Search

In recent years, convolutional neural networks (CNNs) have emerged as highly efficient architectures for image and audio classification tasks, gaining widespread adoption in state-of-the-art methodologies. While CNNs excel in machine learning scenarios where the data representation exhibits a grid structure, they face challenges in generalizing to other data types. For instance, they struggle with data structured on 3D meshes (e.g., measurements from a network of meteorological stations) or data represented by graph structures (e.g., molecular graphs). To address such challenges, the scientific literature proposes novel graph-based convolutional network architectures, extending the classical convolution concept to data structures defined by graphs. In this paper, we use such a deep learning architecture to examine graphs defined using the ICD-10 codes appearing in the medical data of patients who suffered hemorrhagic stroke in Hungary in the period 2006–2012. The purpose of the analysis is to predict the risk of stroke by examining a patient's ICD graph. Finally, we also compare the effectiveness of this method with classical machine learning classification methods. The results demonstrate that the graph-based method can predict the risk of stroke with an accuracy of over 73%, which is more than 10% higher than the classical methods. [ABSTRACT FROM AUTHOR]

The efficiency of natural language processing has improved dramatically with the advent of machine learning models, particularly neural network-based solutions. However, some tasks are still challenging, especially when considering specific domains. This paper presents a model that can extract insights from customer reviews using machine learning methods integrated into a pipeline. For topic modeling, our composite model uses transformer-based neural networks designed for natural language processing, vector-embedding-based keyword extraction, and clustering. The elements of our model have been integrated and tailored to better meet the requirements of efficient information extraction and topic modeling of the extracted information for opinion mining. Our approach was validated and compared with other state-of-the-art methods using publicly available benchmark datasets. The results show that our system performs better than existing topic modeling and keyword extraction methods in this task. [ABSTRACT FROM AUTHOR]

In this work, we investigated the ability of several Convolutional Neural Network (CNN) models for predicting the spread of cancer using medical images. We used a dataset released by the Kaggle, namely PatchCamelyon. The dataset consists of 220,025 pathology images digitized by a tissue scanner. A clinical expert labeled each image as cancerous or non-cancerous. We used 70% of the images as a training set and 30% of them as a validation set. We design three models based on three commonly used modules: VGG, Inception, and Residual Network (ResNet), to develop an ensemble model and implement a voting system to determine the final decision. Then, we compared the performance of this ensemble model to the performance of each single model. Additionally, we used a weighted majority voting system, where the final prediction is equal to the weighted average of the prediction produced by each network. Our results show that the classification of the two ensemble models reaches 96%. Thus these results prove that the ensemble model outperforms single network architectures. [ABSTRACT FROM AUTHOR]

Convolutional Neural Network (CNN) for medical image classification has produced satisfying work [11, 12, 15]. Several pretrained models such as VGG19 [17], InceptionV3 [18], and MobileNet [8] are architectures that can be relied on to design high accuracy classification models. This work investigates the performance of three pretrained models with two methods of training. The first method trains the model independently, meaning that each model is given an input and trained separately, then the best results are determined by majority voting. In the second method the three pretrained models are trained simultaneously as interconnected models. The interconnected model adopts an ensemble architecture as is shown in [7]. By training multiple CNNs, this work gives optimum results compared to a single CNN. The difference is that the three subnetworks are trained simultaneously in an interconnected network and showing one expected result. In the training process the interconnected model determines each subnetwork’s weight by itself. Furthermore, this model will apply the most suitable weight to the final decision. The interconnected model showed comparable performance after training on several datasets. The measurement includes comparing the Accuracy, Precision and Recall scores as is shown in confusion matrix [3, 14]. [ABSTRACT FROM AUTHOR]

Researchers often use theoretical models which provide a relatively simple, yet concise and effective way of modelling various phenomena. However, it is a well-known fact that the more complex the model, the more complex the mathematical description is. For this reason, theoretical models generally avoid large complexity and aim for the simplest possible definition, which although makes models mathematically more manageable, in practice it also often leads to sub-optimal performance. Furthermore, the data collected during the observations usually contain confounding factors, for which a simple theoretical model can not be prepared. Overall, mathematical models are usually too rigid and sophisticated, and therefore cannot really deal with sudden changes in the environment. The application of artificial intelligence, however, provides a good opportunity to develop complex models that can combine the basic capabilities of the theoretical models with the ability to learn more complex relationships. It has been shown [16] that with neural networks, we can build such models that can approximate mathematical functions. Trained artificial neural networks are thus able to behave like theoretical models developed for different fields, while still retaining their overall flexibility, which guarantees an overall better performance in a complex real-world environment. The aim of our study is to show our notion that we can create an architecture using neural networks, which is able to approximate a given theoretical model, and then further improve it with the help of real data to suit the real world and its various aspects better. In order to validate the functionality of the architecture developed by us, we have selected a simple theoretical model, namely the Kermack-McKendrick one [4] as the base of our research. This is an SIR [2] model, which is a relatively simple compartmental epidemic model, based on differential equations that can be used well for infections that spread very similarly to influenza or COVID. However, on one hand, the SIR model relies too heavily on its parameters, with slight changes in them leading to drastic overall changes of the S, I and R curves, and on the other hand, the simplicity of the SIR model distorts its accuracy in many cases. In our paper, by using the SIR model, we will show that the architecture described above can be a valid approach to modeling the spread of a given disease (such as influenza or COVID-19). To this end, we detail the accuracy of our models with different settings and configurations and show that it performs better than both a simple mathematical model and a plain neural network with randomly initialized weights. [ABSTRACT FROM AUTHOR]

Simple Summary: Aside from tissue cell renewal, tumor cells are also produced every day. In ordinary conditions, immunologically controlled cell death mechanisms limit cancer development. There are several cell death processes used for how normal and tumor cells are eliminated at the end of their lifespan. In cancer therapy, cells dying via immunological death are more efficiently eradicated than cells dying by classical apoptosis. Photodynamic treatments with some photosensitizers target lysosomes. Lysosomal death diverts apoptosis to the immunologically more pertinent necrosis-like death pathways. Acridine orange (AO), a well-known photosensitizer, targets lysosomes as well. We have synthesized a new compound abbreviated as DM, a modified AO, and examined details of intracellular processes leading to photodynamic cell death. We have proven that DM targets lysosomes better than AO. Remarkably, with DM, we could visualize an abrupt nuclear DNA release from cells during the photodynamic process. Our work highlights which cellular events may enhance immunological cell death. In cancer therapy, immunogenic cell death eliminates tumor cells more efficiently than conventional apoptosis. During photodynamic therapy (PDT), some photosensitizer (PS) targeting lysosomes divert apoptosis to the immunologically more relevant necrosis-like cell death. Acridine orange (AO) is a PS targeting lysosome. We synthesized a new compound, 3-N,N-dimethylamino-6-isocyanoacridine (DM), a modified AO, aiming to target lysosomes better. To compare DM and AO, we studied optical properties, toxicity, cell internalization, and phototoxicity. In addition, light-mediated effects were monitored by the recently developed QUINESIn method on nuclei, and membrane stability, morphology, and function of lysosomes utilizing fluorescent probes by imaging cytometry in single cells. DM proved to be a better lysosomal marker at 405 nm excitation and lysed lysosomes more efficiently. AO injured DNA and histones more extensively than DM. Remarkably, DM's optical properties helped visualize shockwaves of nuclear DNA released from cells during the PDT. The asymmetric polar modification of the AO leads to a new compound, DM, which has increased efficacy in targeting and disrupting lysosomes. Suitable AO modification may boost adaptive immune response making PDT more efficient. [ABSTRACT FROM AUTHOR]

Objectives: The COVID-19 pandemic is considered a major threat to global public health. The aim of our study was to use the official epidemiological data to forecast the epidemic curves (daily new cases) of the COVID-19 using Artificial Intelligence (AI)-based Recurrent Neural Networks (RNNs), then to compare and validate the predicted models with the observed data., Methods: We used publicly available datasets from the World Health Organization and Johns Hopkins University to create a training dataset, then we employed RNNs with gated recurring units (Long Short-Term Memory - LSTM units) to create two prediction models. Our proposed approach considers an ensemble-based system, which is realized by interconnecting several neural networks. To achieve the appropriate diversity, we froze some network layers that control the way how the model parameters are updated. In addition, we could provide country-specific predictions by transfer learning, and with extra feature injections from governmental constraints, better predictions in the longer term are achieved. We have calculated the Root Mean Squared Logarithmic Error (RMSLE), Root Mean Square Error (RMSE), and Mean Absolute Percentage Error (MAPE) to thoroughly compare our model predictions with the observed data., Results: We reported the predicted curves for France, Germany, Hungary, Italy, Spain, the United Kingdom, and the United States of America. The result of our study underscores that the COVID-19 pandemic is a propagated source epidemic, therefore repeated peaks on the epidemic curve are to be anticipated. Besides, the errors between the predicted and validated data and trends seem to be low., Conclusion: Our proposed model has shown satisfactory accuracy in predicting the new cases of COVID-19 in certain contexts. The influence of this pandemic is significant worldwide and has already impacted most life domains. Decision-makers must be aware, that even if strict public health measures are executed and sustained, future peaks of infections are possible. The AI-based models are useful tools for forecasting epidemics as these models can be recalculated according to the newly observed data to get a more precise forecasting., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2021 The Authors.)