Search

Antarctic krill (Euphausia superba Dana) is a keystone species in the Southern Ocean ecosystem, with ecological and commercial significance. However, its vulnerability to climate change requires an urgent investigation of its adaptive potential to future environmental conditions. Historical museum collections of krill from the early 20th century represent an ideal opportunity to investigate how krill have changed over time due to predation, fishing and climate change. However, there is currently no cost-effective method for implementing population scale collection genomics for krill given its genome size (48 Gbp). Here, we assessed the utility of two inexpensive methods for population genetics using historical krill samples, specifically low-coverage shotgun sequencing (i.e. 'genome-skimming') and exome capture. Two full-length transcriptomes were generated and used to identify 166 putative gene targets for exome capture bait design. A total of 20 historical krill samples were sequenced using shotgun and exome capture. Mitochondrial and nuclear ribosomal sequences were assembled from both low-coverage shotgun and off-target of exome capture data demonstrating that endogenous DNA sequences could be assembled from historical collections. Although, mitochondrial and ribosomal sequences are variable across individuals from different populations, phylogenetic analysis does not identify any population structure. We find exome capture provides approximately 4500-fold enrichment of sequencing targeted genes, suggesting this approach can generate the sequencing depth required to call identify a significant number of variants. Unlocking historical collections for genomic analyses using exome capture, will provide valuable insights into past and present biodiversity, resilience and adaptability of krill populations to climate change., (© 2024 The Author(s). Molecular Ecology Resources published by John Wiley & Sons Ltd.)

Climate change poses a threat to global food security with extreme heat events causing drought and direct damage to crop plants. However, by altering behavioural or physiological responses of insects, extreme heat events may also affect pollination services on which many crops are dependent. Such effects may potentially be exacerbated by other environmental stresses, such as exposure to widely used agro-chemicals. To determine whether environmental stressors interact to affect pollination services, we carried out field cage experiments on the buff-tailed bumble bee ( Bombus terrestris ). Using a Bayesian approach, we assessed whether heat stress (colonies maintained at an ambient temperature of 25 °C or 31 °C) and insecticide exposure (5 ng g -1 of the neonicotinoid insecticide clothianidin) could induce behavioural changes that affected pollination of faba bean ( Vicia faba ). Only the bumble bee colonies and not the plants were exposed to the environmental stress treatments. Bean plants exposed to heat-stressed bumble bee colonies (31 °C) had a lower proportional pod set compared to colonies maintained at 25 °C. There was also weak evidence that heat stressed colonies caused lower total bean weight. Bee exposure to clothianidin was found to have no clear effect on plant yields, either individually or as part of an interaction. We identified no effect of either colony stressor on bumble bee foraging behaviours. Our results suggest that extreme heat stress at the colony level may impact on pollination services. However, as the effect for other key yield parameters was weaker (e.g. bean yields), our results are not conclusive. Overall, our study highlights the need for further research on how environmental stress affects behavioural interactions in plant-pollinator systems that could impact on crop yields.