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The biogeography of terrestrial amniotes is controlled by historical contingency interacting with paleoclimate, morphology and physiological constraints to dispersal. Thermal tolerance is the intersection between organismal requirements and climate conditions which constrains modern organisms to specific locations and was likely a major control on ancient tetrapods. Here, we test the extent of controls exerted by thermal tolerance on the biogeography of 13 Late Triassic tetrapods using a mechanistic modeling program, Niche Mapper. This program accounts for heat and mass transfer into and out of organisms within microclimates. We model our 13 tetrapods in four different climates (cool and warm at low and high latitudes) using environmental conditions that are set using geochemical proxy-based general circulation models. Organismal conditions for the taxa are from proxy-based physiological values and phylogenetic bracketing. We find that thermal tolerances are a sufficient predictor for the latitudinal distribution of our 13 test taxa in the Late Triassic. Our modeled small mammaliamorph can persist at high latitudes with nocturnal activity and daytime burrowing but large pseudosuchians are excluded because they cannot seek nighttime shelter in burrows to retain elevated body temperatures. Our work demonstrates physiological modeling is useful for quantitative testing of the thermal exclusion hypothesis for tetrapods in deep time.

Soft tissues are rarely preserved in the fossil record; therefore, body shape of extinct vertebrates is usually inferred indirectly. Here, the authors use laser-stimulated fluorescence of fossils to detect and reconstruct the body outline of the paravian dinosaurAnchiornisfrom the Late Jurassic.

Synopsis Tyrannosaurid dinosaurs had large preserved leg muscle attachments and low rotational inertia relative to their body mass, indicating that they could turn more quickly than other large theropods. Methods To compare turning capability in theropods, we regressed agility estimates against body mass, incorporating superellipse-based modeled mass, centers of mass, and rotational inertia (mass moment of inertia). Muscle force relative to body mass is a direct correlate of agility in humans, and torque gives potential angular acceleration. Agility scores therefore include rotational inertia values divided by proxies for (1) muscle force (ilium area and estimates of m. caudofemoralis longus cross-section), and (2) musculoskeletal torque. Phylogenetic ANCOVA (phylANCOVA) allow assessment of differences in agility between tyrannosaurids and non-tyrannosaurid theropods (accounting for both ontogeny and phylogeny). We applied conditional error probabilities a(p) to stringently test the null hypothesis of equal agility. Results Tyrannosaurids consistently have agility index magnitudes twice those of allosauroids and some other theropods of equivalent mass, turning the body with both legs planted or pivoting over a stance leg. PhylANCOVA demonstrates definitively greater agilities in tyrannosaurids, and phylogeny explains nearly all covariance. Mass property results are consistent with those of other studies based on skeletal mounts, and between different figure-based methods (our main mathematical slicing procedures, lofted 3D computer models, and simplified graphical double integration). Implications The capacity for relatively rapid turns in tyrannosaurids is ecologically intriguing in light of their monopolization of large (>400 kg), toothed dinosaurian predator niches in their habitats.

We employed the widely-tested biophysiological modeling software, Niche Mapper™ to investigate the metabolic function of the Late Triassic dinosaurs Plateosaurus and Coelophysis during global greenhouse conditions. We tested a variety of assumptions about resting metabolic rate, each evaluated within six microclimate models that bound paleoenvironmental conditions at 12° N paleolatitude, as determined by sedimentological and isotopic proxies for climate within the Chinle Formation of the southwestern United States. Sensitivity testing of metabolic variables and simulated "metabolic chamber" analyses support elevated "ratite-like" metabolic rates and intermediate "monotreme-like" core temperature ranges in these species of early saurischian dinosaur. Our results suggest small theropods may have needed partial to full epidermal insulation in temperate environments, while fully grown prosauropods would have likely been heat stressed in open, hot environments and should have been restricted to cooler microclimates such as dense forests or higher latitudes and elevations. This is in agreement with the Late Triassic fossil record and may have contributed to the latitudinal gap in the Triassic prosauropod record.

When small biological samples are collected by microdissection or other methods, amplification techniques are required to provide sufficient target for hybridization to expression arrays. One such technique is to perform two successive rounds of T7-based in vitro transcription. However, the use of random primers, required to regenerate cDNA from the first round of transcription, results in shortened copies of cDNA from which the 5′ end is missing. In this paper we describe an experiment designed to compare the quality of data obtained from labeling small RNA samples using the Affymetrix Two-Cycle Eukaryotic Target Labeling procedure to that of data obtained using the One-Cycle Eukaryotic Target Labeling protocol. We utilized different preprocessing algorithms to compare the data generated using both labeling methods and present a new algorithm that improves upon existing ones in this setting.