24 results on '"Pickering, Andrew M."'
Search Results
2. Mitochondrial TrxR2 regulates metabolism and protects from metabolic disease through enhanced TCA and ETC function
- Author
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Chocron, E. Sandra, Mdaki, Kennedy, Jiang, Nisi, Cropper, Jodie, and Pickering, Andrew M.
- Published
- 2022
- Full Text
- View/download PDF
3. Gut- and oral-dysbiosis differentially impact spinal- and bulbar-onset ALS, predicting ALS severity and potentially determining the location of disease onset
- Author
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Kim, Harper S., Son, John, Lee, Donghwan, Tsai, Joy, Wang, Danny, Chocron, E. Sandra, Jeong, Seongwoo, Kittrell, Pamela, Murchison, Charles F., Kennedy, Richard E., Tobon, Alejandro, Jackson, Carlayne E., and Pickering, Andrew M.
- Published
- 2022
- Full Text
- View/download PDF
4. Subsyndromes and symptom clusters: Multilevel factor analysis of behavioral and psychological symptoms of dementia with intensive longitudinal data.
- Author
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Pickering, Carolyn E. Z., Winstead, Vicki, Yildiz, Mustafa, Wang, Danny, Yefimova, Maria, and Pickering, Andrew M.
- Abstract
INTRODUCTION: Behavioral and psychological symptoms in dementia (BPSD) are dynamic phenomena with a high amount of intraindividual variability. We applied a multilevel framework to identify subsyndromes (between‐person factors) that represent clinically relevant profiles of BPSD and identify symptom clusters (within‐person factors) that represent contextually driven daily symptom experiences. METHODS: This study used an intensive longitudinal design in which 68 co‐residing family caregivers to persons living with dementia were recruited to proxy report on their care recipient's daily symptom experiences of 23 different BPSD for eight consecutive days (n = 443 diaries). A multilevel exploratory/confirmatory factor analysis was used to account for nested data and separate within‐person variances from between‐level factor estimates. RESULTS: Exploratory factor analysis identified a 4‐between 3‐within factor structure based on fit statistics and clinical interpretability. DISCUSSION: This study offers major methodological and conceptual advancements for management of BPSD within Alzheimer's disease and related dementias by introducing two related but distinct concepts of subsyndromes and symptom clusters. Highlights: Because behavioral and psychological symptoms of dementia (BPSD) are dynamic temporal phenomenon, this introduces measurement error into aggregate group‐level estimates when trying to create subsyndromes. We propose a multilevel analysis to provide a more valid and reliable estimation by separating out variance due to within‐person daily fluctuations.Using a multilevel exploratory factor analysis with intensive longitudinal data, we identified distinct and meaningful groups of BPSD. The four factors at the between‐person level represented subsyndromes that are based on how BPSD co‐occurred among persons with Alzheimer's disease (AD). These subsyndromes are clinically relevant because they share features of established clinical phenomena and may have similar neurobiological etiologies.We also found three within‐person factors representing distinct symptom clusters. They are based on how BPSD clustered together on a given day for an individual with AD and related dementias. These clusters may have shared environmental triggers. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
5. Tumour-reprogrammed stromal BCAT1 fuels branched-chain ketoacid dependency in stromal-rich PDAC tumours
- Author
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Zhu, Ziwen, Achreja, Abhinav, Meurs, Noah, Animasahun, Olamide, Owen, Sarah, Mittal, Anjali, Parikh, Pooja, Lo, Ting-Wen, Franco-Barraza, Janusz, Shi, Jiaqi, Gunchick, Valerie, Sherman, Mara H., Cukierman, Edna, Pickering, Andrew M., Maitra, Anirban, Sahai, Vaibhav, Morgan, Meredith A., Nagrath, Sunitha, Lawrence, Theodore S., and Nagrath, Deepak
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- 2020
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6. Cause or casualty: The role of mitochondrial DNA in aging and age-associated disease
- Author
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Chocron, E. Sandra, Munkácsy, Erin, and Pickering, Andrew M.
- Published
- 2019
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7. Lifespan of mice and primates correlates with immunoproteasome expression
- Author
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Pickering, Andrew M., Lehr, Marcus, and Miller, Richard A.
- Subjects
Primates -- Physiological aspects -- Research ,Ubiquitin-proteasome system -- Physiological aspects -- Research ,Life span (Biology) -- Research ,Health care industry - Abstract
There is large variation in lifespan among different species, and there is evidence that modulation of proteasome function may contribute to longevity determination. Comparative biology provides a powerful tool for identifying genes and pathways that control the rate of aging. Here, we evaluated skin-derived fibroblasts and demonstrate that among primate species, longevity correlated with an elevation in proteasomal activity as well as immunoproteasome expression at both the mRNA and protein levels. Immunoproteasome enhancement occurred with a concurrent increase in other elements involved in MHC class I antigen presentation, including [beta]-2 microglobulin, (TAP1), and TAP2. Fibroblasts from long-lived primates also appeared more responsive to IFN-[gamma] than cells from short-lived primate species, and this increase in IFN-[gamma] responsiveness correlated with elevated expression of the IFN-[gamma] receptor protein IFNGR2. Elevation of immunoproteasome and proteasome activity was also observed in the livers of long-lived Snell dwarf mice and in mice exposed to drugs that have been shown to extend lifespan, including rapamycin, 17-[alpha]-estradiol, and nordihydroguaiaretic acid. This work suggests that augmented immunoproteasome function may contribute to lifespan differences in mice and among primate species., Introduction Within the animal kingdom there is extraordinary variation in lifespan. Members of some species only live a few days or weeks, while others live tens, if not hundreds, of [...]
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- 2015
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8. Fibroblasts From Longer-Lived Species of Primates, Rodents, Bats, Carnivores, and Birds Resist Protein Damage
- Author
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Pickering, Andrew M., Lehr, Marcus, Kohler, William J., Han, Melissa L., and Miller, Richard A.
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- 2015
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9. Oxidative stress adaptation with acute, chronic, and repeated stress
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Pickering, Andrew M., Vojtovich, Lesya, Tower, John, and A. Davies, Kelvin J.
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- 2013
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10. A simple fluorescence labeling method for studies of protein oxidation, protein modification, and proteolysis
- Author
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Pickering, Andrew M. and Davies, Kelvin J.A.
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- 2012
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11. Mitochondrial thioredoxin reductase 2 is elevated in long-lived primate as well as rodent species and extends fly mean lifespan.
- Author
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Pickering, Andrew M., Lehr, Marcus, Gendron, Christi M., Pletcher, Scott D., and Miller, Richard A.
- Subjects
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THIOREDOXIN reductase (NADPH) , *MITOCHONDRIAL physiology , *PRIMATE genetics , *OXIDATION of proteins , *GENETIC overexpression - Abstract
In a survey of enzymes related to protein oxidation and cellular redox state, we found activity of the redox enzyme thioredoxin reductase ( TXNRD) to be elevated in cells from long-lived species of rodents, primates, and birds. Elevated TXNRD activity in long-lived species reflected increases in the mitochondrial form, TXNRD2, rather than the cytosolic forms TXNRD1 and TXNRD3. Analysis of published RNA-Seq data showed elevated TXNRD2 mRNA in multiple organs of longer-lived primates, suggesting that the phenomenon is not limited to skin-derived fibroblasts. Elevation of TXNRD2 activity and protein levels was also noted in liver of three different long-lived mutant mice, and in normal male mice treated with a drug that extends lifespan in males. Overexpression of mitochondrial TXNRD2 in Drosophila melanogaster extended median (but not maximum) lifespan in female flies with a small lifespan extension in males; in contrast, overexpression of the cytosolic form, TXNRD1, did not produce a lifespan extension. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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12. A conserved role for the 20S proteasome and Nrf2 transcription factor in oxidative stress adaptation in mammals, Caenorhabditis elegans and Drosophila melanogaster.
- Author
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Pickering, Andrew M., Staab, Trisha A., Tower, John, Sieburth, Derek, and Davies, Kelvin J. A.
- Subjects
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PROTEASOMES , *TRANSCRIPTION factors , *MAMMAL physiology , *OXIDATIVE stress , *CAENORHABDITIS elegans , *DROSOPHILA melanogaster - Abstract
In mammalian cells, hydrogen peroxide (H2O2)-induced adaptation to oxidative stress is strongly dependent on an Nrf2 transcription factor-mediated increase in the 20S proteasome. Here, we report that both Caenorhabdifis elegans nematode worms and Drosophila melanogaster fruit flies are also capable of adapting to oxidative stress with H202 pre-treatment. As in mammalian cells, this adaptive response in worms and flies involves an increase in proteolytic activity and increased expression of the 20S proteasome, but not of the 26S proteasome. We also found that the increase in 20S proteasome expression in both worms and flies, as in mammalian cells, is important for the adaptive response, and that it is mediated by the SKN-1 and CNC-C orthologs of the mammalian Nrf2 transcription factor, respectively. These studies demonstrate that stress mechanisms operative in cell culture also apply in disparate intact organisms across a wide biological diversity. [ABSTRACT FROM AUTHOR]
- Published
- 2013
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13. Differential roles of proteasome and immunoproteasome regulators Pa28αβ, Pa28γ and Pa200 in the degradation of oxidized proteins
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Pickering, Andrew M. and Davies, Kelvin J.A.
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PROTEASOMES , *OXIDATIVE stress , *CHEMICAL decomposition , *FIBROBLASTS , *HYDROGEN peroxide , *PROTEIN fractionation - Abstract
Abstract: The response and functions of proteasome regulators Pa28αβ (or 11S), Pa28γ and Pa200 in oxidative-stress adaptation (also called hormesis) was studied in murine embryonic fibroblasts (MEFs), using a well-characterized model of cellular adaptation to low concentrations (1.0–10.0μM) of hydrogen peroxide (H2O2), which alter gene expression profiles, increasing resistance to higher levels of oxidative-stress. Pa28αβ bound to 20S proteasomes immediately upon H2O2-treatment, whereas 26S proteasomes were disassembled at the same time. Over the next 24h, the levels of Pa28αβ, Pa28γ and Pa200 proteasome regulators increased during H2O2-adaptation, whereas the 19S regulator was unchanged. Purified Pa28αβ, and to a lesser extent Pa28γ, significantly increased the ability of purified 20S proteasome to selectively degrade oxidized proteins; Pa28αβ also increased the capacity of purified immunoproteasome to selectively degrade oxidized proteins but Pa28γ did not. Pa200 regulator actually decreased 20S proteasome and immunoproteasome’s ability to degrade oxidized proteins but Pa200 and poly-ADP ribose polymerase may cooperate in enabling initiation of DNA repair. Our results indicate that cytoplasmic Pa28αβ and nuclear Pa28γ may both be important regulators of proteasome’s ability to degrade oxidatively-damaged proteins, and induced-expression of both 20S proteasome and immunoproteasome, and their Pa28αβ and Pa28γ regulators are important for oxidative-stress adaptation. [Copyright &y& Elsevier]
- Published
- 2012
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14. Nrf2-dependent Induction of Proteasome and Pa28αβ Regulator Are Required for Adaptation to Oxidative Stress.
- Author
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Pickering, Andrew M., Linder, Robert A., Zhang, Hongqiao, Forman, Henry J., and Davies, Kelvin J. A.
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OXIDATIVE stress , *PEROXYNITRITE , *MENADIONE , *GENE expression , *PROTEASOME regulation , *CHROMATIN - Abstract
The ability to adapt to acute oxidative stress (e.g. H2O2, peroxynitrite, menadione, and paraquat) through transient alterations in gene expression is an important component of cellular defense mechanisms. We show that such adaptation includes Nrf2-dependent increases in cellular capacity to degrade oxidized proteins that are attributable to increased expression of the 20 S proteasome and the Pa28αβ (11 S) proteasome regulator. Increased cellular levels of Nrf2, translocation of Nrf2 from the cytoplasm to the nucleus, and increased binding of Nrf2 to antioxidant response elements (AREs) or electrophile response elements (EpREs) in the 5'-untranslated region of the proteasome β5 subunit gene (demonstrated by chromatin immunoprecipitation (or ChIP) assay) are shown to be necessary requirements for increased proteasome/Pa28αβ levels, and for maximal increases in proteolytic capacity and stress resistance; Nrf2 siRNA and the Nrf2 inhibitor retinoic acid both block these adaptive changes and the Nrf2 inducers DL-sulforaphane, lipoic acid, and curcumin all replicate them without oxidant exposure. The immunoproteasome is also induced during oxidative stress adaptation, contributing to overall capacity to degrade oxidized proteins and stress resistance. Two of the three immunoproteasome subunit genes, however, contain no ARE/EpRE elements, and Nrf2 inducers, inhibitors, and siRNA all have minimal effects on immunoproteasome expression during adaptation to oxidative stress. Thus, immunoproteasome appears to be (at most) minimally regulated by the Nrf2 signal transduction pathway. [ABSTRACT FROM AUTHOR]
- Published
- 2012
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15. New Peptide-Based Pharmacophore Activates 20S Proteasome.
- Author
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Osmulski, Paweł A., Karpowicz, Przemysław, Jankowska, Elżbieta, Bohmann, Jonathan, Pickering, Andrew M., Gaczyńska, Maria, Tepe, Jetze J., and McPhee, Derek J.
- Subjects
PROTEASOMES ,TAT protein ,SMALL molecules ,SYNTHETIC proteins ,MOLECULAR docking ,BINDING sites - Abstract
The proteasome is a pivotal element of controlled proteolysis, responsible for the catabolic arm of proteostasis. By inducing apoptosis, small molecule inhibitors of proteasome peptidolytic activities are successfully utilized in treatment of blood cancers. However, the clinical potential of proteasome activation remains relatively unexplored. In this work, we introduce short TAT peptides derived from HIV-1 Tat protein and modified with synthetic turn-stabilizing residues as proteasome agonists. Molecular docking and biochemical studies point to the α1/α2 pocket of the core proteasome α ring as the binding site of TAT peptides. We postulate that the TATs' pharmacophore consists of an N-terminal basic pocket-docking "activation anchor" connected via a β turn inducer to a C-terminal "specificity clamp" that binds on the proteasome α surface. By allosteric effects—including destabilization of the proteasomal gate—the compounds substantially augment activity of the core proteasome in vitro. Significantly, this activation is preserved in the lysates of cultured cells treated with the compounds. We propose that the proteasome-stimulating TAT pharmacophore provides an attractive lead for future clinical use. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
16. Neuronal‐specific proteasome augmentation via Prosβ5 overexpression extends lifespan and reduces age‐related cognitive decline.
- Author
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Munkácsy, Erin, Chocron, E. Sandra, Quintanilla, Laura, Gendron, Christi M., Pletcher, Scott D., and Pickering, Andrew M.
- Subjects
ZOOLOGY ,CELLULAR aging ,DROSOPHILA melanogaster ,NERVOUS system ,OXIDATIVE stress - Abstract
Cognitive function declines with age throughout the animal kingdom, and increasing evidence shows that disruption of the proteasome system contributes to this deterioration. The proteasome has important roles in multiple aspects of the nervous system, including synapse function and plasticity, as well as preventing cell death and senescence. Previous studies have shown neuronal proteasome depletion and inhibition can result in neurodegeneration and cognitive deficits, but it is unclear if this pathway is a driver of neurodegeneration and cognitive decline in aging. We report that overexpression of the proteasome β5 subunit enhances proteasome assembly and function. Significantly, we go on to show that neuronal‐specific proteasome augmentation slows age‐related declines in measures of learning, memory, and circadian rhythmicity. Surprisingly, neuronal‐specific augmentation of proteasome function also produces a robust increase of lifespan in Drosophila melanogaster. Our findings appear specific to the nervous system; ubiquitous proteasome overexpression increases oxidative stress resistance but does not impact lifespan and is detrimental to some healthspan measures. These findings demonstrate a key role of the proteasome system in brain aging. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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17. Genetic and pharmacologic proteasome augmentation ameliorates Alzheimer's-like pathology in mouse and fly APP overexpression models.
- Author
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Chocron, E. Sandra, Munkácsy, Erin, Kim, Harper S., Karpowicz, Przemyslaw, Nisi Jiang, Van Skike, Candice E., DeRosa, Nicholas, Banh, Andy Q., Palavicini, Juan P., Wityk, Paweł, Kalinowski, Leszek, Galvan, Veronica, Osmulski, Pawel A., Jankowska, Elzbieta, Gaczynska, Maria, and Pickering, Andrew M.
- Subjects
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PROTEASOMES , *GREEN fluorescent protein , *GENETIC overexpression , *AMYLOID beta-protein , *AMYLOID beta-protein precursor , *TAT protein - Abstract
The article presents a study which explores the genetic and pharmacologic proteasome augmentation ameliorates Alzheimer's-like pathology in mouse and fly APP overexpression models. It mentions that proteasome has key roles in neuronal proteostasis, including the removal of misfolded and oxidized proteins, presynaptic protein turnover, and synaptic efficacy and plasticity.
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- 2022
- Full Text
- View/download PDF
18. HSP70 mediates dissociation and reassociation of the 26S proteasome during adaptation to oxidative stress
- Author
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Grune, Tilman, Catalgol, Betül, Licht, Anke, Ermak, Gennady, Pickering, Andrew M., Ngo, Jenny K., and Davies, Kelvin J.A.
- Subjects
- *
MOLECULAR chaperones , *MULTIENZYME complexes , *OXIDATIVE stress , *DISSOCIATION (Chemistry) , *CELLULAR signal transduction , *CELL metabolism , *FIBROBLASTS , *CHLOROACETIC acids - Abstract
Abstract: We report an entirely new role for the HSP70 chaperone in dissociating 26S proteasome complexes (into free 20S proteasomes and bound 19S regulators), preserving 19S regulators, and reconstituting 26S proteasomes in the first 1–3h after mild oxidative stress. These responses, coupled with direct 20S proteasome activation by poly(ADP ribose) polymerase in the nucleus and by PA28αβ in the cytoplasm, instantly provide cells with increased capacity to degrade oxidatively damaged proteins and to survive the initial effects of stress exposure. Subsequent adaptive (hormetic) processes (3–24h after stress exposure), mediated by several signal transduction pathways and involving increased transcription/translation of 20S proteasomes, immunoproteasomes, and PA28αβ, abrogate the need for 26S proteasome dissociation. During this adaptive period, HSP70 releases its bound 19S regulators, 26S proteasomes are reconstituted, and ATP-stimulated proteolysis is restored. The 26S proteasome-dependent, and ATP-stimulated, turnover of ubiquitinylated proteins is essential for normal cell metabolism, and its restoration is required for successful stress adaptation. [Copyright &y& Elsevier]
- Published
- 2011
- Full Text
- View/download PDF
19. Subsyndromes and symptom clusters: Multilevel factor analysis of behavioral and psychological symptoms of dementia with intensive longitudinal data.
- Author
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Pickering CEZ, Winstead V, Yildiz M, Wang D, Yefimova M, and Pickering AM
- Subjects
- Humans, Longitudinal Studies, Male, Female, Factor Analysis, Statistical, Aged, Aged, 80 and over, Behavioral Symptoms etiology, Multilevel Analysis, Middle Aged, Dementia psychology, Caregivers psychology
- Abstract
Introduction: Behavioral and psychological symptoms in dementia (BPSD) are dynamic phenomena with a high amount of intraindividual variability. We applied a multilevel framework to identify subsyndromes (between-person factors) that represent clinically relevant profiles of BPSD and identify symptom clusters (within-person factors) that represent contextually driven daily symptom experiences., Methods: This study used an intensive longitudinal design in which 68 co-residing family caregivers to persons living with dementia were recruited to proxy report on their care recipient's daily symptom experiences of 23 different BPSD for eight consecutive days (n = 443 diaries). A multilevel exploratory/confirmatory factor analysis was used to account for nested data and separate within-person variances from between-level factor estimates., Results: Exploratory factor analysis identified a 4-between 3-within factor structure based on fit statistics and clinical interpretability., Discussion: This study offers major methodological and conceptual advancements for management of BPSD within Alzheimer's disease and related dementias by introducing two related but distinct concepts of subsyndromes and symptom clusters., Highlights: Because behavioral and psychological symptoms of dementia (BPSD) are dynamic temporal phenomenon, this introduces measurement error into aggregate group-level estimates when trying to create subsyndromes. We propose a multilevel analysis to provide a more valid and reliable estimation by separating out variance due to within-person daily fluctuations. Using a multilevel exploratory factor analysis with intensive longitudinal data, we identified distinct and meaningful groups of BPSD. The four factors at the between-person level represented subsyndromes that are based on how BPSD co-occurred among persons with Alzheimer's disease (AD). These subsyndromes are clinically relevant because they share features of established clinical phenomena and may have similar neurobiological etiologies. We also found three within-person factors representing distinct symptom clusters. They are based on how BPSD clustered together on a given day for an individual with AD and related dementias. These clusters may have shared environmental triggers., (© 2024 The Author(s). Alzheimer's & Dementia published by Wiley Periodicals LLC on behalf of Alzheimer's Association.)
- Published
- 2024
- Full Text
- View/download PDF
20. The proteasome: A key modulator of nervous system function, brain aging, and neurodegenerative disease.
- Author
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Davidson K and Pickering AM
- Abstract
The proteasome is a large multi-subunit protease responsible for the degradation and removal of oxidized, misfolded, and polyubiquitinated proteins. The proteasome plays critical roles in nervous system processes. This includes maintenance of cellular homeostasis in neurons. It also includes roles in long-term potentiation via modulation of CREB signaling. The proteasome also possesses roles in promoting dendritic spine growth driven by proteasome localization to the dendritic spines in an NMDA/CaMKIIα dependent manner. Proteasome inhibition experiments in varied organisms has been shown to impact memory, consolidation, recollection and extinction. The proteasome has been further shown to impact circadian rhythm through modulation of a range of 'clock' genes, and glial function. Proteasome function is impaired as a consequence both of aging and neurodegenerative diseases. Many studies have demonstrated an impairment in 26S proteasome function in the brain and other tissues as a consequence of age, driven by a disassembly of 26S proteasome in favor of 20S proteasome. Some studies also show proteasome augmentation to correct age-related deficits. In amyotrophic lateral sclerosis Alzheimer's, Parkinson's and Huntington's disease proteasome function is impaired through distinct mechanisms with impacts on disease susceptibility and progression. Age and neurodegenerative-related deficits in the function of the constitutive proteasome are often also accompanied by an increase in an alternative form of proteasome called the immunoproteasome. This article discusses the critical role of the proteasome in the nervous system. We then describe how proteasome dysfunction contributes to brain aging and neurodegenerative disease., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Davidson and Pickering.)
- Published
- 2023
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21. Protein translation paradox: Implications in translational regulation of aging.
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Kim HS and Pickering AM
- Abstract
Protein translation is an essential cellular process playing key roles in growth and development. Protein translation declines over the course of age in multiple animal species, including nematodes, fruit flies, mice, rats, and even humans. In all these species, protein translation transiently peaks in early adulthood with a subsequent drop over the course of age. Conversely, lifelong reductions in protein translation have been found to extend lifespan and healthspan in multiple animal models. These findings raise the protein synthesis paradox: age-related declines in protein synthesis should be detrimental, but life-long reductions in protein translation paradoxically slow down aging and prolong lifespan. This article discusses the nature of this paradox and complies an extensive body of work demonstrating protein translation as a modulator of lifespan and healthspan., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Kim and Pickering.)
- Published
- 2023
- Full Text
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22. Proline- and Arginine-Rich Peptides as Flexible Allosteric Modulators of Human Proteasome Activity.
- Author
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Giżyńska M, Witkowska J, Karpowicz P, Rostankowski R, Chocron ES, Pickering AM, Osmulski P, Gaczynska M, and Jankowska E
- Subjects
- Allosteric Regulation, Amino Acid Sequence, Arginine chemistry, Binding Sites, Drug Design, Enzyme Inhibitors chemistry, Enzyme Inhibitors metabolism, Humans, Peptides chemical synthesis, Peptides metabolism, Proline chemistry, Proteasome Endopeptidase Complex metabolism, Peptides chemistry, Proteasome Endopeptidase Complex chemistry
- Abstract
Proline- and arginine-rich peptide PR11 is an allosteric inhibitor of 20S proteasome. We modified its sequence inter alia by introducing HbYX, RYX, or RHbX C-terminal extensions (Hb, hydrophobic moiety; R, arginine; Y, tyrosine; X, any residue). Consequently, we were able to improve inhibitory potency or to convert inhibitors into strong activators: the former with an aromatic penultimate Hb residue and the latter with the HbYX motif. The PR peptide activator stimulated 20S proteasome in vitro to efficiently degrade protein substrates, such as α-synuclein and enolase, but also activated proteasome in cultured fibroblasts. The positive and negative PR modulators differently influenced the proteasome conformational dynamics and affected opening of the substrate entry pore. The resolved crystal structure showed PR inhibitor bound far from the active sites, at the proteasome outer face, in the pocket used by natural activators. Our studies indicate the opportunity to tune proteasome activity by allosteric regulators based on PR peptide scaffold.
- Published
- 2019
- Full Text
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23. Degradation of damaged proteins: the main function of the 20S proteasome.
- Author
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Pickering AM and Davies KJ
- Subjects
- Aging metabolism, Animals, Free Radicals metabolism, Humans, Oxidation-Reduction, Proteasome Endopeptidase Complex chemistry, Proteins metabolism, Proteasome Endopeptidase Complex metabolism, Proteolysis
- Abstract
Cellular proteins are exposed to oxidative modification and other forms of damage through oxidative stress and disease, and as a consequence of aging. This oxidative damage results in loss and/or modification of protein function, which in turn compromises cell function and may even cause cell death. Therefore, the removal of damaged proteins is extremely important for the maintenance of normal cell function. The 20S proteasome functions primarily as a system for removal of such damaged proteins. Unlike the 26S proteasome, the 20S proteasome exhibits a high degree of selectivity in degrading the oxidized, or otherwise damaged, forms of cell proteins. The 20S proteasome is broadly distributed throughout the cell and has a range of specific functions in different organelles, which are controlled through a number of proteasome regulators. It is also activated, and its synthesis is induced, under conditions of enhanced oxidative stress, thus permitting greater removal of damaged proteins., (Copyright © 2012 Elsevier Inc. All rights reserved.)
- Published
- 2012
- Full Text
- View/download PDF
24. The immunoproteasome, the 20S proteasome and the PA28αβ proteasome regulator are oxidative-stress-adaptive proteolytic complexes.
- Author
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Pickering AM, Koop AL, Teoh CY, Ermak G, Grune T, and Davies KJ
- Subjects
- Aging metabolism, Animals, Cell Line, Cell Proliferation drug effects, DNA Replication drug effects, Enzyme Induction drug effects, Humans, Hydrogen Peroxide toxicity, Mice, Osmolar Concentration, Oxidants toxicity, Oxidation-Reduction, Proteasome Endopeptidase Complex genetics, Proteasome Endopeptidase Complex isolation & purification, Protein Carbonylation drug effects, Proteins genetics, RNA, Small Interfering, Adaptation, Physiological, Oxidative Stress drug effects, Proteasome Endopeptidase Complex biosynthesis, Proteins metabolism
- Abstract
Oxidized cytoplasmic and nuclear proteins are normally degraded by the proteasome, but accumulate with age and disease. We demonstrate the importance of various forms of the proteasome during transient (reversible) adaptation (hormesis), to oxidative stress in murine embryonic fibroblasts. Adaptation was achieved by 'pre-treatment' with very low concentrations of H2O2, and tested by measuring inducible resistance to a subsequent much higher 'challenge' dose of H2O2. Following an initial direct physical activation of pre-existing proteasomes, the 20S proteasome, immunoproteasome and PA28αβ regulator all exhibited substantially increased de novo synthesis during adaptation over 24 h. Cellular capacity to degrade oxidatively damaged proteins increased with 20S proteasome, immunoproteasome and PA28αβ synthesis, and was mostly blocked by the 20S proteasome, immunoproteasome and PA28 siRNA (short interfering RNA) knockdown treatments. Additionally, PA28αβ-knockout mutants achieved only half of the H2O2-induced adaptive increase in proteolytic capacity of wild-type controls. Direct comparison of purified 20S proteasome and immunoproteasome demonstrated that the immunoproteasome can selectively degrade oxidized proteins. Cell proliferation and DNA replication both decreased, and oxidized proteins accumulated, during high H2O2 challenge, but prior H2O2 adaptation was protective. Importantly, siRNA knockdown of the 20S proteasome, immunoproteasome or PA28αβ regulator blocked 50-100% of these adaptive increases in cell division and DNA replication, and immunoproteasome knockdown largely abolished protection against protein oxidation.
- Published
- 2010
- Full Text
- View/download PDF
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