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Plankton are a pivotal component of the diversity and functioning of coastal marine ecosystems. A long time-series of observations is the best tool to trace their patterns and variability over multiple scales, ultimately providing a sound foundation for assessing, modelling and predicting the effects of anthropogenic and natural environmental changes on pelagic communities. At the same time, a long time-series constitutes a formidable asset for different kinds of research on specific questions that emerge from the observations, whereby the results of these complementary studies provide precious interpretative tools that augment the informative value of the data collected. In this paper, we review more than 140 studies that have been developed around a Mediterranean plankton time series gathered in the Gulf of Naples at the station LTER-MC since 1984. These studies have addressed different topics concerning marine plankton, which have included: i) seasonal patterns and trends; ii) taxonomic diversity, with a focus on key or harmful algal species and the discovery of many new taxa; iii) molecular diversity of selected species, groups of species or the whole planktonic community; iv) life cycles of several phyto- and zooplankton species; and v) interactions among species through trophic relationships, parasites and viruses. Overall, the products of this research demonstrate the great value of time series besides the record of fluctuations and trends, and highlight their primary role in the development of the scientific knowledge of plankton much beyond the local scale.

ABSTRACT Objetivo: Maturity onset diabetes of the young (MODY) patients have clinical heterogeneity as shown by many studies. Thus, often it is misdiagnosed to type 1 or type 2 diabetes(T2DM). The aim of this study is to evaluate MODY mutations in adult T2DM patients suspicious in terms of MODY, and to show clinical and laboratory differences between these two situations. Subjects and methods: In this study, we analyzed 72 type 2 diabetic patients and their relatives (35F/37M) who had been suspected for MODY and referred to genetic department for mutation analysis. The gene mutations for MODY have been assessed in the laboratory of Marmara University genetics. Totally 67 (32F/35M; median age 36.1) diabetic patients were analyzed for 7 MODY mutations. Twelve patients who have uncertain mutation (VUS) were excluded from study for further evaluation. MODY(+) (n:30) patients and T2DM patients (n:25) were compared for clinical and laboratory parameters. Results: In MODY(+) subjects, mutations in GCK (MODY 2) (n:12; 40%) were the most common followed by HNF4A (MODY 1) (n:4; 13.3%). Diabetes diagnosis age was younger in MODY(+) group but not statistically significant. Sixty-six percent of MODY(+) subjects had diabetes history at 3-consecutive generations in their family compared with 28% of T2DM patients statistically significant (p:0.006). Gender, BMI, C-peptide, HbA1c, lipid parameters, creatinine, GFR, microalbuminuria, vitamin D and calcium were not statistically different between the groups. Conclusion: According to present study results, MODY mutation positivity is most probable in young autoantibody (-) diabetic patients diagnosed before 30 years of age, who have first degree family history of diabetes.

Spectra of positively charged secondary ions from thermally grown SiO[sub 2] films were recorded in a time-of-flight secondary ion mass spectrometry scheme. Ablation of cluster ions was induced by the impact of slow (4 keV/u) Au[sup 69+] projectiles. The intensities of Si[sub x]O[sub y]H[sub z][sup +], (x=1-22, y=1-44, z=0-7) clusters are found to depend sensitively on the oxygen to silicon ratio and also on the hydrogen content. We find that oxygen rich clusters, y=2x+1, and, in one case, y=2x+2, can be stabilized by the incorporation of two additional hydrogen atoms in the cluster. © 2000 American Institute of Physics. [ABSTRACT FROM AUTHOR]

The dissociation of fast nitrogen molecules with kinetic energies ranging from 200 to 2000 eV/atom was studied for grazing collisions with various fcc surfaces. At these energies, the dissociation is caused by vibrational and rotational excitation, the latter being favored for scattering along the surface semichannels. N[sub 2] is chemically inert and interacts mainly elastically with the surfaces. A controversial question is the role of the dynamic screening of the molecular constituents by the bulk electron gas during the dissociation process. Another interesting issue is the dependence of the dissociation probability on the azimuthal scattering angle--the fragmentation is highest for the low indexed direction. We treat both problems, by comparing results obtained from the different surfaces Pd(110), Ag(110), and Pt(110). The experimental data are compared to molecular dynamics simulations based on realistic interaction potentials as obtained from density functional theory calculations. The potentials are improved by adding an explicit dependence of the intramolecular bond strength on the molecule surface distance z, which leads to excellent agreement of experiment and simulations. © 2000 American Institute of Physics. [ABSTRACT FROM AUTHOR]

Plankton are a pivotal component of the diversity and functioning of coastal marine ecosystems. A long time-series of observations is the best tool to trace their patterns and variability over multiple scales, ultimately providing a sound foundation for assessing, modelling and predicting the effects of anthropogenic and natural environmental changes on pelagic communities. At the same time, a long time-series constitutes a formidable asset for different kinds of research on specific questions that emerge from the observations, whereby the results of these complementary studies provide precious interpretative tools that augment the informative value of the data collected. In this paper, we review more than 140 studies that have been developed around a Mediterranean plankton time series gathered in the Gulf of Naples at the station LTER-MC since 1984. These studies have addressed different topics concerning marine plankton, which have included: i) seasonal patterns and trends; ii) taxonomic diversity, with a focus on key or harmful algal species and the discovery of many new taxa; iii) molecular diversity of selected species, groups of species or the whole planktonic community; iv) life cycles of several phyto- and zooplankton species; and v) interactions among species through trophic relationships, parasites and viruses. Overall, the products of this research demonstrate the great value of time series besides the record of fluctuations and trends, and highlight their primary role in the development of the scientific knowledge of plankton much beyond the local scale. [ABSTRACT FROM AUTHOR]

Background: Efficient perception of attacking pathogens is essential for plants. Plant defense is evoked by molecules termed elicitors. Endogenous elicitors or damage-associated molecular patterns (DAMPs) originate from plant materials upon injury or pathogen activity. While there are comparably well-characterized examples for DAMPs, often oligogalacturonides (OGAs), generated by the activity of fungal pathogens, endogenous elicitors evoked by bacterial pathogens have been rarely described. In particular, the signal perception and transduction processes involved in DAMP generation are poorly characterized. Results: A mutant strain of the phytopathogenic bacterium Xanthomonas campestris pv. campestris deficient in exbD2, which encodes a component of its unusual elaborate TonB system, had impaired pectate lyase activity and caused no visible symptoms for defense on the non-host plant pepper (Capsicum annuum). A co-incubation of X. campestris pv. campestris with isolated cell wall material from C. annuum led to the release of compounds which induced an oxidative burst in cell suspension cultures of the non-host plant. Lipopolysaccharides and proteins were ruled out as elicitors by polymyxin B and heat treatment, respectively. After hydrolysis with trifluoroacetic acid and subsequent HPAE chromatography, the elicitor preparation contained galacturonic acid, the monosaccharide constituent of pectate. OGAs were isolated from this crude elicitor preparation by HPAEC and tested for their biological activity. While small OGAs were unable to induce an oxidative burst, the elicitor activity in cell suspension cultures of the non-host plants tobacco and pepper increased with the degree of polymerization (DP). Maximal elicitor activity was observed for DPs exceeding 8. In contrast to the X. campestris pv. campestris wild type B100, the exbD2 mutant was unable to generate elicitor activity from plant cell wall material or from pectin. Conclusions: To our knowledge, this is the second report on a DAMP generated by bacterial features. The generation of the OGA elicitor is embedded in a complex exchange of signals within the framework of the plant-microbe interaction of C. annuum and X. campestris pv. campestris. The bacterial TonB-system is essential for the substrate-induced generation of extracellular pectate lyase activity. This is the first demonstration that a TonB-system is involved in bacterial trans-envelope signaling in the context of a pathogenic interaction with a plant. [ABSTRACT FROM AUTHOR]

Abstract  The methylenetetrahydrafolate reductase (MTHFR) enzyme may influence cancer development by affecting DNA methylation, synthesis and repair. The MTHFR 677C→T single nucleotide polymorphism (SNP) has been associated with decreased enzyme activity and has therefore been implicated in cancer development. We analyzed the MTHFR 677C→T SNP in 2,777 incident prostate cancer cases and 1,639 population controls from the CAncer Prostate in Sweden study (CAPS). No significant association was found overall between prostate cancer risk and the 677C→T SNP (p = 0.27) with heterozygote (CT) and homozygote (TT) allele carriers showing ORs of 1.12 (95% CI: 0.98–1.27) and 1.02 (95% CI: 0.80–1.30), respectively. In the subgroup of low risk prostate cancer, heterozygote—but not homozygote—allele carriers displayed a slight over-risk with an OR of 1.21 (95% CI: 1.03–1.41). Among men under 65 years of age, the 677C→T SNP was associated with prostate cancer risk (p = 0.007), with odds ratios of 1.33 (95% CI: 1.09–1.63) for heterozygote allele carriers and 0.86 (95% CI: 0.6–1.24) for homozygote allele carriers. However, this association was attributed to a shift in the genotype distribution in the young controls. In conclusion, our results do not provide strong support for the hypothesis that the MTHFR 677C→T polymorphism is related to prostate cancer risk. [ABSTRACT FROM AUTHOR]

In this study, some thermodynamic properties of poly(2‐[3‐(6‐tetralino)‐3‐methyl‐1‐cyclobutyl]‐2‐hydroxy ethyl methacrylate) P (TMCBHEMA) and poly[2‐(3‐mesityl‐3‐methyl‐1‐cyclobutyl)‐2‐oxoethyl methacrylate) P (MCBOEMA) such as the adsorption enthalpy, ΔHa, molar evaporation enthalpy, ΔHv, the sorption enthalpy, ΔH1s, sorption free energy, ΔG1s, sorption entropy, ΔS1s, the partial molar free energy, ΔG1∞, the partial molar heat of mixing, ΔH¯1∞, at infinite dilution were determined for the interactions of PTMCBHEMA and PMCBOEMA with selected alcohols and alkanes by the inverse gas chromatography (IGC) method in the temperature range of 333–463 K. According to the specific retention volumes, Vg0, the weight fraction activity coefficients of solute probes at infinite dilution, Ω1∞, and Flory‐Huggins interaction parameters, χ∞12 between PTMCBHEMA and PMCBOEMA‐solvents were determined in 433–463K and 443–463K, respectively. According to Ω1∞ and χ∞12, selected alcohols and alkanes were found to be non‐solvent for PTMCBHEMA at 433–463 K, but the same solvents (except for decane) were found to be solvent for PMCBOEMA at 443–463K. The glass transition temperature, Tg, of the PTMCBHEMA and PMCBOEMA found to be 380 and 383; 390 K and 388 K, by IGC and DSC techniques, respectively. [ABSTRACT FROM AUTHOR]

This study investigates the intricate effects of lithology, temperature, discharge, and land use changes on headwater stream chemistry by analysing two decades of hydrochemical data from twenty karst headwater catchments in the Garonne River basin, France. Focused on the Pyrenees and the lowland (LM) and upland (UM) regions of the Massif Central, this study identified significant regional variations and commonalities in water chemistry. The headwater streams were clustered based on their hydrological and hydrochemical profiles, revealing strong similarities between upland sites, i.e. UM and Pyrenees, despite their geographical distance. The findings revealed a predominance of water driven by calcite dissolution, with specific influences from minor lithologies. Seasonal variations in water chemistry were primarily driven by hydrological conditions. Trend analyses highlighted increased pCO 2 concentration in both the Pyrenees and UM, linked to higher forest density and agricultural activities, respectively. In contrast, LM exhibited increasing Ca 2+ and HCO 3 - concentrations alongside decreasing trends in pCO 2 and discharge, and increased nitrate concentration. While overall water temperatures increase, only a few sites exhibited significant warming trends, consistent with similar studies in the region and worldwide. These findings underscore the complex interplay between land use changes and hydrochemical dynamics in karst headwaters. They reveal that rising pCO 2 concentration trends in upland regions are driven by reforestation and agricultural practices, which have significant implications in CO 2 emissions, and consequently for regional and global carbon budgets and carbon-related policies. In lowland areas, declining water resources and increasing ion concentrations highlight potential challenges for water management, particularly in sensitive karst catchments. This study provides a baseline for understanding how karst headwaters respond to environmental changes. Expanding this research to other karst systems worldwide, under different climates, would help validate and model these findings, and improve our understanding of the global carbon cycle., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Authors. Published by Elsevier B.V. All rights reserved.)

Scientists must have an integrative understanding of ecology and evolution across spatial and temporal scales to predict how species will respond to global change. Although comprehensively investigating these processes in nature is challenging, the infrastructure and data from long-term ecological research networks can support cross-disciplinary investigations. We propose using these networks to advance our understanding of fundamental evolutionary processes and responses to global change. For ecologists, we outline how long-term ecological experiments can be expanded for evolutionary inquiry, and for evolutionary biologists, we illustrate how observed long-term ecological patterns may motivate new evolutionary questions. We advocate for collaborative, multi-site investigations and discuss barriers to conducting evolutionary work at network sites. Ultimately, these networks offer valuable information and opportunities to improve predictions of species' responses to global change., (© 2024. Springer Nature Limited.)

The development of high-throughput sequencing has greatly improved our knowledge of microbial diversity in aquatic environments and its evolution in highly diverse ecosystems. Relevant microbial diversity description based on high-throughput sequencing relies on the good quality of the nucleic acid recovered. Indeed, long genetic fragments are more informative for identifying mutation combinations that characterize variants or species in complex samples. This study describes a new analytical method based on digital Polymerase Chain Reaction (PCR) partitioning technology for assessing the fragmentation of nucleic acid and more specifically viral RNA. This method allows us to overcome limits associated with hydrolysis probe-based assay by focusing on the distance between different amplicons, and not, as usual, on the size of amplicons. RNA integrity can thus be determined as a new fragmentation index, the so-called Fragment size 50. The application of this method has provided information on issues that are inherent in environmental analyses, such as the storage impact of raw samples or extracted RNA, extraction methods, and the nature of the sample on the integrity of viral RNA. Finally, the estimation of fragment size by digital PCR (dPCR) showed a very strong similarity with the fragment size sequenced using Oxford Nanopore Technology. In addition to enabling objective improvements in analytical methods, this approach could become a systematic quality control prior to any long-read sequencing, avoiding insufficiently productive sequencing runs or biases in the representativeness of sequenced fragments., (© The Author(s) 2024. Published by Oxford University Press.)

Platforms are structures built by coypus for various purposes, such as reproduction, resting, and thermoregulation. In a coastal wetland of central Italy, during a study aimed at investigating the characteristics of coypu's platforms, it was recorded, for the first time worldwide, the presence of plastic in these structures. Through a transect survey, we censused 83 platforms, among which three (3.61%) were found with presence of macro- and megaplastics (polystyrene, polypropylene, and low-density polyethylene in film form; polyester, polyamide, and expanded polystyrene in fragments). Through the FTIR spectra, it was possible to highlight the degradation of the polymeric materials. To stimulate possible in-depth investigations at the level of the food chain (e.g., coypu predators, including canids) in wet habitats, we discussed possible causes and implications of plastic presence in coypus' nest structures., (© 2024. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)

Plastic pollution in terrestrial and freshwater environments and its accumulation along food chains has been poorly studied in birds. The Barn owl (Tyto alba) is an opportunistic and nocturnal apex predator feeding mostly on small mammals. In this note, we reported evidence of microplastics (MPs) contamination in Barn owl pellets collected, for the first time, in two sites with different levels of anthropization (low: natural landscape mosaic vs. high extensive croplands). The following polymers have been recorded: polyvinylchloride (PVC), polyethylene (PE), expanded polyester (EPS), polyethylene terephthalate (PET), polybutylene terephthalate (PBT), polyester (PL), viscose, and starch-based biopolymer. We found significant higher MPs frequency in the most anthropized site. Our results suggest that pellet' analysis may represent a cost-effective method for monitoring MP contamination along food chains in terrestrial ecosystems., (© 2024. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)

Coastal wetlands represent areas that can testify historical accumulation of litter. We analyzed the anthropogenic litter deposited on the channel bottom of a coastal wetland area that experienced water stress due to extreme summer dryness after about 20 years. We hypothesize that the litter accumulated in the different areas over the years reflects the different social user categories (i.e., fishermen, beach users, hunters) and exposure to meteo-marine events. Our findings highlight that historically accumulated litter is composed of plastics (78.8 %), clothes (8.9 %), and glass (4.9 %). Moreover, litter concentration averages 53.6 items/ha in the 8 sectors. The most found categories were common household items (25.4 %), diverse (professional and consumer) items (24.2 %), and food and beverages packaging (21.4 %). Finally, litter diversity indices and the Detrended Correspondence Analysis showed sector and litter type similarities. We reported for the first time the presence of litter accumulated for 20 years testifying non-more occurring recreational activities., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Authors. Published by Elsevier Ltd.. All rights reserved.)

An assessment of the short-term effects of an outdoor music festival (Jova Beach Party event; July 2019; central Italy) on bird assemblages has been carried out, adopting a BACI (Before-After-Control-Impact) survey design, and using the point counts method both in the impact site (Impact, I; where the concert was held) and in comparable Control site (C). In the I site, data have been stratified both for urban (U) and agro-mosaic (M) habitats. When comparing before and after the music event, in IU site, the species richness and the Hill diversity index decreased, differently from CU where species richness a species abundance increased. Diversity profiles highlighted the impoverishment of bird assemblages after the event, but only in the Impact urban habitats. After the musical event, individual rarefaction curves for richness were lower in IU after the concert, while, differently in CU curves are higher. These data suggest an impact in bird assemblages limited to the urban site, due to the stress mainly induced by high intensity noise pollution. Musical events may disrupt the structure of synanthropic bird assemblages, inducing a dispersal of individuals towards the surrounding landscape. Starling (Sturnus vulgaris) appeared a particularly sensitive bird. However, further efforts are necessary to study the effects of these events at species level., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier Ltd. All rights reserved.)