19 results on '"Sheils, Orla"'
Search Results
2. BRAF TI799A mutation occurring in a case of malignant struma ovarii
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Flavin, Richard, Smyth, Paul, Crotty, Paul, Finn, Stephen, Cahill, Susanne, Denning, Karen, Li, Jinghuan, O'Regan, Esther, O'Leary, John, and Sheils, Orla
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BRCA mutations -- Analysis ,Thyroid cancer -- Genetic aspects ,Thyroid cancer -- Care and treatment ,Thyroid cancer -- Case studies ,Health - Published
- 2007
3. RET/PTC rearrangements in Hashimoto's thyroiditis
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Sheils, Orla, Smyth, Paul, Finn, Stephen, Sweeney, Eamon C., and O'Leary, John J.
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Health - Abstract
TO THE EDITOR: We have read the article by Nikiforova et al with interest, and feel compelled to comment on some of the material contained therein. There are a number [...]
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- 2002
4. Epigenetic Modifier UHRF1 May Be a Potential Target in Malignant Pleural Mesothelioma
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Baird, Anne-Marie, Finn, Stephen P., Gray, Steven G., and Sheils, Orla
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- 2021
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5. A novel role for the macrophage galactose-type lectin receptor in mediating von Willebrand factor clearance
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Ward, Soracha E., O’Sullivan, Jamie M., Drakeford, Clive, Aguila, Sonia, Jondle, Christopher N., Sharma, Jyotika, Fallon, Padraic G., Brophy, Teresa M., Preston, Roger J. S., Smyth, Paul, Sheils, Orla, Chion, Alain, and O’Donnell, James S.
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Previous studies have shown that loss of terminal sialic acid causes enhanced von Willebrand factor (VWF) clearance through the Ashwell-Morrell receptor (AMR). In this study, we investigated (1) the specific importance of N- vs O-linked sialic acid in protecting against VWF clearance and (2) whether additional receptors contribute to the reduced half-life of hyposialylated VWF. α2-3-linked sialic acid accounts for <20% of total sialic acid and is predominantly expressed on VWF O-glycans. Nevertheless, specific digestion with α2-3 neuraminidase (α2-3Neu-VWF) was sufficient to cause markedly enhanced VWF clearance. Interestingly, in vivo clearance experiments in dual VWF−/−/Asgr1−/− mice demonstrated enhanced clearance of α2-3Neu-VWF even in the absence of the AMR. The macrophage galactose-type lectin (MGL) is a C-type lectin that binds to glycoproteins expressing terminal N-acetylgalactosamine or galactose residues. Importantly, the markedly enhanced clearance of hyposialylated VWF in VWF−/−/Asgr1−/− mice was significantly attenuated in the presence of an anti-MGL inhibitory antibody. Furthermore, dose-dependent binding of human VWF to purified recombinant human MGL was confirmed using surface plasmon resonance. Additionally, plasma VWF:Ag levels were significantly elevated in MGL1−/− mice compared with controls. Collectively, these findings identify MGL as a novel macrophage receptor for VWF that significantly contributes to the clearance of both wild-type and hyposialylated VWF.
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- 2018
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6. Expanding applications of diagnostic tools
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Sheils, Orla
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Thyroid cancer -- Care and treatment ,Thyroid cancer -- Research ,Medical tests -- Usage ,Biotechnology industry ,Business - Abstract
Research in developing new diagnostic tools to identify markers, which indicate progression of thyroid cancer, is discussed.
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- 2006
7. N-linked glycans within the A2 domain of von Willebrand factor modulate macrophage-mediated clearance
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Chion, Alain, O’Sullivan, Jamie M., Drakeford, Clive, Bergsson, Gudmundur, Dalton, Niall, Aguila, Sonia, Ward, Soracha, Fallon, Padraic G., Brophy, Teresa M., Preston, Roger J. S., Brady, Lauren, Sheils, Orla, Laffan, Michael, McKinnon, Thomas A. J., and O’Donnell, James S.
- Abstract
Enhanced von Willebrand factor (VWF) clearance is important in the etiology of von Willebrand disease. However, the molecular mechanisms underlying VWF clearance remain poorly understood. In this study, we investigated the role of VWF domains and specific glycan moieties in regulating in vivo clearance. Our findings demonstrate that the A1 domain of VWF contains a receptor-recognition site that plays a key role in regulating the interaction of VWF with macrophages. In A1-A2-A3 and full-length VWF, this macrophage-binding site is cryptic but becomes exposed following exposure to shear or ristocetin. Previous studies have demonstrated that the N-linked glycans within the A2 domain play an important role in modulating susceptibility to ADAMTS13 proteolysis. We further demonstrate that these glycans presented at N1515 and N1574 also play a critical role in protecting VWF against macrophage binding and clearance. Indeed, loss of the N-glycan at N1515 resulted in markedly enhanced VWF clearance that was significantly faster than that observed with any previously described VWF mutations. In addition, A1-A2-A3 fragments containing the N1515Q or N1574Q substitutions also demonstrated significantly enhanced clearance. Importantly, clodronate-induced macrophage depletion significantly attenuated the increased clearance observed with N1515Q and N1574Q in both full-length VWF and A1-A2-A3. Finally, we further demonstrate that loss of these N-linked glycans does not enhance clearance in VWF in the presence of a structurally constrained A2 domain. Collectively, these novel findings support the hypothesis that conformation of the VWF A domains plays a critical role in modulating macrophage-mediated clearance of VWF in vivo.
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- 2016
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8. Pluripotency markers are differentially induced by MEK inhibition in thyroid and melanoma BRAFV600E cell lines
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Dorris, Emma R., Blackshields, Gordon, Sommerville, Gary, Alhashemi, Mohsen, Dias, Andrew, McEneaney, Victoria, Smyth, Paul, O'Leary, John J., and Sheils, Orla
- Abstract
ABSTRACTOncogenic mutations in BRAF are common in melanoma and thyroid carcinoma and drive constitutive activation of the MAPK pathway. Molecularly targeted therapies of this pathway improves survival compared to chemotherapy; however, responses tend to be short-lived as resistance invariably occursCell line models of melanoma and thyroid carcinoma, +/− BRAFV600Eactivating mutation, were treated with the MEK inhibitor PD0325901. Treated and naive samples were assayed for expression of key members of the MAPK pathway. Global microRNA expression profiling of naive and resistant cells was performed via next generation sequencingand indicated pluripotency pathways in resistance. Parental cell lines were progressed to holoclones to confirm the miRNA stemness profileMembers of the MIR302/373/374/520family of embryonic stem cell specific cell cycle regulating (ESCC) microRNAs were identified as differentially expressed between resistant BRAFV600Emelanoma and thyroid cell lines. Upregulated expression of gene and protein stemness markers, upregulated expression of MAPK pathway genes and downregulation of the ESCC MIR302cluster in BRAFV600Emelanoma indicated an increased stem-like phenotype in resistant BRAFV600Emelanoma. Conversely, downregulated expression of gene and protein stemness markers, downregulated expression of MAPK pathway genes, upregulation of the ESCC MIR520cluster, reeexpression of cell surface receptors, and induced differentiation-associated morphology in resistant BRAFV600Eindicate a differentiated phenotype associated with MEK inhibitor resistance in BRAFV600Ethyroid cellsThe differential patterns of resistance observed between BRAFV600Emelanoma and thyroid cell lines may reflect tissue type or de novodifferentiation, but could have significant impact on the response of primary and metastatic cells to MEK inhibitor treatment. This study provides a basis for the investigation of the cellular differentiation/self-renewal access and its role in resistance to MEK inhibition.
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- 2016
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9. Evaluation of Zinc--2-Glycoprotein and Proteasome Subunit -Type 6 Expression in Prostate Cancer Using Tissue Microarray Technology
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O'Hurley, Gillian, O'Grady, Anthony, Smyth, Paul, Byrne, Jennifer, O'Leary, John J., Sheils, Orla, Watson, R. William G., and Kay, Elaine W.
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Prostate cancer CaP is a significant cause of illness and death in males. Current detection strategies do not reliably detect the disease at an early stage and cannot distinguish aggressive versus nonaggressive CaP leading to potential overtreatment of the disease and associated morbidity. Zinc--2-glycoprotein ZAG and proteasome subunit -Type 6 PSMB-6 were found to be up-regulated in the serum of CaP patients with higher grade tumors after 2-dimensional difference gel electrophoresis analysis. The aim of this study was to investigate if ZAG and PSMB-6 were also overexpressed in prostatic tumor tissue of CaP patients. Immunohistochemical analysis was performed on CaP tissue microarrays with samples from 199 patients. Confirmatory gene expression profiling for ZAG and PSMB-6 were performed on 4 cases using Laser Capture Microdissection and TaqMan real-time polymerase chain reaction. ZAG expression in CaP epithelial cells was inversely associated with Gleason grade benign prostatic hyperplasia>G3>G4G5. PSMB-6 was not expressed in either tumor or benign epithelium. However, strong PSMB-6 expression was noted in stromal and inflammatory cells. Our results indicate ZAG as a possible predictive marker of Gleason grade. The inverse association between grade and tissue expression with a rising serum protein level is similar to that seen with prostate-specific antigen. In addition, the results for both ZAG and PSMB-6 highlight the challenges in trying to associate the protein levels in serum with tissue expression.
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- 2010
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10. Potentially important microRNA cluster on chromosome 17p13.1 in primary peritoneal carcinoma
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Flavin, Richard J, Smyth, Paul C, Laios, Alexandros, O'Toole, Sharon A, Barrett, Ciara, Finn, Stephen P, Russell, Susan, Ring, Martina, Denning, Karen M, Li, Jinghuan, Aherne, Sinead T, Sammarae, Dania A, Aziz, Natasha A, Alhadi, Araibi, Sheppard, Brian L, Lao, Kai, Sheils, Orla M, and O'Leary, John J
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MicroRNAs are a group of small non-coding RNAs approximately 22 nucleotides in length. Recent work has shown differential expression of mature microRNAs in human cancers. We characterized the alteration in expression of a select group of microRNAs in primary peritoneal carcinoma relative to matched cases of ovarian serous carcinoma. MicroRNA expression was analysed using semi-quantitative stem-loop RT-PCR on a set of 34 formalin-fixed paraffin-embedded samples. Protein expression of p53 and bcl-2 was quantified in the corresponding tissue microarray. We provide definitive evidence that there is downregulation of a select group of microRNAs in tumours meeting Gynaecological Oncology Group criteria for primary peritoneal carcinoma relative to ovarian serous carcinoma. Specifically, we show decreased p53 expression and downregulation of miR-195 and miR-497 from the microRNA cluster site at chromosome 17p13.1 in primary peritoneal carcinoma relative to ovarian serous carcinoma. miR-195 and miR-497 may have potential roles as tumour-suppressor genes in primary peritoneal tumourigenesis.
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- 2009
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11. The induction of a mesenchymal phenotype by platelet cloaking of cancer cells is a universal phenomenon
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Spillane, Cathy D., Cooke, Niamh M., Ward, Mark P., Kenny, Dermot, Blackshields, Gordon, Kelly, Tanya, Bates, Mark, Huang, Yanmei, Martin, Cara, Skehan, Sinead, Canney, Aoife, Gallagher, Michael, Smyth, Paul, Brady, Nathan, Clarke, Andres, Mohamed, Bashir, Norris, Lucy, Brooks, Doug A., Brooks, Robert D., Heatlie, Jessica K., Selemidis, Stavros, Hanniffy, Sean, Dixon, Eric, Sheils, Orla, O'Toole, Sharon A., and O'Leary, John J.
- Abstract
•Platelet cancer cell interactions are a key factor in driving the pro-metastatic phenotype.•Platelet cancer cell interactions appear to be mediated by 5 key genes which have established roles in metastasis.•Targeting these mediators of metastasis could improve outcomes for cancer patients.
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- 2021
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12. Altered eIF6 and Dicer expression is associated with clinicopathological features in ovarian serous carcinoma patients
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Flavin, Richard J, Smyth, Paul C, Finn, Stephen P, Laios, Alexandros, O'Toole, Sharon A, Barrett, Ciara, Ring, Martina, Denning, Karen M, Li, Jinghuan, Aherne, Sinead T, Aziz, Natasha A, Alhadi, Araibi, Sheppard, Brian L, Loda, Massimo, Martin, Cara, Sheils, Orla M, and O'Leary, John J
- Abstract
MicroRNAs are a group of small non-coding RNAs approximately 22 nucleotides in length. Recent work has shown differential expression of mature microRNAs in human cancers. Production and function of microRNAs require coordinated processing by proteins of the microRNA machinery. Dicer and Drosha (RNase III endonucleases) are essential components of the microRNA machinery. Recently, the ribosome anti-association factor eIF6 has also been found to have a role in microRNA-mediated post-transcriptional silencing. We characterized the alterations in the expression of genes encoding proteins of microRNA machinery in ovarian serous carcinoma. Protein expression of eIF6 and Dicer was quantified in a tissue microarray of 66 ovarian serous carcinomas. Dicer, Drosha and eIF6 mRNA expression was analysed using quantitative reverse transcription-PCR on an independent set of 50 formalin-fixed, paraffin-embedded ovarian serous carcinoma samples. Expression profiles of eIF6 and Dicer were correlated with clinicopathological and patient survival data. We provide definitive evidence that eIF6 and Dicer are both upregulated in a significant proportion of ovarian serous carcinomas and are associated with specific clinicopathological features, most notably low eIF6 expression being associated with reduced disease-free survival. The status of eIF6 and proteins of the microRNA machinery may help predict toxicity and susceptibility to future interfering RNA-based therapy.Modern Pathology (2008) 21, 676–684; doi:10.1038/modpathol.2008.33; published online 7 March 2008
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- 2008
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13. A molecular expression signature distinguishing follicular lesions in thyroid carcinoma using preamplification RT-PCR in archival samples
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Denning, Karen M, Smyth, Paul C, Cahill, Susanne F, Finn, Stephen P, Conlon, Eilish, Li, JingHuan, Flavin, Richard J, Aherne, Sinead T, Guenther, Simone M, Ferlinz, Astrid, O'Leary, John J, and Sheils, Orla M
- Abstract
Follicular variant of papillary thyroid carcinoma is a lesion that frequently causes difficulties from a diagnostic perspective in the laboratory. The purpose of this study was to interrogate a cohort of archival thyroid lesions using gene expression analysis of a panel of markers proposed to have utility as adjunctive markers in the diagnosis of thyroid neoplasia and follicular variant of papillary thyroid carcinoma in particular. Laser Capture Microdissection was used to procure pure cell populations for extraction. In addition a novel, multiplex preamplification technique was used to facilitate analysis of multiple targets. The panel comprised: HLA-DMA, HLA-DBQ1, CD74, CSNK1G2, IRF3, KRAS2, LYN, MT1K, MT1X, RAB23, TGFB1 and TOP2A, with CDKN1B as an endogenous control. Expression profiles for each target were generated using TaqMan®Real-Time PCR. HLA-DMA, HLA-DQB1, MT1X, CSNK1G2 and RAB23 were found to be differentially expressed (P<0.05) when comparing follicular adenoma and follicular variant of papillary thyroid carcinoma. Comparison of follicular adenoma and follicular thyroid carcinoma groups showed significant differential expression for MT1K, MT1X and RAB23 (P<0.05). Comparison of the papillary thyroid carcinoma group (classic and follicular variants) and the follicular adenoma group showed differential expression for CSNK1G2, HLA-DQB1, MT1X and RAB23 (P<0.05). Finally, KRAS2 was found to be differentially expressed (P<0.05) when comparing the papillary thyroid carcinoma and follicular thyroid carcinoma groups. This panel of molecular targets discriminates between follicular adenoma, papillary thyroid carcinoma, follicular variant of papillary thyroid carcinoma and follicular thyroid carcinoma by their expression repertoires. It may have utility for broader use in the setting of fine-needle aspiration cytology and could improve the definitive diagnosis of certain categories of thyroid malignancy.Modern Pathology (2007) 20, 1095–1102; doi:10.1038/modpathol.3800943; published online 27 July 2007
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- 2007
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14. Molecular classification and biomarker discovery in papillary thyroid carcinoma
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Sheils, Orla
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Papillary thyroid carcinoma (PTC) is the most common thyroid malignancy, with an incidence of approximately 22,000 cases in 2004 in the USA. Incidence is increasing, with a global estimate of half a million new cases this year. PTC is found in a variety of morphologic variants, usually grows slowly and is clinically indolent, although rare, aggressive forms with local invasion or distant metastases can occur. In recent years, thyroid cancer has been at the forefront of molecular pathology as a result of the consequences of the Chernobyl disaster and the recognition of the role of Ret/PTC rearrangements in PTC. Nonetheless, the molecular pathogenesis of this disease remains poorly characterized. In the clinical setting, benign thyroid nodules are far more frequent, and distinguishing between them and malignant nodules is a common diagnostic problem. It is estimated that 5–10% of people will develop a clinically significant thyroid nodule during their lifetime. Although the introduction of fine-needle aspiration has made PTC identification more reliable, clinicians often have to make decisions regarding patient care on the basis of equivocal information. Thus, the existing diagnostic tools available to distinguish benign from malignant neoplasms are not always reliable. This article will critically evaluate recently described putative biomarkers and their potential future role for diagnostic purposes in fine-needle aspiration cytology samples. It will highlight the evolution of our understanding of the molecular biology of PTC, from a narrow focus on specific molecular lesions such as Ret/PTC rearrangements to a pan-genomic approach.
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- 2005
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15. Analysis of DNA in Endometrial Cancer Cells Treated with Phyto-Estrogenic Compounds using Comparative Genomic Hybridisation Microarrays
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O’Toole, Sharon A., Sheppard, Brian L., Sheils, Orla, O’Leary, John J., Spengler, Barbara, and Christoffel, Volker
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- 2005
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16. Array comparative genomic hybridisation analysis of gamma-irradiated human thyrocytes
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Finn, Stephen P., Smyth, Paul, O’Regan, Esther, Cahill, Susanne, Flavin, Richard, O’Leary, John, and Sheils, Orla
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The susceptibility of thyroid epithelium to radiation-induced carcinogenesis is well recognised. In this context, thyroid carcinogenesis is associated with specific somatic ret/papillary thyroid carcinoma (PTC) rearrangements and morphologically with the papillary phenotype. Previous studies have demonstrated the possibility of inducing ret rearrangements in vitro using X-rays. The purpose of our study was to assess whether gamma (γ) radiation using a Caesium 137 source can induce specific ret rearrangements in a human thyroid epithelial cell culture model. We further hypothesised that if radiation-induced thyroid carcinogenesis is associated with non-random rearrangement events, then DNA copy gain and loss induced by irradiation may also occur in a non-random manner. We irradiated SV40-immortalised human thyroid epithelial cells with incremental doses of γ-radiation and, using TaqMan reverse-transcription polymerase chain reaction, looked for the presence of the common ret rearrangements. Cohorts showing evidence of ret/PTC chimeric transcripts were further analysed using microarray comparative genomic hybridisation (CGH) to detect copy gain and loss associated with radiation. Four Grays of γ-radiation was sufficient to induce ret/PTC-3. In this model, transcripts of ret/PTC-1 were not detected, and we suggest that the type of radiation may influence the resulting rearrangement that occurs. Using array CGH, we have demonstrated a predominant pattern of subtelomeric deletions occurring in association with this radiation cohort and raise the possibility that chromosome 10 may be a hotspot for radiation-induced damage for as yet unknown reasons.
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- 2004
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17. Assessment of ret/PTC‐1 rearrangements in neoplastic thyroid tissue using TaqMan RT‐PCR
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Sheils, Orla M., O'Leary, John J., and Sweeney, Eamon C.
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Among oncogenes studied in thyroid cancers, a specific activated form of c‐ret has been found in a minority of papillary thyroid carcinomas (PTCs). In these tumours, c‐ret is activated when by somatic rearrangements, the intracellular domain of RET is juxtaposed with the amino‐terminal portion of a different donor gene such as H4, thereby generating a chimeric transcript (ret/PTC‐1). The functional effects of c‐ret activation and its prognostic implications are currently unclear. This study was undertaken to assess the frequency of RET/PTC‐1 expression, any distinctive features of positive tumours to which it might be related, and its prognostic importance. Archival material from 88 thyroid neoplasms [50 PTCs, eight anaplastic carcinomas (ATCs), 25 follicular thyroid carcinomas (FTCs) and five follicular adenomas (FAs)] were analysed for ret/PTC‐1 and H4 expression using 5′ nuclease assay (TaqMan RT‐PCR). RNA from the TPC‐1 cell line was included as a positive control for c‐ret activation. No FTC or FA displayed activation of ret/PTC‐1, though all expressed H4. c‐ret activation was found in 24% of PTCs (12 of 50), in 87.5% of ATCs (7 of 8), and in 33% of the combined PTC/ATC group. The frequency of c‐ret activation in the aggressive ATC variants noted here suggests that ret/PTC‐1‐positive PTCs might also have a similar poor prognosis and a follow‐up study on this cohort is in progress. Ninety per cent of ret/PTC‐1‐positive tumours failed to express H4, a phenomenon that has not been described previously and which may have considerable bearing on tumour morphology. A statistically significant proportion (58%) of ret/PTC‐1‐positive, H4‐negative PTCs was associated with chronic inflammatory cell infiltration of the tumour and/or the surrounding thyroid. This association has not been reported previously. Copyright © 2000 John Wiley & Sons, Ltd.
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- 2000
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18. TSH receptor status of thyroid neoplasms—TaqMan RT‐PCR analysis of archival material
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Sheils, Orla M. and Sweeney, Eamon C.
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Regulation of thyroid follicular cell proliferation and function is mediated by the interaction of TSH with its receptor (TSHr) on the plasma membrane. While it is recognized clinically that responsiveness of thyroid epithelial tumours to TSH varies with the histological type and grade of neoplasm, the level of TSHr expression in these different tumours has not been quantified hitherto. The aim of this study was to provide this information. Total RNA was extracted from 125 samples of formalin‐fixed, paraffin‐embedded thyroid tissue comprising 48 papillary (PTC), 29 follicular (FTC), eight anaplastic (ATC), and five medullary thyroid carcinomas (MTC), in addition to 35 samples of either follicular adenoma (FA) or normal thyroid tissue. Samples were reverse‐transcribed and analysed using TaqMan polymerase chain reaction (PCR). TSHr expression was shown to be similar to normal in FA and inversely related to the grade of the majority of thyroid cancers other than MTC, in which, as expected, there was negligible expression. It is concluded that reduced expression of TSHr implies decreased responsiveness to TSH manipulation and is therefore a clinically important prognostic indicator in thyroid cancers. Copyright © 1999 John Wiley & Sons, Ltd.
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- 1999
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19. TSH receptor status of thyroid neoplasmsTaqMan RT-PCR analysis of archival material
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Sheils, Orla M. and Sweeney, Eamon C.
- Abstract
Regulation of thyroid follicular cell proliferation and function is mediated by the interaction of TSH with its receptor (TSHr) on the plasma membrane. While it is recognized clinically that responsiveness of thyroid epithelial tumours to TSH varies with the histological type and grade of neoplasm, the level of TSHr expression in these different tumours has not been quantified hitherto. The aim of this study was to provide this information. Total RNA was extracted from 125 samples of formalin-fixed, paraffin-embedded thyroid tissue comprising 48 papillary (PTC), 29 follicular (FTC), eight anaplastic (ATC), and five medullary thyroid carcinomas (MTC), in addition to 35 samples of either follicular adenoma (FA) or normal thyroid tissue. Samples were reverse-transcribed and analysed using TaqMan polymerase chain reaction (PCR). TSHr expression was shown to be similar to normal in FA and inversely related to the grade of the majority of thyroid cancers other than MTC, in which, as expected, there was negligible expression. It is concluded that reduced expression of TSHr implies decreased responsiveness to TSH manipulation and is therefore a clinically important prognostic indicator in thyroid cancers. Copyright © 1999 John Wiley & Sons, Ltd.
- Published
- 1999
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