38 results on '"Timothy Denison"'
Search Results
2. Evoked resonant neural activity long-term dynamics can be reproduced by a computational model with vesicle depletion
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James J. Sermon, Christoph Wiest, Huiling Tan, Timothy Denison, and Benoit Duchet
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Evoked resonant neural activity ,Deep brain stimulation ,Subthalamic nucleus ,parkinson's disease ,Synaptic vesicle depletion ,Computational modelling ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Subthalamic deep brain stimulation (DBS) robustly generates high-frequency oscillations known as evoked resonant neural activity (ERNA). Recently the importance of ERNA has been demonstrated through its ability to predict the optimal DBS contact in the subthalamic nucleus in patients with Parkinson's disease. However, the underlying mechanisms of ERNA are not well understood, and previous modelling efforts have not managed to reproduce the wealth of published data describing the dynamics of ERNA. Here, we aim to present a minimal model capable of reproducing the characteristics of the slow ERNA dynamics published to date. We make biophysically-motivated modifications to the Kuramoto model and fit its parameters to the slow dynamics of ERNA obtained from data. Our results demonstrate that it is possible to reproduce the slow dynamics of ERNA (over hundreds of seconds) with a single neuronal population, and, crucially, with vesicle depletion as one of the key mechanisms behind the ERNA frequency decay in our model. We further validate the proposed model against experimental data from Parkinson's disease patients, where it captures the variations in ERNA frequency and amplitude in response to variable stimulation frequency, amplitude, and to stimulation pulse bursting. We provide a series of predictions from the model that could be the subject of future studies for further validation.
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- 2024
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3. Multi-night cortico-basal recordings reveal mechanisms of NREM slow-wave suppression and spontaneous awakenings in Parkinson’s disease
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Md Fahim Anjum, Clay Smyth, Rafael Zuzuárregui, Derk Jan Dijk, Philip A. Starr, Timothy Denison, and Simon Little
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Science - Abstract
Abstract Sleep disturbance is a prevalent and disabling comorbidity in Parkinson’s disease (PD). We performed multi-night (n = 57) at-home intracranial recordings from electrocorticography and subcortical electrodes using sensing-enabled Deep Brain Stimulation (DBS), paired with portable polysomnography in four PD participants and one with cervical dystonia (clinical trial: NCT03582891). Cortico-basal activity in delta increased and in beta decreased during NREM (N2 + N3) versus wakefulness in PD. DBS caused further elevation in cortical delta and decrease in alpha and low-beta compared to DBS OFF state. Our primary outcome demonstrated an inverse interaction between subcortical beta and cortical slow-wave during NREM. Our secondary outcome revealed subcortical beta increases prior to spontaneous awakenings in PD. We classified NREM vs. wakefulness with high accuracy in both traditional (30 s: 92.6 ± 1.7%) and rapid (5 s: 88.3 ± 2.1%) data epochs of intracranial signals. Our findings elucidate sleep neurophysiology and impacts of DBS on sleep in PD informing adaptive DBS for sleep dysfunction.
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- 2024
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4. 1:2 entrainment is not a device-induced artefact, except when it is
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James J. Sermon, Moaad Benjaber, Benoit Duchet, Juan Anso, Maria Olaru, Philip A. Starr, and Timothy Denison
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Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Published
- 2024
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5. Pre-existing oscillatory activity as a condition for sub-harmonic entrainment of finely tuned gamma in Parkinson's disease
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James J. Sermon, Philip A. Starr, Timothy Denison, and Benoit Duchet
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Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Published
- 2024
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6. Development and Evaluation of a Real-Time Phase-Triggered Stimulation Algorithm for the CorTec Brain Interchange
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Hanbin Cho, Moaad Benjaber, C. Alexis Gkogkidis, Marina Buchheit, Juan F. Ruiz-Rodriguez, Benjamin L. Grannan, Kurt E. Weaver, Andrew L. Ko, Steven C. Cramer, Jeffrey G. Ojemann, Timothy Denison, and Jeffrey A. Herron
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Feedback ,neurostimulation ,signal processing ,system analysis and design ,Medical technology ,R855-855.5 ,Therapeutics. Pharmacology ,RM1-950 - Abstract
With the development and characterization of biomarkers that may reflect neural network state as well as a patient’s clinical deficits, there is growing interest in more complex stimulation designs. While current implantable neuromodulation systems offer pathways to expand the design and application of adaptive stimulation paradigms, technological drawbacks of these systems limit adaptive neuromodulation exploration. In this paper, we discuss the implementation of a phase-triggered stimulation paradigm using a research platform composed of an investigational system known as the CorTec Brain Interchange (CorTec GmbH, Freiburg, Germany), and an open-source software tool known as OMNI-BIC. We then evaluate the stimulation paradigm’s performance in both benchtop and in vivo human demonstrations. Our findings indicate that the Brain Interchange and OMNI-BIC platform is capable of reliable administration of phase-triggered stimulation and has the potential to help expand investigation within the adaptive neuromodulation design space.
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- 2024
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7. Adaptive Deep Brain Stimulation for sleep stage targeting in Parkinson’s disease
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Clay Smyth, Md Fahim Anjum, Shravanan Ravi, Timothy Denison, Philip Starr, and Simon Little
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Adaptive Deep Brain Stimulation ,Parkinson’s disease ,Sleep ,Real-time neural control ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Background: Sleep dysfunction is disabling in people with Parkinson’s disease and is linked to worse motor and non-motor outcomes. Sleep-specific adaptive Deep Brain Stimulation has the potential to target pathophysiologies of sleep. Objective: Develop an adaptive Deep Brain Stimulation algorithm that modulates stimulation parameters in response to intracranially classified sleep stages. Methods: We performed at-home, multi-night intracranial electrocorticography and polysomnogram recordings to train personalized linear classifiers for discriminating the N3 NREM sleep stage. Classifiers were embedded into investigational Deep Brain Stimulators for N3 specific adaptive DBS. Results: We report high specificity of embedded, autonomous, intracranial electrocorticography N3 sleep stage classification across two participants and provide proof-of-principle of successful sleep stage specific adaptive Deep Brain Stimulation. Conclusion: Multi-night cortico-basal recordings and sleep specific adaptive Deep Brain Stimulation provide an experimental framework to investigate sleep pathophysiology and mechanistic interactions with stimulation, towards the development of therapeutic neurostimulation paradigms directly targeting sleep dysfunction.
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- 2023
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8. Sub-harmonic entrainment of cortical gamma oscillations to deep brain stimulation in Parkinson's disease: Model based predictions and validation in three human subjects
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James J. Sermon, Maria Olaru, Juan Ansó, Stephanie Cernera, Simon Little, Maria Shcherbakova, Rafal Bogacz, Philip A. Starr, Timothy Denison, and Benoit Duchet
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Sub-harmonic entrainment ,Deep brain stimulation ,Cortical gamma oscillations ,Parkinson's disease ,Wilson-Cowan model ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Objectives: The exact mechanisms of deep brain stimulation (DBS) are still an active area of investigation, in spite of its clinical successes. This is due in part to the lack of understanding of the effects of stimulation on neuronal rhythms. Entrainment of brain oscillations has been hypothesised as a potential mechanism of neuromodulation. A better understanding of entrainment might further inform existing methods of continuous DBS, and help refine algorithms for adaptive methods. The purpose of this study is to develop and test a theoretical framework to predict entrainment of cortical rhythms to DBS across a wide range of stimulation parameters. Materials and Methods: We fit a model of interacting neural populations to selected features characterising PD patients' off-stimulation finely-tuned gamma rhythm recorded through electrocorticography. Using the fitted models, we predict basal ganglia DBS parameters that would result in 1:2 entrainment, a special case of sub-harmonic entrainment observed in patients and predicted by theory. Results: We show that the neural circuit models fitted to patient data exhibit 1:2 entrainment when stimulation is provided across a range of stimulation parameters. Furthermore, we verify key features of the region of 1:2 entrainment in the stimulation frequency/amplitude space with follow-up recordings from the same patients, such as the loss of 1:2 entrainment above certain stimulation amplitudes. Conclusion: Our results reveal that continuous, constant frequency DBS in patients may lead to nonlinear patterns of neuronal entrainment across stimulation parameters, and that these responses can be predicted by modelling. Should entrainment prove to be an important mechanism of therapeutic stimulation, our modelling framework may reduce the parameter space that clinicians must consider when programming devices for optimal benefit.
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- 2023
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9. The effect of pulse shape in theta-burst stimulation: Monophasic vs biphasic TMS
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Karen Wendt, Majid Memarian Sorkhabi, Charlotte J. Stagg, Melanie K. Fleming, Timothy Denison, and Jacinta O'Shea
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Transcranial magnetic stimulation (TMS) ,Theta burst stimulation (TBS) ,Pulse-width modulation based TMS ,TMS pulse shape ,Motor plasticity ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Background: Intermittent theta-burst stimulation (i) (TBS) is a transcranial magnetic stimulation (TMS) plasticity protocol. Conventionally, TBS is applied using biphasic pulses due to hardware limitations. However, monophasic pulses are hypothesised to recruit cortical neurons more selectively than biphasic pulses, predicting stronger plasticity effects. Monophasic and biphasic TBS can be generated using a custom-made pulse-width modulation-based TMS device (pTMS). Objective: Using pTMS, we tested the hypothesis that monophasic iTBS would induce a stronger plasticity effect than biphasic, measured as induced increases in motor corticospinal excitability. Methods: In a repeated-measures design, thirty healthy volunteers participated in three separate sessions, where monophasic and biphasic iTBS was applied to the primary motor cortex (M1 condition) or the vertex (control condition). Plasticity was quantified as increases in motor corticospinal excitability after versus before iTBS, by comparing peak-to-peak amplitudes of motor evoked potentials (MEP) measured at baseline and over 60 min after iTBS. Results: Both monophasic and biphasic M1 iTBS led to significant increases in MEP amplitude. As predicted, linear mixed effects (LME) models showed that the iTBS condition had a significant effect on the MEP amplitude (χ2 (1) = 27.615, p
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- 2023
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10. From dawn till dusk: Time-adaptive bayesian optimization for neurostimulation
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John E. Fleming, Ines Pont Sanchis, Oscar Lemmens, Angus Denison-Smith, Timothy O. West, Timothy Denison, and Hayriye Cagnan
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Biology (General) ,QH301-705.5 - Published
- 2023
11. Corrigendum to 'Pulse width modulation-based TMS: Primary motor cortex responses compared to conventional monophasic stimuli' [Brain Stimulat 15 (2022) 980–983]
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Majid Memarian Sorkhabi, Karen Wendt, Jacinta O'Shea, and Timothy Denison
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Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Published
- 2023
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12. Pulse width modulation-based TMS: Primary motor cortex responses compared to conventional monophasic stimuli
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Majid Memarian Sorkhabi, Karen Wendt, Jacinta O'Shea, and Timothy Denison
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Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Published
- 2022
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13. Diurnal modulation of subthalamic beta oscillatory power in Parkinson’s disease patients during deep brain stimulation
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Joram J. van Rheede, Lucia K. Feldmann, Johannes L. Busch, John E. Fleming, Varvara Mathiopoulou, Timothy Denison, Andrew Sharott, and Andrea A. Kühn
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Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Abstract Beta-band activity in the subthalamic local field potential (LFP) is correlated with Parkinson’s disease (PD) symptom severity and is the therapeutic target of deep brain stimulation (DBS). While beta fluctuations in PD patients are well characterized on shorter timescales, it is not known how beta activity evolves around the diurnal cycle, outside a clinical setting. Here, we obtained chronic recordings (34 ± 13 days) of subthalamic beta power in PD patients implanted with the Percept DBS device during high-frequency DBS and analysed their diurnal properties as well as sensitivity to artifacts. Time of day explained 41 ± 9% of the variance in beta power (p
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- 2022
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14. Toward therapeutic electrophysiology: beta-band suppression as a biomarker in chronic local field potential recordings
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Lucia K. Feldmann, Roxanne Lofredi, Wolf-Julian Neumann, Bassam Al-Fatly, Jan Roediger, Bahne H. Bahners, Petyo Nikolov, Timothy Denison, Assel Saryyeva, Joachim K. Krauss, Katharina Faust, Esther Florin, Alfons Schnitzler, Gerd-Helge Schneider, and Andrea A. Kühn
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Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Abstract Adaptive deep brain stimulation (aDBS) is a promising concept for feedback-based neurostimulation, with the potential of clinical implementation with the sensing-enabled Percept neurostimulator. We aim to characterize chronic electrophysiological activity during stimulation and to validate beta-band activity as a biomarker for bradykinesia. Subthalamic activity was recorded during stepwise stimulation amplitude increase OFF medication in 10 Parkinson’s patients during rest and finger tapping. Offline analysis of wavelet-transformed beta-band activity and assessment of inter-variable relationships in linear mixed effects models were implemented. There was a stepwise suppression of low-beta activity with increasing stimulation intensity (p = 0.002). Low-beta power was negatively correlated with movement speed and predictive for velocity improvements (p
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- 2022
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15. Development and validation of a diagnostic aid for convulsive epilepsy in sub-Saharan Africa: a retrospective case-control study
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Gabriel Davis Jones, MD, Symon M Kariuki, PhD, Anthony K Ngugi, PhD, Angelina Kakooza Mwesige, PhD, Honorati Masanja, PhD, Seth Owusu-Agyei, ProfPhD, Ryan Wagner, PhD, J Helen Cross, ProfMD, Josemir W Sander, ProfPhD, Charles R Newton, ProfMD, Arjune Sen, ProfPhD, Hanna Abban, Patrick Adjei, Ken Ae-Ngibise, Francis Agbokey, Lisa Aissaoui, Albert Akpalu, Bright Akpalu, Sabina Asiamah, Gershim Asiki, Mercy Atieno, Evasius Bauni, Dan Bhwana, Mary Bitta, Christian Bottomley, Martin Chabi, Eddie Chengo, Neerja Chowdhary, Myles Connor, Helen Cross, Mark Collinson, Emmanuel Darkwa, Timothy Denison, Victor Doku, Tarun Dua, Isaac Egesa, Tony Godi, F. Xavier Gómez-Olivé, Simone Grassi, Samuel Iddi, Daniel Nana Yaw Abankwah Junior, Kathleen Kahn, Angelina Kakooza, Symon Kariuki, Gathoni Kamuyu, Clarah Khalayi, Henrika Kimambo, Immo Kleinschmidt, Thomas Kwasa, Sloan Mahone, Gergana Manolova, Honorati Masanja, Alexander Mathew, William Matuja, David McDaid, Bruno Mmbando, Daniel Mtai Mwanga, Dorcas Muli, Victor Mung'ala Odera, Frederick Murunga Wekesah, Vivian Mushi, Anthony Ngugi, Peter Odermatt, Rachael Odhiambo, James O Mageto, Peter Otieno, Seth Owusu-Agyei, George Pariyo, Stefan Peterson, Josemir Sander, Arjune Sen, Cynthia Sottie, Isolide Sylvester, Stephen Tollman, Yvonne Thoya, Rhian Twine, Sonia Vallentin, Ryan Wagner, Richard Walker, and Stella Waruingi
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Computer applications to medicine. Medical informatics ,R858-859.7 - Abstract
Summary: Background: Identification of convulsive epilepsy in sub-Saharan Africa relies on access to resources that are often unavailable. Infrastructure and resource requirements can further complicate case verification. Using machine-learning techniques, we have developed and tested a region-specific questionnaire panel and predictive model to identify people who have had a convulsive seizure. These findings have been implemented into a free app for health-care workers in Kenya, Uganda, Ghana, Tanzania, and South Africa. Methods: In this retrospective case-control study, we used data from the Studies of the Epidemiology of Epilepsy in Demographic Sites in Kenya, Uganda, Ghana, Tanzania, and South Africa. We randomly split these individuals using a 7:3 ratio into a training dataset and a validation dataset. We used information gain and correlation-based feature selection to identify eight binary features to predict convulsive seizures. We then assessed several machine-learning algorithms to create a multivariate prediction model. We validated the best-performing model with the internal dataset and a prospectively collected external-validation dataset. We additionally evaluated a leave-one-site-out model (LOSO), in which the model was trained on data from all sites except one that, in turn, formed the validation dataset. We used these features to develop a questionnaire-based predictive panel that we implemented into a multilingual app (the Epilepsy Diagnostic Companion) for health-care workers in each geographical region. Findings: We analysed epilepsy-specific data from 4097 people, of whom 1985 (48·5%) had convulsive epilepsy, and 2112 were controls. From 170 clinical variables, we initially identified 20 candidate predictor features. Eight features were removed, six because of negligible information gain and two following review by a panel of qualified neurologists. Correlation-based feature selection identified eight variables that demonstrated predictive value; all were associated with an increased risk of an epileptic convulsion except one. The logistic regression, support vector, and naive Bayes models performed similarly, outperforming the decision-tree model. We chose the logistic regression model for its interpretability and implementability. The area under the receiver operator curve (AUC) was 0·92 (95% CI 0·91–0·94, sensitivity 85·0%, specificity 93·7%) in the internal-validation dataset and 0·95 (0·92–0·98, sensitivity 97·5%, specificity 82·4%) in the external-validation dataset. Similar results were observed for the LOSO model (AUC 0·94, 0·93–0·96, sensitivity 88·2%, specificity 95·3%). Interpretation: On the basis of these findings, we developed the Epilepsy Diagnostic Companion as a predictive model and app offering a validated culture-specific and region-specific solution to confirm the diagnosis of a convulsive epileptic seizure in people with suspected epilepsy. The questionnaire panel is simple and accessible for health-care workers without specialist knowledge to administer. This tool can be iteratively updated and could lead to earlier, more accurate diagnosis of seizures and improve care for people with epilepsy. Funding: The Wellcome Trust, the UK National Institute of Health Research, and the Oxford NIHR Biomedical Research Centre.
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- 2023
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16. Evoked resonant neural activity in subthalamic local field potentials reflects basal ganglia network dynamics
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Christoph Wiest, Shenghong He, Benoit Duchet, Alek Pogosyan, Moaad Benjaber, Timothy Denison, Harutomo Hasegawa, Keyoumars Ashkan, Fahd Baig, Ilaria Bertaina, Francesca Morgante, Erlick A. Pereira, Flavie Torrecillos, and Huiling Tan
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Parkinson's disease ,Deep brain stimulation ,Evoked resonant neural activity ,Adaptive DBS ,Local field potentials ,Subthalamic nucleus ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Evoked resonant neural activity (ERNA) is induced by subthalamic deep brain stimulation (DBS) and was recently suggested as a marker of lead placement and contact selection in Parkinson's disease. Yet, its underlying mechanisms and how it is modulated by stimulation parameters are unclear. Here, we recorded local field potentials from 27 Parkinson's disease patients, while leads were externalised to scrutinise the ERNA. First, we show that ERNA in the time series waveform and spectrogram likely represent the same activity, which was contested before. Second, our results show that the ERNA has fast and slow dynamics during stimulation, consistent with the synaptic failure hypothesis. Third, we show that ERNA parameters are modulated by different DBS frequencies, intensities, medication states and stimulation modes (continuous DBS vs. adaptive DBS). These results suggest the ERNA might prove useful as a predictor of the best DBS frequency and lowest effective intensity in addition to contact selection. Changes with levodopa and DBS mode suggest that the ERNA may indicate the state of the cortico-basal ganglia circuit making it a putative biomarker to track clinical state in adaptive DBS.
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- 2023
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17. Emerging non-invasive technologies to stimulate the brain more effectively
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Karen Wendt, Majid Memarian Sorkhabi, Jacinta O’Shea, and Timothy Denison
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Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Published
- 2023
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18. Modulation-based TMS: Plasticity effects of theta-burst stimulation
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Karen Wendt, Majid Memarian Sorkhabi, Jacinta O’Shea, and Timothy Denison
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Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Published
- 2023
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19. The sensitivity of ECG contamination to surgical implantation site in brain computer interfaces
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Wolf-Julian Neumann, Majid Memarian Sorkhabi, Moaad Benjaber, Lucia K. Feldmann, Assel Saryyeva, Joachim K. Krauss, Maria Fiorella Contarino, Tomas Sieger, Robert Jech, Gerd Tinkhauser, Claudio Pollo, Chiara Palmisano, Ioannis U. Isaias, Daniel D. Cummins, Simon J. Little, Philip A. Starr, Vasileios Kokkinos, Schneider Gerd-Helge, Todd Herrington, Peter Brown, R. Mark Richardson, Andrea A. Kühn, and Timothy Denison
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Deep brain stimulation ,Brain computer interface ,Oscillations ,Artifacts ,Neuromodulation ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Background: Brain sensing devices are approved today for Parkinson's, essential tremor, and epilepsy therapies. Clinical decisions for implants are often influenced by the premise that patients will benefit from using sensing technology. However, artifacts, such as ECG contamination, can render such treatments unreliable. Therefore, clinicians need to understand how surgical decisions may affect artifact probability. Objectives: Investigate neural signal contamination with ECG activity in sensing enabled neurostimulation systems, and in particular clinical choices such as implant location that impact signal fidelity. Methods: Electric field modeling and empirical signals from 85 patients were used to investigate the relationship between implant location and ECG contamination. Results: The impact on neural recordings depends on the difference between ECG signal and noise floor of the electrophysiological recording. Empirically, we demonstrate that severe ECG contamination was more than 3.2x higher in left-sided subclavicular implants (48.3%), when compared to right-sided implants (15.3%). Cranial implants did not show ECG contamination. Conclusions: Given the relative frequency of corrupted neural signals, we conclude that implant location will impact the ability of brain sensing devices to be used for “closed-loop” algorithms. Clinical adjustments such as implant location can significantly affect signal integrity and need consideration.
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- 2021
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20. A Pilot Study Leveraging Large Scale Datasets from Internet-Connected Transcranial Magnetic Stimulators: Circadian Modulation of Cortical Excitability
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Majid Memarian Sorkhabi, Karen Wendt, Eric Granstrom, Daniel Gregory, Scott Rees, and Timothy Denison
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Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Published
- 2023
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21. Neurostimulation as a Method of Treatment and a Preventive Measure in Canine Drug-Resistant Epilepsy: Current State and Future Prospects
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Marta Nowakowska, Muammer Üçal, Marios Charalambous, Sofie F. M. Bhatti, Timothy Denison, Sebastian Meller, Gregory A. Worrell, Heidrun Potschka, and Holger A. Volk
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drug-resistant epilepsy ,dogs ,vagus nerve stimulation ,deep brain stimulation ,transcranial magnetic stimulation ,seizure ,Veterinary medicine ,SF600-1100 - Abstract
Modulation of neuronal activity for seizure control using various methods of neurostimulation is a rapidly developing field in epileptology, especially in treatment of refractory epilepsy. Promising results in human clinical practice, such as diminished seizure burden, reduced incidence of sudden unexplained death in epilepsy, and improved quality of life has brought neurostimulation into the focus of veterinary medicine as a therapeutic option. This article provides a comprehensive review of available neurostimulation methods for seizure management in drug-resistant epilepsy in canine patients. Recent progress in non-invasive modalities, such as repetitive transcranial magnetic stimulation and transcutaneous vagus nerve stimulation is highlighted. We further discuss potential future advances and their plausible application as means for preventing epileptogenesis in dogs.
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- 2022
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22. Numerical Modeling of Plasticity Induced by Quadri-Pulse Stimulation
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Majid Memarian Sorkhabi, Karen Wendt, Marcus T. Wilson, and Timothy Denison
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Transcranial magnetic stimulation ,TMS-induced plasticity ,QPS ,near-rectangular magnetic stimuli ,cTMS device ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
Quadri-pulse stimulation (QPS), a type of repetitive transcranial magnetic stimulation (rTMS), can induce a considerable aftereffect on cortical synapses. Human experiments have shown that the type of effect on synaptic efficiency (in terms of potentiation or depression) depends on the time interval between pulses. The maturation of biophysically-based models, which describe the physiological properties of plasticity mathematically, offers a beneficial framework to explore induced plasticity for new stimulation protocols. To model the QPS paradigm, a phenomenological model based on the knowledge of spike timing-dependent plasticity (STDP) mechanisms of synaptic plasticity was utilized where the cortex builds upon the platform of neuronal population modeling. Induced cortical plasticity was modeled for both conventional monophasic pulses and unidirectional pulses generated by the cTMS device, in a total of 117 different scenarios. For the conventional monophasic stimuli, the results of the predictive model broadly follow what is typically seen in human experiments. Unidirectional pulses can produce a similar range of plasticity. Additionally, changing the pulse width had a considerable effect on the plasticity (approximately 20% increase). As the width of the positive phase increases, the size of the potentiation will also increase. The proposed model can generate predictions to guide future plasticity experiments. Estimating the plasticity and optimizing the rTMS protocols might effectively improve the safety implications of TMS experiments by reducing the number of delivered pulses to participants. Finding the optimal stimulation protocol with the maximum potentiation/depression can lead to the design of a new TMS pulse generator device with targeted hardware and control algorithms.
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- 2021
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23. Case Report: Embedding 'Digital Chronotherapy' Into Medical Devices—A Canine Validation for Controlling Status Epilepticus Through Multi-Scale Rhythmic Brain Stimulation
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Mayela Zamora, Sebastian Meller, Filip Kajin, James J. Sermon, Robert Toth, Moaad Benjaber, Derk-Jan Dijk, Rafal Bogacz, Gregory A. Worrell, Antonio Valentin, Benoit Duchet, Holger A. Volk, and Timothy Denison
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deep brain stimulation ,centromedian thalamus ,circadian ,entrainment ,epilepsy ,chronotherapy ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Circadian and other physiological rhythms play a key role in both normal homeostasis and disease processes. Such is the case of circadian and infradian seizure patterns observed in epilepsy. However, these rhythms are not fully exploited in the design of active implantable medical devices. In this paper we explore a new implantable stimulator that implements chronotherapy as a feedforward input to supplement both open-loop and closed-loop methods. This integrated algorithm allows for stimulation to be adjusted to the ultradian, circadian and infradian patterns observed in patients through slowly-varying temporal adjustments of stimulation and algorithm sub-components, while also enabling adaption of stimulation based on immediate physiological needs such as a breakthrough seizure or change of posture. Embedded physiological sensors in the stimulator can be used to refine the baseline stimulation circadian pattern as a “digital zeitgeber,” i.e., a source of stimulus that entrains or synchronizes the subject's natural rhythms. This algorithmic approach is tested on a canine with severe drug-resistant idiopathic generalized epilepsy exhibiting a characteristic diurnal pattern correlated with sleep-wake cycles. Prior to implantation, the canine's cluster seizures evolved to status epilepticus (SE) and required emergency pharmacological intervention. The cranially-mounted system was fully-implanted bilaterally into the centromedian nucleus of the thalamus. Using combinations of time-based modulation, thalamocortical rhythm-specific tuning of frequency parameters as well as fast-adaptive modes based on activity, the canine experienced no further SE events post-implant as of the time of writing (7 months). Importantly, no significant cluster seizures have been observed either, allowing the reduction of rescue medication. The use of digitally-enabled chronotherapy as a feedforward signal to augment adaptive neurostimulators could prove a useful algorithmic method in conditions where sensitivity to temporal patterns are characteristics of the disease state, providing a novel mechanism for tailoring a more patient-specific therapy approach.
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- 2021
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24. A high-performance 8 nV/√Hz 8-channel wearable and wireless system for real-time monitoring of bioelectrical signals
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Konstantinos Petkos, Simos Koutsoftidis, Thomas Guiho, Patrick Degenaar, Andrew Jackson, Stephen E. Greenwald, Peter Brown, Timothy Denison, and Emmanuel M. Drakakis
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Neurological disorders ,Bioelectrical signals ,Analog front-end ,High-performance ,Wearable ,Wireless ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Abstract Background It is widely accepted by the scientific community that bioelectrical signals, which can be used for the identification of neurophysiological biomarkers indicative of a diseased or pathological state, could direct patient treatment towards more effective therapeutic strategies. However, the design and realisation of an instrument that can precisely record weak bioelectrical signals in the presence of strong interference stemming from a noisy clinical environment is one of the most difficult challenges associated with the strategy of monitoring bioelectrical signals for diagnostic purposes. Moreover, since patients often have to cope with the problem of limited mobility being connected to bulky and mains-powered instruments, there is a growing demand for small-sized, high-performance and ambulatory biopotential acquisition systems in the Intensive Care Unit (ICU) and in High-dependency wards. Finally, to the best of our knowledge, there are no commercial, small, battery-powered, wearable and wireless recording-only instruments that claim the capability of recording electrocorticographic (ECoG) signals. Methods To address this problem, we designed and developed a low-noise (8 nV/√Hz), eight-channel, battery-powered, wearable and wireless instrument (55 × 80 mm2). The performance of the realised instrument was assessed by conducting both ex vivo and in vivo experiments. Results To provide ex vivo proof-of-function, a wide variety of high-quality bioelectrical signal recordings are reported, including electroencephalographic (EEG), electromyographic (EMG), electrocardiographic (ECG), acceleration signals, and muscle fasciculations. Low-noise in vivo recordings of weak local field potentials (LFPs), which were wirelessly acquired in real time using segmented deep brain stimulation (DBS) electrodes implanted in the thalamus of a non-human primate, are also presented. Conclusions The combination of desirable features and capabilities of this instrument, namely its small size (~one business card), its enhanced recording capabilities, its increased processing capabilities, its manufacturability (since it was designed using discrete off-the-shelf components), the wide bandwidth it offers (0.5–500 Hz) and the plurality of bioelectrical signals it can precisely record, render it a versatile and reliable tool to be utilized in a wide range of applications and environments.
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- 2019
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25. Epilepsy Personal Assistant Device—A Mobile Platform for Brain State, Dense Behavioral and Physiology Tracking and Controlling Adaptive Stimulation
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Tal Pal Attia, Daniel Crepeau, Vaclav Kremen, Mona Nasseri, Hari Guragain, Steven W. Steele, Vladimir Sladky, Petr Nejedly, Filip Mivalt, Jeffrey A. Herron, Matt Stead, Timothy Denison, Gregory A. Worrell, and Benjamin H. Brinkmann
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epilepsy ,deep brain stimulation ,implantable devices ,neuromodulation ,seizure detection ,seizure prediction ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Epilepsy is one of the most common neurological disorders, and it affects almost 1% of the population worldwide. Many people living with epilepsy continue to have seizures despite anti-epileptic medication therapy, surgical treatments, and neuromodulation therapy. The unpredictability of seizures is one of the most disabling aspects of epilepsy. Furthermore, epilepsy is associated with sleep, cognitive, and psychiatric comorbidities, which significantly impact the quality of life. Seizure predictions could potentially be used to adjust neuromodulation therapy to prevent the onset of a seizure and empower patients to avoid sensitive activities during high-risk periods. Long-term objective data is needed to provide a clearer view of brain electrical activity and an objective measure of the efficacy of therapeutic measures for optimal epilepsy care. While neuromodulation devices offer the potential for acquiring long-term data, available devices provide very little information regarding brain activity and therapy effectiveness. Also, seizure diaries kept by patients or caregivers are subjective and have been shown to be unreliable, in particular for patients with memory-impairing seizures. This paper describes the design, architecture, and development of the Mayo Epilepsy Personal Assistant Device (EPAD). The EPAD has bi-directional connectivity to the implanted investigational Medtronic Summit RC+STM device to implement intracranial EEG and physiological monitoring, processing, and control of the overall system and wearable devices streaming physiological time-series signals. In order to mitigate risk and comply with regulatory requirements, we developed a Quality Management System (QMS) to define the development process of the EPAD system, including Risk Analysis, Verification, Validation, and protocol mitigations. Extensive verification and validation testing were performed on thirteen canines and benchtop systems. The system is now under a first-in-human trial as part of the US FDA Investigational Device Exemption given in 2018 to study modulated responsive and predictive stimulation using the Mayo EPAD system and investigational Medtronic Summit RC+STM in ten patients with non-resectable dominant or bilateral mesial temporal lobe epilepsy. The EPAD system coupled with an implanted device capable of EEG telemetry represents a next-generation solution to optimizing neuromodulation therapy.
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- 2021
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26. A digital transcranial magnetic stimulator for generating arbitrary pulse-shapes and patterns
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Majid Memarian Sorkhabi, Karen Wendt, Jacinta O'Shea, and Timothy Denison
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Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Published
- 2021
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27. Proceedings of the second biennial Cleveland Neural Engineering Workshop 2013
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Kim Anderson, Abidemi Ajiboye, Timothy Denison, Jennifer French, Kenneth Gustafson, Kevin Kilgore, Naomi Kleitman, Audrey Kusiak, Brian Litt, Megan Moynahan, Eric Perreault, Douglas Weber, Justin Williams, and Dustin Tyler
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Neural ,Engineering ,Strategy ,Infrastructure ,Advocacy ,Rehabilitation ,Medical technology ,R855-855.5 - Abstract
Abstract The Cleveland Neural Engineering Workshop (NEW) is a biennial meeting started in 2011 as an “unconference” to bring together leaders in the neural engineering and related fields. Since the first iteration of the meeting, NEW has evolved from “just getting together” to a more important purpose of creating, reviewing, and promoting a uniform strategic roadmap for the field. The purpose of this short report, as well as the companion 2015 and 2017 reports, is to provide a historical record of this meeting and the evolution of the roadmap. These reports more importantly establish a baseline for the next meeting to be held in June, 2019. The second Neural Engineering Workshop (NEW) was held in June 2013. The two-day workshop was hosted by the Cleveland Advanced Platform for Technology National Veterans Affairs Center, the Functional Electrical Stimulation National Veterans Affairs Center, and the Case Western Reserve University in Cleveland, Ohio. Participants identified seven areas of future focus in the field of neural engineering: active communications with users, advocacy (regulatory), network building (clinical practice), case studies (clinical and technical), early industrial feedback, value chain resources, engagement, and advocacy (funding). This proceedings document summarizes the meeting outcome.
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- 2018
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28. Integrating Brain Implants With Local and Distributed Computing Devices: A Next Generation Epilepsy Management System
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Vaclav Kremen, Benjamin H. Brinkmann, Inyong Kim, Hari Guragain, Mona Nasseri, Abigail L. Magee, Tal Pal Attia, Petr Nejedly, Vladimir Sladky, Nathanial Nelson, Su-Youne Chang, Jeffrey A. Herron, Tom Adamski, Steven Baldassano, Jan Cimbalnik, Vince Vasoli, Elizabeth Fehrmann, Tom Chouinard, Edward E. Patterson, Brian Litt, Matt Stead, Jamie Van Gompel, Beverly K. Sturges, Hang Joon Jo, Chelsea M. Crowe, Timothy Denison, and Gregory A. Worrell
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Epilepsy ,deep brain stimulation ,implantable devices ,seizure detection ,seizure prediction ,distributed computing ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Medical technology ,R855-855.5 - Abstract
Brain stimulation has emerged as an effective treatment for a wide range of neurological and psychiatric diseases. Parkinson's disease, epilepsy, and essential tremor have FDA indications for electrical brain stimulation using intracranially implanted electrodes. Interfacing implantable brain devices with local and cloud computing resources have the potential to improve electrical stimulation efficacy, disease tracking, and management. Epilepsy, in particular, is a neurological disease that might benefit from the integration of brain implants with off-the-body computing for tracking disease and therapy. Recent clinical trials have demonstrated seizure forecasting, seizure detection, and therapeutic electrical stimulation in patients with drug-resistant focal epilepsy. In this paper, we describe a next-generation epilepsy management system that integrates local handheld and cloud-computing resources wirelessly coupled to an implanted device with embedded payloads (sensors, intracranial EEG telemetry, electrical stimulation, classifiers, and control policy implementation). The handheld device and cloud computing resources can provide a seamless interface between patients and physicians, and realtime intracranial EEG can be used to classify brain state (wake/sleep, preseizure, and seizure), implement control policies for electrical stimulation, and track patient health. This system creates a flexible platform in which low demand analytics requiring fast response times are embedded in the implanted device and more complex algorithms are implemented in offthebody local and distributed cloud computing environments. The system enables tracking and management of epileptic neural networks operating over time scales ranging from milliseconds to months.
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- 2018
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29. Sensorimotor ECoG Signal Features for BCI Control: A Comparison Between People With Locked-In Syndrome and Able-Bodied Controls
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Zachary V. Freudenburg, Mariana P. Branco, Sacha Leinders, Benny H. van der Vijgh, Elmar G. M. Pels, Timothy Denison, Leonard H. van den Berg, Kai J. Miller, Erik J. Aarnoutse, Nick F. Ramsey, and Mariska J. Vansteensel
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brain-computer interface ,implant ,sensorimotor cortex ,amyotrophic lateral sclerosis ,brain stem stroke ,electrocorticography ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
The sensorimotor cortex is a frequently targeted brain area for the development of Brain-Computer Interfaces (BCIs) for communication in people with severe paralysis and communication problems (locked-in syndrome; LIS). It is widely acknowledged that this area displays an increase in high-frequency band (HFB) power and a decrease in the power of the low frequency band (LFB) during movement of, for example, the hand. Upon termination of hand movement, activity in the LFB band typically shows a short increase (rebound). The ability to modulate the neural signal in the sensorimotor cortex by imagining or attempting to move is crucial for the implementation of sensorimotor BCI in people who are unable to execute movements. This may not always be self-evident, since the most common causes of LIS, amyotrophic lateral sclerosis (ALS) and brain stem stroke, are associated with significant damage to the brain, potentially affecting the generation of baseline neural activity in the sensorimotor cortex and the modulation thereof by imagined or attempted hand movement. In the Utrecht NeuroProsthesis (UNP) study, a participant with LIS caused by ALS and a participant with LIS due to brain stem stroke were implanted with a fully implantable BCI, including subdural electrocorticography (ECoG) electrodes over the sensorimotor area, with the purpose of achieving ECoG-BCI-based communication. We noted differences between these participants in the spectral power changes generated by attempted movement of the hand. To better understand the nature and origin of these differences, we compared the baseline spectral features and task-induced modulation of the neural signal of the LIS participants, with those of a group of able-bodied people with epilepsy who received a subchronic implant with ECoG electrodes for diagnostic purposes. Our data show that baseline LFB oscillatory components and changes generated in the LFB power of the sensorimotor cortex by (attempted) hand movement differ between participants, despite consistent HFB responses in this area. We conclude that the etiology of LIS may have significant effects on the LFB spectral components in the sensorimotor cortex, which is relevant for the development of communication-BCIs for this population.
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- 2019
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30. Proceedings of the Fourth Annual Deep Brain Stimulation Think Tank - A Review of Emerging Issues and Technologies
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Wissam Deeb, James J Giordano, Peter Justin Rossi, Alon Mogilner, Aysegul Gunduz, Jack William Judy, Bryan T. Klassen, Christopher R. Butson, Craig van Horne, Damiaan Denys, Darin D Dougherty, David Rowell, Greg A Gerhardt, Gwenn S. Smith, Harrison C. Walker, Helen M Bronte-Stewart, Helen S. Mayberg, Howard J. Chizeck, Jean-Philippe Langevin, Jens Volkmann, Jill Ostrem, Jonathan B Shute, Joohi Jimenez-Shahed, Kelly Douglas Foote, Marvin A Rossi, Michael Oh, Michael Pourfar, Paul B. Rosenburg, Peter Allen Silburn, Coralie De Hemptinne, Philip A. Starr, Timothy Denison, Umer Akbar, Warren M Grill, and Michael S. Okun
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Alzheimer Disease ,Depression ,Parkinson Disease ,Tourette Syndrome ,Neuromodulation ,deep brain stimulation (DBS) ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
This paper provides an overview of current progress in the technological advances and the use of deep brain stimulation (DBS) to treat neurological and neuropsychiatric disorders, as presented by participants of the Fourth Annual Deep Brain Stimulation Think Tank, which was convened in March 2016 in conjunction with the Center for Movement Disorders and Neurorestoration at the University of Florida, Gainesveille FL, USA. The Think Tank discussions first focused on policy and advocacy in DBS research and clinical practice, formation of registries, and issues involving the use of DBS in the treatment of Tourette Syndrome. Next, advances in the use of neuroimaging and electrochemical markers to enhance DBS specificity were addressed. Updates on ongoing use and developments of DBS for the treatment of Parkinson’s disease, essential tremor, Alzheimer’s disease, depression, post-traumatic stress disorder, obesity, addiction were presented, and progress toward innovation(s) in closed-loop applications were discussed. Each section of these proceedings provides updates and highlights of new information as presented at this year’s international Think Tank, with a view toward current and near future advancement of the field.
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- 2016
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31. MorpheusNet: Resource efficient sleep stage classifier for embedded on-line systems.
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Ali Kavoosi, Morgan P. Mitchell, Raveen Kariyawasam, John E. Fleming, Penny Lewis, Heidi Johansen-Berg, Hayriye Cagnan, and Timothy Denison
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- 2024
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32. A Survey of Few-Shot Learning for Biomedical Time Series.
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Chenqi Li, Timothy Denison, and Tingting Zhu
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- 2024
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33. Estimation of the Motor Threshold for Near-Rectangular Stimuli Using the Hodgkin-Huxley Model.
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Majid Memarian Sorkhabi, Karen Wendt, Marcus T. Wilson, and Timothy Denison
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- 2021
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34. Programmable Transcranial Magnetic Stimulation: A Modulation Approach for the Generation of Controllable Magnetic Stimuli.
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Majid Memarian Sorkhabi, Moaad Benjaber, Karen Wendt, Timothy O. West, Daniel J. Rogers, and Timothy Denison
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- 2021
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35. Embedding digital chronotherapy into medical devices - A canine case study in controlling status epilepticus through multi-scale rhythmic brain stimulation.
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Mayela Zamora, Sebastian Meller, Filip Kajin, James J. Sermon, Robert Toth, Moaad Benjaber, Derk-Jan Dijk, Rafal Bogacz, Gregory A. Worrell, Antonio Valentín, Benoit Duchet, Holger A. Volk, and Timothy Denison
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- 2021
36. A Chronically Implantable Neural Coprocessor for Investigating the Treatment of Neurological Disorders.
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Scott Stanslaski, Jeffrey Herron, Tom Chouinard, Duane Bourget, Ben Isaacson, Václav Kremen, Enrico Opri, William Drew, Benjamin H. Brinkmann, Aysegul Gunduz, Tom Adamski, Gregory A. Worrell, and Timothy Denison
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- 2018
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37. An Implantable Optical Stimulation Delivery System for Actuating an Excitable Biosubstrate.
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Kunal Paralikar, Peng Cong, Ofer Yizhar, Lief Ericsson Fenno, Wesley Santa, Chris Nielsen, David Dinsmoor, Bob Hocken, Gordon Munns, Jon Giftakis, Karl Deisseroth, and Timothy Denison
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- 2011
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38. Cloud computing for seizure detection in implanted neural devices.
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Steven Baldassano, Xuelong Zhao, Benjamin Brinkmann, Vaclav Kremen, John Bernabei, Mark Cook, Timothy Denison, Gregory Worrell, and Brian Litt
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- 2019
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