1. Differential Deoxyribonucleic Acid Methylation in Painful Versus Non-Painful Degenerating Intervertebral Discs: A Human Case Study
- Author
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Yeater, Taylor D., Lee, Peter, Kawarai, Yuya, and Stone, Laura S.
- Abstract
Chronic back pain poses a significant health concern. Though back pain is often attributed to disc degeneration (DD), intervertebral disc (IVD) degeneration is frequently experienced without pain. Why does DD lead to discogenic LBP in some cases and remain asymptomatic in others? A growing body of evidence suggests epigenetic modifications, such as DNA methylation, contribute to pathological DD. Understanding DNA methylation in discogenic LBP is crucial due to its reversibility, offering a promising therapeutic target. The goal of this study was to identify DNA methylation patterns associated with painful vs. pain-free DD. In a case involving a subject with LBP and DD at multiple IVD levels, a lumbar discogram was performed before surgery to pinpoint the discs causing pain. Despite severe degeneration, one spinal level (L5/S1) scored 0/10 on the discogram while L3/L4 and L4/L5 produced pain reports of 10/10 and 8/10, respectively. Next, DNA was isolated from the nucleus pulposus of discs collected during surgery. Methylation analysis was conducted using Illumina Infinium MethylationEPIC v2.0 BeadChip. SeSAMe pipeline in R determined methylation levels (beta values). After filtering for greater than 20% effect size, 315 gene-associated promoter sites were identified. Pathway enrichment analysis revealed terms related to nerve growth (e.g., TRK receptor binding, substrate adhesion-dependent cell spreading, netrin-1 signaling), as well as immune processes (e.g., neutrophil extravasation, T-cell polarity, CD28 co-stimulation). These findings suggest a potential epigenetic mechanism behind the disconnect between DD and pain; thus, raising the possibility of diagnostic or therapeutic strategies for discerning or treating painful disc degeneration.
- Published
- 2024
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