1. Understanding the role of PRMT5 in neuroblastoma
- Author
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Albayrak, Gulsah, La Thangue, Nicholas, and Humphrey, Timothy
- Subjects
PRMT5 ,Epigenetics ,Cancer ,Neuroblastoma - Abstract
Neuroblastoma (NB) is a deadly childhood cancer that has an orphan disease status, and the most malignant forms of the tumours have MYCN amplification. There is significant unmet medical need and urgency to develop new treatments for high-risk NB patients, as clinical research on rare diseases of children is very challenging. We revealed that higher PRMT5, MYCN, and E2F1 levels are poor prognostic factors in NB according to their Kaplan-Meier survival plots and then we hypothesized that PRMT5-E2F1-MYCN pathway might have potential prognostic value in NB. We characterized NB cell lines in terms of sensitivity to the PRMT5 inhibition by using genomic and transcriptomic assays in order to gain better insight into the underlying molecular mechanism of sensitivity to PRMT5 inhibition. We used T1-44 compound to inhibit PRMT5 biochemically. We found that MYCN amplified NB cancer cells were significantly more sensitive to the PRMT5 inhibition (p < 0.0062) and T1-44 treatment induced higher number of differentially expressed and alternatively spliced events in the high E2F1/MYCN expressing cell line when compared with the low E2F1/MYCN expressing cell line. We characterized differentially spliced apoptotic genes upon 200 nM treatment with T1-44 for 72 hours as these genes might have a functional impact on cell fate, we found that T1-44 induced differential splicing of apoptosis genes BCL2L11 and CDK10 in MYCN amplified compared with non-MYCN amplified NB cells. Our results highlight the role of the PRMT5, E2F1, and MYCN axis in the alternative splicing pathway and its clinical relevance in MYCN amplified NB patients. MYCN amplification is observed in many other cancer types beyond NB. Therefore, we believe that our findings will also contribute to the targeted therapy efforts in other cancer types as well.
- Published
- 2023