travel behavior analysis, and travel demand estimation. Despite multiple advantages, one of the issues is data oscillations (aka outliers or data jumps), which are unneglectable since they may distort mobility patterns and lead to wrongly or biased conclusions. For transportation studies driven by GPS data, assuring the data quality by removing noises caused by data oscillations is undoubtedly important. Most GPS-based studies simply remove oscillations by checking the high speed. However, this method can mistakenly identify normal points as oscillations. Some other studies specifically discuss the removal of outliers in GPS data, but they all have limitations and do not fit passively collected GPS data. Many studies are well developed for addressing the ping-pong phenomenon in cellular data, or cellular tower data, but the oscillations in passively collected GPS data are very different for having much more various and complicated patterns and being more uncertain. Current methods are insufficient and inapplicable to passively collected GPS data. This paper aims to address the oscillated points in passively collected GPS data. A set of heuristics are proposed by identifying the abnormal movement patterns of oscillations. The proposed heuristics well fit the features of passively collected GPS data and are adaptable to studies of different scales, which are also computationally cost-effective in comparison to current methods.

Mobile Device Location Data (MDLD) has been popularly utilized in various fields. Yet its large-scale applications are limited because of either biased or insufficient spatial coverage of the data from individual data vendors. One approach to improve the data coverage is to leverage the data from multiple data vendors and integrate them to build a more representative dataset. For data integration, further treatments on the multi-sourced dataset are required due to several reasons. First, the possibility of carrying more than one device could result in duplicated observations from the same data subject. Additionally, when utilizing multiple data sources, the same device might be captured by more than one data provider. Our paper proposes a data integration methodology for multi-sourced data to investigate the feasibility of integrating data from several sources without introducing additional biases to the data. By leveraging the uniqueness of travel pattern of each device, duplicate devices are identified. The proposed methodology is shown to be cost-effective while it achieves the desired accuracy level. Our findings suggest that devices sharing the same imputed home location and the top five most-visited locations during a month can represent the same user in the MDLD. It is shown that more than 99.6% of the sample devices having the aforementioned attribute in common are observed at the same location simultaneously. Finally, the proposed algorithm has been successfully applied to the national-level MDLD of 2020 to produce the national passenger origin-destination data for the NextGeneration National Household Travel Survey (NextGen NHTS) program.

Over the past years, interest in discourse analysis and discourse parsing has steadily grown, and many discourse-annotated corpora and, as a result, discourse parsers have been built. In this paper, we present a discourse-annotated corpus for the Persian language built in the framework of Rhetorical Structure Theory as well as a discourse parser built upon the DPLP parser, an open-source discourse parser. Our corpus consists of 150 journalistic texts, each text having an average of around 400 words. Corpus texts were annotated using 18 discourse relations and based on the annotation guideline of the English RST Discourse Treebank corpus. Our text-level discourse parser is trained using gold segmentation and is built upon the DPLP discourse parser, which uses a large-margin transition-based approach to solve the problem of discourse parsing. The performance of our discourse parser in span (S), nuclearity (N) and relation (R) detection is around 78%, 64%, 44% respectively, in terms of F1 measure., Comment: 19 Pages, 7 Figures

Understanding individuals' behavior during hurricane evacuation is of paramount importance for local, state, and government agencies hoping to be prepared for natural disasters. Complexities involved with human decision-making procedures and lack of data for such disasters are the main reasons that make hurricane evacuation studies challenging. In this paper, we utilized a large mobile phone Location-Based Services (LBS) data to construct the evacuation pattern during the landfall of Hurricane Irma. By employing our proposed framework on more than 11 billion mobile phone location sightings, we were able to capture the evacuation decision of 807,623 smartphone users who were living within the state of Florida. We studied users' evacuation decisions, departure and reentry date distribution, and destination choice. In addition to these decisions, we empirically examined the influence of evacuation order and low-lying residential areas on individuals' evacuation decisions. Our analysis revealed that 57.92% of people living in mandatory evacuation zones evacuated their residences while this ratio was 32.98% and 33.68% for people living in areas with no evacuation order and voluntary evacuation order, respectively. Moreover, our analysis revealed the importance of the individuals' mobility behavior in modeling the evacuation decision choice. Historical mobility behavior information such as number of trips taken by each individual and the spatial area covered by individuals' location trajectory estimated significant in our choice model and improve the overall accuracy of the model significantly., Comment: 22 pages, 10 figures

While benefiting people's daily life in so many ways, smartphones and their location-based services are generating massive mobile device location data that has great potential to help us understand travel demand patterns and make transportation planning for the future. While recent studies have analyzed human travel behavior using such new data sources, limited research has been done to extract multimodal travel demand patterns out of them. This paper presents a data-driven analytical framework to bridge the gap. To be able to successfully detect travel modes using the passively collected location information, we conduct a smartphone-based GPS survey to collect ground truth observations. Then a jointly trained single-layer model and deep neural network for travel mode imputation is developed. Being "wide" and "deep" at the same time, this model combines the advantages of both types of models. The framework also incorporates the multimodal transportation network in order to evaluate the closeness of trip routes to the nearby rail, metro, highway and bus lines and therefore enhance the imputation accuracy. To showcase the applications of the introduced framework in answering real-world planning needs, a separate mobile device location data is processed through trip end identification and attribute generation, in a way that the travel mode imputation can be directly applied. The estimated multimodal travel demand patterns are then validated against typical household travel surveys in the same Washington D.C. and Baltimore Metropolitan Regions., Comment: 26 pages, 12 figures

The rapid spread of COVID-19 has affected thousands of people from different socio-demographic groups all over the country. A decisive step in preventing or slowing the outbreak is the use of mobility interventions, such as government stay-at-home orders. However, different socio-demographic groups might have different responses to these orders and regulations. In this paper, we attempt to fill the current gap in the literature by examining how different communities with different age groups performed social distancing by following orders such as the national emergency declaration on March 13, as well as how fast they started changing their behavior after the regulations were imposed. For this purpose, we calculated the behavior changes of people in different mobility metrics, such as percentage of people staying home during the study period (March, April, and May 2020), in different age groups in comparison to the days before the pandemic (January and February 2020), by utilizing anonymized and privacy-protected mobile device data. Our study indicates that senior communities outperformed younger communities in terms of their behavior change. Senior communities not only had a faster response to the outbreak in comparison to young communities, they also had better performance consistency during the pandemic., Comment: 13 pages, 3 figures, 2 tables

Mobility interventions in communities play a critical role in containing a pandemic at an early stage. The real-world practice of social distancing can enlighten policymakers and help them implement more efficient and effective control measures. A lack of such research using real-world observations initiates this article. We analyzed the social distancing performance of 66,149 census tracts from 3,142 counties in the United States with a specific focus on income profile. Six daily mobility metrics, including a social distancing index, stay-at-home percentage, miles traveled per person, trip rate, work trip rate, and non-work trip rate, were produced for each census tract using the location data from over 100 million anonymous devices on a monthly basis. Each mobility metric was further tabulated by three perspectives of social distancing performance: "best performance", "effort", and "consistency". We found that for all 18 indicators, high-income communities demonstrated better social distancing performance. Such disparities between communities of different income levels are presented in detail in this article. The comparisons across scenarios also raise other concerns for low-income communities, such as employment status, working conditions, and accessibility to basic needs. This article lays out a series of facts extracted from real-world data and offers compelling perspectives for future discussions.

Mobile device location data (MDLD) contains abundant travel behavior information to support travel demand analysis. Compared to traditional travel surveys, MDLD has larger spatiotemporal coverage of population and its mobility. However, ground truth information such as trip origins and destinations, travel modes, and trip purposes are not included by default. Such important attributes must be imputed to maximize the usefulness of the data. This paper tends to study the capability of MDLD on estimating travel mode share at aggregated levels. A data-driven framework is proposed to extract travel behavior information from the MDLD. The proposed framework first identifies trip ends with a modified Spatiotemporal Density-based Spatial Clustering of Applications with Noise (ST-DBSCAN) algorithm. Then three types of features are extracted for each trip to impute travel modes using machine learning models. A labeled MDLD dataset with ground truth information is used to train the proposed models, resulting in 95% accuracy in identifying trip ends and 93% accuracy in imputing five travel modes (drive, rail, bus, bike and walk) with a Random Forest (RF) classifier. The proposed framework is then applied to two large-scale MDLD datasets, covering the Baltimore-Washington metropolitan area and the United States, respectively. The estimated trip distance, trip time, trip rate distribution, and travel mode share are compared against travel surveys at different geographies. The results suggest that the proposed framework can be readily applied in different states and metropolitan regions with low cost in order to study multimodal travel demand, understand mobility trends, and support decision making., Comment: Transportation (2021)

By the emergence of the novel coronavirus disease (COVID-19) in Wuhan, China, and its rapid outbreak worldwide, the infectious illness has changed our everyday travel patterns. In this research, our team investigated the changes in the daily mobility pattern of people during the pandemic by utilizing an integrated data panel. To incorporate various aspects of human mobility, the team focused on the Social Distancing Index (SDI) which was calculated based on five basic mobility measures. The SDI patterns showed a plateau stage in the beginning of April that lasted for about two weeks. This phenomenon then followed by a universal decline of SDI, increased number of trips and reduction in percentage of people staying at home. We called the observation Quarantine Fatigue. The Rate of Change (ROC) method was employed to trace back the start date of quarantine fatigue which was indicated to be April 15th. Our analysis showed that despite the existence of state-to-state variations, most states started experiencing a quarantine fatigue phenomenon during the same period. This observation became more important by knowing that none of the states had officially announced the reopening until late April showing that people decided to loosen up their social distancing practices before the official reopening announcement. Moreover, our analysis indicated that official reopening led to a rapid decline in SDI, raising the concern of a second wave of outbreak. The synchronized trend among states also emphasizes the importance of a more nationwide decision-making attitude for the future as the condition of each state depends on the nationwide behavior.

As image generation techniques mature, there is a growing interest in explainable representations that are easy to understand and intuitive to manipulate. In this work, we turn to co-occurrence statistics, which have long been used for texture analysis, to learn a controllable texture synthesis model. We propose a fully convolutional generative adversarial network, conditioned locally on co-occurrence statistics, to generate arbitrarily large images while having local, interpretable control over the texture appearance. To encourage fidelity to the input condition, we introduce a novel differentiable co-occurrence loss that is integrated seamlessly into our framework in an end-to-end fashion. We demonstrate that our solution offers a stable, intuitive and interpretable latent representation for texture synthesis, which can be used to generate a smooth texture morph between different textures. We further show an interactive texture tool that allows a user to adjust local characteristics of the synthesized texture image using the co-occurrence values directly.

The COVID-19 pandemic has highlighted the importance of in-silico epidemiological modelling in predicting the dynamics of infectious diseases to inform health policy and decision makers about suitable prevention and containment strategies. Work in this setting involves solving challenging inference and control problems in individual-based models of ever increasing complexity. Here we discuss recent breakthroughs in machine learning, specifically in simulation-based inference, and explore its potential as a novel venue for model calibration to support the design and evaluation of public health interventions. To further stimulate research, we are developing software interfaces that turn two cornerstone COVID-19 and malaria epidemiology models COVID-sim, (https://github.com/mrc-ide/covid-sim/) and OpenMalaria (https://github.com/SwissTPH/openmalaria) into probabilistic programs, enabling efficient interpretable Bayesian inference within those simulators.

Ever since the first case of the novel coronavirus disease (COVID-19) was confirmed in Wuhan, China, social distancing has been promoted worldwide, including the United States. It is one of the major community mitigation strategies, also known as non-pharmaceutical interventions. However, our understanding is remaining limited in how people practice social distancing. In this study, we construct a Social Distancing Index (SDI) to evaluate people's mobility pattern changes along with the spread of COVID-19. We utilize an integrated dataset of mobile device location data for the contiguous United States plus Alaska and Hawaii over a 100-day period from January 1, 2020 to April 9, 2020. The major findings are: 1) the declaration of the national emergency concerning the COVID-19 outbreak greatly encouraged social distancing and the mandatory stay-at-home orders in most states further strengthened the practice; 2) the states with more confirmed cases have taken more active and timely responses in practicing social distancing; 3) people in the states with fewer confirmed cases did not pay much attention to maintaining social distancing and some states, e.g., Wyoming, North Dakota, and Montana, already began to practice less social distancing despite the high increasing speed of confirmed cases; 4) some counties with the highest infection rates are not performing much social distancing, e.g., Randolph County and Dougherty County in Georgia, and some counties began to practice less social distancing right after the increasing speed of confirmed cases went down, e.g., in Blaine County, Idaho, which may be dangerous as well.

With the social media engagement on the rise, the resulting data can be used as a rich resource for analyzing and understanding different phenomena around us. A sentiment analysis system employs these data to find the attitude of social media users towards certain entities in a given document. In this paper we propose a sentiment analysis method for Persian text using Convolutional Neural Network (CNN), a feedforward Artificial Neural Network, that categorize sentences into two and five classes (considering their intensity) by applying a layer of convolution over input data through different filters. We evaluated the method on three different datasets of Persian social media texts using Area under Curve metric. The final results show the advantage of using CNN over earlier attempts at developing traditional machine learning methods for Persian texts sentiment classification especially for short texts., Comment: in Farsi, Iranian Journal of Electrical and Computer Engineering (IJECE), February 2020

Acquisition of bimanual motor skills, critical in several applications ranging from robotic teleoperations to surgery, is associated with a protracted learning curve. Brain connectivity based on functional Near Infrared Spectroscopy (fNIRS) data has shown promising results in distinguishing experts from novice surgeons. However, it is less well understood how expertise-related disparity in brain connectivity is modulated by dynamic temporal demands experienced during a surgical task. In this study, we use fNIRS to examine the interplay between frontal and motor brain regions in a cohort of surgical residents of varying expertise performing a laparoscopic surgical task under temporal demand. The results demonstrate that prefrontal-motor connectivity in senior residents is more resilient to time pressure. Furthermore, certain global characteristics of brain connectomes, such as the small-world index, may be used to detect the presence of an underlying stressor.

Heart rate and blink duration are two vital physiological signals which give information about cardiac activity and consciousness. Monitoring these two signals is crucial for various applications such as driver drowsiness detection. As there are several problems posed by the conventional systems to be used for continuous, long-term monitoring, a remote blink and ECG monitoring system can be used as an alternative. For estimating the blink duration, two strategies are used. In the first approach, pictures of open and closed eyes are fed into an Artificial Neural Network (ANN) to decide whether the eyes are open or close. In the second approach, they are classified and labeled using Linear Discriminant Analysis (LDA). The labeled images are then be used to determine the blink duration. For heart rate variability, two strategies are used to evaluate the passing blood volume: Independent Component Analysis (ICA); and a chrominance based method. Eye recognition yielded 78-92% accuracy in classifying open/closed eyes with ANN and 71-91% accuracy with LDA. Heart rate evaluations had a mean loss of around 16 Beats Per Minute (BPM) for the ICA strategy and 13 BPM for the chrominance based technique.

This paper discusses the convective heat transfer enhancement of non-condensing slug flows by using phase separation for local liquid circulations through a porous-tube insert. Numerical simulations were carried out to study the air-water slug flow and heat transfer without phase change (boiling and condensation) in a vertical upward flow. The governing equations of two-phase flow and heat transfer were numerically solved using the Volume of Fluid-Continuum Surface Force (VOF-CSF) method in a two-dimensional axisymmetric computational domain. The rear end (exit) of the porous tube was open to allow discharge of fluid, but two different designs of the frontal end were considered; a porous tube with a closed front that prevents the bubbles from entering the porous tube and keeps the bubbles in the annular gap; a porous tube with an open front allows the bubbles to flow through the porous tube. Simulation results show that a counter flow of the bulk liquid inside and outside the porous tube creates internal liquid circulations in both the axial and radial directions, resulting in an increased liquid velocity near the tube wall, thus an enhanced convective heat transfer. It is also found that there exists an optimum diameter of the porous-tube-insert (or annular gap dimension between the tube wall and porous tube) for convective heat transfer enhancement. The maximum Nusselt number of the porous-tube-insert cases used in this study was about five times higher than that of the liquid-only flow in a bare tube., Comment: 30 Pages, 15 Figures

This study proposes a new approach to incorporate motion duration in incremental dynamic assessments. In the proposed methodology, at each intensity level, a simulation-based approach, which is verified with actual data, is employed to determine the median duration and the median acceleration spectra of ground motions expected to occur at the site. Afterward, at each intensity level, artificial or spectrally matched motions are produced based on the median acceleration spectra and the median duration, indicating that different intensity levels are directly covered by the generated artificial or adjusted motions rather than just scaling up and down a set of recorded ground motions. In the proposed methodology, duration and acceleration spectral shape changes against intensity level while they remain the same for different intensity levels in approach where responses are derived by scaling up and down of a set of ground motions. The functional relationship between duration and seismic intensity level, which is vital for the estimation of median duration at each intensity level, is firstly investigated for the sites with different soil conditions and rupture distances. Not only is it demonstrated that the data can fit into exponential functions, but the sensitivity of the functions against different parameters is also explored as well. The proposed duration-consistent incremental seismic assessment is used in nonlinear seismic assessment of two single degree of freedom structures, with and without a degrading behavior capability. It is revealed that when changes in duration and spectral shape of the motions at different intensity levels are considered in the nonlinear dynamic analysis, an impactful influence that cannot be easily ignored is witnessed in the structural responses of incremental analyses., Comment: It is the first revised version of the paper submitted to the Journal of Engineering Structures

Soft robotic systems offer benefits over traditional rigid systems through reduced contact trauma with soft tissues and by enabling access through tortuous paths in minimally invasive surgery. However, the inherent deformability of soft robots places both a greater onus on accurate modelling of their shape, and greater challenges in realising intraoperative shape sensing. Herein we present a proprioceptive (self-sensing) soft actuator, with an electrically conductive working fluid. Electrical impedance measurements from up to six electrodes enabled tomographic reconstructions using Electrical Impedance Tomography (EIT). A new Frequency Division Multiplexed (FDM) EIT system was developed capable of measurements of 66 dB SNR with 20 ms temporal resolution. The concept was examined in two two-degree-of-freedom designs: a hydraulic hinged actuator and a pneumatic finger actuator with hydraulic beams. Both cases demonstrated that impedance measurements could be used to infer shape changes, and EIT images reconstructed during actuation showed distinct patterns with respect to each degree of freedom (DOF). Whilst there was some mechanical hysteresis observed, the repeatability of the measurements and resultant images was high. The results show the potential of FDM-EIT as a low-cost, low profile shape sensor in soft robots., Comment: Fixed PDF conversion error. Now published in ICRA 2019, IEEE International Conference on Robotics and Automation 2019

Patients suffering from quadriplegia have limited body motion which prevents them from performing daily activities. We have developed an assistive robotic system with an intuitive free-view gaze interface. The user's point of regard is estimated in 3D space while allowing free head movement and is combined with object recognition and trajectory planning. This framework allows the user to interact with objects using fixations. Two operational modes have been implemented to cater for different eventualities. The automatic mode performs a pre-defined task associated with a gaze-selected object, while the manual mode allows gaze control of the robot's end-effector position on the user's frame of reference. User studies reported effortless operation in automatic mode. A manual pick and place task achieved a success rate of 100% on the users' first attempt., Comment: 7 Pages, 9 Figures, IEEE/RSJ International Conference on Intelligent Robots and Systems (IROS 2018), Madrid, Spain

The CYCLOPS is a cable-driven parallel mechanism used for minimally invasive applications, with the ability to be customised to different surgical needs; allowing it to be made procedure- and patient-specific. For adequate optimisation, however, appropriate data on clinical constraints and task-space is required. Whereas the former can be provided through preoperative planning and imaging, the latter remains a problem, primarily for highly dexterous MIS systems. The current work focuses on the development of a task-space optimisation method for the CYCLOPS system and the development of a data collection method in a simulation environment for minimally invasive task-spaces. The same data collection method can be used for the development of other minimally invasive platforms. A case-study is used to illustrate the developed method for Endoscopic Submucosal Dissection (ESD). This paper shows that using this method, the system can be succesfully optimised for this application., Comment: * TJC Oude Vrielink and YW Pang are joint first authors. Submitted to ICRA 2018, 8 pages, 10 Figures

Gastrointestinal (GI) cancers account for 1.5 million deaths worldwide. Endoscopic Submucosal Dissection (ESD) is an advanced therapeutic endoscopy technique with superior clinical outcome due to the minimally invasive and en bloc removal of tumours. In the western world, ESD is seldom carried out, due to its complex and challenging nature. Various surgical systems are being developed to make this therapy accessible, however, these solutions have shown limited operational workspace, dexterity, or low force exertion capabilities. The current paper shows the ESD CYCLOPS system, a bimanual surgical robotic attachment that can be mounted at the end of any flexible endoscope. The system is able to achieve forces of up to 46N, and showed a mean error of 0.217mm during an elliptical tracing task. The workspace and instrument dexterity is shown by pre-clinical ex vivo trials, in which ESD is succesfully performed by a GI surgeon. The system is currently undergoing pre-clinical in vivo validation., Comment: Accepted for ICRA 2018 (International Conference on Robotics and Automation), 8 Pages, 11 Figures

With the rise of social media as an important channel for the debate and discussion of public affairs, online social networks such as Twitter have become important platforms for public information and engagement by policy makers. To communicate effectively through Twitter, policy makers need to understand how influence and interest propagate within its network of users. In this chapter we use graph-theoretic methods to analyse the Twitter debate surrounding NHS England's controversial care.data scheme. Directionality is a crucial feature of the Twitter social graph - information flows from the followed to the followers - but is often ignored in social network analyses; our methods are based on the behaviour of dynamic processes on the network and can be applied naturally to directed networks. We uncover robust communities of users and show that these communities reflect how information flows through the Twitter network. We are also able to classify users by their differing roles in directing the flow of information through the network. Our methods and results will be useful to policy makers who would like to use Twitter effectively as a communication medium., Comment: 27 pages, 6 figures, to appear in 'Dynamic Networks and Cyber-Security'

Fault control and tolerance in wireless sensor network is a challenging problem because of limited energy, bandwidth, and computational complexity. While facing numerous threats these severely resource constrained nodes are responsible for data collection, data processing, localization, time synchronization aggregation and data forwarding. One of the effective approaches to control and tolerate these threats is through clustering. In this paper we present a new method called Efficient Fault Control Mechanism for fault controlling in wireless sensor networks based on clustering and cluster-head selection. Simulation results show Efficient Fault Control Mechanism has better performance over state of art methods., Comment: 7 pages, 11 figures, Published with International Journal of Engineering Trends and Technology (IJETT). arXiv admin note: text overlap with arXiv:1209.4751 by other authors without attribution

A lead-free neutron monitor operating at High Altitude Research Laboratory (HARL), Gulmarg optimized for detecting 2.45 MeV neutron bursts produced during the atmospheric lightning discharges is also concurrently used for studying background neutron component present in the atmosphere. These background neutrons are produced due to the interaction of primary cosmic rays with the atmospheric constituents. In order to study and extract the information about the yield of the neutron production during transient atmospheric lightning discharges, the system is continuously operated to monitor and record the cosmic ray produced background secondary neutrons in the atmosphere. The data analysis of the background neutrons recorded by Lead-Free Gulmarg Neutron Monitor (LFGNM) has convincingly established that the modulation effects due to solar activity phenomena compare very well with those monitored by the worldwide IGY or NM64 type neutron monitors which have optimum energy response relatively towards the higher energy regime of the cosmic rays. The data has revealed various types of modulation phenomena like diurnal variation, Forbush decrease etc. during its entire operational period. However, a new kind of a periodic/seasonal variation pattern is also revealed in the data from September 2007 to September 2012, which is seen to be significantly consistent with the data recorded by Emilio Segre observatory, Israel (ESOI) Neutron Monitor. Interestingly, both these neutron monitors have comparable latitude and altitude. However, the same type of consistency is not observed in the data recorded by the other conventional neutron monitors operating across the globe., Comment: 4 pages, 5 figures, accepted for publication in Astroparticle Physics

This flow chart describes the baseline science algorithms for the Sea-viewing Wide Field-of-view Sensor (SeaWiFS) Data Processing System (SDPS). As such, it includes only processing steps used in the generation of the operational products that are archived by NASA's Goddard Space Flight Center (GSFC) Distributed Active Archive Center (DAAC). It is meant to provide the reader with a basic understanding of the scientific algorithm steps applied to SeaWiFS data. It does not include non-science steps, such as format conversions, and places the greatest emphasis on the geophysical calculations of the level-2 processing. Finally, the flow chart reflects the logic sequences and the conditional tests of the software so that it may be used to evaluate the fidelity of the implementation of the scientific algorithm. In many cases however, the chart may deviate from the details of the software implementation so as to simplify the presentation.

This document provides brief reports, or case studies, on a number of investigations sponsored by the Calibration and Validation Team (CVT) within the Sea-viewing Wide Field-of-view Sensor (SeaWiFS) Project. Chapter I describes the calibration and characterization of the GSFC sphere, which was used in the recent recalibration of the SeaWiFS instrument. Chapter 2 presents a revision of the diffuse attenuation coefficient, K(490), algorithm based on the SeaWiFS wavelengths. Chapter 3 provides an implementation scheme for an algorithm to remove out-of-band radiance when using a sensor calibration based on a finite width (truncated) spectral response function, e.g., between the 1% transmission points. Chapter 4 describes the implementation schemes for the stray light quality flag (local area coverage [LAC] and global area coverage [GAC]) and the LAC stray light correction.

This document provides five brief reports that address several quality control procedures under the auspices of the Calibration and Validation Element (CVE) within the Sea-viewing Wide Field-of-view Sensor (SeaWiFS) Project. Chapter 1 describes analyses of the 32 sensor engineering telemetry streams. Anomalies in any of the values may impact sensor performance in direct or indirect ways. The analyses are primarily examinations of parameter time series combined with statistical methods such as auto- and cross-correlation functions. Chapter 2 describes how the various onboard (solar and lunar) and vicarious (in situ) calibration data will be analyzed to quantify sensor degradation, if present. The analyses also include methods for detecting the influence of charged particles on sensor performance such as might be expected in the South Atlantic Anomaly (SAA). Chapter 3 discusses the quality control of the ancillary environmental data that are routinely received from other agencies or projects which are used in the atmospheric correction algorithm (total ozone, surface wind velocity, and surface pressure; surface relative humidity is also obtained, but is not used in the initial operational algorithm). Chapter 4 explains the procedures for screening level-, level-2, and level-3 products. These quality control operations incorporate both automated and interactive procedures which check for file format errors (all levels), navigation offsets (level-1), mask and flag performance (level-2), and product anomalies (all levels). Finally, Chapter 5 discusses the match-up data set development for comparing SeaWiFS level-2 derived products with in situ observations, as well as the subsequent outlier analyses that will be used for evaluating error sources.

The level-3 data products from the Sea-viewing Wide Field-of-view Sensor (SeaWiFS) are statistical data sets derived from level-2 data. Each data set will be based on a fixed global grid of equal-area bins that are approximately 9 x 9 sq km. Statistics available for each bin include the sum and sum of squares of the natural logarithm of derived level-2 geophysical variables where sums are accumulated over a binning period. Operationally, products with binning periods of 1 day, 8 days, 1 month, and 1 year will be produced and archived. From these accumulated values and for each bin, estimates of the mean, standard deviation, median, and mode may be derived for each geophysical variable. This report contains two major parts: the first (Section 2) is intended as a users' guide for level-3 SeaWiFS data products. It contains an overview of level-0 to level-3 data processing, a discussion of important statistical considerations when using level-3 data, and details of how to use the level-3 data. The second part (Section 3) presents a comparative statistical study of several binning algorithms based on CZCS and moored fluorometer data. The operational binning algorithms were selected based on the results of this study.

This document provides five brief reports that address several algorithm investigations sponsored by the Calibration and Validation Team (CVT) within the Sea-viewing Wide Field-of-view Sensor (SeaWiFS) Project. This volume, therefore, has been designated as the first in a series of algorithm volumes. Chapter 1 describes the initial suite of masks, used to prevent further processing of contaminated radiometric data, and flags, which are employed to mark data whose quality (due to a variety of factors) may be suspect. In addition to providing the mask and flag algorithms, this chapter also describes the initial strategy for their implementation. Chapter 2 evaluates various strategies for the detection of clouds and ice in high latitude (polar and sub-polar regions) using Coastal Zone Color Scanner (CZCS) data. Chapter 3 presents an algorithm designed for detecting and masking coccolithosphore blooms in the open ocean. Chapter 4 outlines a proposed scheme for correcting the out-of-band response when SeaWiFS is in orbit. Chapter 5 gives a detailed description of the algorithm designed to apply sensor calibration data during the processing of level-1b data.

This document provides brief reports, or case studies, on a number of investigations and data set development activities sponsored by the Calibration and Validation Team (CVT) within the Sea-viewing Wide Field-of-view Sensor (SeaWiFS) Project. Chapter 1 is a comparison with the atmospheric correction of Coastal Zone Color Scanner (CZCS) data using two independent radiative transfer formulations. Chapter 2 is a study on lunar reflectance at the SeaWiFS wavelengths which was useful in establishing the SeaWiFS lunar gain. Chapter 3 reports the results of the first ground-based solar calibration of the SeaWiFS instrument. The experiment was repeated in the fall of 1993 after the instrument was modified to reduce stray light; the results from the second experiment will be provided in the next case studies volume. Chapter 4 is a laboratory experiment using trap detectors which may be useful tools in the calibration round-robin program. Chapter 5 is the original data format evaluation study conducted in 1992 which outlines the technical criteria used in considering three candidate formats, the hierarchical data format (HDF), the common data format (CDF), and the network CDF (netCDF). Chapter 6 summarizes the meteorological data sets accumulated during the first three years of CZCS operation which are being used for initial testing of the operational SeaWiFS algorithms and systems and would be used during a second global processing of the CZCS data set. Chapter 7 describes how near-real time surface meteorological and total ozone data required for the atmospheric correction algorithm will be retrieved and processed. Finally, Chapter 8 is a comparison of surface wind products from various operational meteorological centers and field observations. Surface winds are used in the atmospheric correction scheme to estimate glint and foam radiances.

Methods for detecting and screening cloud contamination from satellite derived visible and infrared data are reviewed in this document. The methods are applicable to past, present, and future polar orbiting satellite radiometers. Such instruments include the Coastal Zone Color Scanner (CZCS), operational from 1978 through 1986; the Advanced Very High Resolution Radiometer (AVHRR); the Sea-viewing Wide Field-of-view Sensor (SeaWiFS), scheduled for launch in August 1993; and the Moderate Resolution Imaging Spectrometer (IMODIS). Constant threshold methods are the least demanding computationally, and often provide adequate results. An improvement to these methods are the least demanding computationally, and often provide adequate results. An improvement to these methods is to determine the thresholds dynamically by adjusting them according to the areal and temporal distributions of the surrounding pixels. Spatial coherence methods set thresholds based on the expected spatial variability of the data. Other statistically derived methods and various combinations of basic methods are also reviewed. The complexity of the methods is ultimately limited by the computing resources. Finally, some criteria for evaluating cloud screening methods are discussed.

All large spacecraft are susceptible to impacts by meteoroids and pieces of orbiting space debris. These impacts occur at extremely high speeds and can damage flight-critical systems, which can in turn lead to catastrophic failure of the spacecraft. A long-duration spacecraft developed for a mission into this environment must include adequate protection against perforation of pressurized components by such impacts. This paper presents the results of an investigation into the effects of projectile shape and material on the perforation of aluminum dual-wall structural systems. Impact damage is characterized according to the extent of perforation, crater, and spall damage in the structural systems as a result of hypervelocity projectile impact loadings. Analysis of the damage data shows that there are distinct differences in impact damage from cylindrical and spherical projectiles. Projectile density is also found to affect the type and extent of damage sustained by dual-wall structural systems.

PC-SEAPAK is designed to provide a complete and affordable capability for processing and analysis of NOAA Advanced Very High Resolution Radiometer (AVHRR) and Nimbus-7 Coastal Zone Color Scanner (CZCS) data. Since the release of version 3.0 over a year ago, significant revisions were made to the AVHRR and CZCS programs and to the statistical data analysis module, and a number of new programs were added. This new version has 114 procedures listed in its menus. The package continues to emphasize user-friendliness and interactive data analysis. Additionally, because the scientific goals of the ocean color research being conducted have shifted to larger space and time scales, batch processing capabilities were enhanced, allowing large quantities of data to be easily ingested and analyzed. The development of PC-SEAPAK was paralled by two other activities that were influential and assistive: the global CZCS processing effort at GSFC and the continued development of VAX-SEAPAK. SEAPAK incorporates the instrument calibration and support all levels of data available from the CZCS archive.

Several datasets regarding the ocean in the Southern Hemisphere are combined into a coregistered format to analyze the use of the data in multidisciplinary research. The datasets are described detailing bathymetric climatological data on surface pigment concentration, eddy-kinetic-energy measurements, surface wind-stress magnitudes, sea-surface temperatures, surface densities, and nitrate concentrations. The data are combined in a common projection which facilitates the comparison of the fields, and the combined data yield insights regarding such phenomena as bottom topography, surface heat and moisture fluxes, and divergences in flow. The number of available datasets is shown to be good, and the data can be used to develop working hypotheses on the relationships between physical and biogeochemical processes.

The SEAPAK is a user-interactive satellite data analysis package that was developed for the processing and interpretation of Nimbus-7/Coastal Zone Color Scanner (CZCS) and the NOAA Advanced Very High Resolution Radiometer (AVHRR) data. Significant revisions were made since version 1.0, and the ancillary environmental data analysis module was greatly expanded. The package continues to be user friendly and user interactive. Also, because the scientific goals of the ocean color research being conducted have shifted to large space and time scales, batch processing capabilities for both satellite and ancillary environmental data analyses were enhanced, thus allowing for large quantities of data to be ingested and analyzed.

The SEAPAK is a user interactive satellite data analysis package that was developed for the processing and interpretation of Nimbus-7/Coastal Zone Color Scanner (CZCS) and the NOAA Advanced Very High Resolution Radiometer (AVHRR) data. Significant revisions were made to version 1.0 of the guide, and the ancillary environmental data analysis module was expanded. The package continues to emphasize user friendliness and user interactive data analyses. Additionally, because the scientific goals of the ocean color research being conducted have shifted to large space and time scales, batch processing capabilities for both satellite and ancillary environmental data analyses were enhanced, thus allowing large quantities of data to be ingested and analyzed in background.