139,653 results on '"Weiß, A"'
Search Results
2. Prevalence of methicillin sensitive and resistant Staphylococcus aureus carriage among German emergency medical providers
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Weiss, Aaron, Kramer, Axel, Taube, Robert, Mattner, Frauke, and Premke, Katrin
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s. aureus carrier ,mrsa carrier ,nasal and throat carriage ,emergency medical services ,personal hygiene ,Medicine ,Public aspects of medicine ,RA1-1270 ,Microbiology ,QR1-502 - Abstract
Background: Health care workers (HCW) in Emergency Medical Services (EMS) frequently come into contact with carriers of methicillin-susceptible (MSSA) and methicillin-resistant (MRSA) strains and may acquire and transmit them to patients. However, there is little data on MSSA and MRSA colonization of medical personnel in the emergency services. Additionally, few studies have analyzed the association between personal hygiene of staff and colonization. Therefore, we examined the prevalence of MSSA and MRSA in EMS staff of two German regions and evaluated their personal hygiene behavior.Method: Throat and nasal swabs from 300 EMS workers were analyzed. Both direct and pre-enriched cultures of the swabs were cultivated on culture media to identify MSSA and MRSA. Results were analyzed together with questionnaires about sociodemographic data and a self-assessment of hygiene behavior. Statistical analysis was done using the R statistical software.Results: Of the total 300 swabs, 55% were from paramedics, 39% were from emergency medical technicians (EMT) and 5% were from emergency physicians. With 1%, the MRSA prevalence was comparable to that of the German population, while the MSSA rate – 43.7% – was higher than expected. Colonization with MSSA was significantly associated with poor hand hygiene and male sex, and was inversely correlated to time on the job in EMS. Conclusion: The sample size of 300 and a MRSA prevalence of 1% made a meaningful analysis of potential influencing factors on the prevalence of MRSA infeasible. The comparatively high prevalence of MSSA and the association with decreasing frequency of hand antisepsis suggests an influence of personal hygiene on MSSA colonization. HCW in EMS should be encouraged to make use of their personal protective equipment and practice frequent hand hygiene. The implementation of diagnostic tools such as the Hand Hygiene Self-Assessment Framework of the WHO could be utilized to reveal problems in organizations, followed by an individual program to promote hand hygiene.
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- 2024
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3. We Are Not One: A History of America's Fight over Israel by Eric Alterman (review)
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Weiss, Amy
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- 2024
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4. Kawaii kokutai: The Militarized Shōjo Body in Contemporary Anime
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Yeo, Yezi and Weiss, Amanda
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- 2022
5. (Not) Looking Back, Looking Forward: Post- and Future Memory in Everywhere at the End of Time
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Weiss, Alexandra
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- 2022
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6. "Here I Am the Undisputed Mistress": Gender Ideology and Garden Theory in Eighteenth-Century Germany
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Weiss, Antonia
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- 2022
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7. History: Made by You: A New Approach from the Southern Oregon Historical Society
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Drake, Amy and Weiss, Allison
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- 2022
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8. Dans l'oeil du désastre: Créer avec Fukushima ed. by Michaël Ferrier (review)
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Weiss, Allen S.
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- 2021
9. School Funding Inequalities in the Texas Panhandle Related to the Racial, Socio-economic, and Linguistic Composition of School Districts
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Weiss, Adam Hobdy
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- 2021
10. Establishing the Early Psychosis Intervention Clinic, New Orleans (EPIC-NOLA): Sustainability Challenges Threaten Clinical Success
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Weiss, Ashley, Chaudhry, Serena, Cahill, John Danie, and Srihari, Vinod H.
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- 2021
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11. Curating in the Age of Live Performance
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Weiss, Allen S.
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- 2020
12. The Effects of Working Memory Training on Working Memory, Self-Regulation, and Analogical Reasoning of Preschool Children
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David Tzuriel, Tammy Weiss, and Gaby Kashy-Rosenbaum
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Background and Aims: This study examined the effects of working memory training (WMT) on WM and fluid intelligence. A novel four-pronged model of mediated learning, cognitive functions, task characteristics and metacognition is presented as a conceptual basis for the Modifiability of a Working Memory Program (MWMP). Our basic assumption is that increasing WM depends on a synchronized combination of the four components. Sample: A group of typically developed preschool children (n = 62) participated in the experimental group, receiving the MWMP. They were compared with a control group (n = 56) of preschool children who engaged in a substitute program. This comparison allowed us to discern the specific effects of the MWMP. Methods: All participants received tests of WM, self-regulation and analogical reasoning before and after the intervention. The MWMP was administered to children in the experimental group for 10 weekly sessions, each lasting 40 minutes, in small groups of two children. The children in the control group engaged in didactic activities that were part of a school curriculum routine for kindergartners for the same length of time. Results: We used ANCOVA analysis to compare the Treatment x Time with age and socioeconomic status as covariates. The findings revealed a higher improvement in some WM and self-regulation tests among children in the experimental group compared to those in the control group. However, no significant transfer effects were observed in analogical thinking. Conclusion: The findings confirm the effectiveness of a non-computerized WMT among kindergartners and support our four-pronged theoretical model. We also discuss earlier findings on far-transfer effects and educational implications. We suggest that future WM studies adopt the following: (1) the development of training methods that are theoretically anchored; (2) training procedures should not rely heavily on computerized exercises but can be adapted to group characteristics, educational settings and cost-effectiveness aspects; (3) varying the task characteristics and training strategies to stimulate task-intrinsic motivation; (4) identifying training strategies to produce cognitive improvements underlying WM; (5) intervention should target individuals in early development as much as possible; (6) development of training procedures that facilitate motivation; and (7) providing empirical evidence of far-transfer effects for WM training. The empirical evidence should link gains in WM capacity and achievements in academic and other life domains.
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- 2024
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13. Hybrid SPEAK OUT! Protocol Improves Aerodynamic Measurements and PROMs in Parkinson's Disease
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Yarden Ashkenazi, Nava Stainer, Lyle Tadmor, Lilach Yaakov, Inbal Friedman, Roni Rips, and Oshrat Sella Weiss
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Background: SPEAK OUT! has been shown to enhance various aspects of voice such as intensity, prosody, voice quality and perception of voice. However, their impacts on expiration and communication effectiveness have not yet been evaluated. This study aimed to evaluate the effectiveness of the Hybrid SPEAK OUT! method on aerodynamic measurements and patient-reported outcome measures (PROMs) in individuals with Parkinson's disease (PD). Methods: This study included 157 participants with PD who underwent an intensive 8-week multidisciplinary treatment program. The Hybrid SPEAK OUT! method consisted of three sessions per week, including two group sessions and one individual treatment session. Voice-related aerodynamic measures included maximum phonation time (MPT), vocal cord function using the S/Z ratio, and expiratory flow measures including peak expiratory flow (PEF) and peak cough flow (PCF). Two PROMs were included: the Hebrew version of the voice handicap index-10 and communication effectiveness questionnaire. Results: The results of 111 participants were analysed. MPT duration increased, PEF and PCF increased, and better scores were found in PROMs. Conclusion: These findings would appear to support the effectiveness of the Hybrid SPEAK OUT! methods improving function, activity and participation in individuals with PD. However, further research is needed.
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- 2024
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14. Multiple Imputation of Partially Observed Covariates in Discrete-Time Survival Analysis
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Anna-Carolina Haensch, Jonathan Bartlett, and Bernd Weiß
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Discrete-time survival analysis (DTSA) models are a popular way of modeling events in the social sciences. However, the analysis of discrete-time survival data is challenged by missing data in one or more covariates. Negative consequences of missing covariate data include efficiency losses and possible bias. A popular approach to circumventing these consequences is multiple imputation (MI). In MI, it is crucial to include outcome information in the imputation models. As there is little guidance on how to incorporate the observed outcome information into the imputation model of missing covariates in DTSA, we explore different existing approaches using fully conditional specification (FCS) MI and substantive-model compatible (SMC)-FCS MI. We extend SMC-FCS for DTSA and provide an implementation in the smcfcs R package. We compare the approaches using Monte Carlo simulations and demonstrate a good performance of the new approach compared to existing approaches.
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- 2024
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15. Mental Health Providers' Perspectives on What Helps and Hinders in Psychotherapy for Autistic Adults with Co-Occurring Mental Health Problems
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Theresa Jubenville-Wood, David B. Nicholas, Jonathan Weiss, and Sharon Cairns
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Autistic adults experience disproportionate rates of co-occurring mental health problems. Psychotherapy has been recognized as an appropriate treatment approach, but evidence is limited. Researchers used a qualitative research paradigm to explore the experiences of mental health providers who provide psychotherapy to autistic adults. The Enhanced Critical Incident Technique was used to interview 13 mental health providers regarding perceptions of facilitating therapy with autistic adults. This research highlights challenges to providing psychotherapy to autistic adults while also illuminating ways that mental health providers have worked to ameliorate such challenges and create positive experiences in therapy. This research also contrasts therapy for autistic adults relative to the general population. Practice recommendations and suggestions for future research are offered.
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- 2024
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16. A 40-week phase 2B randomized, multicenter, double-blind, placebo-controlled study evaluating the safety and efficacy of memantine in amyotrophic lateral sclerosis.
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Bhai, Salman, Levine, Todd, Moore, Dan, Bowser, Robert, Heim, Andrew, Walsh, Maureen, Shibani, Aziz, Simmons, Zachary, Grogan, James, Goyal, Namita, Govindarajan, Raghav, Hussain, Yessar, Papsdorf, Tania, Schwasinger-Schmidt, Tiffany, Olney, Nick, Goslin, Kim, Pulley, Michael, Kasarskis, Edward, Weiss, Michael, Katz, Susan, Moser, Suzan, Jabari, Duaa, Jawdat, Omar, Statland, Jeffrey, Dimachkie, Mazen, and Barohn, Richard
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amyotrophic lateral sclerosis (ALS) ,biomarkers ,memantine ,motor neuron disease (MND) ,neurofilament ,Humans ,Memantine ,Amyotrophic Lateral Sclerosis ,Male ,Female ,Double-Blind Method ,Middle Aged ,Aged ,Adult ,Aged ,80 and over ,Disease Progression ,Treatment Outcome ,Young Adult ,Excitatory Amino Acid Antagonists - Abstract
INTRODUCTION: Amyotrophic lateral sclerosis (ALS) is a rapidly progressive neurodegenerative disease with no known cure, limited treatment options with minimal benefits, and significant unmet need for disease modifying therapies. AIMS: This study investigated memantines impact on ALS progression, with an additional focus on the effects of memantine on cognitive and behavioral changes associated with the disease. METHODS: A randomized, double-blind, placebo-controlled clinical trial was conducted from December 2018 to September 2020. ALS patients were enrolled in-person and remotely across 13 sites in the United States. Participants were randomized to memantine (20 mg twice daily) or placebo in a 2:1 ratio and completed 36 weeks of treatment. The primary outcome of disease progression was assessed by the Revised Amyotrophic Lateral Sclerosis Functional Rating Scale (ALSFRS-R), and blood was collected for biomarker analysis. RESULTS: Of the 99 participants enrolled in the study, 89 were randomized to memantine or placebo (ages 24-83 years, male-to-female ratio ~3:2). Fifty-two participants completed the study treatment with no significant differences in disease progression, biomarker changes (including neurofilament light chain [NfL]), or neuropsychiatric testing noted between the groups. Initial NfL values correlated with the rate of ALSFRS-R decline. DISCUSSION: In this study, memantine did not impact ALS disease progression or neuropsychiatric symptoms. Trials with remote enrollment may help trial participation and success.
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- 2025
17. Prenatal exposure to social adversity and infant cortisol in the first year of life
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Keeton, Victoria F, Hoffmann, Thomas J, Goodwin, Kalisha Moneé, Powell, Bree, Tupuola, Sophia, and Weiss, Sandra J
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Reproductive Medicine ,Biomedical and Clinical Sciences ,Pediatric ,Behavioral and Social Science ,Mental Health ,Conditions Affecting the Embryonic and Fetal Periods ,Perinatal Period - Conditions Originating in Perinatal Period ,Mind and Body ,Violence Research ,Pediatric Research Initiative ,Clinical Research ,2.3 Psychological ,social and economic factors ,Aetiology ,Reproductive health and childbirth ,Good Health and Well Being ,Infant ,Infant ,Newborn ,Pregnancy ,Humans ,Female ,Child ,Hydrocortisone ,Longitudinal Studies ,Prenatal Exposure Delayed Effects ,Hypothalamo-Hypophyseal System ,Social Alienation ,Stress ,Psychological ,Pituitary-Adrenal System ,Saliva ,Social adversity ,infant cortisol ,prenatal stress ,fetal programming ,economic hardship ,biomarkers ,Clinical Sciences ,Neurology & Neurosurgery ,Clinical sciences ,Neurosciences - Abstract
Exposure to social adversity has been associated with cortisol dysregulation during pregnancy and in later childhood; less is known about how prenatal exposure to social stressors affects postnatal cortisol of infants. In a secondary analysis of data from a longitudinal study, we tested whether a pregnant woman's reports of social adversity during the third trimester were associated with their infant's resting cortisol at 1, 6, and 12 months postnatal. Our hypothesis was that prenatal exposure to social adversity would be associated with elevation of infants' cortisol. Measures included prenatal survey reports of social stressors and economic hardship, and resting cortisol levels determined from infant saliva samples acquired at each postnatal timepoint. Data were analyzed using linear mixed effects models. The final sample included 189 women and their infants (46.56% assigned female sex at birth). Prenatal economic hardship was significantly associated with infant cortisol at 6 months postnatal; reports of social stressors were not significantly associated with cortisol at any time point. Factors associated with hardship, such as psychological distress or nutritional deficiencies, may alter fetal HPA axis development, resulting in elevated infant cortisol levels. Developmental changes unique to 6 months of age may explain effects at this timepoint. More work is needed to better comprehend the complex pre- and post-natal physiologic and behavioral factors that affect infant HPA axis development and function, and the modifying role of environmental exposures.
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- 2024
18. 3D genome topology distinguishes molecular subgroups of medulloblastoma.
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Lee, John, Johnston, Michael, Farooq, Hamza, Chen, Huey-Miin, Younes, Subhi, Suarez, Raul, Zwaig, Melissa, Juretic, Nikoleta, Weiss, William, Ragoussis, Jiannis, Jabado, Nada, Taylor, Michael, and Gallo, Marco
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3D genome ,CNS tumor ,Hi-C ,cancer ,medulloblastoma ,transcriptome ,Medulloblastoma ,Humans ,Cerebellar Neoplasms ,DNA Methylation ,Genome ,Human ,Gene Expression Regulation ,Neoplastic ,Transcriptome ,Animals ,Male ,Female ,Mice - Abstract
Four main medulloblastoma (MB) molecular subtypes have been identified based on transcriptional, DNA methylation, and genetic profiles. However, it is currently not known whether 3D genome architecture differs between MB subtypes. To address this question, we performed in situ Hi-C to reconstruct the 3D genome architecture of MB subtypes. In total, we generated Hi-C and matching transcriptome data for 28 surgical specimens and Hi-C data for one patient-derived xenograft. The average resolution of the Hi-C maps was 6,833 bp. Using these data, we found that insulation scores of topologically associating domains (TADs) were effective at distinguishing MB molecular subgroups. TAD insulation score differences between subtypes were globally not associated with differential gene expression, although we identified few exceptions near genes expressed in the lineages of origin of specific MB subtypes. Our study therefore supports the notion that TAD insulation scores can distinguish MB subtypes independently of their transcriptional differences.
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- 2024
19. White paper on light sterile neutrino searches and related phenomenology
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Acero, MA, Argüelles, CA, Hostert, M, Kalra, D, Karagiorgi, G, Kelly, KJ, Littlejohn, BR, Machado, P, Pettus, W, Toups, M, Ross-Lonergan, M, Sousa, A, Surukuchi, PT, Wong, YYY, Abdallah, W, Abdullahi, AM, Akutsu, R, Alvarez-Ruso, L, Alves, DSM, Aurisano, A, Balantekin, AB, Berryman, JM, Bertólez-Martínez, T, Brunner, J, Blennow, M, Bolognesi, S, Borusinski, M, Chen, TY, Cianci, D, Collin, G, Conrad, JM, Crow, B, Denton, PB, Duvall, M, Fernández-Martinez, E, Fong, CS, Foppiani, N, Forero, DV, Friend, M, García-Soto, A, Giganti, C, Giunti, C, Gandhi, R, Ghosh, M, Hardin, J, Heeger, KM, Ishitsuka, M, Izmaylov, A, Jones, BJP, Jordan, JR, Kamp, NW, Katori, T, Kim, SB, Koerner, LW, Lamoureux, M, Lasserre, T, Leach, KG, Learned, J, Li, YF, Link, JM, Louis, WC, Mahn, K, Meyers, PD, Maricic, J, Markoff, D, Maruyama, T, Mertens, S, Minakata, H, Mocioiu, I, Mooney, M, Moulai, MH, Nunokawa, H, Ochoa-Ricoux, JP, Oh, YM, Ohlsson, T, Päs, H, Pershey, D, Robertson, RGH, Rosauro-Alcaraz, S, Rott, C, Roy, S, Salvado, J, Scott, M, Seo, SH, Shaevitz, MH, Smiley, M, Spitz, J, Stachurska, J, Tammaro, M, Thakore, T, Ternes, CA, Thompson, A, Tseng, S, Vogelaar, B, Weiss, T, Wendell, RA, Wilson, RJ, Wright, T, Xin, Z, and Yang, BS
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Nuclear and Plasma Physics ,Particle and High Energy Physics ,Physical Sciences ,Atomic ,Molecular ,Nuclear ,Particle and Plasma Physics ,Nuclear & Particles Physics ,Nuclear and plasma physics ,Particle and high energy physics - Published
- 2024
20. Tissue spaces are reservoirs of antigenic diversity for Trypanosoma brucei.
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Beaver, Alexander, Keneskhanova, Zhibek, Cosentino, Raúl, Weiss, Brian, Awuoche, Erick, Smallenberger, Gretchen, Buenconsejo, Gracyn, Crilly, Nathan, Smith, Jaclyn, Hakim, Jill, Zhang, Bailin, Bobb, Bryce, Rijo Ferreira, Filipa, Figueiredo, Luisa, Aksoy, Serap, Siegel, T, and Mugnier, Monica
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Antigenic Variation ,Animals ,Trypanosoma brucei brucei ,Variant Surface Glycoproteins ,Trypanosoma ,Trypanosomiasis ,African ,Mice ,Female ,Tsetse Flies ,Male ,High-Throughput Nucleotide Sequencing ,Antigens ,Protozoan - Abstract
The protozoan parasite Trypanosoma brucei evades clearance by the host immune system through antigenic variation of its dense variant surface glycoprotein (VSG) coat, periodically switching expression of the VSG using a large genomic repertoire of VSG-encoding genes1-6. Recent studies of antigenic variation in vivo have focused near exclusively on parasites in the bloodstream6-8, but research has shown that many, if not most, parasites reside in the interstitial spaces of tissues9-13. We sought to explore the dynamics of antigenic variation in extravascular parasite populations using VSG-seq7, a high-throughput sequencing approach for profiling VSGs expressed in populations of T. brucei. Here we show that tissues, not the blood, are the primary reservoir of antigenic diversity during both needle- and tsetse bite-initiated T. brucei infections, with more than 75% of VSGs found exclusively within extravascular spaces. We found that this increased diversity is correlated with slower parasite clearance in tissue spaces. Together, these data support a model in which the slower immune response in extravascular spaces provides more time to generate the antigenic diversity needed to maintain a chronic infection. Our findings reveal the important role that extravascular spaces can have in pathogen diversification.
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- 2024
21. Soccer and Vocational Training are Ineffective Delivery Strategies to Prevent HIV and Substance Abuse by Young, South African Men: A Cluster Randomized Controlled Trial
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Rotheram-Borus, Mary Jane, Tomlinson, Mark, Stewart, Jackie, Skiti, Zwelibanzi, Rabie, Stephan, Wang, Jason, Almirol, Ellen, Vogel, Lodewyk, Christodoulou, Joan, and Weiss, Robert E
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Public Health ,Health Sciences ,Substance Misuse ,Prevention ,Behavioral and Social Science ,Infectious Diseases ,Clinical Trials and Supportive Activities ,Mental Health ,Clinical Research ,Social Determinants of Health ,Health Services ,Sexually Transmitted Infections ,HIV/AIDS ,Drug Abuse (NIDA only) ,Good Health and Well Being ,Humans ,Male ,South Africa ,HIV Infections ,Soccer ,Adult ,Substance-Related Disorders ,Young Adult ,Adolescent ,Risk-Taking ,Vocational Education ,Bayes Theorem ,Sexual Behavior ,Risk Reduction Behavior ,Cluster Analysis ,Vocational training ,HIV ,Substance abuse ,Cluster randomized controlled trial ,Young men ,Public Health and Health Services ,Social Work ,Public health - Abstract
HIV and substance abuse are common among young men, associated with a cluster of risk behaviors. Yet, most services addressing these challenges are delivered in setting underutilized by men and are often inconsistent with male identity. This cluster randomized controlled trial aimed to reduce multiple risk behaviors found among young men township areas on the outskirts of Cape Town, South Africa. Young men aged 18-29 years (N = 1193) across 27 neighborhoods were randomized by area to receive HIV-related skills training during either: (1) a 12-month soccer league (SL) intervention; (2) 6-month SL followed by 6 months of vocational training (VT) intervention (SL/VT, n = 9); or 3) a control condition (CC). Bayesian longitudinal mixture models were used to evaluate behaviors over time. Because we targeted multiple outcomes as our primary outcome, we analyzed if the number of significantly different outcomes between conditions exceeded chance for 13 measures over 18 months (with 83%, 76%, and 61% follow-up). Only if there were three significant benefits favoring the SL/VT over the SL would benefits be significant. Outcome measures included substance use, HIV-testing, protective sexual behaviors, violence, community engagement and mental health. Consistent participation in the SL was typically around 45% over time across conditions, however, only 17% of men completed SL/VT. There were no significant differences between conditions over time based on the number of study outcomes. These structural interventions were ineffective in addressing young men's substance abuse and risk for HIV.Clinical Trial Registration: This trial was prospectively registered on 24 November 2014 with ClinicalTrials.gov (NCT02358226).
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- 2024
22. Genetics of Latin American Diversity Project: Insights into population genetics and association studies in admixed groups in the Americas.
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Borda, Victor, Loesch, Douglas, Guo, Bing, Laboulaye, Roland, Veliz-Otani, Diego, French, Jennifer, Leal, Thiago, Gogarten, Stephanie, Ikpe, Sunday, Gouveia, Mateus, Mendes, Marla, Abecasis, Gonçalo, Alvim, Isabela, Arboleda-Bustos, Carlos, Arboleda, Gonzalo, Arboleda, Humberto, Barreto, Mauricio, Barwick, Lucas, Bezzera, Marcos, Blangero, John, Borges, Vanderci, Caceres, Omar, Cai, Jianwen, Chana-Cuevas, Pedro, Chen, Zhanghua, Custer, Brian, Dean, Michael, Dinardo, Carla, Domingos, Igor, Duggirala, Ravindranath, Dieguez, Elena, Fernandez, Willian, Ferraz, Henrique, Gilliland, Frank, Guio, Heinner, Horta, Bernardo, Curran, Joanne, Johnsen, Jill, Kaplan, Robert, Kelly, Shannon, Kenny, Eimear, Konkle, Barbara, Kooperberg, Charles, Lescano, Andres, Lima-Costa, M, Loos, Ruth, Manichaikul, Ani, Meyers, Deborah, Naslavsky, Michel, Nickerson, Deborah, North, Kari, Padilla, Carlos, Preuss, Michael, Raggio, Victor, Reiner, Alexander, Rich, Stephen, Rieder, Carlos, Rienstra, Michiel, Rotter, Jerome, Rundek, Tatjana, Sacco, Ralph, Sanchez, Cesar, Sankaran, Vijay, Santos-Lobato, Bruno, Schumacher-Schuh, Artur, Scliar, Marilia, Silverman, Edwin, Sofer, Tamar, Lasky-Su, Jessica, Tumas, Vitor, Weiss, Scott, Mata, Ignacio, Hernandez, Ryan, Tarazona-Santos, Eduardo, and OConnor, Timothy
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GLAD-match ,GWAS ,Latin America ,identity-by-descent ,imputation ,local ancestry ,migration ,population structure ,Humans ,Latin America ,Genetics ,Population ,Genome-Wide Association Study ,Haplotypes ,Algorithms ,Genetic Variation ,Software - Abstract
Latin Americans are underrepresented in genetic studies, increasing disparities in personalized genomic medicine. Despite available genetic data from thousands of Latin Americans, accessing and navigating the bureaucratic hurdles for consent or access remains challenging. To address this, we introduce the Genetics of Latin American Diversity (GLAD) Project, compiling genome-wide information from 53,738 Latin Americans across 39 studies representing 46 geographical regions. Through GLAD, we identified heterogeneous ancestry composition and recent gene flow across the Americas. Additionally, we developed GLAD-match, a simulated annealing-based algorithm, to match the genetic background of external samples to our database, sharing summary statistics (i.e., allele and haplotype frequencies) without transferring individual-level genotypes. Finally, we demonstrate the potential of GLAD as a critical resource for evaluating statistical genetic software in the presence of admixture. By providing this resource, we promote genomic research in Latin Americans and contribute to the promises of personalized medicine to more people.
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- 2024
23. Sustainability‐Driven Accelerated Shear‐Mediated Immunoassay for Amyotrophic Lateral Sclerosis Detection
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Luo, Xuan, Heydari, Amir, Renfrey, Danielle, Gardner, Zoe, He, Shan, Tang, Youhong, Weiss, Gregory A, Rogers, Mary‐Louise, and Raston, Colin L
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Analytical Chemistry ,Chemical Sciences ,Rare Diseases ,Brain Disorders ,Neurosciences ,ALS ,Neurodegenerative ,4.1 Discovery and preclinical testing of markers and technologies ,Amyotrophic Lateral Sclerosis ,Humans ,Immunoassay ,Limit of Detection ,Biomarkers ,Portable Vortex Fluidic Device ,P-VFD ,immunoassay ,biomarker ,Other Chemical Sciences ,Chemical Engineering ,General Chemistry ,Organic Chemistry ,Macromolecular and materials chemistry ,Organic chemistry ,Chemical engineering - Abstract
Healthcare facilities produce millions of tons of waste annually, with a significant portion consisting of diagnostic plasticware. Here, we introduce a new detection platform that completely replaces traditional assay plates with a piece of membrane, offering a much greener and more sustainable alternative. The membrane, integrated within the portable vortex fluidic device (P-VFD), enables rapid detection of a clinically relevant protein biomarker, urinary p75ECD. This biomarker is utilized to evaluate the prognosis, disease severity, and progression of amyotrophic lateral sclerosis (ALS). This assay has a limit-of-detection (LOD) of 4.03 pg, which is comparable to the plate-based assay (2.24 pg) and has been optimised through a full factorial design of experiments (DOE) and response surface methodology (RSM). P-VFD has great potential in quantifying p75ECD in human biofluids and can significantly reduce the assay time to 5 min compared to the current plate-based p75ECD ELISA assay (3 days), with at least a 4.4-fold reduction in the usage of the detection antibody.
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- 2024
24. Unlocking Solutions: Innovative Approaches to Identifying and Mitigating the Environmental Impacts of Undocumented Orphan Wells in the United States
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O’Malley, Daniel, Delorey, Andrew A, Guiltinan, Eric J, Ma, Zhiwei, Kadeethum, Teeratorn, Lackey, Greg, Lee, James, Santos, Javier E, Follansbee, Emily, Nair, Manoj C, Pekney, Natalie J, Jahan, Ismot, Mehana, Mohamed, Hora, Priya, Carey, J William, Govert, Andrew, Varadharajan, Charuleka, Ciulla, Fabio, Biraud, Sebastien C, Jordan, Preston, Dubey, Mohit, Santos, Andre, Wu, Yuxin, Kneafsey, Timothy J, Dubey, Manvendra K, Weiss, Chester J, Downs, Christine, Boutot, Jade, Kang, Mary, and Viswanathan, Hari
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Earth Sciences ,Geology ,United States ,Water Wells ,Environment ,Environmental Monitoring ,Groundwater ,methane ,climate change ,remote sensing ,machine learning ,magnetometer ,time domainreflectometry ,data mining ,time domain reflectometry ,Environmental Sciences - Abstract
In the United States, hundreds of thousands of undocumented orphan wells have been abandoned, leaving the burden of managing environmental hazards to governmental agencies or the public. These wells, a result of over a century of fossil fuel extraction without adequate regulation, lack basic information like location and depth, emit greenhouse gases, and leak toxic substances into groundwater. For most of these wells, basic information such as well location and depth is unknown or unverified. Addressing this issue necessitates innovative and interdisciplinary approaches for locating, characterizing, and mitigating their environmental impacts. Our survey of the United States revealed the need for tools to identify well locations and assess conditions, prompting the development of technologies including machine learning to automatically extract information from old records (95%+ accuracy), remote sensing technologies like aero-magnetometers to find buried wells, and cost-effective methods for estimating methane emissions. Notably, fixed-wing drones equipped with magnetometers have emerged as cost-effective and efficient for discovering unknown wells, offering advantages over helicopters and quadcopters. Efforts also involved leveraging local knowledge through outreach to state and tribal governments as well as citizen science initiatives. These initiatives aim to significantly contribute to environmental sustainability by reducing greenhouse gases and improving air and water quality.
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- 2024
25. Considerations for widespread implementation of blood-based biomarkers of Alzheimers disease.
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Mielke, Michelle, Anderson, Matthew, Ashford, J, Jeromin, Andreas, Lin, Pei-Jung, Rosen, Allyson, Tyrone, Jamie, Vandevrede, Lawren, Willis, Deanna, Hansson, Oskar, Khachaturian, Ara, Schindler, Suzanne, Weiss, Joan, Batrla, Richard, Bozeat, Sasha, Dwyer, John, Holzapfel, Drew, Jones, Daryl, Murray, James, Partrick, Katherine, Scholler, Emily, Vradenburg, George, Young, Dylan, Braunstein, Joel, Burnham, Samantha, de Oliveira, Fabricio, Hu, Yan, Mattke, Soeren, Merali, Zul, Monane, Mark, Sabbagh, Marwan, Shobin, Eli, Weiner, Michael, and Udeh-Momoh, Chinedu
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Alzheimers disease ,amyloid ,biomarker ,blood‐based biomarkers ,clinical implementation ,clinical practice ,cognitive impairment ,disease‐modifying treatment ,ethics ,patient journey ,primary care ,secondary care ,Humans ,Alzheimer Disease ,Biomarkers ,United States ,Early Diagnosis - Abstract
Diagnosing Alzheimers disease (AD) poses significant challenges to health care, often resulting in delayed or inadequate patient care. The clinical integration of blood-based biomarkers (BBMs) for AD holds promise in enabling early detection of pathology and timely intervention. However, several critical considerations, such as the lack of consistent guidelines for assessing cognition, limited understanding of BBM test characteristics, insufficient evidence on BBM performance across diverse populations, and the ethical management of test results, must be addressed for widespread clinical implementation of BBMs in the United States. The Global CEO Initiative on Alzheimers Disease BBM Workgroup convened to address these challenges and provide recommendations that underscore the importance of evidence-based guidelines, improved training for health-care professionals, patient empowerment through informed decision making, and the necessity of community-based studies to understand BBM performance in real-world populations. Multi-stakeholder engagement is essential to implement these recommendations and ensure credible guidance and education are accessible to all stakeholders.
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- 2024
26. Recommendations for clinical implementation of blood-based biomarkers for Alzheimers disease.
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Mielke, Michelle, Anderson, Matthew, Ashford, J, Jeromin, Andreas, Lin, Pei-Jung, Rosen, Allyson, Tyrone, Jamie, Vandevrede, Lawren, Willis, Deanna, Hansson, Oskar, Khachaturian, Ara, Schindler, Suzanne, Weiss, Joan, Batrla, Richard, Bozeat, Sasha, Dwyer, John, Holzapfel, Drew, Jones, Daryl, Murray, James, Partrick, Katherine, Scholler, Emily, Vradenburg, George, Young, Dylan, Braunstein, Joel, Burnham, Samantha, de Oliveira, Fabricio, Hu, Yan, Mattke, Soeren, Merali, Zul, Monane, Mark, Sabbagh, Marwan, Shobin, Eli, Weiner, Michael, and Udeh-Momoh, Chinedu
- Subjects
Alzheimers disease ,amyloid ,biomarker ,blood‐based biomarkers ,clinical implementation ,clinical practice ,cognitive impairment ,disease‐modifying treatment ,patient journey ,primary care ,secondary care ,Alzheimer Disease ,Humans ,Biomarkers ,Positron-Emission Tomography - Abstract
Blood-based biomarkers (BBM) for Alzheimers disease (AD) are being increasingly used in clinical practice to support an AD diagnosis. In contrast to traditional diagnostic modalities, such as amyloid positron emission tomography and cerebrospinal fluid biomarkers, BBMs offer a more accessible and lower cost alternative for AD biomarker testing. Their unique scalability addresses the anticipated surge in demand for biomarker testing with the emergence of disease-modifying treatments (DMTs) that require confirmation of amyloid pathology. To facilitate the uptake of BBMs in clinical practice, The Global CEO Initiative on Alzheimers Disease convened a BBM Workgroup to provide recommendations for two clinical implementational pathways for BBMs: one for current use for triaging and another for future use to confirm amyloid pathology. These pathways provide a standardized diagnostic approach with guidance on interpreting BBM test results. Integrating BBMs into clinical practice will simplify the diagnostic process and facilitate timely access to DMTs for eligible patients.
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- 2024
27. Factors Associated with Usage of Oral-PrEP among Female Sex Workers in Nairobi, Kenya, Assessed by Self-Report and a Point-of-Care Urine Tenofovir Immunoassay.
- Author
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Shah, Pooja, Spinelli, Matthew, Irungu, Erastus, Kabuti, Rhoda, Ngurukiri, Pauline, Babu, Hellen, Kungu, Mary, Champions, The, Nyabuto, Chrispo, Mahero, Anne, Devries, Karen, Kyegombe, Nambusi, Medley, Graham, Gafos, Mitzy, Seeley, Janet, Weiss, Helen, Kaul, Rupert, Gandhi, Monica, Beattie, Tara, and Kimani, Joshua
- Subjects
Adolescent girls and young women ,Female sex workers ,HIV prevention ,Hierarchical modelling ,Kenya ,PrEP ,Humans ,Female ,Sex Workers ,Kenya ,Pre-Exposure Prophylaxis ,Adult ,HIV Infections ,Tenofovir ,Self Report ,Anti-HIV Agents ,Medication Adherence ,Young Adult ,Adolescent ,Point-of-Care Systems ,Administration ,Oral ,Point-of-Care Testing ,Cross-Sectional Studies ,Social Stigma - Abstract
Pre-exposure prophylaxis (PrEP) is highly effective at reducing HIV acquisition. We aimed to estimate usage of oral-PrEP, and factors associated with adherence among female sex workers (FSWs) in Nairobi, Kenya, using a novel point-of-care urine tenofovir lateral flow assay (LFA). The Maisha Fiti study randomly selected FSWs from Sex Worker Outreach Program clinics in Nairobi. Data were collected from 1003 FSWs from June-October 2019, including surveys on self-reported oral-PrEP adherence. Adherence was also measured using the LFA for HIV-negative FSWs currently taking oral-PrEP. Informed by a social-ecological theoretical framework, we used hierarchical multivariable logistic regression models to estimate associations between individual, interpersonal/community, and structural/institutional-level factors and either self-reported or LFA-assessed adherence. Overall, 746 HIV-negative FSWs aged 18-40 participated in the study, of whom 180 (24.1%) self-reported currently taking oral-PrEP. Of these, 56 (31.1%) were adherent to oral-PrEP as measured by LFA. In the multivariable analyses, associations with currently taking oral-PrEP included having completed secondary education, high alcohol/substance use, feeling empowered to use PrEP, current intimate partner, no recent intimate partner violence, having support from sex worker organisations, experiencing sex work-related stigma, and seeking healthcare services despite stigma. Associations with oral-PrEP LFA-measured adherence measured included having only primary education, experience of childhood emotional violence, belonging to a higher wealth tertile, and being nulliparous. Oral-PrEP adherence, measured by self-report or objectively, is low among FSWs in Nairobi. Programs to improve oral-PrEP usage among FSWs should work to mitigate social and structural barriers and involve collaboration between FSWs, healthcare providers and policymakers.
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- 2024
28. “Making the desert blossom as the rose”: The American Christian Palestine Committee’s “Children’s Memorial Forest” and Postwar Land Acquisition in Palestine
- Author
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Weiss, Amy
- Published
- 2019
29. 1948's Forgotten Soldiers?: The Shifting Reception of American Volunteers in Israel's War of Independence
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Weiss, Amy
- Published
- 2019
30. A Rosenberg by Any Other Name: A History of Jewish Name Change in America ed. by Kirsten Fermaglich (review)
- Author
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Weiss, Amy
- Published
- 2019
31. Task-Based Elementary Spanish in Rural Indiana: A Practice-Based Collaboration
- Author
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Laura Gurzynski-Weiss, Madison Wray, Mackenzie Coulter-Kern, and Johana Bernardo
- Abstract
Spanish is the second most spoken language in the United States and the most taught additional language (L2) in elementary-level schools. However, the amount and type of access differs according to the resources available. Rural settings, which comprise a third of all schools in the US, often have fewer resources and support for the development and maintenance of exposure-track L2 programs, which meet once per week with the goal of, as the name suggests, providing exposure to the L2, rather than a focus on cumulative language development. Given that there are immediate and long-term benefits of even low levels of early bilingualism, ensuring access to quality L2 education is a matter of equity. This paper centers on the first year of a longitudinal collaboration between an exposure-track Spanish language teacher in a rural elementary school, and the research team who created a task-based program tailored for the school following a needs analysis. We analyze the first year of the grant-funded program based on task effectiveness, student enjoyment, and teacher perspectives. We contextualize results within the rural community and offer initial longitudinal data on US exposure-track Spanish. We detail how we adjusted the program for the second year, are freely sharing the materials on the Task Bank (tblt.indiana.edu) and have transferred the program to the teacher's autonomy. Finally, we highlight that the success of this program was and is due to the collaborative nature of the partnership between the teacher, the researchers, and the administrators.
- Published
- 2024
32. Teaching McCarthy's 'All the Pretty Horses' in the (Texas) High School English Classroom
- Author
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Adam Weiss, Jonathan Williams, and Brigette Whaley
- Abstract
The following article recommends Texas high school English teachers to select "All the Pretty Horses" (McCarthy, 1992), the critically acclaimed, best-selling novel by Cormac McCarthy, as a reading option for students. Set in rural Texas and Mexico, "All the Pretty Horses" provides an engaging reading experience that would likely connect to the lives of many Texas high school students. In addition to the rural setting and bilingual dialogues, the novel offers relatable teenage characters with diverse cultural, socioeconomic, and linguistic backgrounds similar to the diverse student populations in Texas schools. The novel also addresses developmentally appropriate themes including independence, identity, and career. Likewise, students with various reading levels will be able to comprehend the text. The present article discusses how "All the Pretty Horses" is an example of a relevant, accessible, and high-interest text for adolescents. In addition, the article provides high school teachers with suggestions for meaningful literacy activities that correspond to Boardman and colleagues' (2008) five central components of adolescent literacy.
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- 2024
33. Patterns of Borrowing for Student Veterans
- Author
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Phillip A. Morris, Jim Burke, and Jen Weiss
- Abstract
This study examined the relationship between individual and institutional characteristics for student veterans who borrow money while enrolled in degree-seeking programs. Using data from the National Postsecondary Student Aid Study (NPSAS 16), we established predictors of borrowing, implications of borrowing, and examined patterns in total aid awarded to this group of students. The accumulation of grant funding, Department of Defense funds, and Veteran's Education Benefits (i.e. GI Bill) contribute to lower levels of borrowing for veterans. However, subgroups of student veterans borrow more than non-veterans, e.g. Asian and Hispanic identifying students. Significant predictors of borrowing included attending for-profit institutions, identifying as Black, and identifying as a woman. Along with these findings, we present implications regarding lending practices, campus support for student veterans, and policy considerations for student veteran aid. [Note: The issue number (1) shown in the article footer on the PDF is incorrect. The correct issue number is 2.]
- Published
- 2024
34. Latent profiles of home behaviour problems in Trinidad and Tobago.
- Author
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Gerstner, Clara-Christina, McDermott, Paul, Weiss, Emily, Rovine, Michael, Worrell, Frank, and Hall, Tracey
- Subjects
Home environment ,Latent profile analysis ,Parent behaviour rating scales ,Person‐centred methods ,Trinidad and Tobago ,Humans ,Trinidad and Tobago ,Male ,Female ,Adolescent ,Child ,Child ,Preschool ,Problem Behavior ,Child Behavior Disorders ,Child Behavior - Abstract
Caregivers who interact with children at home can provide a critical, complementary perspective on a childs behaviour functioning. This research used a parent-administered measure of problem behaviours to study perceptions of child behaviours across home situations. We applied latent profile analysis to identify subgroups of children with common behavioural tendencies in a nationally representative sample (N = 709) of 4- to 13-year-old children in Trinidad and Tobago. This study (a) identified latent profiles of childrens over- and underactive behaviour problems in varied home settings and (b) examined how profile membership predicted academic skills and teacher-observed problem behaviours. The best-fitting four-profile model included one profile of adjusted behaviours (56%), one of the elevated attention-seeking behaviours (21%), a profile featuring withdrawn and disengaged behaviours (15%) and a relatively rare profile emphasising aggressive behaviours (8%). Children classified in the last profile displayed the poorest academic outcomes and the highest levels of teacher-observed behaviour problems.
- Published
- 2025
35. Comparing Interteaching and Discussion Forums in an Asynchronous Online Classroom
- Author
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Sacha K. G. Shaw, Jennifer L. Posey, Thomas Zane, and Mary Jane Weiss
- Abstract
The current study compared the effects of interteaching and discussion forum activities on quiz and assignment scores in a master's-level asynchronous research methods course. In an alternating-treatments design, six participants engaged in interteaching on half of the weeks and in the discussion forum on alternate weeks. Participants in the interteaching condition (M = 96.75) generally scored higher on quizzes than did those in the discussion forum condition (M = 75.95). The results of a paired-sample t test indicated statistically significant differences between the two conditions at p < 0.0001, with a substantial effect size of 0.6760. Significant differences in assignment scores were not observed between the interteaching (M = 87.28) and discussion forum (M = 89.08) conditions. Limitations and directions for future research are discussed.
- Published
- 2024
- Full Text
- View/download PDF
36. Treatment Engagement as a Predictor of Therapy Outcome Following Cognitive Behaviour Therapy for Autistic Children
- Author
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Carly S. Albaum, Teresa Sellitto, Nisha Vashi, Yvonne Bohr, and Jonathan A. Weiss
- Abstract
Purpose: Active engagement in one's therapy is a key contributor to successful outcomes. Research on child engagement in cognitive behaviour therapy (CBT) has largely focused on youth without autism. This longitudinal study examined multiple indicators of child engagement in relation to outcomes for autistic children who took part in CBT for emotion regulation. Method: Data were collected from 60 autistic children who were between 8 and 13 years of age (86.7% male; M[subscript age] = 9.58 years, SD = 1.44 years; 75% White). Indicators of child engagement included independent observer ratings of in-session involvement, as measured by the "Child Involvement Rating Scale", and therapist ratings of the therapeutic relationship and homework completion using single-item measures. Indicators of engagement were measured at early (i.e., first third), middle (i.e., mid third), and late (i.e., final third) stages of treatment. Parent-reported emotion regulation was the primary treatment outcome, as measured by the "Emotion Regulation Checklist." Results: After controlling for pre-treatment scores, in-session involvement significantly predicted some aspects of post-treatment emotion regulation, whereas therapeutic relationship and homework completion did not. Conclusions: Child in-session involvement throughout therapy may be particularly relevant for treatment change. Addressing issues related to in-session involvement early in treatment may help to promote therapeutic success for autistic children.
- Published
- 2024
- Full Text
- View/download PDF
37. How Much Retrieval Ability Is in Originality?
- Author
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Selina Weiss, Benjamin Goecke, and Oliver Wilhelm
- Abstract
Creative fluency and originality are pivotal indicators of creative potential. Both have been embedded in hierarchical intelligence models as part of the ability to retrieve information from long-term memory; an ability that is often measured with indicators of retrieval fluency. Creative fluency and retrieval fluency, both expressed by the count of correct responses, are procedurally highly similar. This raises the question how creative fluency and originality are related with retrieval fluency and how both are predicted by other cognitive abilities. In a multivariate study (N = 320), we found that retrieval fluency is very strongly related with creative fluency (r = 0.87) and substantially related with originality (r = 0.59). A combined fluency factor still fitted the data well. Cognitive abilities accounted for 63% variance in fluency and 47% variance in originality. After controlling for established cognitive abilities, latent variables for fluency and originality were unrelated with one another. This suggests that the procedural proximity of the ability to fluently generate either information from long-term memory or ad-hoc solutions to unusual tasks and the ability to come up with original ideas needs reconsideration. Locating originality below an overarching retrieval factor is contradicted by the present data.
- Published
- 2024
- Full Text
- View/download PDF
38. Comparison of Descriptive Assessment and Trial-Based Functional Analysis as the Basis of Treatment in Homes
- Author
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Lisa M. Tereshko, Mary Jane Weiss, Justin B. Leaf, Thomas Marsh, and George McClure
- Abstract
Effective treatment of challenging behaviors in young children with autism spectrum disorder requires identifying consequences that maintain the behavior under specific environmental circumstances. Assessment strategies help to identify environmental factors setting the occasion for the behaviors to continue to occur. Many studies have used antecedent-behavior-consequence (ABC) data collection strategies, but few have examined its ability to effectively identify the function. Research supports the use of the trial-based functional analysis (TBFA) but few studies examine its effectiveness in the home setting. The current study attempted to answer which assessments might work best in the home setting. Treatment was implemented for each participant based on the results of their assessments. All assessments identified the function of behavior as verified by function-based treatments, but the ABC assessment identified additional functions for three of the participants while the TBFA was more precise. Implications and limitations are reviewed, along with future directions for behavioral assessment in the home.
- Published
- 2024
- Full Text
- View/download PDF
39. Influence of a Brief Autism Education Intervention on Peer Engagement and Inclusion at Mainstream Day Camps: A Mixed-Methods Pilot Study
- Author
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Sandy Thompson-Hodgetts, Ashley McKillop, Mélanie Couture, Stephanie Shire, Jonathan A. Weiss, and Lonnie Zwaigenbaum
- Abstract
To explore the benefits of a brief autism education intervention on peer engagement and inclusion of autistic children at day camps. A convergent, parallel, two-arm (intervention/no intervention), non-randomized, mixed-methods design was used. The individualized, peer-directed, 5--10 min intervention included four components: (1) diagnostic label, (2) description and purpose of unique behaviors, (3) favorite activities and interests, and (4) strategies to engage. A timed-interval behavior-coding system was used to evaluate engagement between each autistic camper and their peers based on videos taken at camp (days 1, 2, 5). Interviews with campers and camp staff explored why changes in targeted outcomes may have occurred. Percent intervals in which the autistic campers were jointly engaged with peers improved in the intervention group (n = 10) and did not change in the control group (n = 5). A large between group intervention effect occurred by day 5 (Z = - 1.942, [eta-squared] = 0.29). Interviews (5 autistic campers, 34 peers, 18 staff) done on the last day of camp in the intervention group garnered three themes: (1) "Changed behavioral attribution," (2) "Knowledge facilitates understanding and engagement," and (3) "(Mis)perceptions of increased inclusion." A brief educational intervention that includes individualized explanatory information and strengths-based strategies might improve peers' understanding of and social engagement with autistic children in community programs such as camps.
- Published
- 2024
- Full Text
- View/download PDF
40. Billy Graham Receives the Ten Commandments: American Jewish Interfaith Relations in the Age of Evangelicalism
- Author
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Weiss, Amy
- Published
- 2019
- Full Text
- View/download PDF
41. "It's Over": Reflexivity in Don Mckellar's Last Night
- Author
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Weiss, Allan and Black, Nicole
- Published
- 2018
42. Truth and Theater
- Author
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Weiss, Aureliu and Friedman, Martin B.
- Published
- 2018
- Full Text
- View/download PDF
43. Mob Scenes: Their Generic Limitations
- Author
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Weiss, Aureliu and Rose, Marilyn Gaddis
- Published
- 2018
- Full Text
- View/download PDF
44. Complementarity for a dynamical black hole
- Author
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Concepcion, Benjamin, Nomura, Yasunori, Ritchie, Kyle, and Weiss, Samuel
- Subjects
Mathematical Physics ,Mathematical Sciences ,Physical Sciences ,Generic health relevance - Abstract
Black hole complementarity posits that the interior of a black hole is not independent from its Hawking radiation. This leads to an apparent violation of causality: the interior can be acausally affected by operators acting solely on the radiation. We argue that this perspective is misleading and that the black hole interior must be viewed as existing in the causal past of the Hawking radiation, despite the fact that they are spacelike separated in the semiclassical description. Consequently, no operation on the Hawking radiation - no matter how complex - can affect the experience of an infalling observer. The black hole interior and the radiation only appear spacelike separated in the semiclassical description because an infalling observer's ability to access complex information is limited; the chaotic dynamics on the horizon, as viewed from the exterior, then converts any effect caused by such an observer to information in the Hawking radiation which cannot be accessed at the semiclassical level. We arrive at the picture described above by considering a unitary exterior description in which the flow of information is strictly causal, which we extend to apply throughout the entire history of black hole evolution, including its formation. This description uses the stretched event horizon as an inner edge of spacetime, on which the information inside is holographically encoded. We argue that the global spacetime picture arises from coarse graining over black hole microstates, and discuss its relationship with the exterior description.
- Published
- 2024
45. In vivo perturb-seq of cancer and microenvironment cells dissects oncologic drivers and radiotherapy responses in glioblastoma.
- Author
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Liu, S, Zou, Christopher, Pak, Joanna, Morse, Alexandra, Pang, Dillon, Casey-Clyde, Timothy, Borah, Ashir, Wu, David, Seo, Kyounghee, OLoughlin, Thomas, Lim, Daniel, Ozawa, Tomoko, Berger, Mitchel, Kamber, Roarke, Weiss, William, Raleigh, David, and Gilbert, Luke
- Subjects
CRISPR ,CRISPRi ,Cancer ,Functional genomics ,GBM ,Glioblastoma ,Microenvironment ,Perturb-seq ,Radiotherapy ,Glioblastoma ,Tumor Microenvironment ,Animals ,Mice ,Humans ,Brain Neoplasms ,Single-Cell Analysis ,Cell Line ,Tumor ,Gene Expression Regulation ,Neoplastic - Abstract
BACKGROUND: Genetic perturbation screens with single-cell readouts have enabled rich phenotyping of gene function and regulatory networks. These approaches have been challenging in vivo, especially in adult disease models such as cancer, which include mixtures of malignant and microenvironment cells. Glioblastoma (GBM) is a fatal cancer, and methods of systematically interrogating gene function and therapeutic targets in vivo, especially in combination with standard of care treatment such as radiotherapy, are lacking. RESULTS: Here, we iteratively develop a multiplex in vivo perturb-seq CRISPRi platform for single-cell genetic screens in cancer and tumor microenvironment cells that leverages intracranial convection enhanced delivery of sgRNA libraries into mouse models of GBM. Our platform enables potent silencing of drivers of in vivo growth and tumor maintenance as well as genes that sensitize GBM to radiotherapy. We find radiotherapy rewires transcriptional responses to genetic perturbations in an in vivo-dependent manner, revealing heterogenous patterns of treatment sensitization or resistance in GBM. Furthermore, we demonstrate targeting of genes that function in the tumor microenvironment, enabling alterations of ligand-receptor interactions between immune and stromal cells following in vivo CRISPRi perturbations that can affect tumor cell phagocytosis. CONCLUSION: In sum, we demonstrate the utility of multiplexed perturb-seq for in vivo single-cell dissection of adult cancer and normal tissue biology across multiple cell types in the context of therapeutic intervention, a platform with potential for broad application.
- Published
- 2024
46. A Practical Guide to 3D Printing for Chemistry and Biology Laboratories
- Author
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Pamidi, Arjun S, Spano, Michael B, and Weiss, Gregory A
- Subjects
Engineering ,Philosophy and Religious Studies ,History and Philosophy Of Specific Fields ,Humans ,Biology ,Chemistry ,Computer-Aided Design ,Laboratories ,Printing ,Three-Dimensional ,Guidelines as Topic ,instrumentation ,labware ,measurements ,open source ,3D printing - Abstract
Three-dimensional (3D) printing promises a revolution in laboratory creativity by enabling rapid prototyping, broader availability of scientific apparatuses, and transformative scientific workflows. We believe all chemistry and biology laboratories should equip themselves with one or more 3D printers and a critical mass of scientists trained to operate them. This overview surveys the techniques, intricacies, and pitfalls associated with 3D printing of functional parts, including measurements, computer-aided design, slicing, limitations of 3D printing, troubleshooting, tips for tricky filaments, and 3D printer maintenance. A flow cells are essential tools in chemistry and biology laboratories, we discuss techniques relevant to the construction of watertight 3D-printed parts. Finally, we articulate a set of principles required for reporting 3D-printed innovations to improve the field's reproducibility and encourage iterative improvements by other scientists. Ideally, authors, peer reviewers, and editors will adopt these principles. We hope these protocols inspire a new generation of publications applying 3D printing in chemistry and biology-especially highly reproducible inventions with the requisite detail and associated documentation. Such reports will facilitate broad adoption and creative iteration of the most innovative designs, thus accelerating discovery in chemistry and biology. © 2024 The Author(s). Current Protocols published by Wiley Periodicals LLC.
- Published
- 2024
47. A call from patient-researchers to advance research on long COVID
- Author
-
Fitzgerald, Megan L, Cohen, Alison K, Jaudon, Toni Wall, Vogel, Julia Moore, Koppes, Abigail N, Santos, Lucia, Robles, Rachel, Lin, Jerry, Davids, JD, McWilliams, Chris, Redfield, Signe, Banks, Kathleen P, Richardson, Maria, Akintonwa, Teresa T Tindle, Pollack, Beth, Spier, Ezra, Weiss, Aimee, Assaf, Gina, Davis, Hannah, and McCorkell, Lisa
- Subjects
Pharmacology and Pharmaceutical Sciences ,Biomedical and Clinical Sciences ,Emerging Infectious Diseases ,Clinical Research ,Infectious Diseases ,Coronaviruses ,Good Health and Well Being ,Humans ,COVID-19 ,SARS-CoV-2 ,Post-Acute COVID-19 Syndrome ,Biomedical Research ,Research Personnel ,long COVID ,patient-led research ,post-acute sequelae of COVID-19 ,Biological Sciences ,Medical and Health Sciences ,Developmental Biology ,Biological sciences ,Biomedical and clinical sciences - Abstract
Long COVID is a chronic and often disabling illness with long-term consequences. Although progress has been made in the clinical characterization of long COVID, no approved treatments exist and disconnects between patients and researchers threaten to hinder future progress. Incorporating patients as active collaborators in long COVID research can bridge the gap and accelerate progress toward treatments and cures.
- Published
- 2024
48. Optimizing Continuous‐Flow Biocatalysis with 3D‐Printing and Inline IR Monitoring
- Author
-
Spano, Michael B, Pamidi, Arjun S, Liu, Maxwell H, Evans, Amanda C, and Weiss, Gregory A
- Subjects
Chemical Engineering ,Engineering ,biocatalysis ,biosynthesis ,continuous-flow ,3D-Printing ,FTIR ,Inorganic Chemistry ,Physical Chemistry (incl. Structural) ,Organic Chemistry ,Chemical engineering - Abstract
Enzymatic biocatalysis typically generates less waste, uses less water, and minimizes energy consumption compared to traditional chemical methods. Efficient, cell-free biosynthesis relies on the reuse of its valuable biocatalysts. Immobilization of enzymes on solid supports, such as enzyme carrier resins (ECRs), offers a reliable and widely deployed approach to maximize enzyme turnover in cell-free biosynthesis. We focus on two major bottlenecks associated with optimizing cell-free biocatalysis. First, we apply our lab's 3D-printed labware to screen ECRs in 96-well mini-reactors to optimize enzyme immobilization conditions. Second, we introduce inline infrared spectroscopy to monitor bioreactor output and maximize enzyme productivity. Urease provides a model system for examining immobilization conditions and continuous assessment of biocatalyst performance. As required for the high substrate concentrations to improve process efficiency and minimize waste, urease was studied in unusually high concentrations of its substrate – molar concentrations of urea. The optimized reactor processed 3.24 L of 4.00 M urea at an average volumetric productivity of 13 g ⋅ L−1 ⋅ h−1 over 18 h and achieved an estimated productivity number of >17.4 kg urea processed per g of immobilized urease Type-IX. This workflow can be generalized to most biocatalytic processes and could accelerate adoption of cell-free biosynthesis for greater chemical sustainability.
- Published
- 2024
49. Catalyst-Free, Three-Component Synthesis of Amidinomaleimides
- Author
-
Swift-Ramirez, Wyatt R, Whalen, Lindsay A, Thompson, Lia K, Shoemaker, Kaylee E, Rubio, Aris V, and Weiss, Gregory A
- Subjects
Organic Chemistry ,Chemical Sciences ,Generic health relevance ,Medicinal and Biomolecular Chemistry ,Medicinal and biomolecular chemistry ,Organic chemistry - Abstract
Maleimide and amidine functionalities often appear in medicinal and natural product targets. We describe a catalyst-free, three-component coupling reaction for the synthesis of amidinomaleimides. This one-pot reaction fuses a broad range of secondary amines and aldehydes with azidomaleimides. The conditions are mild, simple, modular, high yielding, and amenable to aqueous solvents. Most reaction products can be sufficiently purified without column chromatography. The synthesis creates complex, multifunctional molecules with four different molecules, including a tripeptide, arrayed around an amidinomaleimide core.
- Published
- 2024
50. Marr: Egypt at the Crossroads: Domestic Stability and Regional Role
- Author
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Weiss, Kira
- Abstract
Marr: Egypt at the Crossroads: Domestic Stability and Regional Role (Kira Weiss)
- Published
- 2024
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