39 results on '"Halbritter, Aud H'
Search Results
2. Plant trait and vegetation data along a 1314 m elevation gradient with fire history in Puna grasslands, Perú
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Halbritter, Aud H., Vandvik, Vigdis, Cotner, Sehoya H., Farfan-Rios, William, Maitner, Brian S., Michaletz, Sean T., Oliveras Menor, Imma, Telford, Richard J., Ccahuana, Adam, Cruz, Rudi, Sallo-Bravo, Jhonatan, Santos-Andrade, Paul Efren, Vilca-Bustamante, Lucely L., Castorena, Matiss, Chacón-Labella, Julia, Christiansen, Casper Tai, Duran, Sandra M., Egelkraut, Dagmar D., Gya, Ragnhild, Haugum, Siri Vatsø, Seltzer, Lorah, Silman, Miles R., Strydom, Tanya, Spiegel, Marcus P., Barros, Agustina, Birkeli, Kristine, Boakye, Mickey, Chiappero, Fernanda, Chmurzynski, Adam, Garen, Josef C., Gaudard, Joseph, Gauthier, Tasha-Leigh J., Geange, Sonya R., Gonzales, Fiorella N., Henn, Jonathan J., Hošková, Kristýna, Isaksen, Anders, Jessup, Laura H., Johnson, Will, Kusch, Erik, Lepley, Kai, Lift, Mackenzie, Martyn, Trace E., Muñoz Mazon, Miguel, Middleton, Sara L., Quinteros Casaverde, Natalia L., Navarro, Jocelyn, Zepeda, Verónica, Ocampo-Zuleta, Korina, Palomino-Cardenas, Andrea Carmeli, Pastor Ploskonka, Samuel, Pierfederici, Maria Elisa, Pinelli, Verónica, Rickenback, Jess, Roos, Ruben E., Rui, Hilde Stokland, Sanchez Diaz, Eugenia, Sánchez-Tapia, Andrea, Smith, Alyssa, Urquiaga-Flores, Erickson, von Oppen, Jonathan, and Enquist, Brian J.
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- 2024
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3. Plant trait and vegetation data along a 1314 m elevation gradient with fire history in Puna grasslands, Perú
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Aud H. Halbritter, Vigdis Vandvik, Sehoya H. Cotner, William Farfan-Rios, Brian S. Maitner, Sean T. Michaletz, Imma Oliveras Menor, Richard J. Telford, Adam Ccahuana, Rudi Cruz, Jhonatan Sallo-Bravo, Paul Efren Santos-Andrade, Lucely L. Vilca-Bustamante, Matiss Castorena, Julia Chacón-Labella, Casper Tai Christiansen, Sandra M. Duran, Dagmar D. Egelkraut, Ragnhild Gya, Siri Vatsø Haugum, Lorah Seltzer, Miles R. Silman, Tanya Strydom, Marcus P. Spiegel, Agustina Barros, Kristine Birkeli, Mickey Boakye, Fernanda Chiappero, Adam Chmurzynski, Josef C. Garen, Joseph Gaudard, Tasha-Leigh J. Gauthier, Sonya R. Geange, Fiorella N. Gonzales, Jonathan J. Henn, Kristýna Hošková, Anders Isaksen, Laura H. Jessup, Will Johnson, Erik Kusch, Kai Lepley, Mackenzie Lift, Trace E. Martyn, Miguel Muñoz Mazon, Sara L. Middleton, Natalia L. Quinteros Casaverde, Jocelyn Navarro, Verónica Zepeda, Korina Ocampo-Zuleta, Andrea Carmeli Palomino-Cardenas, Samuel Pastor Ploskonka, Maria Elisa Pierfederici, Verónica Pinelli, Jess Rickenback, Ruben E. Roos, Hilde Stokland Rui, Eugenia Sanchez Diaz, Andrea Sánchez-Tapia, Alyssa Smith, Erickson Urquiaga-Flores, Jonathan von Oppen, and Brian J. Enquist
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Science - Abstract
Abstract Alpine grassland vegetation supports globally important biodiversity and ecosystems that are increasingly threatened by climate warming and other environmental changes. Trait-based approaches can support understanding of vegetation responses to global change drivers and consequences for ecosystem functioning. In six sites along a 1314 m elevational gradient in Puna grasslands in the Peruvian Andes, we collected datasets on vascular plant composition, plant functional traits, biomass, ecosystem fluxes, and climate data over three years. The data were collected in the wet and dry season and from plots with different fire histories. We selected traits associated with plant resource use, growth, and life history strategies (leaf area, leaf dry/wet mass, leaf thickness, specific leaf area, leaf dry matter content, leaf C, N, P content, C and N isotopes). The trait dataset contains 3,665 plant records from 145 taxa, 54,036 trait measurements (increasing the trait data coverage of the regional flora by 420%) covering 14 traits and 121 plant taxa (ca. 40% of which have no previous publicly available trait data) across 33 families.
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- 2024
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4. Plant traits and associated data from a warming experiment, a seabird colony, and along elevation in Svalbard
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Vandvik, Vigdis, Halbritter, Aud H., Althuizen, Inge H. J., Christiansen, Casper T., Henn, Jonathan J., Jónsdóttir, Ingibjörg Svala, Klanderud, Kari, Macias-Fauria, Marc, Malhi, Yadvinder, Maitner, Brian Salvin, Michaletz, Sean, Roos, Ruben E., Telford, Richard J., Bass, Polly, Björnsdóttir, Katrín, Bustamante, Lucely Lucero Vilca, Chmurzynski, Adam, Chen, Shuli, Haugum, Siri Vatsø, Kemppinen, Julia, Lepley, Kai, Li, Yaoqi, Linabury, Mary, Matos, Ilaíne Silveira, Neto-Bradley, Barbara M., Ng, Molly, Niittynen, Pekka, Östman, Silje, Pánková, Karolína, Roth, Nina, Castorena, Matiss, Spiegel, Marcus, Thomson, Eleanor, Vågenes, Alexander Sæle, and Enquist, Brian J.
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- 2023
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5. Bootstrapping outperforms community‐weighted approaches for estimating the shapes of phenotypic distributions
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Brian S. Maitner, Aud H. Halbritter, Richard J. Telford, Tanya Strydom, Julia Chacon, Christine Lamanna, Lindsey L. Sloat, Andrew J. Kerkhoff, Julie Messier, Nick Rasmussen, Francesco Pomati, Ewa Merz, Vigdis Vandvik, and Brian J. Enquist
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body size ,community ecology ,community‐weighted mean ,functional ecology ,functional traits ,nonparametric bootstrapping ,Ecology ,QH540-549.5 ,Evolution ,QH359-425 - Abstract
Abstract Estimating phenotypic distributions of populations and communities is central to many questions in ecology and evolution. These distributions can be characterized by their moments (mean, variance, skewness and kurtosis) or diversity metrics (e.g. functional richness). Typically, such moments and metrics are calculated using community‐weighted approaches (e.g. abundance‐weighted mean). We propose an alternative bootstrapping approach that allows flexibility in trait sampling and explicit incorporation of intraspecific variation, and show that this approach significantly improves estimation while allowing us to quantify uncertainty. We assess the performance of different approaches for estimating the moments of trait distributions across various sampling scenarios, taxa and datasets by comparing estimates derived from simulated samples with the true values calculated from full datasets. Simulations differ in sampling intensity (individuals per species), sampling biases (abundance, size), trait data source (local vs. global) and estimation method (two types of community‐weighting, two types of bootstrapping). We introduce the traitstrap R package, which contains a modular and extensible set of bootstrapping and weighted‐averaging functions that use community composition and trait data to estimate the moments of community trait distributions with their uncertainty. Importantly, the first function in the workflow, trait_fill, allows the user to specify hierarchical structures (e.g. plot within site, experiment vs. control, species within genus) to assign trait values to each taxon in each community sample. Across all taxa, simulations and metrics, bootstrapping approaches were more accurate and less biased than community‐weighted approaches. With bootstrapping, a sample size of 9 or more measurements per species per trait generally included the true mean within the 95% CI. It reduced average percent errors by 26%–74% relative to community‐weighting. Random sampling across all species outperformed both size‐ and abundance‐biased sampling. Our results suggest randomly sampling ~9 individuals per sampling unit and species, covering all species in the community and analysing the data using nonparametric bootstrapping generally enable reliable inference on trait distributions, including the central moments, of communities. By providing better estimates of community trait distributions, bootstrapping approaches can improve our ability to link traits to both the processes that generate them and their effects on ecosystems.
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- 2023
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6. Plant traits and associated data from a warming experiment, a seabird colony, and along elevation in Svalbard
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Vigdis Vandvik, Aud H. Halbritter, Inge H. J. Althuizen, Casper T. Christiansen, Jonathan J. Henn, Ingibjörg Svala Jónsdóttir, Kari Klanderud, Marc Macias-Fauria, Yadvinder Malhi, Brian Salvin Maitner, Sean Michaletz, Ruben E. Roos, Richard J. Telford, Polly Bass, Katrín Björnsdóttir, Lucely Lucero Vilca Bustamante, Adam Chmurzynski, Shuli Chen, Siri Vatsø Haugum, Julia Kemppinen, Kai Lepley, Yaoqi Li, Mary Linabury, Ilaíne Silveira Matos, Barbara M. Neto-Bradley, Molly Ng, Pekka Niittynen, Silje Östman, Karolína Pánková, Nina Roth, Matiss Castorena, Marcus Spiegel, Eleanor Thomson, Alexander Sæle Vågenes, and Brian J. Enquist
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Science - Abstract
Abstract The Arctic is warming at a rate four times the global average, while also being exposed to other global environmental changes, resulting in widespread vegetation and ecosystem change. Integrating functional trait-based approaches with multi-level vegetation, ecosystem, and landscape data enables a holistic understanding of the drivers and consequences of these changes. In two High Arctic study systems near Longyearbyen, Svalbard, a 20-year ITEX warming experiment and elevational gradients with and without nutrient input from nesting seabirds, we collected data on vegetation composition and structure, plant functional traits, ecosystem fluxes, multispectral remote sensing, and microclimate. The dataset contains 1,962 plant records and 16,160 trait measurements from 34 vascular plant taxa, for 9 of which these are the first published trait data. By integrating these comprehensive data, we bridge knowledge gaps and expand trait data coverage, including on intraspecific trait variation. These data can offer insights into ecosystem functioning and provide baselines to assess climate and environmental change impacts. Such knowledge is crucial for effective conservation and management in these vulnerable regions.
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- 2023
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7. Three decades of environmental change studies at alpine Finse, Norway: climate trends and responses across ecological scales
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Ruben E. Roos, Johan Asplund, Tone Birkemoe, Aud H. Halbritter, Siri Lie Olsen, Linn Vassvik, Kristel van Zuijlen, and Kari Klanderud
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alpine ecosystems ,climate change ,experimental manipulation ,International Tundra Experiment ,open top chamber ,within-site synthesis ,Environmental sciences ,GE1-350 ,Environmental engineering ,TA170-171 - Abstract
The International Tundra Experiment (ITEX) was established to understand how environmental change impacts Arctic and alpine ecosystems. The success of the ITEX network has allowed for several important across-site syntheses, and for some ITEX sites enough data have now been collected to perform within-site syntheses on the effects of environmental change across ecological scales. In this study, we analyze climate data and synthesize three decades of research on the ecological effects of environmental change at the ITEX site at Finse, southern Norway. We found a modest warming rate of +0.36 °C per decade and minor effects on growing season length. Maximum winter snow depth was highest in winters with a positive North Atlantic Oscillation. Our synthesis included 80 ecological studies from Finse, biased towards primary producers with few studies on ecological processes. Species distributions depended on microtopography and microclimate. Experimental warming had contrasting effects on abundance and traits of individual species and only modest effects at the community level above and below ground. In contrast, nutrient addition experiments caused strong responses in primary producer and arthropod communities. This within-site synthesis enabled us to conclude how different environmental changes (experimental and ambient warming, nutrient addition, and environmental gradients) impact across ecological scales, which is challenging to achieve with across-site approaches.
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- 2023
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8. A reporting format for leaf-level gas exchange data and metadata
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Ely, Kim S, Rogers, Alistair, Agarwal, Deborah A, Ainsworth, Elizabeth A, Albert, Loren P, Ali, Ashehad, Anderson, Jeremiah, Aspinwall, Michael J, Bellasio, Chandra, Bernacchi, Carl, Bonnage, Steve, Buckley, Thomas N, Bunce, James, Burnett, Angela C, Busch, Florian A, Cavanagh, Amanda, Cernusak, Lucas A, Crystal-Ornelas, Robert, Damerow, Joan, Davidson, Kenneth J, De Kauwe, Martin G, Dietze, Michael C, Domingues, Tomas F, Dusenge, Mirindi Eric, Ellsworth, David S, Evans, John R, Gauthier, Paul PG, Gimenez, Bruno O, Gordon, Elizabeth P, Gough, Christopher M, Halbritter, Aud H, Hanson, David T, Heskel, Mary, Hogan, J Aaron, Hupp, Jason R, Jardine, Kolby, Kattge, Jens, Keenan, Trevor, Kromdijk, Johannes, Kumarathunge, Dushan P, Lamour, Julien, Leakey, Andrew DB, LeBauer, David S, Li, Qianyu, Lundgren, Marjorie R, McDowell, Nate, Meacham-Hensold, Katherine, Medlyn, Belinda E, Moore, David JP, Negrón-Juárez, Robinson, Niinemets, Ülo, Osborne, Colin P, Pivovaroff, Alexandria L, Poorter, Hendrik, Reed, Sasha C, Ryu, Youngryel, Sanz-Saez, Alvaro, Schmiege, Stephanie C, Serbin, Shawn P, Sharkey, Thomas D, Slot, Martijn, Smith, Nicholas G, Sonawane, Balasaheb V, South, Paul F, Souza, Daisy C, Stinziano, Joseph Ronald, Stuart-Haëntjens, Ellen, Taylor, Samuel H, Tejera, Mauricio D, Uddling, Johan, Vandvik, Vigdis, Varadharajan, Charuleka, Walker, Anthony P, Walker, Berkley J, Warren, Jeffrey M, Way, Danielle A, Wolfe, Brett T, Wu, Jin, Wullschleger, Stan D, Xu, Chonggang, Yan, Zhengbing, and Yang, Dedi
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Biological Sciences ,Ecology ,Data Science ,Photosynthesis ,Carbon dioxide ,Irradiance ,Data reporting format ,Metadata ,Data standard ,Information and Computing Sciences ,Biological sciences ,Information and computing sciences - Abstract
Leaf-level gas exchange data support the mechanistic understanding of plant fluxes of carbon and water. These fluxes inform our understanding of ecosystem function, are an important constraint on parameterization of terrestrial biosphere models, are necessary to understand the response of plants to global environmental change, and are integral to efforts to improve crop production. Collection of these data using gas analyzers can be both technically challenging and time consuming, and individual studies generally focus on a small range of species, restricted time periods, or limited geographic regions. The high value of these data is exemplified by the many publications that reuse and synthesize gas exchange data, however the lack of metadata and data reporting conventions make full and efficient use of these data difficult. Here we propose a reporting format for leaf-level gas exchange data and metadata to provide guidance to data contributors on how to store data in repositories to maximize their discoverability, facilitate their efficient reuse, and add value to individual datasets. For data users, the reporting format will better allow data repositories to optimize data search and extraction, and more readily integrate similar data into harmonized synthesis products. The reporting format specifies data table variable naming and unit conventions, as well as metadata characterizing experimental conditions and protocols. For common data types that were the focus of this initial version of the reporting format, i.e., survey measurements, dark respiration, carbon dioxide and light response curves, and parameters derived from those measurements, we took a further step of defining required additional data and metadata that would maximize the potential reuse of those data types. To aid data contributors and the development of data ingest tools by data repositories we provided a translation table comparing the outputs of common gas exchange instruments. Extensive consultation with data collectors, data users, instrument manufacturers, and data scientists was undertaken in order to ensure that the reporting format met community needs. The reporting format presented here is intended to form a foundation for future development that will incorporate additional data types and variables as gas exchange systems and measurement approaches advance in the future. The reporting format is published in the U.S. Department of Energy's ESS-DIVE data repository, with documentation and future development efforts being maintained in a version control system.
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- 2021
9. SoilTemp: A global database of near‐surface temperature
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Lembrechts, Jonas J, Aalto, Juha, Ashcroft, Michael B, De Frenne, Pieter, Kopecký, Martin, Lenoir, Jonathan, Luoto, Miska, Maclean, Ilya MD, Roupsard, Olivier, Fuentes‐Lillo, Eduardo, García, Rafael A, Pellissier, Loïc, Pitteloud, Camille, Alatalo, Juha M, Smith, Stuart W, Björk, Robert G, Muffler, Lena, Backes, Amanda Ratier, Cesarz, Simone, Gottschall, Felix, Okello, Joseph, Urban, Josef, Plichta, Roman, Svátek, Martin, Phartyal, Shyam S, Wipf, Sonja, Eisenhauer, Nico, Pușcaș, Mihai, Turtureanu, Pavel D, Varlagin, Andrej, Dimarco, Romina D, Jump, Alistair S, Randall, Krystal, Dorrepaal, Ellen, Larson, Keith, Walz, Josefine, Vitale, Luca, Svoboda, Miroslav, Higgens, Rebecca Finger, Halbritter, Aud H, Curasi, Salvatore R, Klupar, Ian, Koontz, Austin, Pearse, William D, Simpson, Elizabeth, Stemkovski, Michael, Graae, Bente Jessen, Sørensen, Mia Vedel, Høye, Toke T, Calzado, M Rosa Fernández, Lorite, Juan, Carbognani, Michele, Tomaselli, Marcello, Forte, T'ai GW, Petraglia, Alessandro, Haesen, Stef, Somers, Ben, Van Meerbeek, Koenraad, Björkman, Mats P, Hylander, Kristoffer, Merinero, Sonia, Gharun, Mana, Buchmann, Nina, Dolezal, Jiri, Matula, Radim, Thomas, Andrew D, Bailey, Joseph J, Ghosn, Dany, Kazakis, George, Pablo, Miguel A, Kemppinen, Julia, Niittynen, Pekka, Rew, Lisa, Seipel, Tim, Larson, Christian, Speed, James DM, Ardö, Jonas, Cannone, Nicoletta, Guglielmin, Mauro, Malfasi, Francesco, Bader, Maaike Y, Canessa, Rafaella, Stanisci, Angela, Kreyling, Juergen, Schmeddes, Jonas, Teuber, Laurenz, Aschero, Valeria, Čiliak, Marek, Máliš, František, De Smedt, Pallieter, Govaert, Sanne, Meeussen, Camille, Vangansbeke, Pieter, Gigauri, Khatuna, Lamprecht, Andrea, Pauli, Harald, Steinbauer, Klaus, Winkler, Manuela, Ueyama, Masahito, and Nuñez, Martin A
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Climate Action ,Climate Change ,Ecosystem ,Microclimate ,Snow ,Temperature ,climate change ,database ,ecosystem processes ,microclimate ,soil climate ,species distributions ,temperature ,topoclimate ,Environmental Sciences ,Biological Sciences ,Ecology - Abstract
Current analyses and predictions of spatially explicit patterns and processes in ecology most often rely on climate data interpolated from standardized weather stations. This interpolated climate data represents long-term average thermal conditions at coarse spatial resolutions only. Hence, many climate-forcing factors that operate at fine spatiotemporal resolutions are overlooked. This is particularly important in relation to effects of observation height (e.g. vegetation, snow and soil characteristics) and in habitats varying in their exposure to radiation, moisture and wind (e.g. topography, radiative forcing or cold-air pooling). Since organisms living close to the ground relate more strongly to these microclimatic conditions than to free-air temperatures, microclimatic ground and near-surface data are needed to provide realistic forecasts of the fate of such organisms under anthropogenic climate change, as well as of the functioning of the ecosystems they live in. To fill this critical gap, we highlight a call for temperature time series submissions to SoilTemp, a geospatial database initiative compiling soil and near-surface temperature data from all over the world. Currently, this database contains time series from 7,538 temperature sensors from 51 countries across all key biomes. The database will pave the way toward an improved global understanding of microclimate and bridge the gap between the available climate data and the climate at fine spatiotemporal resolutions relevant to most organisms and ecosystem processes.
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- 2020
10. Publisher Correction: Open Science principles for accelerating trait-based science across the Tree of Life
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Gallagher, Rachael V, Falster, Daniel S, Maitner, Brian S, Salguero-Gómez, Roberto, Vandvik, Vigdis, Pearse, William D, Schneider, Florian D, Kattge, Jens, Poelen, Jorrit H, Madin, Joshua S, Ankenbrand, Markus J, Penone, Caterina, Feng, Xiao, Adams, Vanessa M, Alroy, John, Andrew, Samuel C, Balk, Meghan A, Bland, Lucie M, Boyle, Brad L, Bravo-Avila, Catherine H, Brennan, Ian, Carthey, Alexandra JR, Catullo, Renee, Cavazos, Brittany R, Conde, Dalia A, Chown, Steven L, Fadrique, Belen, Gibb, Heloise, Halbritter, Aud H, Hammock, Jennifer, Hogan, J Aaron, Holewa, Hamish, Hope, Michael, Iversen, Colleen M, Jochum, Malte, Kearney, Michael, Keller, Alexander, Mabee, Paula, Manning, Peter, McCormack, Luke, Michaletz, Sean T, Park, Daniel S, Perez, Timothy M, Pineda-Munoz, Silvia, Ray, Courtenay A, Rossetto, Maurizio, Sauquet, Hervé, Sparrow, Benjamin, Spasojevic, Marko J, Telford, Richard J, Tobias, Joseph A, Violle, Cyrille, Walls, Ramona, Weiss, Katherine CB, Westoby, Mark, Wright, Ian J, and Enquist, Brian J
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Biological Sciences ,Environmental Management ,Ecology ,Evolutionary Biology ,Environmental Sciences ,Evolutionary biology ,Environmental management - Abstract
An amendment to this paper has been published and can be accessed via a link at the top of the paper.
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- 2020
11. Open Science principles for accelerating trait-based science across the Tree of Life
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Gallagher, Rachael V, Falster, Daniel S, Maitner, Brian S, Salguero-Gómez, Roberto, Vandvik, Vigdis, Pearse, William D, Schneider, Florian D, Kattge, Jens, Poelen, Jorrit H, Madin, Joshua S, Ankenbrand, Markus J, Penone, Caterina, Feng, Xiao, Adams, Vanessa M, Alroy, John, Andrew, Samuel C, Balk, Meghan A, Bland, Lucie M, Boyle, Brad L, Bravo-Avila, Catherine H, Brennan, Ian, Carthey, Alexandra JR, Catullo, Renee, Cavazos, Brittany R, Conde, Dalia A, Chown, Steven L, Fadrique, Belen, Gibb, Heloise, Halbritter, Aud H, Hammock, Jennifer, Hogan, J Aaron, Holewa, Hamish, Hope, Michael, Iversen, Colleen M, Jochum, Malte, Kearney, Michael, Keller, Alexander, Mabee, Paula, Manning, Peter, McCormack, Luke, Michaletz, Sean T, Park, Daniel S, Perez, Timothy M, Pineda-Munoz, Silvia, Ray, Courtenay A, Rossetto, Maurizio, Sauquet, Hervé, Sparrow, Benjamin, Spasojevic, Marko J, Telford, Richard J, Tobias, Joseph A, Violle, Cyrille, Walls, Ramona, Weiss, Katherine CB, Westoby, Mark, Wright, Ian J, and Enquist, Brian J
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Climate Change Impacts and Adaptation ,Biological Sciences ,Environmental Sciences ,Networking and Information Technology R&D (NITRD) ,Generic health relevance ,Biodiversity ,Biological Evolution ,Ecology ,Phenotype ,Research ,Evolutionary biology ,Environmental management - Abstract
Synthesizing trait observations and knowledge across the Tree of Life remains a grand challenge for biodiversity science. Species traits are widely used in ecological and evolutionary science, and new data and methods have proliferated rapidly. Yet accessing and integrating disparate data sources remains a considerable challenge, slowing progress toward a global synthesis to integrate trait data across organisms. Trait science needs a vision for achieving global integration across all organisms. Here, we outline how the adoption of key Open Science principles-open data, open source and open methods-is transforming trait science, increasing transparency, democratizing access and accelerating global synthesis. To enhance widespread adoption of these principles, we introduce the Open Traits Network (OTN), a global, decentralized community welcoming all researchers and institutions pursuing the collaborative goal of standardizing and integrating trait data across organisms. We demonstrate how adherence to Open Science principles is key to the OTN community and outline five activities that can accelerate the synthesis of trait data across the Tree of Life, thereby facilitating rapid advances to address scientific inquiries and environmental issues. Lessons learned along the path to a global synthesis of trait data will provide a framework for addressing similarly complex data science and informatics challenges.
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- 2020
12. The role of plant functional groups mediating climate impacts on carbon and biodiversity of alpine grasslands
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Vigdis Vandvik, Inge H. J. Althuizen, Francesca Jaroszynska, Linn C. Krüger, Hanna Lee, Deborah E. Goldberg, Kari Klanderud, Siri L. Olsen, Richard J. Telford, Silje A. H. Östman, Sara Busca, Ingrid J. Dahle, Dagmar D. Egelkraut, Sonya R. Geange, Ragnhild Gya, Josh S. Lynn, Eric Meineri, Sherry Young, and Aud H. Halbritter
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Science - Abstract
Measurement(s) vegetation layer • ecosystem-wide respiration • ecosystem-wide photosynthesis • seedling development stage • temperature of soil • plant functional group biomass • volumetric soil moisture • reflectance spectrum Technology Type(s) Visual species identification and cover estimation • Licor gas analyzer • Visual species identification and estimation • ibutton temperature logger • Analytical Balance • SM300 soil mositure probe, Delta-T • GreenSeeker/Normalized Difference Vegetation Index measurements Factor Type(s) temperature • precipitation • Plant functional type composition Sample Characteristic - Organism Embryophyta Sample Characteristic - Environment alpine tundra biome Sample Characteristic - Location Vestlandet Region
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- 2022
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13. The role of plant functional groups mediating climate impacts on carbon and biodiversity of alpine grasslands
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Vandvik, Vigdis, Althuizen, Inge H. J., Jaroszynska, Francesca, Krüger, Linn C., Lee, Hanna, Goldberg, Deborah E., Klanderud, Kari, Olsen, Siri L., Telford, Richard J., Östman, Silje A. H., Busca, Sara, Dahle, Ingrid J., Egelkraut, Dagmar D., Geange, Sonya R., Gya, Ragnhild, Lynn, Josh S., Meineri, Eric, Young, Sherry, and Halbritter, Aud H.
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- 2022
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14. Biotic rescaling reveals importance of species interactions for variation in biodiversity responses to climate change
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Vandvik, Vigdis, Skarpaas, Olav, Klanderud, Kari, Telford, Richard J., Halbritter, Aud H., and Goldberg, Deborah E.
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- 2020
15. Adding Value to a Field-Based Course with a Science Communication Module on Local Perceptions of Climate Change
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Patrick, Lorelei, Thompson, Seth, Halbritter, Aud H., Enquist, Brian J., Vandvik, Vigdis, and Cotner, Sehoya
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- 2020
16. Next‐generation field courses: Integrating Open Science and online learning
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Sonya R. Geange, Jonathan vonOppen, Tanya Strydom, Mickey Boakye, Tasha‐Leigh J. Gauthier, Ragnhild Gya, Aud H. Halbritter, Laura H. Jessup, Sara L. Middleton, Jocelyn Navarro, Maria Elisa Pierfederici, Julia Chacón‐Labella, Sehoya Cotner, William Farfan‐Rios, Brian S. Maitner, Sean T. Michaletz, Richard J. Telford, Brian J. Enquist, and Vigdis Vandvik
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career development ,early career researchers ,FAIR principles ,higher education ,pedagogy ,reproducible research ,Ecology ,QH540-549.5 - Abstract
Abstract As Open Science practices become more commonplace, there is a need for the next generation of scientists to be well versed in these aspects of scientific research. Yet, many training opportunities for early career researchers (ECRs) could better emphasize or integrate Open Science elements. Field courses provide opportunities for ECRs to apply theoretical knowledge, practice new methodological approaches, and gain an appreciation for the challenges of real‐life research, and could provide an excellent platform for integrating training in Open Science practices. Our recent experience, as primarily ECRs engaged in a field course interrupted by COVID‐19, led us to reflect on the potential to enhance learning outcomes in field courses by integrating Open Science practices and online learning components. Specifically, we highlight the opportunity for field courses to align teaching activities with the recent developments and trends in how we conduct research, including training in: publishing registered reports, collecting data using standardized methods, adopting high‐quality data documentation, managing data through reproducible workflows, and sharing and publishing data through appropriate channels. We also discuss how field courses can use online tools to optimize time in the field, develop open access resources, and cultivate collaborations. By integrating these elements, we suggest that the next generation of field courses will offer excellent arenas for participants to adopt Open Science practices.
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- 2021
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17. From a crisis to an opportunity: Eight insights for doing science in the COVID‐19 era and beyond
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Julia Chacón‐Labella, Mickey Boakye, Brian J. Enquist, William Farfan‐Rios, Ragnhild Gya, Aud H. Halbritter, Sara L. Middleton, Jonathan vonOppen, Samuel Pastor‐Ploskonka, Tanya Strydom, Vigdis Vandvik, and Sonya R. Geange
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data sharing ,early career ,inclusivity ,networking ,online collaboration ,skill development ,Ecology ,QH540-549.5 - Abstract
Abstract The COVID‐19 crisis has forced researchers in Ecology to change the way we work almost overnight. Nonetheless, the pandemic has provided us with several novel components for a new way of conducting science. In this perspective piece, we summarize eight central insights that are helping us, as early career researchers, navigate the uncertainties, fears, and challenges of advancing science during the COVID‐19 pandemic. We highlight how innovative, collaborative, and often Open Science‐driven developments that have arisen from this crisis can form a blueprint for a community reinvention in academia. Our insights include personal approaches to managing our new reality, maintaining capacity to focus and resilience in our projects, and a variety of tools that facilitate remote collaboration. We also highlight how, at a community level, we can take advantage of online communication platforms for gaining accessibility to conferences and meetings, and for maintaining research networks and community engagement while promoting a more diverse and inclusive community. Overall, we are confident that these practices can support a more inclusive and kinder scientific culture for the longer term.
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- 2021
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18. Consistent trait–environment relationships within and across tundra plant communities
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Kemppinen, Julia, Niittynen, Pekka, le Roux, Peter C., Momberg, Mia, Happonen, Konsta, Aalto, Juha, Rautakoski, Helena, Enquist, Brian J., Vandvik, Vigdis, Halbritter, Aud H., Maitner, Brian, and Luoto, Miska
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- 2021
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19. Close to open-Factors that hinder and promote open science in ecology research and education.
- Author
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Christian B Strømme, A Kelly Lane, Aud H Halbritter, Elizabeth Law, Chloe R Nater, Erlend B Nilsen, Grace D Boutouli, Dagmar D Egelkraut, Richard J Telford, Vigdis Vandvik, and Sehoya H Cotner
- Subjects
Medicine ,Science - Abstract
The Open Science (OS) movement is rapidly gaining traction among policy-makers, research funders, scientific journals and individual scientists. Despite these tendencies, the pace of implementing OS throughout the scientific process and across the scientific community remains slow. Thus, a better understanding of the conditions that affect OS engagement, and in particular, of how practitioners learn, use, conduct and share research openly can guide those seeking to implement OS more broadly. We surveyed participants at an OS workshop hosted by the Living Norway Ecological Data Network in 2020 to learn how they perceived OS and its importance in their research, supervision and teaching. Further, we wanted to know what OS practices they had encountered in their education and what they saw as hindering or helping their engagement with OS. The survey contained scaled-response and open-ended questions, allowing for a mixed-methods approach. We obtained survey responses from 60 out of 128 workshop participants (47%). Responses indicated that usage and sharing of open data and code, as well as open access publication, were the most frequent OS practices. Only a minority of respondents reported having encountered OS in their formal education. A majority also viewed OS as less important in their teaching than in their research and supervisory roles. The respondents' suggestions for what would facilitate greater OS engagement in the future included knowledge, guidelines, and resources, but also social and structural support. These are aspects that could be strengthened by promoting explicit implementation of OS practices in higher education and by nurturing a more inclusive and equitable OS culture. We argue that incorporating OS in teaching and learning of science can yield substantial benefits to the research community, student learning, and ultimately, to the wider societal objectives of science and higher education.
- Published
- 2022
- Full Text
- View/download PDF
20. Plant traits and vegetation data from climate warming experiments along an 1100 m elevation gradient in Gongga Mountains, China
- Author
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Vandvik, Vigdis, Halbritter, Aud H., Yang, Yan, He, Hai, Zhang, Li, Brummer, Alexander B., Klanderud, Kari, Maitner, Brian S., Michaletz, Sean T., Sun, Xiangyang, Telford, Richard J., Wang, Genxu, Althuizen, Inge H. J., Henn, Jonathan J., Garcia, William Fernando Erazo, Gya, Ragnhild, Jaroszynska, Francesca, Joyce, Blake L., Lehman, Rebecca, Moerland, Michelangelo Sergio, Nesheim-Hauge, Elisabeth, Nordås, Linda Hovde, Peng, Ahui, Ponsac, Claire, Seltzer, Lorah, Steyn, Christien, Sullivan, Megan K., Tjendra, Jesslyn, Xiao, Yao, Zhao, Xiaoxiang, and Enquist, Brian J.
- Published
- 2020
- Full Text
- View/download PDF
21. Multiscale mapping of plant functional groups and plant traits in the High Arctic using field spectroscopy, UAV imagery and Sentinel-2A data
- Author
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Eleanor R Thomson, Marcus P Spiegel, Inge H J Althuizen, Polly Bass, Shuli Chen, Adam Chmurzynski, Aud H Halbritter, Jonathan J Henn, Ingibjörg S Jónsdóttir, Kari Klanderud, Yaoqi Li, Brian S Maitner, Sean T Michaletz, Pekka Niittynen, Ruben E Roos, Richard J Telford, Brian J Enquist, Vigdis Vandvik, Marc Macias-Fauria, and Yadvinder Malhi
- Subjects
Svalbard ,functional trait ,tundra ,moss ,shrubs ,remote sensing ,Environmental technology. Sanitary engineering ,TD1-1066 ,Environmental sciences ,GE1-350 ,Science ,Physics ,QC1-999 - Abstract
The Arctic is warming twice as fast as the rest of the planet, leading to rapid changes in species composition and plant functional trait variation. Landscape-level maps of vegetation composition and trait distributions are required to expand spatially-limited plot studies, overcome sampling biases associated with the most accessible research areas, and create baselines from which to monitor environmental change. Unmanned aerial vehicles (UAVs) have emerged as a low-cost method to generate high-resolution imagery and bridge the gap between fine-scale field studies and lower resolution satellite analyses. Here we used field spectroscopy data (400–2500 nm) and UAV multispectral imagery to test spectral methods of species identification and plant water and chemistry retrieval near Longyearbyen, Svalbard. Using the field spectroscopy data and Random Forest analysis, we were able to distinguish eight common High Arctic plant tundra species with 74% accuracy. Using partial least squares regression (PLSR), we were able to predict corresponding water, nitrogen, phosphorus and C:N values ( r ^2 = 0.61–0.88, RMSEmean = 12%–64%). We developed analogous models using UAV imagery (five bands: Blue, Green, Red, Red Edge and Near-Infrared) and scaled up the results across a 450 m long nutrient gradient located underneath a seabird colony. At the UAV level, we were able to map three plant functional groups (mosses, graminoids and dwarf shrubs) at 72% accuracy and generate maps of plant chemistry. Our maps show a clear marine-derived fertility gradient, mediated by geomorphology. We used the UAV results to explore two methods of upscaling plant water content to the wider landscape using Sentinel-2A imagery. Our results are pertinent for high resolution, low-cost mapping of the Arctic.
- Published
- 2021
- Full Text
- View/download PDF
22. Bootstrapping outperforms community‐weighted approaches for estimating the shapes of phenotypic distributions.
- Author
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Maitner, Brian S., Halbritter, Aud H., Telford, Richard J., Strydom, Tanya, Chacon, Julia, Lamanna, Christine, Sloat, Lindsey L., Kerkhoff, Andrew J., Messier, Julie, Rasmussen, Nick, Pomati, Francesco, Merz, Ewa, Vandvik, Vigdis, and Enquist, Brian J.
- Subjects
PHENOTYPES ,BIOTIC communities ,STATISTICAL sampling ,SAMPLE size (Statistics) ,KURTOSIS - Abstract
Estimating phenotypic distributions of populations and communities is central to many questions in ecology and evolution. These distributions can be characterized by their moments (mean, variance, skewness and kurtosis) or diversity metrics (e.g. functional richness). Typically, such moments and metrics are calculated using community‐weighted approaches (e.g. abundance‐weighted mean). We propose an alternative bootstrapping approach that allows flexibility in trait sampling and explicit incorporation of intraspecific variation, and show that this approach significantly improves estimation while allowing us to quantify uncertainty.We assess the performance of different approaches for estimating the moments of trait distributions across various sampling scenarios, taxa and datasets by comparing estimates derived from simulated samples with the true values calculated from full datasets. Simulations differ in sampling intensity (individuals per species), sampling biases (abundance, size), trait data source (local vs. global) and estimation method (two types of community‐weighting, two types of bootstrapping).We introduce the traitstrap R package, which contains a modular and extensible set of bootstrapping and weighted‐averaging functions that use community composition and trait data to estimate the moments of community trait distributions with their uncertainty. Importantly, the first function in the workflow, trait_fill, allows the user to specify hierarchical structures (e.g. plot within site, experiment vs. control, species within genus) to assign trait values to each taxon in each community sample.Across all taxa, simulations and metrics, bootstrapping approaches were more accurate and less biased than community‐weighted approaches. With bootstrapping, a sample size of 9 or more measurements per species per trait generally included the true mean within the 95% CI. It reduced average percent errors by 26%–74% relative to community‐weighting. Random sampling across all species outperformed both size‐ and abundance‐biased sampling.Our results suggest randomly sampling ~9 individuals per sampling unit and species, covering all species in the community and analysing the data using nonparametric bootstrapping generally enable reliable inference on trait distributions, including the central moments, of communities. By providing better estimates of community trait distributions, bootstrapping approaches can improve our ability to link traits to both the processes that generate them and their effects on ecosystems. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
23. Intraspecific Trait Variation and Phenotypic Plasticity Mediate Alpine Plant Species Response to Climate Change
- Author
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Jonathan J. Henn, Vanessa Buzzard, Brian J. Enquist, Aud H. Halbritter, Kari Klanderud, Brian S. Maitner, Sean T. Michaletz, Christine Pötsch, Lorah Seltzer, Richard J. Telford, Yan Yang, Li Zhang, and Vigdis Vandvik
- Subjects
functional traits ,phenotypic plasticity ,alpine plants ,climate change ,intraspecific variation ,Plant culture ,SB1-1110 - Abstract
In a rapidly changing climate, alpine plants may persist by adapting to new conditions. However, the rate at which the climate is changing might exceed the rate of adaptation through evolutionary processes in long-lived plants. Persistence may depend on phenotypic plasticity in morphology and physiology. Here we investigated patterns of leaf trait variation including leaf area, leaf thickness, specific leaf area, leaf dry matter content, leaf nutrients (C, N, P) and isotopes (δ13C and δ15N) across an elevation gradient on Gongga Mountain, Sichuan Province, China. We quantified inter- and intra-specific trait variation and the plasticity in leaf traits of selected species to experimental warming and cooling by using a reciprocal transplantation approach. We found substantial phenotypic plasticity in most functional traits where δ15N, leaf area, and leaf P showed greatest plasticity. These traits did not correspond with traits with the largest amount of intraspecific variation. Plasticity in leaf functional traits tended to enable plant populations to shift their trait values toward the mean values of a transplanted plants’ destination community, but only if that population started with very different trait values. These results suggest that leaf trait plasticity is an important mechanism for enabling plants to persist within communities and to better tolerate changing environmental conditions under climate change.
- Published
- 2018
- Full Text
- View/download PDF
24. Transplants, Open Top Chambers (OTCs) and Gradient Studies Ask Different Questions in Climate Change Effects Studies
- Author
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Yan Yang, Aud H. Halbritter, Kari Klanderud, Richard J. Telford, Genxu Wang, and Vigdis Vandvik
- Subjects
alpine grasslands ,experimental warming ,integrated approaches ,space-for-time ,southwestern China ,Plant culture ,SB1-1110 - Abstract
Long-term monitoring, space-for-time substitutions along gradients, and in situ temperature manipulations are common approaches to understand effects of climate change on alpine and arctic plant communities. Although general patterns emerge from studies using different approaches, there are also some inconsistencies. To provide better estimates of plant community responses to future warming across a range of environments, there have been repeated calls for integrating different approaches within single studies. Thus, to examine how different methods in climate change effect studies may ask different questions, we combined three climate warming approaches in a single study in the Hengduan Mountains of southwestern China. We monitored plant communities along an elevation gradient using the space-for-time approach, and conducted warming experiments using open top chambers (OTCs) and plant community transplantation toward warmer climates along the same gradient. Plant species richness and abundances were monitored over 5 years addressing two questions: (1) how do plant communities respond to the different climate warming approaches? (2) how can the combined approaches improve predictions of plant community responses to climate change? The general trend across all three approaches was decreased species richness with climate warming at low elevations. This suggests increased competition from immigrating lowland species, and/or from the species already growing inside the plots, as indicated by increased biomass, vegetation height or proportion of graminoids. At the coldest sites, species richness decreased in OTCs and along the gradient, but increased in the transplants, suggesting that plant communities in colder climates are more open to invasion from lowland species, with slow species loss. This was only detected in the transplants, showing that different approaches, may yield different results. Whereas OTCs may constrain immigration of new species, transplanted communities are rapidly exposed to new neighbors that can easily colonize the small plots. Thus, different approaches ask slightly different questions, in particular regarding indirect climate change effects, such as biotic interactions. To better understand both direct and indirect effects of climate change on plant communities, we need to combine approaches in future studies, and if novel interactions are of particular interest, transplants may be a better approach than OTCs.
- Published
- 2018
- Full Text
- View/download PDF
25. How comparable are species distributions along elevational and latitudinal climate gradients?
- Author
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Halbritter, Aud H., Alexander, Jake M., Edwards, Peter J., and Billeter, Regula
- Published
- 2013
- Full Text
- View/download PDF
26. Testing assumptions of the enemy release hypothesis: generalist versus specialist enemies of the grass Brachypodium sylvaticum
- Author
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Halbritter, Aud H., Carroll, George C., Güsewell, Sabine, and Roy, Bitty A.
- Published
- 2012
27. Intraspecific trait variability is a key feature underlying high Arctic plant community resistance to climate warming.
- Author
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Jónsdóttir, Ingibjörg S., Halbritter, Aud H., Christiansen, Casper T., Althuizen, Inge H. J., Haugum, Siri V., Henn, Jonathan J., Björnsdóttir, Katrín, Maitner, Brian Salvin, Malhi, Yadvinder, Michaletz, Sean T., Roos, Ruben E., Klanderud, Kari, Lee, Hanna, Enquist, Brian J., and Vandvik, Vigdis
- Subjects
- *
GLOBAL warming , *PLANT communities , *COMMUNITIES , *ARCTIC climate , *PHENOTYPIC plasticity - Abstract
In the high Arctic, plant community species composition generally responds slowly to climate warming, whereas less is known about the community functional trait responses and consequences for ecosystem functioning. The slow species turnover and large distribution ranges of many Arctic plant species suggest a significant role of intraspecific trait variability in functional responses to climate change. Here we compare taxonomic and functional community compositional responses to a long‐term (17‐year) warming experiment in Svalbard, Norway, replicated across three major high Arctic habitats shaped by topography and contrasting snow regimes. We observed taxonomic compositional changes in all plant communities over time. Still, responses to experimental warming were minor and most pronounced in the drier habitats with relatively early snowmelt timing and long growing seasons (Cassiope and Dryas heaths). The habitats were clearly separated in functional trait space, defined by 12 size‐ and leaf economics‐related traits, primarily due to interspecific trait variation. Functional traits also responded to experimental warming, most prominently in the Dryas heath and mostly due to intraspecific trait variation. Leaf area and mass increased and leaf δ15N decreased in response to the warming treatment. Intraspecific trait variability ranged between 30% and 71% of the total trait variation, reflecting the functional resilience of those communities, dominated by long‐lived plants, due to either phenotypic plasticity or genotypic variation, which most likely underlies the observed resistance of high Arctic vegetation to climate warming. We further explored the consequences of trait variability for ecosystem functioning by measuring peak season CO2 fluxes. Together, environmental, taxonomic, and functional trait variables explained a large proportion of the variation in net ecosystem exchange (NEE), which increased when intraspecific trait variation was accounted for. In contrast, even though ecosystem respiration and gross ecosystem production both increased in response to warming across habitats, they were mainly driven by the direct kinetic impacts of temperature on plant physiology and biochemical processes. Our study shows that long‐term experimental warming has a modest but significant effect on plant community functional trait composition and suggests that intraspecific trait variability is a key feature underlying high Arctic ecosystem resistance to climate warming. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
28. Close to open—Factors that hinder and promote open science in ecology research and education.
- Author
-
Strømme, Christian B., Lane, A. Kelly, Halbritter, Aud H., Law, Elizabeth, Nater, Chloe R., Nilsen, Erlend B., Boutouli, Grace D., Egelkraut, Dagmar D., Telford, Richard J., Vandvik, Vigdis, and Cotner, Sehoya H.
- Subjects
ECOLOGY education ,OPEN access publishing ,SCIENTIFIC community ,SOCIAL support ,OPEN scholarship - Abstract
The Open Science (OS) movement is rapidly gaining traction among policy-makers, research funders, scientific journals and individual scientists. Despite these tendencies, the pace of implementing OS throughout the scientific process and across the scientific community remains slow. Thus, a better understanding of the conditions that affect OS engagement, and in particular, of how practitioners learn, use, conduct and share research openly can guide those seeking to implement OS more broadly. We surveyed participants at an OS workshop hosted by the Living Norway Ecological Data Network in 2020 to learn how they perceived OS and its importance in their research, supervision and teaching. Further, we wanted to know what OS practices they had encountered in their education and what they saw as hindering or helping their engagement with OS. The survey contained scaled-response and open-ended questions, allowing for a mixed-methods approach. We obtained survey responses from 60 out of 128 workshop participants (47%). Responses indicated that usage and sharing of open data and code, as well as open access publication, were the most frequent OS practices. Only a minority of respondents reported having encountered OS in their formal education. A majority also viewed OS as less important in their teaching than in their research and supervisory roles. The respondents' suggestions for what would facilitate greater OS engagement in the future included knowledge, guidelines, and resources, but also social and structural support. These are aspects that could be strengthened by promoting explicit implementation of OS practices in higher education and by nurturing a more inclusive and equitable OS culture. We argue that incorporating OS in teaching and learning of science can yield substantial benefits to the research community, student learning, and ultimately, to the wider societal objectives of science and higher education. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
29. Next‐generation field courses: Integrating Open Science and online learning.
- Author
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Geange, Sonya R., Oppen, Jonathan, Strydom, Tanya, Boakye, Mickey, Gauthier, Tasha‐Leigh J., Gya, Ragnhild, Halbritter, Aud H., Jessup, Laura H., Middleton, Sara L., Navarro, Jocelyn, Pierfederici, Maria Elisa, Chacón‐Labella, Julia, Cotner, Sehoya, Farfan‐Rios, William, Maitner, Brian S., Michaletz, Sean T., Telford, Richard J., Enquist, Brian J., and Vandvik, Vigdis
- Subjects
ONLINE education ,VOCATIONAL guidance ,ACTIVE learning ,COVID-19 ,ARENAS ,CAREER development - Abstract
As Open Science practices become more commonplace, there is a need for the next generation of scientists to be well versed in these aspects of scientific research. Yet, many training opportunities for early career researchers (ECRs) could better emphasize or integrate Open Science elements. Field courses provide opportunities for ECRs to apply theoretical knowledge, practice new methodological approaches, and gain an appreciation for the challenges of real‐life research, and could provide an excellent platform for integrating training in Open Science practices. Our recent experience, as primarily ECRs engaged in a field course interrupted by COVID‐19, led us to reflect on the potential to enhance learning outcomes in field courses by integrating Open Science practices and online learning components. Specifically, we highlight the opportunity for field courses to align teaching activities with the recent developments and trends in how we conduct research, including training in: publishing registered reports, collecting data using standardized methods, adopting high‐quality data documentation, managing data through reproducible workflows, and sharing and publishing data through appropriate channels. We also discuss how field courses can use online tools to optimize time in the field, develop open access resources, and cultivate collaborations. By integrating these elements, we suggest that the next generation of field courses will offer excellent arenas for participants to adopt Open Science practices. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
30. From a crisis to an opportunity: Eight insights for doing science in the COVID‐19 era and beyond.
- Author
-
Chacón‐Labella, Julia, Boakye, Mickey, Enquist, Brian J., Farfan‐Rios, William, Gya, Ragnhild, Halbritter, Aud H., Middleton, Sara L., Oppen, Jonathan, Pastor‐Ploskonka, Samuel, Strydom, Tanya, Vandvik, Vigdis, and Geange, Sonya R.
- Subjects
COVID-19 ,COVID-19 pandemic ,PANDEMICS ,CRISES ,SCIENTIFIC community - Abstract
The COVID‐19 crisis has forced researchers in Ecology to change the way we work almost overnight. Nonetheless, the pandemic has provided us with several novel components for a new way of conducting science. In this perspective piece, we summarize eight central insights that are helping us, as early career researchers, navigate the uncertainties, fears, and challenges of advancing science during the COVID‐19 pandemic. We highlight how innovative, collaborative, and often Open Science‐driven developments that have arisen from this crisis can form a blueprint for a community reinvention in academia. Our insights include personal approaches to managing our new reality, maintaining capacity to focus and resilience in our projects, and a variety of tools that facilitate remote collaboration. We also highlight how, at a community level, we can take advantage of online communication platforms for gaining accessibility to conferences and meetings, and for maintaining research networks and community engagement while promoting a more diverse and inclusive community. Overall, we are confident that these practices can support a more inclusive and kinder scientific culture for the longer term. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
31. The handbook for standardized field and laboratory measurements in terrestrial climate change experiments and observational studies (ClimEx).
- Author
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Halbritter, Aud H., De Boeck, Hans J., Eycott, Amy E., Reinsch, Sabine, Robinson, David A., Vicca, Sara, Berauer, Bernd, Christiansen, Casper T., Estiarte, Marc, Grünzweig, José M., Gya, Ragnhild, Hansen, Karin, Jentsch, Anke, Lee, Hanna, Linder, Sune, Marshall, John, Peñuelas, Josep, Kappel Schmidt, Inger, Stuart‐Haëntjens, Ellen, and Wilfahrt, Peter
- Subjects
CLIMATE change ,SCIENTIFIC community ,SCIENTIFIC observation ,RATE of return ,COOPERATIVE research ,ECONOMIES of scale - Abstract
Copyright of Methods in Ecology & Evolution is the property of Wiley-Blackwell and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2020
- Full Text
- View/download PDF
32. Intraspecific Trait Variation and Phenotypic Plasticity Mediate Alpine Plant Species Response to Climate Change.
- Author
-
Henn, Jonathan J., Buzzard, Vanessa, Enquist, Brian J., Halbritter, Aud H., Klanderud, Kari, Maitner, Brian S., Michaletz, Sean T., Pötsch, Christine, Seltzer, Lorah, Telford, Richard J., Yang, Yan, Zhang, Li, and Vandvik, Vigdis
- Subjects
MOUNTAIN plants ,PHENOTYPIC plasticity in plants ,VEGETATION & climate - Abstract
In a rapidly changing climate, alpine plants may persist by adapting to new conditions. However, the rate at which the climate is changing might exceed the rate of adaptation through evolutionary processes in long-lived plants. Persistence may depend on phenotypic plasticity in morphology and physiology. Here we investigated patterns of leaf trait variation including leaf area, leaf thickness, specific leaf area, leaf dry matter content, leaf nutrients (C, N, P) and isotopes (δ
13 C and δ15 N) across an elevation gradient on Gongga Mountain, Sichuan Province, China. We quantified inter- and intra-specific trait variation and the plasticity in leaf traits of selected species to experimental warming and cooling by using a reciprocal transplantation approach. We found substantial phenotypic plasticity in most functional traits where δ15 N, leaf area, and leaf P showed greatest plasticity. These traits did not correspond with traits with the largest amount of intraspecific variation. Plasticity in leaf functional traits tended to enable plant populations to shift their trait values toward the mean values of a transplanted plants' destination community, but only if that population started with very different trait values. These results suggest that leaf trait plasticity is an important mechanism for enabling plants to persist within communities and to better tolerate changing environmental conditions under climate change. [ABSTRACT FROM AUTHOR]- Published
- 2018
- Full Text
- View/download PDF
33. Transplants, Open Top Chambers (OTCs) and Gradient Studies Ask Different Questions in Climate Change Effects Studies.
- Author
-
Yang, Yan, Halbritter, Aud H., Klanderud, Kari, Telford, Richard J., Wang, Genxu, and Vandvik, Vigdis
- Subjects
MOUNTAIN plants ,VEGETATION & climate ,CLIMATE change - Abstract
Long-term monitoring, space-for-time substitutions along gradients, and in situ temperature manipulations are common approaches to understand effects of climate change on alpine and arctic plant communities. Although general patterns emerge from studies using different approaches, there are also some inconsistencies. To provide better estimates of plant community responses to future warming across a range of environments, there have been repeated calls for integrating different approaches within single studies. Thus, to examine how different methods in climate change effect studies may ask different questions, we combined three climate warming approaches in a single study in the Hengduan Mountains of southwestern China. We monitored plant communities along an elevation gradient using the space-for-time approach, and conducted warming experiments using open top chambers (OTCs) and plant community transplantation toward warmer climates along the same gradient. Plant species richness and abundances were monitored over 5 years addressing two questions: (1) how do plant communities respond to the different climate warming approaches? (2) how can the combined approaches improve predictions of plant community responses to climate change? The general trend across all three approaches was decreased species richness with climate warming at low elevations. This suggests increased competition from immigrating lowland species, and/or from the species already growing inside the plots, as indicated by increased biomass, vegetation height or proportion of graminoids. At the coldest sites, species richness decreased in OTCs and along the gradient, but increased in the transplants, suggesting that plant communities in colder climates are more open to invasion from lowland species, with slow species loss. This was only detected in the transplants, showing that different approaches, may yield different results. Whereas OTCs may constrain immigration of new species, transplanted communities are rapidly exposed to new neighbors that can easily colonize the small plots. Thus, different approaches ask slightly different questions, in particular regarding indirect climate change effects, such as biotic interactions. To better understand both direct and indirect effects of climate change on plant communities, we need to combine approaches in future studies, and if novel interactions are of particular interest, transplants may be a better approach than OTCs. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
34. Trait differentiation and adaptation of plants along elevation gradients.
- Author
-
Halbritter, Aud H., Fior, Simone, Keller, Irene, Billeter, Regula, Edwards, Peter J., Holderegger, Rolf, Karrenberg, Sophie, Pluess, Andrea R., Widmer, Alex, and Alexander, Jake M.
- Subjects
- *
PLANT population genetics , *PLANT adaptation , *PLANT reproduction , *PLANT physiology , *BIOMASS energy - Abstract
Abstract: Studies of genetic adaptation in plant populations along elevation gradients in mountains have a long history, but there has until now been neither a synthesis of how frequently plant populations exhibit adaptation to elevation nor an evaluation of how consistent underlying trait differences across species are. We reviewed studies of adaptation along elevation gradients (i) from a meta‐analysis of phenotypic differentiation of three traits (height, biomass and phenology) from plants growing in 70 common garden experiments; (ii) by testing elevation adaptation using three fitness proxies (survival, reproductive output and biomass) from 14 reciprocal transplant experiments; (iii) by qualitatively assessing information at the molecular level, from 10 genomewide surveys and candidate gene approaches. We found that plants originating from high elevations were generally shorter and produced less biomass, but phenology did not vary consistently. We found significant evidence for elevation adaptation in terms of survival and biomass, but not for reproductive output. Variation in phenotypic and fitness responses to elevation across species was not related to life history traits or to environmental conditions. Molecular studies, which have focussed mainly on loci related to plant physiology and phenology, also provide evidence for adaptation along elevation gradients. Together, these studies indicate that genetically based trait differentiation and adaptation to elevation are widespread in plants. We conclude that a better understanding of the mechanisms underlying adaptation, not only to elevation but also to environmental change, will require more studies combining the ecological and molecular approaches. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
35. Understanding ecosystems of the future will require more than realistic climate change experiments – A response to Korell et al.
- Author
-
De Boeck, Hans J., Bloor, Juliette M. G., Aerts, Rien, Bahn, Michael, Beier, Claus, Emmett, Bridget A., Estiarte, Marc, Grünzweig, José M., Halbritter, Aud H., Holub, Petr, Jentsch, Anke, Klem, Karel, Kreyling, Juergen, Kröel‐Dulay, György, Larsen, Klaus Steenberg, Milcu, Alexandru, Roy, Jacques, Sigurdsson, Bjarni D., Smith, Melinda D., and Sternberg, Marcelo
- Abstract
This article is a response to Korell et al., 26, 325–327; See also the Commentary on this article by Muller et al., 26, e4–e5; See also the response to this Letter to the Editor by Korell et al., 26, 328–329. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
36. Plastic and genetic responses to shifts in snowmelt time affects the reproductive phenology and growth of Ranunculus acris.
- Author
-
Delnevo, Nicola, Petraglia, Alessandro, Carbognani, Michele, Vandvik, Vigdis, and Halbritter, Aud H.
- Subjects
- *
RANUNCULUS acris , *PLANT reproduction , *PLANT growth , *SNOWMELT , *METEOROLOGICAL precipitation - Abstract
Changes in both temperature and precipitation will affect snowmelt time at high elevation, thereby influencing plant reproduction and growth. Species can respond to changed climate with phenotypic plasticity or genetic adaptation, and these responses might vary at different levels of advanced and delayed snowmelt time. Here we mimicked future climate change projections for western Norway by transplanting individuals of Ranunculus acris towards warmer, wetter and warmer & wetter climates. And we replicated the experiment along regional-scale temperature and precipitation gradients. This setup resulted in both advanced (warmer and warmer & wetter transplants) and delayed (wetter transplants) snowmelt in the experimental sites. We recorded phenological development and growth over one growing season. The reproductive phenology of the transplanted R. acris individuals was affected by both phenotypic plasticity and genetic differences between populations of different origins, while growth showed only plastic responses. Plants expressed high plasticity to both advanced and delayed snowmelt time by acceleration of the onset of buds, flowers and fruits. Only the plants from wet and high-elevation sites showed a small response to advanced SMT. The late snowmelt time these populations experience could potentially cause high selection pressure leading to more constrains in plasticity. When grown under common conditions, plants from late snowmelt sites responded with earlier onset of phenological development, suggesting that the timing of snowmelt exerts strong selection on reproduction. To project species fates under future climate we need to consider the interplay between genetic adaptation and plastic responses under different climate contexts, especially towards the species range limits. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
37. Global maps of soil temperature.
- Author
-
Lembrechts JJ, van den Hoogen J, Aalto J, Ashcroft MB, De Frenne P, Kemppinen J, Kopecký M, Luoto M, Maclean IMD, Crowther TW, Bailey JJ, Haesen S, Klinges DH, Niittynen P, Scheffers BR, Van Meerbeek K, Aartsma P, Abdalaze O, Abedi M, Aerts R, Ahmadian N, Ahrends A, Alatalo JM, Alexander JM, Allonsius CN, Altman J, Ammann C, Andres C, Andrews C, Ardö J, Arriga N, Arzac A, Aschero V, Assis RL, Assmann JJ, Bader MY, Bahalkeh K, Barančok P, Barrio IC, Barros A, Barthel M, Basham EW, Bauters M, Bazzichetto M, Marchesini LB, Bell MC, Benavides JC, Benito Alonso JL, Berauer BJ, Bjerke JW, Björk RG, Björkman MP, Björnsdóttir K, Blonder B, Boeckx P, Boike J, Bokhorst S, Brum BNS, Brůna J, Buchmann N, Buysse P, Camargo JL, Campoe OC, Candan O, Canessa R, Cannone N, Carbognani M, Carnicer J, Casanova-Katny A, Cesarz S, Chojnicki B, Choler P, Chown SL, Cifuentes EF, Čiliak M, Contador T, Convey P, Cooper EJ, Cremonese E, Curasi SR, Curtis R, Cutini M, Dahlberg CJ, Daskalova GN, de Pablo MA, Della Chiesa S, Dengler J, Deronde B, Descombes P, Di Cecco V, Di Musciano M, Dick J, Dimarco RD, Dolezal J, Dorrepaal E, Dušek J, Eisenhauer N, Eklundh L, Erickson TE, Erschbamer B, Eugster W, Ewers RM, Exton DA, Fanin N, Fazlioglu F, Feigenwinter I, Fenu G, Ferlian O, Fernández Calzado MR, Fernández-Pascual E, Finckh M, Higgens RF, Forte TGW, Freeman EC, Frei ER, Fuentes-Lillo E, García RA, García MB, Géron C, Gharun M, Ghosn D, Gigauri K, Gobin A, Goded I, Goeckede M, Gottschall F, Goulding K, Govaert S, Graae BJ, Greenwood S, Greiser C, Grelle A, Guénard B, Guglielmin M, Guillemot J, Haase P, Haider S, Halbritter AH, Hamid M, Hammerle A, Hampe A, Haugum SV, Hederová L, Heinesch B, Helfter C, Hepenstrick D, Herberich M, Herbst M, Hermanutz L, Hik DS, Hoffrén R, Homeier J, Hörtnagl L, Høye TT, Hrbacek F, Hylander K, Iwata H, Jackowicz-Korczynski MA, Jactel H, Järveoja J, Jastrzębowski S, Jentsch A, Jiménez JJ, Jónsdóttir IS, Jucker T, Jump AS, Juszczak R, Kanka R, Kašpar V, Kazakis G, Kelly J, Khuroo AA, Klemedtsson L, Klisz M, Kljun N, Knohl A, Kobler J, Kollár J, Kotowska MM, Kovács B, Kreyling J, Lamprecht A, Lang SI, Larson C, Larson K, Laska K, le Maire G, Leihy RI, Lens L, Liljebladh B, Lohila A, Lorite J, Loubet B, Lynn J, Macek M, Mackenzie R, Magliulo E, Maier R, Malfasi F, Máliš F, Man M, Manca G, Manco A, Manise T, Manolaki P, Marciniak F, Matula R, Mazzolari AC, Medinets S, Medinets V, Meeussen C, Merinero S, Mesquita RCG, Meusburger K, Meysman FJR, Michaletz ST, Milbau A, Moiseev D, Moiseev P, Mondoni A, Monfries R, Montagnani L, Moriana-Armendariz M, Morra di Cella U, Mörsdorf M, Mosedale JR, Muffler L, Muñoz-Rojas M, Myers JA, Myers-Smith IH, Nagy L, Nardino M, Naujokaitis-Lewis I, Newling E, Nicklas L, Niedrist G, Niessner A, Nilsson MB, Normand S, Nosetto MD, Nouvellon Y, Nuñez MA, Ogaya R, Ogée J, Okello J, Olejnik J, Olesen JE, Opedal ØH, Orsenigo S, Palaj A, Pampuch T, Panov AV, Pärtel M, Pastor A, Pauchard A, Pauli H, Pavelka M, Pearse WD, Peichl M, Pellissier L, Penczykowski RM, Penuelas J, Petit Bon M, Petraglia A, Phartyal SS, Phoenix GK, Pio C, Pitacco A, Pitteloud C, Plichta R, Porro F, Portillo-Estrada M, Poulenard J, Poyatos R, Prokushkin AS, Puchalka R, Pușcaș M, Radujković D, Randall K, Ratier Backes A, Remmele S, Remmers W, Renault D, Risch AC, Rixen C, Robinson SA, Robroek BJM, Rocha AV, Rossi C, Rossi G, Roupsard O, Rubtsov AV, Saccone P, Sagot C, Sallo Bravo J, Santos CC, Sarneel JM, Scharnweber T, Schmeddes J, Schmidt M, Scholten T, Schuchardt M, Schwartz N, Scott T, Seeber J, Segalin de Andrade AC, Seipel T, Semenchuk P, Senior RA, Serra-Diaz JM, Sewerniak P, Shekhar A, Sidenko NV, Siebicke L, Siegwart Collier L, Simpson E, Siqueira DP, Sitková Z, Six J, Smiljanic M, Smith SW, Smith-Tripp S, Somers B, Sørensen MV, Souza JJLL, Souza BI, Souza Dias A, Spasojevic MJ, Speed JDM, Spicher F, Stanisci A, Steinbauer K, Steinbrecher R, Steinwandter M, Stemkovski M, Stephan JG, Stiegler C, Stoll S, Svátek M, Svoboda M, Tagesson T, Tanentzap AJ, Tanneberger F, Theurillat JP, Thomas HJD, Thomas AD, Tielbörger K, Tomaselli M, Treier UA, Trouillier M, Turtureanu PD, Tutton R, Tyystjärvi VA, Ueyama M, Ujházy K, Ujházyová M, Uogintas D, Urban AV, Urban J, Urbaniak M, Ursu TM, Vaccari FP, Van de Vondel S, van den Brink L, Van Geel M, Vandvik V, Vangansbeke P, Varlagin A, Veen GF, Veenendaal E, Venn SE, Verbeeck H, Verbrugggen E, Verheijen FGA, Villar L, Vitale L, Vittoz P, Vives-Ingla M, von Oppen J, Walz J, Wang R, Wang Y, Way RG, Wedegärtner REM, Weigel R, Wild J, Wilkinson M, Wilmking M, Wingate L, Winkler M, Wipf S, Wohlfahrt G, Xenakis G, Yang Y, Yu Z, Yu K, Zellweger F, Zhang J, Zhang Z, Zhao P, Ziemblińska K, Zimmermann R, Zong S, Zyryanov VI, Nijs I, and Lenoir J
- Subjects
- Climate Change, Microclimate, Temperature, Ecosystem, Soil
- Abstract
Research in global change ecology relies heavily on global climatic grids derived from estimates of air temperature in open areas at around 2 m above the ground. These climatic grids do not reflect conditions below vegetation canopies and near the ground surface, where critical ecosystem functions occur and most terrestrial species reside. Here, we provide global maps of soil temperature and bioclimatic variables at a 1-km
2 resolution for 0-5 and 5-15 cm soil depth. These maps were created by calculating the difference (i.e. offset) between in situ soil temperature measurements, based on time series from over 1200 1-km2 pixels (summarized from 8519 unique temperature sensors) across all the world's major terrestrial biomes, and coarse-grained air temperature estimates from ERA5-Land (an atmospheric reanalysis by the European Centre for Medium-Range Weather Forecasts). We show that mean annual soil temperature differs markedly from the corresponding gridded air temperature, by up to 10°C (mean = 3.0 ± 2.1°C), with substantial variation across biomes and seasons. Over the year, soils in cold and/or dry biomes are substantially warmer (+3.6 ± 2.3°C) than gridded air temperature, whereas soils in warm and humid environments are on average slightly cooler (-0.7 ± 2.3°C). The observed substantial and biome-specific offsets emphasize that the projected impacts of climate and climate change on near-surface biodiversity and ecosystem functioning are inaccurately assessed when air rather than soil temperature is used, especially in cold environments. The global soil-related bioclimatic variables provided here are an important step forward for any application in ecology and related disciplines. Nevertheless, we highlight the need to fill remaining geographic gaps by collecting more in situ measurements of microclimate conditions to further enhance the spatiotemporal resolution of global soil temperature products for ecological applications., (© 2022 The Authors. Global Change Biology published by John Wiley & Sons Ltd.)- Published
- 2022
- Full Text
- View/download PDF
38. From a crisis to an opportunity: Eight insights for doing science in the COVID-19 era and beyond.
- Author
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Chacón-Labella J, Boakye M, Enquist BJ, Farfan-Rios W, Gya R, Halbritter AH, Middleton SL, von Oppen J, Pastor-Ploskonka S, Strydom T, Vandvik V, and Geange SR
- Abstract
The COVID-19 crisis has forced researchers in Ecology to change the way we work almost overnight. Nonetheless, the pandemic has provided us with several novel components for a new way of conducting science. In this perspective piece, we summarize eight central insights that are helping us, as early career researchers, navigate the uncertainties, fears, and challenges of advancing science during the COVID-19 pandemic. We highlight how innovative, collaborative, and often Open Science-driven developments that have arisen from this crisis can form a blueprint for a community reinvention in academia. Our insights include personal approaches to managing our new reality, maintaining capacity to focus and resilience in our projects, and a variety of tools that facilitate remote collaboration. We also highlight how, at a community level, we can take advantage of online communication platforms for gaining accessibility to conferences and meetings, and for maintaining research networks and community engagement while promoting a more diverse and inclusive community. Overall, we are confident that these practices can support a more inclusive and kinder scientific culture for the longer term., Competing Interests: The authors declare no competing interests., (© 2020 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.)
- Published
- 2020
- Full Text
- View/download PDF
39. Next-generation field courses: Integrating Open Science and online learning.
- Author
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Geange SR, von Oppen J, Strydom T, Boakye M, Gauthier TJ, Gya R, Halbritter AH, Jessup LH, Middleton SL, Navarro J, Pierfederici ME, Chacón-Labella J, Cotner S, Farfan-Rios W, Maitner BS, Michaletz ST, Telford RJ, Enquist BJ, and Vandvik V
- Abstract
As Open Science practices become more commonplace, there is a need for the next generation of scientists to be well versed in these aspects of scientific research. Yet, many training opportunities for early career researchers (ECRs) could better emphasize or integrate Open Science elements. Field courses provide opportunities for ECRs to apply theoretical knowledge, practice new methodological approaches, and gain an appreciation for the challenges of real-life research, and could provide an excellent platform for integrating training in Open Science practices. Our recent experience, as primarily ECRs engaged in a field course interrupted by COVID-19, led us to reflect on the potential to enhance learning outcomes in field courses by integrating Open Science practices and online learning components. Specifically, we highlight the opportunity for field courses to align teaching activities with the recent developments and trends in how we conduct research, including training in: publishing registered reports, collecting data using standardized methods, adopting high-quality data documentation, managing data through reproducible workflows, and sharing and publishing data through appropriate channels. We also discuss how field courses can use online tools to optimize time in the field, develop open access resources, and cultivate collaborations. By integrating these elements, we suggest that the next generation of field courses will offer excellent arenas for participants to adopt Open Science practices., Competing Interests: None declared., (© 2020 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.)
- Published
- 2020
- Full Text
- View/download PDF
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