1. Class switch recombination of the chicken IgH chain genes: implications for the primordial switch region repeats
- Author
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Shimizu, A., Kitao, H., Arakawa, H., Kuma, K-i., Yamagishi, H., Nakamura, N., Furusawa, S., Matsuda, H., Yasuda, M., and Ekino, S.
- Abstract
In mammals and the amphibian, Xenopus, isotypes of antibodies have been shown to be changed through class switch recombination within the IgH chain gene locus. Here, we identified switch (S) repetitive sequences in the 5′ introns of the Ig Cμ and Cγ genes of the chicken. The Sμ region is composed of two homologous regions, Sμ1 and Sμ2. The Sμ1 region is an upstream 3.7 kb sequence composed of 37 repeats of a consensus sequence containing tandem repeats of the decamer ACCAGTATGG. The Sμ2 region is a downstream 1.4 kb sequence consisting of simple tandem repeats of a decamer CCCAGTACAG. The Sγ region contains repeats of the decamer TATGGGGCAG. Analysis of chicken IgG-producing hybridomas revealed that the Cμ gene was deleted from the chromosome by the recombination occurring between the Sμ and Sγ regions. Recombination breakpoints at the Cμ gene of splenocytes from an immunized chicken were scattered around the Sμ region and two such breakpoints, the precise position of which were determined, were located within possible hairpin loop structures at the palindromic sequence of Sμ1. A primordial palindromic sequence from which the prevalent switch repeat motifs of mammals, chickens and amphibians may have diverged is presented.
- Published
- 2000