1. Single nuclei RNA-seq of mouse placental labyrinth development
- Author
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Marsh, Bryan and Blelloch, Robert
- Subjects
Biological Sciences ,Bioinformatics and Computational Biology ,Genetics ,Pediatric ,Human Genome ,Stem Cell Research ,2.1 Biological and endogenous factors ,Underpinning research ,1.1 Normal biological development and functioning ,Aetiology ,Animals ,Cell Differentiation ,Chorionic Villi ,Female ,Gene Expression Regulation ,Mice ,Mice ,Inbred C57BL ,Pregnancy ,Sequence Analysis ,RNA ,Single-Cell Analysis ,Transcriptome ,developmental biology ,labyrinth ,mouse ,placenta ,placental development ,single nuclei RNA sequencing ,syncytiotrophoblasts ,Biochemistry and Cell Biology ,Biological sciences ,Biomedical and clinical sciences ,Health sciences - Abstract
The placenta is the interface between mother and fetus in all eutherian species. However, our understanding of this essential organ remains incomplete. A substantial challenge has been the syncytial cells of the placenta, which have made dissociation and independent evaluation of the different cell types of this organ difficult. Here, we address questions concerning the ontogeny, specification, and function of the cell types of a representative hemochorial placenta by performing single nuclei RNA sequencing (snRNA-seq) at multiple stages of mouse embryonic development focusing on the exchange interface, the labyrinth. Timepoints extended from progenitor-driven expansion through terminal differentiation. Analysis by snRNA-seq identified transcript profiles and inferred functions, cell trajectories, signaling interactions, and transcriptional drivers of all but the most highly polyploid cell types of the placenta. These data profile placental development at an unprecedented resolution, provide insights into differentiation and function across time, and provide a resource for future study.
- Published
- 2020