326 results on '"Ward AC"'
Search Results
2. The SH2 domain-containing protein tyrosine phosphatase SHP-1 is induced by granulocyte colony-stimulating factor (G-CSF) and modulates signaling from the G-CSF receptor
- Author
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Ward, AC, Oomen, SPMA, Smith, L, Gits, J, van Leeuwen, D, Soede-Bobok, AA, Erpelinck-Verschueren, CAJ, Yi, T, and Touw, IP
- Published
- 2000
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3. Regulation of granulopoiesis by transcription factors and cytokine signals
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Ward, AC, Loeb, DM, Soede-Bobok, AA, Touw, IP, and Friedman, AD
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- 2000
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4. Genetic and molecular diagnosis of severe congenital neutropenia.
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Ward AC, Dale DC, Ward, Alister C, and Dale, David C
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- 2009
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5. B Cell Lymphoma 6 (BCL6): A Conserved Regulator of Immunity and Beyond.
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Liongue C, Almohaisen FLJ, and Ward AC
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- Humans, Animals, Lymphoma, Follicular immunology, Lymphoma, Follicular genetics, B-Lymphocytes immunology, B-Lymphocytes metabolism, Lymphoma, Large B-Cell, Diffuse immunology, Lymphoma, Large B-Cell, Diffuse genetics, Lymphoma, Large B-Cell, Diffuse pathology, Proto-Oncogene Proteins c-bcl-6 genetics, Proto-Oncogene Proteins c-bcl-6 metabolism, Germinal Center immunology, Germinal Center metabolism
- Abstract
B cell lymphoma 6 (BCL6) is a conserved multi-domain protein that functions principally as a transcriptional repressor. This protein regulates many pivotal aspects of immune cell development and function. BCL6 is critical for germinal center (GC) formation and the development of high-affinity antibodies, with key roles in the generation and function of GC B cells, follicular helper T (Tfh) cells, follicular regulatory T (Tfr) cells, and various immune memory cells. BCL6 also controls macrophage production and function as well as performing a myriad of additional roles outside of the immune system. Many of these regulatory functions are conserved throughout evolution. The BCL6 gene is also important in human oncology, particularly in diffuse large B cell lymphoma (DLBCL) and follicular lymphoma (FL), but also extending to many in other cancers, including a unique role in resistance to a variety of therapies, which collectively make BCL6 inhibitors highly sought-after.
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- 2024
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6. Zebrafish Suppressor of Cytokine Signaling 4b (Socs4b) Is Dispensable for Development but May Regulate Epidermal Growth Factor Receptor Signaling.
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Trengove M, Rasighaemi P, Liongue C, and Ward AC
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- Animals, Gene Expression Regulation, Developmental, Zebrafish genetics, Zebrafish metabolism, Suppressor of Cytokine Signaling Proteins metabolism, Suppressor of Cytokine Signaling Proteins genetics, Signal Transduction, Zebrafish Proteins genetics, Zebrafish Proteins metabolism, ErbB Receptors metabolism, ErbB Receptors genetics
- Abstract
The suppressor of cytokine signaling (SOCS) family of proteins were named after their defining role as negative feedback regulators of signaling initiated by numerous cytokine receptors. However, multiple members of the SOCS family likely function outside of this paradigm, including SOCS4. Zebrafish possess two SOCS4 paralogues, with socs4a previously shown to participate in central nervous system development and function. This study examined the role of the other paralogue, socs4b , through expression analysis and functional investigations in vivo and in vitro. This revealed maternal deposition of socs4b mRNA, specific zygotic expression during late embryogenesis, including in the brain, eye and intestine, and broad adult expression that was highest in the brain. A mutant allele, socs4bΔ18 , was generated by genome editing, in which the start codon was deleted. Fish homozygous for this likely hypomorphic allele showed no overt developmental phenotypes. However, in vitro studies suggested the Socs4b protein may be able to regulate EGFR signaling.
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- 2024
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7. One Size Does Not Fit All: A Multifaceted Approach to Educate Families about Newborn Screening.
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Raia MH, Lynch MM, Ward AC, Brown JA, Bonhomme NF, and Hunting VL
- Abstract
All families deserve access to readily available, accurate, and relevant information to help them navigate the newborn screening system. Current practices, limited resources, and a siloed newborn screening system create numerous challenges for both providers and families to implement educational opportunities to engage families in ways that meet their needs with relevant and meaningful approaches. Engaging families in newborn screening, especially those from historically underserved communities, is necessary to increase knowledge and confidence which leads to overall improved outcomes for families. This article describes three strategies that the Navigate Newborn Screening Program developed, tested, and implemented in the United States, including online learning modules, a prenatal education pilot program, and social media awareness campaign, as well as the extent to which they were successful in reaching and educating families about newborn screening. Using quality improvement methods and evidence-driven approaches, each of these three strategies demonstrate promising practices for advancing awareness, knowledge, and self-efficacy for families navigating the newborn screening system-particularly families in medically underserved and underrepresented communities. A model for bidirectional engagement of families is outlined to support scaling and implementing promising educational efforts for both providers and families in the newborn screening system.
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- 2024
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8. Janus Kinase 3 (JAK3): A Critical Conserved Node in Immunity Disrupted in Immune Cell Cancer and Immunodeficiency.
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Liongue C, Ratnayake T, Basheer F, and Ward AC
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- Animals, Humans, Janus Kinase 3 metabolism, Signal Transduction, Janus Kinases metabolism, Receptors, Cytokine metabolism, Janus Kinase 1 metabolism, Janus Kinase 2 metabolism, Immunologic Deficiency Syndromes, Neoplasms
- Abstract
The Janus kinase (JAK) family is a small group of protein tyrosine kinases that represent a central component of intracellular signaling downstream from a myriad of cytokine receptors. The JAK3 family member performs a particularly important role in facilitating signal transduction for a key set of cytokine receptors that are essential for immune cell development and function. Mutations that impact JAK3 activity have been identified in a number of human diseases, including somatic gain-of-function (GOF) mutations associated with immune cell malignancies and germline loss-of-function (LOF) mutations associated with immunodeficiency. The structure, function and impacts of both GOF and LOF mutations of JAK3 are highly conserved, making animal models highly informative. This review details the biology of JAK3 and the impact of its perturbation in immune cell-related diseases, including relevant animal studies.
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- 2024
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9. Immune Factors, Immune Cells and Inflammatory Diseases.
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Ward AC
- Subjects
- Immunologic Factors, Adaptive Immunity, Immunity, Innate, Immune System
- Abstract
The immune system comprises distinct innate and adaptive arms, each of which contains many layers to provide a coordinated, sequential immune response to insults [...].
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- 2024
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10. Myeloproliferative Neoplasms: Diseases Mediated by Chronic Activation of Signal Transducer and Activator of Transcription (STAT) Proteins.
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Liongue C and Ward AC
- Abstract
Myeloproliferative neoplasms (MPNs) are hematopoietic diseases characterized by the clonal expansion of single or multiple lineages of differentiated myeloid cells that accumulate in the blood and bone marrow. MPNs are grouped into distinct categories based on key clinical presentations and distinctive mutational hallmarks. These include chronic myeloid leukemia (CML), which is strongly associated with the signature BCR::ABL1 gene translocation, polycythemia vera (PV), essential thrombocythemia (ET), and primary (idiopathic) myelofibrosis (PMF), typically accompanied by molecular alterations in the JAK2 , MPL , or CALR genes. There are also rarer forms such as chronic neutrophilic leukemia (CNL), which involves mutations in the CSF3R gene. However, rather than focusing on the differences between these alternate disease categories, this review aims to present a unifying molecular etiology in which these overlapping diseases are best understood as disruptions of normal hematopoietic signaling: specifically, the chronic activation of signaling pathways, particularly involving signal transducer and activator of transcription (STAT) transcription factors, most notably STAT5B, leading to the sustained stimulation of myelopoiesis, which underpins the various disease sequalae.
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- 2024
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11. Stat3 Regulates Developmental Hematopoiesis and Impacts Myeloid Cell Function via Canonical and Non-Canonical Modalities.
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Sobah ML, Liongue C, and Ward AC
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- Animals, Humans, Myeloid Cells immunology, Myeloid Cells metabolism, Neutrophils immunology, Signal Transduction, CRISPR-Cas Systems, Granulocyte Colony-Stimulating Factor metabolism, Granulocyte Colony-Stimulating Factor genetics, Gene Editing, Lipopolysaccharides, Hematopoietic Stem Cells, Zebrafish, STAT3 Transcription Factor metabolism, STAT3 Transcription Factor genetics, Hematopoiesis genetics, Zebrafish Proteins genetics, Zebrafish Proteins metabolism
- Abstract
Introduction: Signal transducer and activator of transcription (STAT) 3 is extensively involved in the development, homeostasis, and function of immune cells, with STAT3 disruption associated with human immune-related disorders. The roles ascribed to STAT3 have been assumed to be due to its canonical mode of action as an inducible transcription factor downstream of multiple cytokines, although alternative noncanonical functional modalities have also been identified. The relative involvement of each mode was further explored in relevant zebrafish models., Methods: Genome editing with CRISPR/Cas9 was used to generate mutants of the conserved zebrafish Stat3 protein: a loss of function knockout (KO) mutant and a mutant lacking C-terminal sequences including the transactivation domain (ΔTAD). Lines harboring these mutations were analyzed with respect to blood and immune cell development and function in comparison to wild-type zebrafish., Results: The Stat3 KO mutant showed perturbation of hematopoietic lineages throughout primitive and early definitive hematopoiesis. Neutrophil numbers did not increase in response to lipopolysaccharide (LPS) or granulocyte colony-stimulating factor (G-CSF) and their migration was significantly diminished, the latter correlating with abrogation of the Cxcl8b/Cxcr2 pathway, with macrophage responses perturbed. Intriguingly, many of these phenotypes were not shared by the Stat3 ΔTAD mutant. Indeed, only neutrophil and macrophage development were disrupted in these mutants with responsiveness to LPS and G-CSF maintained, and neutrophil migration actually increased., Conclusion: This study has identified roles for zebrafish Stat3 within hematopoietic stem cells impacting multiple lineages throughout primitive and early definitive hematopoiesis, myeloid cell responses to G-CSF and LPS and neutrophil migration. Many of these roles showed conservation, but notably several involved noncanonical modalities, providing additional insights for relevant diseases., (© 2024 The Author(s). Published by S. Karger AG, Basel.)
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- 2024
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12. Contribution of Signal Transducer and Activator of Transcription 3 (STAT3) to Bone Development and Repair.
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Sobah ML, Liongue C, and Ward AC
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- Animals, Humans, Bone Development genetics, Chondrogenesis, Osteogenesis genetics, STAT3 Transcription Factor genetics, Zebrafish genetics
- Abstract
Signal transducer and activator of transcription 3 (STAT3) is a transcription factor activated canonically by numerous cytokines and other factors, with significant roles in immunity, immune diseases, and cancer. It has also been implicated in several human skeletal disorders, with loss-of-function (LOF) mutations associated with aberrant skeletal development. To gain further insights, two zebrafish STAT3 lines were investigated: a complete LOF knockout (KO) mutant and a partial LOF mutant with the transactivation domain truncated (ΔTAD). Consistent with other studies, the KO mutants were smaller, with reduced length in early embryos exacerbated by a decreased growth rate from 5 days postfertilization (dpf). They displayed skeletal deformities that approached 80% incidence by 30 dpf, with a significant reduction in early bone but not cartilage formation. Further analysis additionally identified considerable abrogation of caudal fin regeneration, concomitant with a paucity of infiltrating macrophages and neutrophils, which may be responsible for this. Most of these phenotypes were also observed in the ΔTAD mutants, indicating that loss of canonical STAT3 signaling was the likely cause. However, the impacts on early bone formation and regeneration were muted in the ΔTAD mutant, suggesting the potential involvement of noncanonical functions in these processes.
- Published
- 2023
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13. Signal Transducer and Activator of Transcription Proteins at the Nexus of Immunodeficiency, Autoimmunity and Cancer.
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Liongue C, Sobah ML, and Ward AC
- Abstract
The signal transducer and activator of transcription (STAT) family of proteins has been demonstrated to perform pivotal roles downstream of a myriad of cytokines, particularly those that control immune cell production and function. This is highlighted by both gain-of-function (GOF) and loss-of-function (LOF) mutations being implicated in various diseases impacting cells of the immune system. These mutations are typically inherited, although somatic GOF mutations are commonly observed in certain immune cell malignancies. This review details the growing appreciation of STAT proteins as a key node linking immunodeficiency, autoimmunity and cancer.
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- 2023
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14. Cish knockout mice exhibit similar outcomes to malaria infection despite altered hematopoietic responses.
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Lakkavaram AL, Maymand S, Naser W, Ward AC, and de Koning-Ward TF
- Abstract
The Cytokine-inducible Src homology 2 domain-containing (CISH) protein is a negative feedback regulator induced by cytokines that play key roles in immunity and erythropoiesis. Single nucleotide polymorphisms (SNPs) in the human CISH gene have been associated with increased susceptibility to severe malaria disease. To directly assess how CISH might influence outcomes in the BALB/c model of malaria anemia, CISH knockout ( Cish
-/- ) mice on this background were infected with Plasmodium berghei and their hematopoietic responses, cytokine production and ability to succumb to severe malaria disease evaluated. Despite basal erythrocytic disruption, upon P. berghei infection, the Cish-/- mice were better able to maintain peripheral blood cell counts, hemoglobin levels and a steady-state pattern of erythroid differentiation compared to wild-type ( Cish+/+ ) mice. Ablation of CISH, however, did not influence the outcome of acute malaria infections in either the BALB/c model or the alternative C57BL/6 model of experimental cerebral malaria, with the kinetics of infection, parasite load, weight loss and cytokine responses being similar between Cish+/+ and Cish-/- mice, and both genotypes succumbed to experimental cerebral malaria within a comparable timeframe., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest. The author(s) declared that they were an editorial board member of Frontiers, at the time of submission. This had no impact on the peer review process and the final decision., (Copyright © 2023 Lakkavaram, Maymand, Naser, Ward and de Koning-Ward.)- Published
- 2023
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15. Role of Cytokine-Inducible SH2 Domain-Containing (CISH) Protein in the Regulation of Erythropoiesis.
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Maymand S, Lakkavaram AL, Naser W, Rasighaemi P, Dlugolenski D, Liongue C, Stambas J, de Koning-Ward TF, and Ward AC
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- Animals, Mice, Anemia genetics, Cytokines, Signal Transduction physiology, src Homology Domains, Erythropoiesis physiology, Suppressor of Cytokine Signaling Proteins metabolism
- Abstract
The cytokine-inducible SH2 domain-containing (CISH) protein was the first member of the suppressor of cytokine signaling (SOCS) family of negative feedback regulators discovered, being identified in vitro as an inducible inhibitor of erythropoietin (EPO) signaling. However, understanding of the physiological role played by CISH in erythropoiesis has remained limited. To directly assess the function of CISH in this context, mice deficient in CISH were characterized with respect to developmental, steady-state, and EPO-induced erythropoiesis. CISH was strongly expressed in the fetal liver, but CISH knockout (KO) mice showed only minor disruption of primitive erythropoiesis. However, adults exhibited mild macrocytic anemia coincident with subtle perturbation particularly of bone marrow erythropoiesis, with EPO-induced erythropoiesis blunted in the bone marrow of KO mice but enhanced in the spleen. Cish was expressed basally in the bone marrow with induction following EPO stimulation in bone marrow and spleen. Overall, this study indicates that CISH participates in the control of both basal and EPO-induced erythropoiesis in vivo.
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- 2023
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16. Analysis of Potential Non-Canonical or Alternate STAT5 Functions in Immune Development and Growth.
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Awasthi N, Ward AC, and Liongue C
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- Animals, Longevity, Obesity, STAT5 Transcription Factor genetics, Zebrafish genetics, Zebrafish Proteins genetics
- Abstract
Background: Signal transducer and activator of transcription (STAT) proteins play key roles in development, growth, and homeostasis. These roles have principally been assigned to their "canonical" function as inducible transcriptional activators acting downstream of cytokines and other factors. However, variant "non-canonical" functions have also been identified. The potential in vivo role for non-canonical STAT functions was investigated in the zebrafish model., Methods: Two zebrafish Stat5.1 mutants were generated using CRISPR/Cas9 that should impact canonical functionality: one with a deleted transactivation domain (ΔTAD) and another with a disrupted tyrosine motif (ΔTM). Immune cell development, growth, and adiposity of these Stat5.1 mutants were assessed in comparison to a Stat5.1 knockout (KO) mutant in which both canonical and non-canonical functions were ablated., Results: Both the ΔTAD and ΔTM mutants showed significantly reduced embryonic T lymphopoiesis, similar to the KO mutant. Additionally, adult ΔTAD and ΔTM mutants displayed a decrease in T cell markers in the kidney, but not as severe as the KO, which also showed T cell disruption in the spleen. Severe growth deficiency and increased adiposity were observed in all mutants, but ΔTAD showed a more modest growth defect whereas ΔTM exhibited more profound impacts on both growth and adiposity, suggesting additional gain-of-function activity., Conclusions: These results indicate that canonical Stat5.1 plays a major role in T cell development and growth throughout the lifespan and non-canonical Stat5.1 functions also contribute to aspects of adult T lymphocyte development and growth, with alternate functions impacting growth and adiposity., Competing Interests: The authors declare no conflict of interest. Given his role as Guest Editor, ACW had no involvement in the peer-review of this article and has no access to information regarding its peer-review. Full responsibility for the editorial process for this article was delegated to Amedeo Amedei., (© 2023 The Author(s). Published by IMR Press.)
- Published
- 2023
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17. The Role of Cytokine-Inducible SH2 Domain-Containing Protein (CISH) in the Regulation of Basal and Cytokine-Mediated Myelopoiesis.
- Author
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Naser W, Maymand S, Dlugolenski D, Basheer F, and Ward AC
- Subjects
- Animals, Mice, Granulocyte-Macrophage Colony-Stimulating Factor metabolism, Myelopoiesis, src Homology Domains, Cytokines, Suppressor of Cytokine Signaling Proteins metabolism
- Abstract
Cytokine-inducible SH2 domain-containing protein (CISH) is a member of the suppressor of cytokine signaling (SOCS) family of negative feedback regulators shown to play crucial roles in lymphoid cell development and function as well as appetite regulation. It has also been implicated in the control of signaling downstream of the receptors for the cytokines granulocyte/macrophage colony-stimulating factor (GM-CSF) and granulocyte colony-stimulating factor (G-CSF) in myeloid cells. To investigate the physiological role of CISH in myelopoiesis, mice deficient in CISH were analyzed basally and in response to administration of these cytokines. CISH knockout (KO) mice possessed basally elevated neutrophils in the blood, bone marrow, and spleen compared to wild-type (WT) mice. During GM-CSF-induced myelopoiesis, the frequency of neutrophils, myeloid dendritic cells (DCs), and CFU-M in the bone marrow was higher in the KO, as were the neutrophils and CFU-G in the spleen. In contrast, no differences were observed between KO and WT mice during G-CSF-induced myelopoiesis apart from an elevated frequency of CFU-G and CFU-M in the spleen. This work has identified a role for CISH in the negative regulation of granulopoiesis, including that mediated by GM-CSF.
- Published
- 2023
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18. Towards direct detection of tetracycline residues in milk with a gold nanostructured electrode.
- Author
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Raykova MR, McGuire K, Peveler WJ, Corrigan DK, Henriquez FL, and Ward AC
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- Animals, Milk chemistry, Ferric Compounds chemistry, Anti-Bacterial Agents chemistry, Tetracyclines analysis, Chelating Agents, Electrodes, Tetracycline analysis, Gold
- Abstract
Tetracycline antibiotics are used extensively in veterinary medicine, but the majority of the administrated dose is eliminated unmodified from the animal through various excretion routes including urine, faeces and milk. In dairy animals, limits on residues secreted in milk are strictly controlled by legislation. Tetracyclines (TCs) have metal chelation properties and form strong complexes with iron ions under acidic conditions. In this study, we exploit this property as a strategy for low cost, rapid electrochemical detection of TC residues. TC-Fe(III) complexes in a ratio of 2:1 were created in acidic conditions (pH 2.0) and electrochemically measured on plasma-treated gold electrodes modified with electrodeposited gold nanostructures. DPV measurements showed a reduction peak for the TC-Fe(III) complex that was observed at 50 mV (vs. Ag/AgCl QRE). The limit of detection in buffer media was calculated to be 345 nM and was responsive to increasing TC concentrations up to 2 mM, added to 1 mM FeCl3. Whole milk samples were processed to remove proteins and then spiked with tetracycline and Fe(III) to explore the specificity and sensitivity in a complex matrix with minimal sample preparation, under these conditions the LoD was 931 nM. These results demonstrate a route towards an easy-to-use sensor system for identification of TC in milk samples taking advantage of the metal chelating properties of this antibiotic class., Competing Interests: The authors have declared that no competing interests exist., (Copyright: © 2023 Raykova et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
- Published
- 2023
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19. Cytokine Receptors in Development, Homeostasis and Disease.
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Ward AC
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- Homeostasis, Receptors, Cytokine, Signal Transduction physiology
- Abstract
This Special Issue represents a collective celebration of the cytokine receptor superfamily and the myriad of functions mediated by these important molecules in development and homeostasis, as well as their disruption in disease [...].
- Published
- 2023
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20. Measuring for primary prevention: An online survey of local community perspectives on family and domestic violence in regional Australia.
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Woods JA, Ward AC, Greville HS, Moran MC, Nattabi B, Martin KE, and Thompson SC
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- Male, Humans, Female, Australia, Gender Identity, Surveys and Questionnaires, Sexual Behavior, Domestic Violence
- Abstract
Background: Family and domestic violence, encompassing diverse behaviours including physical, sexual, emotional and financial abuse, is endemic worldwide and has multiple adverse health and social consequences. Principal drivers include traditional gender values that disempower women. Changing these is a key prevention strategy. In Australia, high-quality national surveys provide data on public perspectives concerning family and domestic violence but may not capture community-level diversity. As part of a project for primary prevention family and domestic violence in outer regional Australia, our aims were to develop and administer a questionnaire-based survey suitable for the local community encompassing knowledge about, attitudes towards, and personal experiences of family and domestic violence, to describe and to investigate the theoretical (factor) structure and local socio-demographic predictors of responses, and to determine the extent to which the survey findings are locally distinctive., Methods: The online community survey for local residents (≥15 years), comprised items on respondents' sociodemographic characteristics plus questions abridged from pre-existing national instruments on knowledge about, attitudes towards, and personal experiences of family and domestic violence. Responses were rake-weighted to correct census-ascertained sample imbalance and investigated using exploratory factor analysis, with sociodemographic predictors determined using multiple linear regression and dominance analysis., Results: Among 914 respondents, males (27.0%), those from age-group extremes, and less-educated persons were underrepresented. Familiarity with diverse family and domestic violence behaviours was high among all subgroups. Poorer knowledge of the FDV behaviour continuum and attitudes supporting traditional gender roles and FDV were disproportionately evident among males, older respondents and those with lower education levels. Both the factor structure of extracted composite measures reflecting community perspectives and sociodemographic predictors of responses generally aligned with patterns evident in national data., Conclusions: Local reinforcement of existing nationwide findings on community understanding of and attitudes towards family and domestic violence provides salience for targeted interventions., Competing Interests: The authors have declared that no competing interests exist., (Copyright: © 2023 Woods et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
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- 2023
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21. A zebrafish model of growth hormone insensitivity syndrome with immune dysregulation 1 (GHISID1).
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Heidary S, Awasthi N, Page N, Allnutt T, Lewis RS, Liongue C, and Ward AC
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- Animals, Humans, STAT5 Transcription Factor genetics, Mutation, Growth Hormone genetics, Zebrafish genetics, Laron Syndrome genetics
- Abstract
Signal transducer and activator of transcription (STAT) proteins act downstream of cytokine receptors to facilitate changes in gene expression that impact a range of developmental and homeostatic processes. Patients harbouring loss-of-function (LOF) STAT5B mutations exhibit postnatal growth failure due to lack of responsiveness to growth hormone as well as immune perturbation, a disorder called growth hormone insensitivity syndrome with immune dysregulation 1 (GHISID1). This study aimed to generate a zebrafish model of this disease by targeting the stat5.1 gene using CRISPR/Cas9 and characterising the effects on growth and immunity. The zebrafish Stat5.1 mutants were smaller, but exhibited increased adiposity, with concomitant dysregulation of growth and lipid metabolism genes. The mutants also displayed impaired lymphopoiesis with reduced T cells throughout the lifespan, along with broader disruption of the lymphoid compartment in adulthood, including evidence of T cell activation. Collectively, these findings confirm that zebrafish Stat5.1 mutants mimic the clinical impacts of human STAT5B LOF mutations, establishing them as a model of GHISID1., (© 2023. The Author(s).)
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- 2023
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22. Zebrafish: A Relevant Genetic Model for Human Primary Immunodeficiency (PID) Disorders?
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Basheer F, Sertori R, Liongue C, and Ward AC
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- Female, Animals, Humans, Zebrafish genetics, Models, Genetic, Immunologic Deficiency Syndromes genetics, Immunologic Deficiency Syndromes therapy, Primary Immunodeficiency Diseases genetics, Severe Combined Immunodeficiency genetics, Pelvic Inflammatory Disease
- Abstract
Primary immunodeficiency (PID) disorders, also commonly referred to as inborn errors of immunity, are a heterogenous group of human genetic diseases characterized by defects in immune cell development and/or function. Since these disorders are generally uncommon and occur on a variable background profile of potential genetic and environmental modifiers, animal models are critical to provide mechanistic insights as well as to create platforms to underpin therapeutic development. This review aims to review the relevance of zebrafish as an alternative genetic model for PIDs. It provides an overview of the conservation of the zebrafish immune system and details specific examples of zebrafish models for a multitude of specific human PIDs across a range of distinct categories, including severe combined immunodeficiency (SCID), combined immunodeficiency (CID), multi-system immunodeficiency, autoinflammatory disorders, neutropenia and defects in leucocyte mobility and respiratory burst. It also describes some of the diverse applications of these models, particularly in the fields of microbiology, immunology, regenerative biology and oncology.
- Published
- 2023
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23. Socs3b regulates the development and function of innate immune cells in zebrafish.
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Sobah ML, Scott AC, Laird M, Koole C, Liongue C, and Ward AC
- Subjects
- Animals, Signal Transduction, Macrophages, Immunity, Innate, Zebrafish, Suppressor of Cytokine Signaling Proteins metabolism
- Abstract
Introduction: Suppressor of cytokine signaling 3 (SOCS3) is a critical component of the negative feedback regulation that controls signaling by cytokines and other factors thereby ensuring that important processes such as hematopoiesis and inflammation occur at appropriate levels., Methods: To gain further insights into SOCS3 function, the zebrafish socs3b gene was investigated through analysis of a knockout line generated using CRISPR/Cas9-mediated genome editing., Results: Zebrafish socs3b knockout embryos displayed elevated numbers of neutrophils during primitive and definitive hematopoiesis but macrophage numbers were not altered. However, the absence of socs3b reduced neutrophil functionality but enhanced macrophage responses. Adult socs3b knockout zebrafish displayed reduced survival that correlated with an eye pathology involving extensive infiltration of neutrophils and macrophages along with immune cell dysregulation in other tissues., Discussion: These findings identify a conserved role for Socs3b in the regulation of neutrophil production and macrophage activation., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Sobah, Scott, Laird, Koole, Liongue and Ward.)
- Published
- 2023
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24. Leukemia-associated truncation of granulocyte colony-stimulating factor receptor impacts granulopoiesis throughout the life-course.
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Bulleeraz V, Goy M, Basheer F, Liongue C, and Ward AC
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- Animals, Leukemia, Myeloid, Acute genetics, Leukopoiesis genetics, Zebrafish, Hematopoiesis genetics, Receptors, Granulocyte Colony-Stimulating Factor genetics
- Abstract
Introduction: The granulocyte colony-stimulating factor receptor (G-CSFR), encoded by the CSF3R gene, is involved in the production and function of neutrophilic granulocytes. Somatic mutations in CSF3R leading to truncated G-CSFR forms are observed in acute myeloid leukemia (AML), particularly those subsequent to severe chronic neutropenia (SCN), as well as in a subset of patients with other leukemias., Methods: This investigation introduced equivalent mutations into the zebrafish csf3r gene via genome editing and used a range of molecular and cellular techniques to understand the impact of these mutations on immune cells across the lifespan., Results: Zebrafish harboring truncated G-CSFRs showed significantly enhanced neutrophil production throughout successive waves of embryonic hematopoiesis and a neutrophil maturation defect in adults, with the mutations acting in a partially dominant manner., Discussion: This study has elucidated new insights into the impact of G-CSFR truncations throughout the life-course and created a bone fide zebrafish model for further investigation., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Bulleeraz, Goy, Basheer, Liongue and Ward.)
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- 2023
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25. Caring for Atypical Wounds in Patients With Severe Obesity: A Case Series.
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Ciabattoni M, Ward AC, and Preston AM
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- Humans, Obesity complications, Obesity epidemiology, Patients, Chronic Disease, Obesity, Morbid complications
- Abstract
Background: The prevalence of obesity has grown over the past several decades. It exerts a negative effect on multiple body systems, including the integumentary system, and it increases the risk for development of chronic diseases. Caring for hospitalized patients with severe obesity presents unique challenges, especially when wounds are present., Cases: This article reviews 3 patients with severe obesity hospitalized with extensive full-thickness lower extremity wounds. In all 3 cases, the wounds were comparable to the presentation and evolution of a typical deep tissue pressure injury. In addition, none of the wounds were classified as pressure injuries. These extensive wounds seen in patients with severe obesity lack a clear etiology and pathophysiology, but present wound care nurses and other care providers with unique challenges well beyond evidence-based principles for selection of appropriate topical care., Conclusion: These cases illustrate lessons learned when caring for 3 patients during several months of hospitalization at a large academic medical center. Additional research is needed to enhance our knowledge of the etiology of these wounds, especially since the population of patients with severe obesity has become more prevalent., Competing Interests: The authors declare no conflict of interest., (Copyright © 2022 by the Wound, Ostomy and Continence Nurses Society.)
- Published
- 2023
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26. B cell lymphoma 6A regulates immune development and function in zebrafish.
- Author
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Almohaisen FLJ, Heidary S, Sobah ML, Ward AC, and Liongue C
- Subjects
- Animals, Humans, Macrophages, Mesoderm, Transcription Factors metabolism, Lymphoma, B-Cell, Zebrafish genetics
- Abstract
BCL6A is a transcriptional repressor implicated in the development and survival of B and T lymphoctyes, which is also highly expressed in many non-Hodgkin's lymphomas, such as diffuse large B cell lymphoma and follicular lymphoma. Roles in other cell types, including macrophages and non-hematopoietic cells, have also been suggested but require further investigation. This study sought to identify and characterize zebrafish BCL6A and investigate its role in immune cell development and function, with a focus on early macrophages. Bioinformatics analysis identified a homologue for BCL6A ( bcl6aa ), as well as an additional fish-specific duplicate ( bcl6ab ) and a homologue for the closely-related BCL6B ( bcl6b ). The human BCL6A and zebrafish Bcl6aa proteins were highly conserved across the constituent BTB/POZ, PEST and zinc finger domains. Expression of bcl6aa during early zebrafish embryogenesis was observed in the lateral plate mesoderm, a site of early myeloid cell development, with later expression seen in the brain, eye and thymus. Homozygous bcl6aa mutants developed normally until around 14 days post fertilization (dpf), after which their subsequent growth and maturation was severely impacted along with their relative survival, with heterozygous bcl6aa mutants showing an intermediate phenotype. Analysis of immune cell development revealed significantly decreased lymphoid and macrophage cells in both homozygous and heterozygous bcl6aa mutants, being exacerbated in homozygous mutants. In contrast, the number of neutrophils was unaffected. Only the homozygous bcl6aa mutants showed decreased macrophage mobility in response to wounding and reduced ability to contain bacterial infection. Collectively, this suggests strong conservation of BCL6A across evolution, including a role in macrophage biology., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Almohaisen, Heidary, Sobah, Ward and Liongue.)
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- 2022
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27. Zebrafish Model of Severe Combined Immunodeficiency (SCID) Due to JAK3 Mutation.
- Author
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Basheer F, Lee E, Liongue C, and Ward AC
- Subjects
- Animals, Humans, Adult, Zebrafish genetics, Signal Transduction, Mutation, Receptors, Interleukin-2, Janus Kinase 3 genetics, Severe Combined Immunodeficiency genetics
- Abstract
JAK3 is principally activated by members of the interleukin-2 receptor family and plays an essential role in lymphoid development, with inactivating JAK3 mutations causing autosomal-recessive severe combined immunodeficiency (SCID). This study aimed to generate an equivalent zebrafish model of SCID and to characterize the model across the life-course. Genome editing of zebrafish jak3 created mutants similar to those observed in human SCID. Homozygous jak3 mutants showed reduced embryonic T lymphopoiesis that continued through the larval stage and into adulthood, with B cell maturation and adult NK cells also reduced and neutrophils impacted. Mutant fish were susceptible to lymphoid leukemia. This model has many of the hallmarks of human SCID resulting from inactivating JAK3 mutations and will be useful for a variety of pre-clinical applications.
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- 2022
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28. Phylogenetic and Expression Analysis of Fos Transcription Factors in Zebrafish.
- Author
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Kubra K, Gaddu GK, Liongue C, Heidary S, Ward AC, Dhillon AS, and Basheer F
- Subjects
- Animals, Embryonic Development genetics, Gene Expression Regulation, Developmental, Humans, Phylogeny, Proto-Oncogene Proteins c-fos genetics, Transcription Factors genetics, Zebrafish genetics, Zebrafish Proteins genetics
- Abstract
Members of the FOS protein family regulate gene expression responses to a multitude of extracellular signals and are dysregulated in several pathological states. Whilst mouse genetic models have provided key insights into the tissue-specific functions of these proteins in vivo, little is known about their roles during early vertebrate embryonic development. This study examined the potential of using zebrafish as a model for such studies and, more broadly, for investigating the mechanisms regulating the functions of Fos proteins in vivo. Through phylogenetic and sequence analysis, we identified six zebrafish FOS orthologues, fosaa, fosab, fosb, fosl1a, fosl1b, and fosl2 , which show high conservation in key regulatory domains and post-translational modification sites compared to their equivalent human proteins. During embryogenesis, zebrafish fos genes exhibit both overlapping and distinct spatiotemporal patterns of expression in specific cell types and tissues. Most fos genes are also expressed in a variety of adult zebrafish tissues. As in humans, we also found that expression of zebrafish FOS orthologs is induced by oncogenic BRAF-ERK signalling in zebrafish melanomas. These findings suggest that zebrafish represent an alternate model to mice for investigating the regulation and functions of Fos proteins in vertebrate embryonic and adult tissues, and cancer.
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- 2022
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29. Cytokine Receptor-Like Factor 3 (CRLF3) Contributes to Early Zebrafish Hematopoiesis.
- Author
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Taznin T, Perera K, Gibert Y, Ward AC, and Liongue C
- Subjects
- Animals, Mesoderm, Receptors, Cytokine metabolism, Zebrafish Proteins genetics, Zebrafish Proteins metabolism, Hematopoiesis genetics, Zebrafish genetics
- Abstract
Cytokine receptor-like factor 3 (CRLF3) is an ancient protein conserved across metazoans that contains an archetypal cytokine receptor homology domain (CHD). This domain is found in cytokine receptors present in bilateria, including higher vertebrates, that play key roles in a variety of developmental and homeostatic processes, particularly relating to blood and immune cells. However, understanding of CRLF3 itself remains very limited. This study aimed to investigate this evolutionarily significant protein by studying its embryonic expression and function in early development, particularly of blood and immune cells, using zebrafish as a model. Expression of crlf3 was identified in mesoderm-derived tissues in early zebrafish embryos, including the somitic mesoderm and both anterior and posterior lateral plate mesoderm. Later expression was observed in the thymus, brain, retina and exocrine pancreas. Zebrafish crlf3 mutants generated by genome editing technology exhibited a significant reduction in primitive hematopoiesis and early definitive hematopoiesis, with decreased early progenitors impacting on multiple lineages. No other obvious phenotypes were observed in the crlf3 mutants., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Taznin, Perera, Gibert, Ward and Liongue.)
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- 2022
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30. In vivo impact of JAK3 A573V mutation revealed using zebrafish.
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Basheer F, Bulleeraz V, Ngo VQT, Liongue C, and Ward AC
- Subjects
- Animals, Mutation genetics, Signal Transduction genetics, Zebrafish genetics, Zebrafish metabolism, Janus Kinase 3 genetics, Janus Kinase 3 metabolism, STAT5 Transcription Factor genetics, STAT5 Transcription Factor metabolism
- Abstract
Background: Janus kinase 3 (JAK3) acts downstream of the interleukin-2 (IL-2) receptor family to play a pivotal role in the regulation of lymphoid cell development. Activating JAK3 mutations are associated with a number of lymphoid and other malignancies, with mutations within the regulatory pseudokinase domain common., Methods: The pseudokinase domain mutations A572V and A573V were separately introduced into the highly conserved zebrafish Jak3 and transiently expressed in cell lines and zebrafish embryos to examine their activity and impact on early T cells. Genome editing was subsequently used to introduce the A573V mutation into the zebrafish genome to study the effects of JAK3 activation on lymphoid cells in a physiologically relevant context throughout the life-course., Results: Zebrafish Jak3 A573V produced the strongest activation of downstream STAT5 in vitro and elicited a significant increase in T cells in zebrafish embryos. Zebrafish carrying just a single copy of the Jak3 A573V allele displayed elevated embryonic T cells, which continued into adulthood. Hematopoietic precursors and NK cells were also increased, but not B cells. The lymphoproliferative effects of Jak3 A573V in embryos was shown to be dependent on zebrafish IL-2Rγc, JAK1 and STAT5B equivalents, and could be suppressed with the JAK3 inhibitor Tofacitinib., Conclusions: This study demonstrates that a single JAK3 A573V allele expressed from the endogenous locus was able to enhance lymphopoiesis throughout the life-course, which was mediated via an IL-2Rγc/JAK1/JAK3/STAT5 signaling pathway and was sensitive to Tofacitinib. This extends our understanding of oncogenic JAK3 mutations and creates a novel model to underpin further translational investigations., (© 2022. The Author(s).)
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- 2022
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31. Cytokine-inducible SH2 domain containing protein contributes to regulation of adiposity, food intake, and glucose metabolism.
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Naser W, Maymand S, Rivera LR, Connor T, Liongue C, Smith CM, Aston-Mourney K, McCulloch DR, McGee SL, and Ward AC
- Subjects
- Agouti-Related Protein genetics, Agouti-Related Protein metabolism, Animals, Cytokines metabolism, Eating, Glucose metabolism, Mice, Obesity genetics, Obesity metabolism, Suppressor of Cytokine Signaling Proteins, src Homology Domains, Adiposity, Leptin metabolism
- Abstract
The cytokine-inducible SH2 domain containing protein (CISH) is the founding member of the suppressor of cytokine signaling (SOCS) family of negative feedback regulators and has been shown to be a physiological regulator of signaling in immune cells. This study sought to investigate novel functions for CISH outside of the immune system. Mice deficient in CISH were generated and analyzed using a range of metabolic and other parameters, including in response to a high fat diet and leptin administration. CISH knockout mice possessed decreased body fat and showed resistance to diet-induced obesity. This was associated with reduced food intake, but unaltered energy expenditure and microbiota composition. CISH ablation resulted in reduced basal expression of the orexigenic Agrp gene in the arcuate nucleus (ARC) region of the brain. Cish was basally expressed in the ARC, with evidence of co-expression with the leptin receptor (Lepr) gene in Agrp-positive neurons. CISH-deficient mice also showed enhanced leptin responsiveness, although Cish expression was not itself modulated by leptin. CISH-deficient mice additionally exhibited improved insulin sensitivity on a high-fat diet, but not glucose tolerance despite reduced body weight. These data identify CISH as an important regulator of homeostasis through impacts on appetite control, mediated at least in part by negative regulation of the anorexigenic effects of leptin, and impacts on glucose metabolism., (© 2022 The Authors. The FASEB Journal published by Wiley Periodicals LLC on behalf of Federation of American Societies for Experimental Biology.)
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- 2022
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32. Granulocyte Colony-Stimulating Factor Mediated Regulation of Early Myeloid Cells in Zebrafish.
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Meier AB, Basheer F, Sertori R, Laird M, Liongue C, and Ward AC
- Subjects
- Animals, Granulocyte Colony-Stimulating Factor genetics, Janus Kinases metabolism, Myeloid Cells, Phosphatidylinositol 3-Kinases metabolism, Zebrafish genetics, Zebrafish metabolism
- Abstract
Background: Colony-stimulating factor 3 (CSF3), more commonly known as granulocyte colony-stimulating factor (G-CSF), acts via a specific cell surface receptor CSF3R (or G-CSFR) to regulate hematopoiesis, with a particularly key role in the myeloid cell lineage where it impacts the development and function of neutrophilic granulocytes. Zebrafish possess a conserved CSF3R homologue, Csf3r, which is involved in both steady-state and emergency myelopoiesis, as well as regulating early myeloid cell migration. Two CSF3 proteins have been identified in zebrafish, Csf3a and Csf3b., Methods: This study investigated the roles of the Csf3a and Csf3b ligands as well as the downstream Janus kinase (JAK) and phosphatidylinositol 3-kinase (PI3K) pathways in mediating the effects of Csf3r in early myeloid cell development and function using gene knockdown and pharmacologic approaches., Results: This study revealed that both Csf3a and Csf3b contribute to the developmental and emergency production of early myeloid cells, but Csf3a is responsible for the developmental migration of early neutrophils whereas Csf3b plays the major role in their wounding-induced migration, differentially participated in these responses, as did several downstream signaling pathways. Both JAK and PI3K signaling were required for developmental production and migration of early myeloid cells, but PI3K signaling was required for emergency production and initial migration in response to wounding, while JAK signaling mediated retention at the site of wounding., Conclusions: This study has revealed both distinct and overlapping functions for Csf3a and Csf3b and the downstream JAK and PI3K signaling pathways in early myeloid cell production and function., Competing Interests: The authors declare no conflict of interest., (© 2022 The Author(s). Published by IMR Press.)
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- 2022
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33. The effects of practicing a novel countermeasure on both the semantic and episodic memory-based complex trial protocols.
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Olson JM, Rosenfeld JP, Ward AC, Sitar EJ, Gandhi A, Hernandez J, and Fanesi B
- Subjects
- Humans, Deception, Electroencephalography methods, Event-Related Potentials, P300 physiology, Lie Detection, Reaction Time physiology, Clinical Trial Protocols as Topic, Memory, Episodic, Semantics
- Abstract
This study applied a countermeasure-resistant version of the Concealed Information Test - the Complex Trial Protocol (CTP) - in an information recognition scenario. We replicated and extended the effects of a novel countermeasure developed by Lukács et al., (2016) on both Semantic and Episodic CTPs. We measured participants' response time and P300 event-related potential to rare, crime-relevant probe stimuli, or frequent, non-crime-relevant irrelevant stimuli in two ways: 1) probe vs the average of all irrelevants (PvIall), and 2) probe vs the maximum irrelevant (PvImax). We hypothesized that countermeasure use would only impair information recognition (as indexed by P300) when participants had practiced the countermeasure beforehand. We further hypothesized that recognition of less salient, Episodic information (i.e., jewelry items from a mock crime) would be impaired by countermeasure use more than the recognition of highly salient, Semantic information (i.e., birthdates). Individual diagnostics based on the area under the receiver operating characteristic curve (Semantic CTP: practice n = 22, non-practice n = 23; Episodic CTP: practice n = 19, non-practice n = 18) revealed that the Semantic CTP was affected by the novel countermeasure, but both PvIall and PvImax analyses remained diagnostically useful. The Episodic CTP's performance, however, was reduced to chance, regardless of practice or analysis type. These results are important for both the field of deception detection and the CTP literature. Research on improvements to the Episodic CTP is required., (Copyright © 2022 Elsevier B.V. All rights reserved.)
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- 2022
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34. Generation and Characterization of a Zebrafish IL-2Rγc SCID Model.
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Sertori R, Jones R, Basheer F, Rivera L, Dawson S, Loke S, Heidary S, Dhillon A, Liongue C, and Ward AC
- Subjects
- Amino Acid Sequence, Animals, Base Sequence, Gastrointestinal Microbiome physiology, Interleukin Receptor Common gamma Subunit, Killer Cells, Natural metabolism, Lymphopoiesis physiology, Models, Animal, Phenotype, T-Lymphocytes metabolism, Severe Combined Immunodeficiency metabolism, Zebrafish metabolism
- Abstract
The IL-2 family of cytokines act via receptor complexes that share the interleukin-2 receptor gamma common (IL-2Rγc) chain to play key roles in lymphopoiesis. Inactivating IL-2Rγc mutations results in severe combined immunodeficiency (SCID) in humans and other species. This study sought to generate an equivalent zebrafish SCID model. The zebrafish il2rga gene was targeted for genome editing using TALENs and presumed loss-of-function alleles analyzed with respect to immune cell development and impacts on intestinal microbiota and tumor immunity. Knockout of zebrafish Il-2rγc.a resulted in a SCID phenotype, including a significant reduction in T cells, with NK cells also impacted. This resulted in dysregulated intestinal microbiota and defective immunity to tumor xenotransplants. Collectively, this establishes a useful zebrafish SCID model.
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- 2022
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35. Functional Analysis of Zebrafish socs4a : Impacts on the Notochord and Sensory Function.
- Author
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Trengove M, Wyett R, Liongue C, and Ward AC
- Abstract
The suppressor of cytokine signaling (SOCS) proteins play important roles in cytokine and growth factor signaling, where they act principally as negative feedback regulators, particularly of the downstream signal transducer and activator of transcription (STAT) transcription factors. This critical mode of regulation impacts on both development and homeostasis. However, understanding of the function of SOCS4 remains limited. To address this, we investigated one of the zebrafish SOCS4 paralogues, socs4a , analyzing its expression and the consequences of its ablation. The socs4a gene had a dynamic expression profile during zebrafish embryogenesis, with initial ubiquitous expression becoming restricted to sensory ganglion within the developing nervous system. The knockdown of zebrafish socs4a revealed novel roles in notochord development, as well as the formation of a functional sensory system.
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- 2022
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36. SARS-CoV-2 Aptasensors Based on Electrochemical Impedance Spectroscopy and Low-Cost Gold Electrode Substrates.
- Author
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Lasserre P, Balansethupathy B, Vezza VJ, Butterworth A, Macdonald A, Blair EO, McAteer L, Hannah S, Ward AC, Hoskisson PA, Longmuir A, Setford S, Farmer ECW, Murphy ME, Flynn H, and Corrigan DK
- Subjects
- Dielectric Spectroscopy, Electrodes, Humans, RNA, Viral, Sensitivity and Specificity, Spike Glycoprotein, Coronavirus, COVID-19 diagnosis, SARS-CoV-2 isolation & purification
- Abstract
SARS-CoV-2 diagnostic practices broadly involve either quantitative polymerase chain reaction (qPCR)-based nucleic amplification of viral sequences or antigen-based tests such as lateral flow assays (LFAs). Reverse transcriptase-qPCR can detect viral RNA and is the gold standard for sensitivity. However, the technique is time-consuming and requires expensive laboratory infrastructure and trained staff. LFAs are lower in cost and near real time, and because they are antigen-based, they have the potential to provide a more accurate indication of a disease state. However, LFAs are reported to have low real-world sensitivity and in most cases are only qualitative. Here, an antigen-based electrochemical aptamer sensor is presented, which has the potential to address some of these shortfalls. An aptamer, raised to the SARS-CoV-2 spike protein, was immobilized on a low-cost gold-coated polyester substrate adapted from the blood glucose testing industry. Clinically relevant detection levels for SARS-CoV-2 are achieved in a simple, label-free measurement format using sample incubation times as short as 15 min on nasopharyngeal swab samples. This assay can readily be optimized for mass manufacture and is compatible with a low-cost meter.
- Published
- 2022
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37. STAT proteins: a kaleidoscope of canonical and non-canonical functions in immunity and cancer.
- Author
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Awasthi N, Liongue C, and Ward AC
- Subjects
- Animals, Humans, Immunity, Janus Kinases immunology, Janus Kinases metabolism, Neoplasms metabolism, Phosphorylation, STAT Transcription Factors metabolism, Signal Transduction, Neoplasms immunology, STAT Transcription Factors immunology
- Abstract
STAT proteins represent an important family of evolutionarily conserved transcription factors that play key roles in diverse biological processes, notably including blood and immune cell development and function. Classically, STAT proteins have been viewed as inducible activators of transcription that mediate cellular responses to extracellular signals, particularly cytokines. In this 'canonical' paradigm, latent STAT proteins become tyrosine phosphorylated following receptor activation, typically via downstream JAK proteins, facilitating their dimerization and translocation into the nucleus where they bind to specific sequences in the regulatory region of target genes to activate transcription. However, growing evidence has challenged this paradigm and identified alternate 'non-canonical' functions, such as transcriptional repression and roles outside the nucleus, with both phosphorylated and unphosphorylated STATs involved. This review provides a revised framework for understanding the diverse kaleidoscope of STAT protein functional modalities. It further discusses the implications of this framework for our understanding of STAT proteins in normal blood and immune cell biology and diseases such as cancer, and also provides an evolutionary context to place the origins of these alternative functional modalities., (© 2021. The Author(s).)
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- 2021
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38. ConcrEITS: An Electrical Impedance Interrogator for Concrete Damage Detection Using Self-Sensing Repairs.
- Author
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McAlorum J, Perry M, Ward AC, and Vlachakis C
- Subjects
- Electric Impedance
- Abstract
Concrete infrastructure requires continuous monitoring to ensure any new damage or repair failures are detected promptly. A cost-effective combination of monitoring and maintenance would be highly beneficial in the rehabilitation of existing infrastructure. Alkali-activated materials have been used as concrete repairs and as sensing elements for temperature, moisture, and chlorides. However, damage detection using self-sensing repairs has yet to be demonstrated, and commercial interrogation solutions are expensive. Here, we present the design of a low-cost tomographic impedance interrogator, denoted the "ConcrEITS", capable of crack detection and location in concrete using conductive repair patches. Results show that for pure material blocks ConcrEITS is capable of measuring 4-probe impedance with a root mean square error of ±5.4% when compared to a commercially available device. For tomographic measurements, ConcrEITS is able to detect and locate cracks in patches adhered to small concrete beam samples undergoing 4-point bending. In all six samples tested, crack locations were clearly identified by the contour images gained from tomographic reconstruction. Overall, this system shows promise as a cost-effective combined solution for monitoring and maintenance of concrete infrastructure. We believe further up-scaled testing should follow this research before implementing the technology in a field trial.
- Published
- 2021
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39. SOCS Proteins in Immunity, Inflammatory Diseases, and Immune-Related Cancer.
- Author
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Sobah ML, Liongue C, and Ward AC
- Abstract
Cytokine signaling represents one of the cornerstones of the immune system, mediating the complex responses required to facilitate appropriate immune cell development and function that supports robust immunity. It is crucial that these signals be tightly regulated, with dysregulation underpinning immune defects, including excessive inflammation, as well as contributing to various immune-related malignancies. A specialized family of proteins called suppressors of cytokine signaling (SOCS) participate in negative feedback regulation of cytokine signaling, ensuring it is appropriately restrained. The eight SOCS proteins identified regulate cytokine and other signaling pathways in unique ways. SOCS1-3 and CISH are most closely involved in the regulation of immune-related signaling, influencing processes such polarization of lymphocytes and the activation of myeloid cells by controlling signaling downstream of essential cytokines such as IL-4, IL-6, and IFN-γ. SOCS protein perturbation disrupts these processes resulting in the development of inflammatory and autoimmune conditions as well as malignancies. As a consequence, SOCS proteins are garnering increased interest as a unique avenue to treat these disorders., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Sobah, Liongue and Ward.)
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- 2021
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40. Emerging Electrochemical Sensors for Real-Time Detection of Tetracyclines in Milk.
- Author
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Raykova MR, Corrigan DK, Holdsworth M, Henriquez FL, and Ward AC
- Subjects
- Animals, Anti-Bacterial Agents, Biosensing Techniques, Cattle, Dairying, Drug Residues, Female, Gram-Negative Bacteria, Gram-Positive Bacteria, Humans, Tetracycline, Milk chemistry, Tetracyclines analysis
- Abstract
Antimicrobial drug residues in food are strictly controlled and monitored by national laws in most territories. Tetracyclines are a major broad-spectrum antibiotic class, active against a wide range of Gram-positive and Gram-negative bacteria, and they are the leading choice for the treatment of many conditions in veterinary medicine in recent years. In dairy farms, milk from cows being treated with antibiotic drugs, such as tetracyclines, is considered unfit for human consumption. Contamination of the farm bulk tank with milk containing these residues presents a threat to confidence of supply and results in financial losses to farmers and dairy. Real-time monitoring of milk production for antimicrobial residues could reduce this risk and help to minimise the release of residues into the environment where they can cause reservoirs of antimicrobial resistance. In this article, we review the existing literature for the detection of tetracyclines in cow's milk. Firstly, the complex nature of the milk matrix is described, and the test strategies in commercial use are outlined. Following this, emerging biosensors in the low-cost biosensors field are contrasted against each other, focusing upon electrochemical biosensors. Existing commercial tests that identify antimicrobial residues within milk are largely limited to beta-lactam detection, or non-specific detection of microbial inhibition, with tests specific to tetracycline residues less prevalent. Herein, we review a number of emerging electrochemical biosensor detection strategies for tetracyclines, which have the potential to close this gap and address the industry challenges associated with existing tests.
- Published
- 2021
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41. The endocannabinoid system and retinoic acid signaling combine to influence bone growth.
- Author
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Fraher D, Mann RJ, Dubuisson MJ, Ellis MK, Yu T, Walder K, Ward AC, Winkler C, and Gibert Y
- Subjects
- Animals, Bone Development drug effects, Bone Development genetics, Embryo, Nonmammalian, Gene Expression Regulation, Developmental, Oryzias growth & development, Oryzias metabolism, Osteoclasts cytology, Osteoclasts drug effects, Osteoclasts metabolism, Osteogenesis drug effects, Osteogenesis genetics, Osteonectin genetics, Osteonectin metabolism, Rimonabant pharmacology, Sp7 Transcription Factor genetics, Sp7 Transcription Factor metabolism, Transcription Factors metabolism, Tretinoin pharmacology, Zebrafish growth & development, Zebrafish metabolism, Zebrafish Proteins metabolism, Endocannabinoids metabolism, Oryzias genetics, Signal Transduction genetics, Transcription Factors genetics, Tretinoin metabolism, Zebrafish genetics, Zebrafish Proteins genetics
- Abstract
Osteoporosis is an increasing burden on public health as the world-wide population ages and effective therapeutics are severely needed. Two pathways with high potential for osteoporosis treatment are the retinoic acid (RA) and endocannabinoid system (ECS) signaling pathways. We sought to elucidate the roles that these pathways play in bone development and maturation. Here, we use chemical treatments to modulate the RA and ECS pathways at distinct early, intermediate, and late times bone development in zebrafish. We further assessed osteoclast activity later in zebrafish and medaka. Finally, by combining sub-optimal doses of AR and ECS modulators, we show that enhancing RA signaling or reducing the ECS promote bone formation and decrease osteoclast abundance and activity. These data demonstrate that RA signaling and the ECS can be combined as sub-optimal doses to influence bone growth and may be key targets for potential therapeutics., (Copyright © 2021 Elsevier B.V. All rights reserved.)
- Published
- 2021
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42. Impacts of COVID-19 on agriculture and food systems in Pacific Island countries (PICs): Evidence from communities in Fiji and Solomon Islands.
- Author
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Iese V, Wairiu M, Hickey GM, Ugalde D, Hinge Salili D, Walenenea J Jr, Tabe T, Keremama M, Teva C, Navunicagi O, Fesaitu J, Tigona R, Krishna D, Sachan H, Unwin N, Guell C, Haynes E, Veisa F, Vaike L, Bird Z, Ha'apio M, Roko N, Patolo S, Dean AR, Kiran S, Tikai P, Tuiloma J, Halavatau S, Francis J, and Ward AC
- Abstract
Context: COVID-19 mitigation measures including border lockdowns, social distancing, de-urbanization and restricted movements have been enforced to reduce the risks of COVID-19 arriving and spreading across PICs. To reduce the negative impacts of COVID-19 mitigation measures, governments have put in place a number of interventions to sustain food and income security. Both mitigation measures and interventions have had a number of impacts on agricultural production, food systems and dietary diversity at the national and household levels., Objective: Our paper conducted an exploratory analysis of immediate impacts of both COVID-19 mitigation measures and interventions on households and communities in PICs. Our aim is to better understand the implications of COVID-19 for PICs and identify knowledge gaps requiring further research and policy attention., Methods: To understand the impacts of COVID-19 mitigation measures and interventions on food systems and diets in PICs, 13 communities were studied in Fiji and Solomon Islands in July-August 2020. In these communities, 46 focus group discussions were carried out and 425 households were interviewed. Insights were also derived from a series of online discussion sessions with local experts of Pacific Island food and agricultural systems in August and September 2020. To complement these discussions, an online search was conducted for available literature., Results and Conclusions: Identified impacts include: 1) Reduced agricultural production, food availability and incomes due to a decline in local markets and loss of access to international markets; 2) Increased social conflict such as land disputes, theft of high-value crops and livestock, and environmental degradation resulting from urban-rural migration; 3) Reduced availability of seedlings, planting materials, equipment and labour in urban areas; 4) Reinvigoration of traditional food systems and local food production; and 5) Re -emergence of cultural safety networks and values, such as barter systems. Households in rural and urban communities appear to have responded positively to COVID-19 by increasing food production from home gardens, particularly root crops, vegetables and fruits. However, the limited diversity of agricultural production and decreased household incomes are reducing the already low dietary diversity score that existed pre-COVID-19 for households., Significance: These findings have a number of implications for future policy and practice. Future interventions would benefit from being more inclusive of diverse partners, focusing on strengthening cultural and communal values, and taking a systemic and long-term perspective. COVID-19 has provided an opportunity to strengthen traditional food systems and re-evaluate, re-imagine and re-localize agricultural production strategies and approaches in PICs., Competing Interests: I declare there is no conflict of interest in conducting the research and producing this paper., (© 2021 The Author(s).)
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- 2021
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43. An electrochemical SARS-CoV-2 biosensor inspired by glucose test strip manufacturing processes.
- Author
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Vezza VJ, Butterworth A, Lasserre P, Blair EO, MacDonald A, Hannah S, Rinaldi C, Hoskisson PA, Ward AC, Longmuir A, Setford S, Farmer ECW, Murphy ME, and Corrigan DK
- Subjects
- Angiotensin-Converting Enzyme 2 metabolism, Biosensing Techniques instrumentation, COVID-19 diagnosis, COVID-19 Testing instrumentation, COVID-19 Testing methods, Electrochemical Techniques instrumentation, Electrodes, Enzymes, Immobilized metabolism, Fluorocarbons chemistry, Gold chemistry, Humans, Limit of Detection, SARS-CoV-2 metabolism, Spike Glycoprotein, Coronavirus metabolism, Angiotensin-Converting Enzyme 2 chemistry, Biosensing Techniques methods, Electrochemical Techniques methods, Enzymes, Immobilized chemistry, SARS-CoV-2 isolation & purification
- Abstract
Accurate and rapid diagnostic tests are critical to reducing the impact of SARS-CoV-2. This study presents early, but promising measurements of SARS-CoV-2 using the ACE2 enzyme as the recognition element to achieve clinically relevant detection. The test provides a scalable route to sensitive, specific, rapid and low cost mass testing.
- Published
- 2021
- Full Text
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44. Host-specific symbioses and the microbial prey of a pelagic tunicate (Pyrosoma atlanticum).
- Author
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Thompson AW, Ward AC, Sweeney CP, and Sutherland KR
- Abstract
Pyrosomes are widely distributed pelagic tunicates that have the potential to reshape marine food webs when they bloom. However, their grazing preferences and interactions with the background microbial community are poorly understood. This is the first study of the marine microorganisms associated with pyrosomes undertaken to improve the understanding of pyrosome biology, the impact of pyrosome blooms on marine microbial systems, and microbial symbioses with marine animals. The diversity, relative abundance, and taxonomy of pyrosome-associated microorganisms were compared to seawater during a Pyrosoma atlanticum bloom in the Northern California Current System using high-throughput sequencing of the 16S rRNA gene, microscopy, and flow cytometry. We found that pyrosomes harbor a microbiome distinct from the surrounding seawater, which was dominated by a few novel taxa. In addition to the dominant taxa, numerous more rare pyrosome-specific microbial taxa were recovered. Multiple bioluminescent taxa were present in pyrosomes, which may be a source of the iconic pyrosome luminescence. We also discovered free-living marine microorganisms in association with pyrosomes, suggesting that pyrosome feeding impacts all microbial size classes but preferentially removes larger eukaryotic taxa. This study demonstrates that microbial symbionts and microbial prey are central to pyrosome biology. In addition to pyrosome impacts on higher trophic level marine food webs, the work suggests that pyrosomes also alter marine food webs at the microbial level through feeding and seeding of the marine microbial communities with their symbionts. Future efforts to predict pyrosome blooms, and account for their ecosystem impacts, should consider pyrosome interactions with marine microbial communities., (© 2021. The Author(s).)
- Published
- 2021
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45. The Role of the Metzincin Superfamily in Prostate Cancer Progression: A Systematic-Like Review.
- Author
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Binder MJ and Ward AC
- Subjects
- ADAM Proteins metabolism, ADAMTS Proteins metabolism, Extracellular Matrix physiology, Humans, Male, Matrix Metalloproteinases metabolism, Matrix Metalloproteinases, Membrane-Associated metabolism, Prostate pathology, Tissue Inhibitor of Metalloproteinases metabolism, Metalloproteases metabolism, Metalloproteases physiology, Prostatic Neoplasms metabolism
- Abstract
Prostate cancer remains a leading cause of cancer-related morbidity in men. Potentially important regulators of prostate cancer progression are members of the metzincin superfamily of proteases, principally through their regulation of the extracellular matrix. It is therefore timely to review the role of the metzincin superfamily in prostate cancer and its progression to better understand their involvement in this disease. A systematic-like search strategy was conducted. Articles that investigated the roles of members of the metzincin superfamily and their key regulators in prostate cancer were included. The extracted articles were synthesized and data presented in tabular and narrative forms. Two hundred and five studies met the inclusion criteria. Of these, 138 investigated the role of the Matrix Metalloproteinase (MMP) subgroup, 34 the Membrane-Tethered Matrix Metalloproteinase (MT-MMP) subgroup, 22 the A Disintegrin and Metalloproteinase (ADAM) subgroup, 8 the A Disintegrin and Metalloproteinase with Thrombospondin Motifs (ADAMTS) subgroup and 53 the Tissue Inhibitor of Metalloproteinases (TIMP) family of regulators, noting that several studies investigated multiple family members. There was clear evidence that specific members of the metzincin superfamily are involved in prostate cancer progression, which can be either in a positive or negative manner. However, further understanding of their mechanisms of action and how they may be used as prognostic indicators or molecular targets is required.
- Published
- 2021
- Full Text
- View/download PDF
46. B.2.16 is a non-lethal modifier of the Dark 82 mosaic eye phenotype in Drosophila melanogaster .
- Author
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Vrailas-Mortimer AD, Aggarwal N, Ahmed NN, Alberts IM, Alhawasli M, Aljerdi IA, Allen BM, Alnajar AM, Anderson MA, Armstong R, Avery CC, Avila EJ, Baker TN, Basardeh S, Bates NA, Beidas FN, Bosler AC, Brewer DM, Buenaventura RS, Burrell NJ, Cabrera-Lopez AP, Cervantes-Gonzalez AB, Cezar RP, Coronel J, Croslyn C, Damery KR, Diaz-Alavez L, Dixit NP, Duarte DL, Emke AR, English K, Eshun AA, Esterly SR, Estrada AJ, Feng M, Freund MM, Garcia N, Ghotra CS, Ghyasi H, Hale CS, Hulsman L, Jamerson L, Jones AK, Kuczynski M, Lacey-Kennedy TN, Lee MJ, Mahjoub T, Mersinger MC, Muckerheide AD, Myers DW, Nielsen K, Nosowicz PJ, Nunez JA, Ortiz AC, Patel TT, Perry NN, Poser WSA, Puga DM, Quam C, Quintana-Lopez P, Rennerfeldt P, Reyes NM, Rines IG, Roberts C, Robinson DB, Rossa KM, Ruhlmann GJ, Schmidt J, Sherwood JR, Shonoda DH, Soellner H, Torrez JC, Velide M, Weinzapfel Z, Ward AC, Bieser KL, Merkle JA, Stamm JC, Tillett RL, and Kagey JD
- Abstract
Genetic screens have been used to identify genes involved in the regulation of different biological processes. We identified growth mutants in a Flp/FRT screen using the Drosophila melanogaster eye to identify conditional regulators of cell growth and cell division. One mutant identified from this screen, B.2.16 , was mapped and characterized by researchers in undergraduate genetics labs as part of the Fly-CURE. We find that B.2.16 is a non-lethal genetic modifier of the Dark
82 mosaic eye phenotype., (Copyright: © 2021 by the authors.)- Published
- 2021
- Full Text
- View/download PDF
47. Detection of an unusual G8P[8] rotavirus in a Rotarix-vaccinated child with acute gastroenteritis using Nanopore MinION sequencing: A case report.
- Author
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Kim JH, Yi DY, Lim I, Ward AC, and Kim W
- Subjects
- Abdominal Pain, Acute Disease, Child, Preschool, Dehydration etiology, Diarrhea etiology, Feces virology, Female, Fever etiology, Fluid Therapy methods, Gastroenteritis pathology, Gastroenteritis therapy, Humans, Probiotics therapeutic use, Rotavirus isolation & purification, Rotavirus Infections complications, Rotavirus Infections virology, Severity of Illness Index, Treatment Outcome, Vaccination adverse effects, Vaccines, Attenuated adverse effects, Vomiting etiology, Gastroenteritis virology, Nanopore Sequencing methods, Rotavirus genetics, Rotavirus Infections diagnosis, Rotavirus Vaccines adverse effects
- Abstract
Rationale: Rotavirus is routinely diagnosed by the detection of antigens or the viral genome. However, these tests have limitations, in that they do not detect all rotavirus strains., Patient Concerns: We present a case of a 27-month-old girl who was hospitalized for 4 days with severe gastroenteritis, including high fever, vomiting, diarrhea, mild dehydration, and periumbilical pain. Notably, the patient previously received the Rotarix vaccine., Diagnoses: The laboratory tests were negative for rotavirus, astrovirus, adenovirus, and norovirus as well as common diarrhea-causing bacteria. Human-bovine recombinant rotavirus was detected by MinION sequencing., Interventions: To investigate the cause agents from the unexplained severe gastroenteritis infant, the stool sample was prepared by random amplification for Nanopore MinION sequencing., Outcomes: Treatment through the administration of ORS solution and galtase powder with probiotics was successful after the diagnosis of unusual rotavirus infection., Lessons: This case report is the first detection of an unusual human-bovine recombinant rotavirus in an idiopathic gastroenteritis using Nanopore MinION sequencing.
- Published
- 2020
- Full Text
- View/download PDF
48. Toward a Closed Loop, Integrated Biocompatible Biopolymer Wound Dressing Patch for Detection and Prevention of Chronic Wound Infections.
- Author
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Ward AC, Dubey P, Basnett P, Lika G, Newman G, Corrigan DK, Russell C, Kim J, Chakrabarty S, Connolly P, and Roy I
- Abstract
Chronic wound infections represent a significant burden to healthcare providers globally. Often, chronic wound healing is impeded by the presence of infection within the wound or wound bed. This can result in an increased healing time, healthcare cost and poor patient outcomes. Thus, there is a need for dressings that help the wound heal, in combination with early detection of wound infections to support prompt treatment. In this study, we demonstrate a novel, biocompatible wound dressing material, based on Polyhydroxyalkanoates, doped with graphene platelets, which can be used as an electrochemical sensing substrate for the detection of a common wound pathogen, Pseudomonas aeruginosa . Through the detection of the redox active secondary metabolite, pyocyanin, we demonstrate that a dressing can be produced that will detect the presence of pyocyanin across clinically relevant concentrations. Furthermore, we show that this sensor can be used to identify the presence of pyocyanin in a culture of P. aeruginosa . Overall, the sensor substrate presented in this paper represents the first step toward a new dressing with the capacity to promote wound healing, detect the presence of infection and release antimicrobial drugs, on demand, to optimized healing., (Copyright © 2020 Ward, Dubey, Basnett, Lika, Newman, Corrigan, Russell, Kim, Chakrabarty, Connolly and Roy.)
- Published
- 2020
- Full Text
- View/download PDF
49. ADAMTS-15 Has a Tumor Suppressor Role in Prostate Cancer.
- Author
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Binder MJ, McCoombe S, Williams ED, McCulloch DR, and Ward AC
- Subjects
- ADAMTS Proteins chemistry, ADAMTS Proteins metabolism, Animals, Apoptosis, Catalytic Domain, Cell Line, Tumor, Cell Movement, Cell Proliferation, Male, Mice, Inbred NOD, Mice, SCID, Prostatic Neoplasms metabolism, Prostatic Neoplasms pathology, ADAMTS Proteins genetics, Genes, Tumor Suppressor, Prostatic Neoplasms genetics
- Abstract
Extracellular matrix remodeling has emerged as an important factor in many cancers. Proteoglycans, including versican (VCAN), are regulated via cleavage by the proteolytic actions of A Disintegrin-like And Metalloproteinase domain with Thrombospondin-1 motif (ADAMTS) family members. Alterations in the balance between Proteoglycans and ADAMTS enzymes have been proposed to contribute to cancer progression. Here, we analyzed the expression of ADAMTS-15 in human prostate cancer, and investigated the effects of enforced expression in prostate cancer cell lines. ADAMTS-15 was found to be expressed in human prostate cancer biopsies with evidence of co-localization with VCAN and its bioactive cleavage fragment versikine. Enforced expression of ADAMTS-15, but not a catalytically-inactive version, decreased cell proliferation and migration of the 'castrate-resistant' PC3 prostate cancer cell line in vitro, with survival increased. Analysis of 'androgen-responsive' LNCaP prostate cancer cells in vivo in NOD/SCID mice revealed that ADAMTS-15 expression caused slower growing tumors, which resulted in increased survival. This was not observed in castrated mice or with cells expressing catalytically-inactive ADAMTS-15. Collectively, this research identifies the enzymatic function of ADAMTS-15 as having a tumor suppressor role in prostate cancer, possibly in concert with androgens, and that VCAN represents a likely key substrate, highlighting potential new options for the clinic.
- Published
- 2020
- Full Text
- View/download PDF
50. Acute Plasmodium berghei Mouse Infection Elicits Perturbed Erythropoiesis With Features That Overlap With Anemia of Chronic Disease.
- Author
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Lakkavaram A, Lundie RJ, Do H, Ward AC, and de Koning-Ward TF
- Abstract
Severe malaria anemia is one of the most common causes of morbidity and mortality arising from infection with Plasmodium falciparum . The pathogenesis of malarial anemia is complex, involving both parasite and host factors. As mouse models of malaria also develop anemia, they can provide a useful resource to study the impact of Plasmodium infections and the resulting host innate immune response on erythropoiesis. In this study, we have characterized the bone marrow and splenic responses of the erythroid as well as other hematopoietic lineages after an acute infection of Balb/c mice with Plasmodium berghei. Such characterization of the hematopoietic changes is critical to underpin future studies, using knockout mice and transgenic parasites, to tease out the interplay between host genes and parasite modulators implicated in susceptibility to malaria anemia. P. berghei infection led to a clear perturbation of steady-state erythropoiesis, with the most profound defects in polychromatic and orthochromatic erythroblasts as well as erythroid colony- and burst-forming units (CFU-E and BFU-E), resulting in an inability to compensate for anemia. The perturbation in erythropoiesis was not attributable to parasites infecting erythroblasts and affecting differentiation, nor to insufficient erythropoietin (EPO) production or impaired activation of the Signal transducer and activator of transcription 5 (STAT5) downstream of the EPO receptor, indicating EPO-signaling remained functional in anemia. Instead, the results point to acute anemia in P. berghei -infected mice arising from increased myeloid cell production in order to clear the infection, and the concomitant release of pro-inflammatory cytokines and chemokines from myeloid cells that inhibit erythroid development, in a manner that resembles the pathophysiology of anemia of chronic disease., (Copyright © 2020 Lakkavaram, Lundie, Do, Ward and de Koning-Ward.)
- Published
- 2020
- Full Text
- View/download PDF
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