144 results on '"Dobigeon, Nicolas"'
Search Results
2. CD-GAN: A robust fusion-based generative adversarial network for unsupervised remote sensing change detection with heterogeneous sensors
- Author
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Wang, Jin-Ju, Dobigeon, Nicolas, Chabert, Marie, Wang, Ding-Cheng, Huang, Ting-Zhu, and Huang, Jie
- Published
- 2024
- Full Text
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3. Compartment model-based nonlinear unmixing for kinetic analysis of dynamic PET images
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Cavalcanti, Yanna Cruz, Oberlin, Thomas, Ferraris, Vinicius, Dobigeon, Nicolas, Ribeiro, Maria, and Tauber, Clovis
- Published
- 2023
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4. Robust fusion algorithms for unsupervised change detection between multi-band optical images — A comprehensive case study
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Ferraris, Vinicius, Dobigeon, Nicolas, and Chabert, Marie
- Published
- 2020
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5. Fast reconstruction of atomic-scale STEM-EELS images from sparse sampling
- Author
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Monier, Etienne, Oberlin, Thomas, Brun, Nathalie, Li, Xiaoyan, Tencé, Marcel, and Dobigeon, Nicolas
- Published
- 2020
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6. Matrix cofactorization for joint representation learning and supervised classification – Application to hyperspectral image analysis
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Lagrange, Adrien, Fauvel, Mathieu, May, Stéphane, Bioucas-Dias, José, and Dobigeon, Nicolas
- Published
- 2020
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7. Coupled dictionary learning for unsupervised change detection between multimodal remote sensing images
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Ferraris, Vinicius, Dobigeon, Nicolas, Cavalcanti, Yanna, Oberlin, Thomas, and Chabert, Marie
- Published
- 2019
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- View/download PDF
8. Hierarchical Bayesian image analysis: From low-level modeling to robust supervised learning
- Author
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Lagrange, Adrien, Fauvel, Mathieu, May, Stéphane, and Dobigeon, Nicolas
- Published
- 2019
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9. Unmixing dynamic PET images with variable specific binding kinetics
- Author
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Cavalcanti, Yanna Cruz, Oberlin, Thomas, Dobigeon, Nicolas, Stute, Simon, Ribeiro, Maria, and Tauber, Clovis
- Published
- 2018
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10. Assessment of Essential Information in the Fourier Domain to Accelerate Raman Hyperspectral Microimaging.
- Author
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Coic, Laureen, Vitale, Raffaele, Moreau, Myriam, Rousseau, David, de Morais Goulart, José Henrique, Dobigeon, Nicolas, and Ruckebusch, Cyril
- Published
- 2023
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11. Variational semi-blind sparse deconvolution with orthogonal kernel bases and its application to MRFM
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Park, Se Un, Dobigeon, Nicolas, and Hero, Alfred O.
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- 2014
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12. Spatial–Spectral Multiscale Sparse Unmixing for Hyperspectral Images.
- Author
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Ince, Taner and Dobigeon, Nicolas
- Abstract
We propose a simple yet efficient sparse unmixing method for hyperspectral images. It exploits the spatial and spectral properties of hyperspectral images by designing a new regularization informed by multiscale analysis. The proposed approach consists of two steps. First, a sparse unmixing is conducted on a coarse hyperspectral image resulting from a spatial smoothing of the original data. The estimated coarse abundance map is subsequently used to design two weighting terms summarizing the spatial and spectral properties of the image. They are combined to define a sparse regularization embedded into a unmixing problem associated with the original hyperspectral image at full resolution. The performance of the proposed method is assessed with numerous experiments conducted on synthetic and real datasets. It is shown to compete favorably with state-of-the-art methods from the literature with lower computational complexity. [ABSTRACT FROM AUTHOR]
- Published
- 2023
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13. Toward Fast Transform Learning
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Chabiron, Olivier, Malgouyres, François, Tourneret, Jean-Yves, and Dobigeon, Nicolas
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- 2015
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14. Bayesian separation of spectral sources under non-negativity and full additivity constraints
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Dobigeon, Nicolas, Moussaoui, Saïd, Tourneret, Jean-Yves, and Carteret, Cédric
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- 2009
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15. Semi-supervised linear spectral unmixing using a hierarchical Bayesian model for hyperspectral imagery
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Dobigeon, Nicolas, Tourneret, Jean-Yves, and Chein-I Chang
- Subjects
Bayesian statistical decision theory -- Usage ,Markov processes -- Analysis ,Random noise theory -- Analysis ,Signal processing -- Research ,Digital signal processor ,Business ,Computers ,Electronics ,Electronics and electrical industries - Abstract
A hierarchical Bayesian model is presented for hyperspectral image unmixing. An extension of the algorithm is studied for mixtures with unknown numbers of spectral components belonging to a known library.
- Published
- 2008
16. Joint segmentation of piecewise constant autoregressive processes by using a hierarchical model and a Bayesian sampling approach
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Dobigeon, Nicolas, Tourneret, Jean-Yves, and Davy, Manuel
- Subjects
Bayesian statistical decision theory -- Usage ,Markov processes -- Analysis ,Signal processing -- Methods ,Monte Carlo method -- Usage ,Digital signal processor ,Business ,Computers ,Electronics ,Electronics and electrical industries - Abstract
A joint segmentation algorithm is proposed for piecewise constant autoregressive (AR) processes recorded by several independent sensors. The results are illustrated by several simulations conducted with synthetic signals and real arc-tracking and speech signals.
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- 2007
17. Joint segmentation of multivariate astronomical time series: Bayesian sampling with a hierarchical model
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Dobigeon, Nicolas, Tourneret, Jean-Yves, and Scargle, Jeffrey D.
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Poisson distribution -- Analysis ,Photons -- Research ,Bayesian statistical decision theory ,Business ,Computers ,Electronics ,Electronics and electrical industries - Abstract
Bayesian sampling algorithms are studied for segmenting single and multiple time series by obeying Poisson distributions with piecewise constant parameters. A Gibbs sampling strategy has allowed joint estimation of the unknown parameters and hyperparameters and the results obtained from synthetic and real photon counting data have shown the performance of the proposed algorithm.
- Published
- 2007
18. Joint segmentation of wind speed and direction using a hierarchical model
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Dobigeon, Nicolas and Tourneret, Jean-Yves
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- 2007
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19. High-Dimensional Gaussian Sampling: A Review and a Unifying Approach Based on a Stochastic Proximal Point Algorithm.
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Vono, Maxime, Dobigeon, Nicolas, and Chainais, Pierre
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MARKOV chain Monte Carlo , *NUMERICAL solutions for linear algebra , *MATHEMATICAL optimization , *ALGORITHMS - Abstract
Efficient sampling from a high-dimensional Gaussian distribution is an old but high-stakes issue. Vanilla Cholesky samplers imply a computational cost and memory requirements that can rapidly become prohibitive in high dimensions. To tackle these issues, multiple methods have been proposed from different communities ranging from iterative numerical linear algebra to Markov chain Monte Carlo (MCMC) approaches. Surprisingly, no complete review and comparison of these methods has been conducted. This paper aims to review all these approaches by pointing out their differences, close relations, benefits, and limitations. In addition to reviewing the state of the art, this paper proposes a unifying Gaussian simulation framework by deriving a stochastic counterpart of the celebrated proximal point algorithm in optimization. This framework offers a novel and unifying revisiting of most of the existing MCMC approaches while also extending them. Guidelines to choosing the appropriate Gaussian simulation method for a given sampling problem in high dimensions are proposed and illustrated with numerical examples. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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20. Provably Robust Blind Source Separation of Linear-Quadratic Near-Separable Mixtures.
- Author
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Kervazo, Christophe, Gillis, Nicolas, and Dobigeon, Nicolas
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BLIND source separation ,MATRIX decomposition - Abstract
In this work, we consider the problem of blind source separation (BSS) by departing from the usual linear model and focusing on the linear-quadratic (LQ) one. We propose two provably robust and computationally tractable algorithms to tackle this problem under separability assumptions which require the sources to appear as samples in the data set. The first algorithm, referred to as SNPALQ, generalizes the successive nonnegative projection algorithm (SNPA), designed for linear BSS. By explicitly modeling the product terms inherent to the LQ model along the iterations of the SNPA scheme, the nonlinear contributions of the mixing are mitigated, thus improving the separation quality. SNPALQ is shown to be able to recover the ground truth factors that generated the data, even in the presence of noise. The second algorithm is a brute force (BF) algorithm, which can be used as a postprocessing step for SNPALQ. It then enables one to discard the spurious (mixed) samples extracted by SNPALQ, thus broadening its applicability. The BF is in turn shown to be robust to noise (under potentially easier-to-check conditions than those of SNPALQ). We show that SNPALQ with and without the BF postprocessing is relevant in realistic numerical experiments. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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21. Asymptotically Exact Data Augmentation: Models, Properties, and Algorithms.
- Author
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Vono, Maxime, Dobigeon, Nicolas, and Chainais, Pierre
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DATA augmentation , *DATA modeling , *MARKOV chain Monte Carlo - Abstract
Data augmentation, by the introduction of auxiliary variables, has become an ubiquitous technique to improve convergence properties, simplify the implementation or reduce the computational time of inference methods such as Markov chain Monte Carlo ones. Nonetheless, introducing appropriate auxiliary variables while preserving the initial target probability distribution and offering a computationally efficient inference cannot be conducted in a systematic way. To deal with such issues, this article studies a unified framework, coined asymptotically exact data augmentation (AXDA), which encompasses both well-established and more recent approximate augmented models. In a broader perspective, this article shows that AXDA models can benefit from interesting statistical properties and yield efficient inference algorithms. In non-asymptotic settings, the quality of the proposed approximation is assessed with several theoretical results. The latter are illustrated on standard statistical problems. including computer code for this article are available online. [ABSTRACT FROM AUTHOR]
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- 2021
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22. Matrix Cofactorization for Joint Spatial–Spectral Unmixing of Hyperspectral Images.
- Author
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Lagrange, Adrien, Fauvel, Mathieu, May, Stephane, and Dobigeon, Nicolas
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MATRIX decomposition ,TIKHONOV regularization ,MATRICES (Mathematics) ,AMBIGUITY ,IMAGE ,EVALUATION methodology ,TASK analysis - Abstract
Hyperspectral unmixing aims at identifying a set of elementary spectra and the corresponding mixture coefficients for each pixel of an image. As the elementary spectra correspond to the reflectance spectra of real materials, they are often very correlated, thus yielding an ill-conditioned problem. To enrich the model and reduce ambiguity due to the high correlation, it is common to introduce spatial information to complement the spectral information. The most common way to introduce spatial information is to rely on a spatial regularization of the abundance maps. In this article, instead of considering a simple but limited regularization process, spatial information is directly incorporated through the newly proposed context of spatial unmixing. Contextual features are extracted for each pixel, and this additional set of observations is decomposed according to a linear model. Finally, the spatial and spectral observations are unmixed jointly through a cofactorization model. In particular, this model introduces a coupling term used to identify clusters of shared spatial and spectral signatures. An evaluation of the proposed method is conducted on synthetic and real data and shows that results are accurate and also very meaningful since they describe both spatially and spectrally the various areas of the scene. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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23. Simulated JWST Data Sets for Multispectral and Hyperspectral Image Fusion.
- Author
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Guilloteau, Claire, Oberlin, Thomas, Berné, Olivier, Habart, Émilie, and Dobigeon, Nicolas
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- 2020
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24. Non‐linear unmixing of hyperspectral images using multiple‐kernel self‐organising maps.
- Author
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Rashwan, Shaheera, Dobigeon, Nicolas, Sheta, Walaa, and Hassan, Hanan
- Abstract
The spatial pixel resolution of common multispectral and hyperspectral sensors is generally not sufficient to avoid that multiple elementary materials contribute to the observed spectrum of a single pixel. To alleviate this limitation, spectral unmixing is a by‐pass procedure which consists in decomposing the observed spectra associated with these mixed pixels into a set of component spectra, or endmembers, and a set of corresponding proportions, or abundances, that represent the proportion of each endmember in these pixels. In this study, a spectral unmixing technique is proposed to handle the challenging scenario of non‐linear mixtures. This algorithm relies on a dedicated implementation of multiple‐kernel learning using self‐organising map proposed as a solver for the non‐linear unmixing problem. Based on a priori knowledge of the endmember spectra, it aims at estimating their relative abundances without specifying the non‐linear model under consideration. It is compared to state‐of‐the‐art algorithms using synthetic yet realistic and real hyperspectral images. Results obtained from experiments conducted on synthetic and real hyperspectral images assess the potential and the effectiveness of this unmixing strategy. Finally, the relevance and potential parallel implementation of the proposed method is demonstrated. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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25. Factor Analysis of Dynamic PET Images: Beyond Gaussian Noise.
- Author
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Cavalcanti, Yanna Cruz, Oberlin, Thomas, Dobigeon, Nicolas, Fevotte, Cedric, Stute, Simon, Ribeiro, Maria-Joao, and Tauber, Clovis
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IMAGE denoising ,RANDOM noise theory ,POSITRON emission tomography ,FACTOR analysis ,NONNEGATIVE matrices ,MATRIX decomposition - Abstract
Factor analysis has proven to be a relevant tool for extracting tissue time-activity curves (TACs) in dynamic PET images, since it allows for an unsupervised analysis of the data. Reliable and interpretable results are possible only if it is considered with respect to suitable noise statistics. However, the noise in reconstructed dynamic PET images is very difficult to characterize, despite the Poissonian nature of the count rates. Rather than explicitly modeling the noise distribution, this paper proposes to study the relevance of several divergence measures to be used within a factor analysis framework. To this end, the $\beta $ -divergence, widely used in other applicative domains, is considered to design the data-fitting term involved in three different factor models. The performances of the resulting algorithms are evaluated for different values of $\beta $ , in a range covering Gaussian, Poissonian, and Gamma-distributed noises. The results obtained on two different types of synthetic images and one real image show the interest of applying non-standard values of $\beta $ to improve the factor analysis. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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26. Hyperspectral Unmixing With Spectral Variability Using Adaptive Bundles and Double Sparsity.
- Author
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Uezato, Tatsumi, Fauvel, Mathieu, and Dobigeon, Nicolas
- Subjects
PIXELS ,DISTRIBUTION (Probability theory) ,DATA mining - Abstract
Spectral variability is one of the major issues when conducting hyperspectral unmixing. Within a given image composed of some elementary materials (herein referred to as endmember classes), the spectral signatures characterizing these classes may spatially vary due to intrinsic component fluctuations or external factors (illumination). These redundant multiple endmember spectra within each class adversely affect the performance of unmixing methods. This paper proposes a mixing model that explicitly incorporates a hierarchical structure of redundant multiple spectra representing each class. The proposed method is designed to promote sparsity on the selection of both spectra and classes within each pixel. The resulting unmixing algorithm is able to adaptively recover several bundles of endmember spectra associated with each class and robustly estimate abundances. In addition, its flexibility allows a variable number of classes to be present within each pixel of the hyperspectral image to be unmixed. The proposed method is compared with other state-of-the-art unmixing methods that incorporate sparsity using both simulated and real hyperspectral data. The results show that the proposed method can successfully determine the variable number of classes present within each class and estimate the corresponding class abundances. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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27. Partially Asynchronous Distributed Unmixing of Hyperspectral Images.
- Author
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Thouvenin, Pierre-Antoine, Dobigeon, Nicolas, and Tourneret, Jean-Yves
- Subjects
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HYPERSPECTRAL imaging systems , *IMAGE processing , *SIMULATION methods & models , *REMOTE sensing , *SIGNAL processing - Abstract
So far, the problem of unmixing large or multitemporal hyperspectral data sets has been specifically addressed in the remote sensing literature only by a few dedicated strategies. Among them, some attempts have been made within a distributed estimation framework, in particular, relying on the alternating direction method of multipliers. In this paper, we propose to study the interest of a partially asynchronous distributed unmixing procedure based on a recently proposed asynchronous algorithm. Under standard assumptions, the proposed algorithm inherits its convergence properties from recent contributions in nonconvex optimization, while allowing the problem of interest to be efficiently addressed. Comparisons with a distributed synchronous counterpart of the proposed unmixing procedure allow its interest to be assessed on synthetic and real data. Besides, thanks to its genericity and flexibility, the procedure investigated in this paper can be implemented to address various matrix factorization problems. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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28. Hyperspectral Image Unmixing With LiDAR Data-Aided Spatial Regularization.
- Author
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Uezato, Tatsumi, Fauvel, Mathieu, and Dobigeon, Nicolas
- Subjects
LIDAR ,HYPERSPECTRAL imaging systems ,PRINCIPAL components analysis ,DIGITAL elevation models ,LAPLACIAN operator - Abstract
Spectral unmixing (SU) methods incorporating the spatial regularizations have demonstrated increasing interest. Although spatial regularizers that promote smoothness of the abundance maps have been widely used, they may overly smooth these maps and, in particular, may not preserve edges present in the hyperspectral image. Existing unmixing methods usually ignore these edge structures or use edge information derived from the hyperspectral image itself. However, this information may be affected by the large amounts of noise or variations in illumination, leading to erroneous spatial information incorporated into the unmixing procedure. This paper proposes a simple yet powerful SU framework that incorporates external data [i.e. light detection and ranging (LiDAR) data]. The LiDAR measurements can be easily exploited to adjust the standard spatial regularizations applied to the unmixing process. The proposed framework is rigorously evaluated using two simulated data sets and a real hyperspectral image. It is compared with methods that rely on spatial information derived from a hyperspectral image. The results show that the proposed framework can provide better abundance estimates and, more specifically, can significantly improve the abundance estimates for the pixels affected by shadows. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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29. Detecting Changes Between Optical Images of Different Spatial and Spectral Resolutions: A Fusion-Based Approach.
- Author
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Ferraris, Vinicius, Chabert, Marie, Dobigeon, Nicolas, and Qi Wei
- Subjects
CHANGE-point problems ,HYPERSPECTRAL imaging systems ,IMAGE fusion ,MULTISPECTRAL imaging ,OPTICAL images - Abstract
Change detection (CD) is one of the most challenging issues when analyzing remotely sensed images. Comparing several multidate images acquired through the same kind of sensor is the most common scenario. Conversely, designing robust, flexible, and scalable algorithms for CD becomes even more challenging when the images have been acquired by two different kinds of sensors. This situation arises in the case of emergency under critical constraints. This paper presents, to the best of our knowledge, the first strategy to deal with optical images characterized by dissimilar spatial and spectral resolutions. Typical considered scenarios include CD between panchromatic, multispectral, and hyperspectral images. The proposed strategy consists of a three-step procedure: 1) inferring a high spatial and spectral resolution image by fusion of the two observed images characterized one by a low spatial resolution and the other by a low spectral resolution; 2) predicting two images with, respectively, the same spatial and spectral resolutions as the observed images by the degradation of the fused one; and 3) implementing a decision rule to each pair of observed and predicted images characterized by the same spatial and spectral resolutions to identify changes. To quantitatively assess the performance of the method, an experimental protocol is specifically designed, relying on synthetic yet physically plausible change rules applied to real images. The accuracy of the proposed framework is finally illustrated on real images. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
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30. Bayesian Selection for the $\ell _2$ -Potts Model Regularization Parameter: 1-D Piecewise Constant Signal Denoising.
- Author
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Frecon, Jordan, Pustelnik, Nelly, Dobigeon, Nicolas, Wendt, Herwig, and Abry, Patrice
- Subjects
SIGNAL denoising ,BAYESIAN analysis ,REGULARIZATION parameter ,MATHEMATICAL optimization ,STOCHASTIC analysis - Abstract
Piecewise constant denoising can be solved either by deterministic optimization approaches, based on the Potts model, or by stochastic Bayesian procedures. The former lead to low computational time but require the selection of a regularization parameter, whose value significantly impacts the achieved solution, and whose automated selection remains an involved and challenging problem. Conversely, fully Bayesian formalisms encapsulate the regularization parameter selection into hierarchical models, at the price of high computational costs. This contribution proposes an operational strategy that combines hierarchical Bayesian and Potts model formulations, with the double aim of automatically tuning the regularization parameter and maintaining computational efficiency. The proposed procedure relies on formally connecting a Bayesian framework to a $\ell _2$ -Potts functional. Behaviors and performance for the proposed piecewise constant denoising and regularization parameter tuning techniques are studied qualitatively and assessed quantitatively, and shown to compare favorably against those of a fully Bayesian hierarchical procedure, both in accuracy and computational load. [ABSTRACT FROM PUBLISHER]
- Published
- 2017
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31. A Split-and-Merge Approach for Hyperspectral Band Selection.
- Author
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Rashwan, Shaheera and Dobigeon, Nicolas
- Abstract
The problem of band selection (BS) is of great importance to handle the curse of dimensionality for hyperspectral image (HSI) applications (e.g., classification). This letter proposes an unsupervised BS approach based on a split-and-merge concept. This new approach provides relevant spectral sub-bands by splitting the adjacent bands without violating the physical meaning of the spectral data. Next, it merges highly correlated bands and sub-bands to reduce the dimensionality of the HSI. Experiments on three public data sets and comparison with state-of-the-art approaches show the efficiency of the proposed approach. [ABSTRACT FROM PUBLISHER]
- Published
- 2017
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32. Bayesian Antisparse Coding.
- Author
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Elvira, Clement, Chainais, Pierre, and Dobigeon, Nicolas
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DIGITAL communications ,GAUSSIAN processes ,STANDARD deviations ,BAYESIAN analysis ,PROBABILITY theory - Abstract
Sparse representations have proven their efficiency in solving a wide class of inverse problems encountered in signal and image processing. Conversely, enforcing the information to be spread uniformly over representation coefficients exhibits relevant properties in various applications such as robust encoding in digital communications. Antisparse regularization can be naturally expressed through an \ell \infty -norm penalty. This paper derives a probabilistic formulation of such representations. A new probability distribution, referred to as the democratic prior, is first introduced. Its main properties as well as three random variate generators for this distribution are derived. Then this probability distribution is used as a prior to promote antisparsity in a Gaussian linear model, yielding a fully Bayesian formulation of antisparse coding. Two Markov chain Monte Carlo algorithms are proposed to generate samples according to the posterior distribution. The first one is a standard Gibbs sampler. The second one uses Metropolis–Hastings moves that exploit the proximity mapping of the log-posterior distribution. These samples are used to approximate maximum a posteriori and minimum mean square error estimators of both parameters and hyperparameters. Simulations on synthetic data illustrate the performances of the two proposed samplers, for both complete and over-complete dictionaries. All results are compared to the recent deterministic variational FITRA algorithm. [ABSTRACT FROM PUBLISHER]
- Published
- 2017
- Full Text
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33. Multiband Image Fusion Based on Spectral Unmixing.
- Author
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Wei, Qi, Godsill, Simon, Bioucas-Dias, Jose, Dobigeon, Nicolas, Tourneret, Jean-Yves, and Chen, Marcus
- Subjects
IMAGE processing ,SYLVESTER matrix equations ,RANDOM noise theory ,MULTISPECTRAL imaging ,HYPERSPECTRAL imaging systems - Abstract
This paper presents a multiband image fusion algorithm based on unsupervised spectral unmixing for combining a high-spatial–low-spectral-resolution image and a low-spatial–high-spectral-resolution image. The widely used linear observation model (with additive Gaussian noise) is combined with the linear spectral mixture model to form the likelihoods of the observations. The nonnegativity and sum-to-one constraints resulting from the intrinsic physical properties of the abundances are introduced as prior information to regularize this ill-posed problem. The joint fusion and unmixing problem is then formulated as maximizing the joint posterior distribution with respect to the endmember signatures and abundance maps. This optimization problem is attacked with an alternating optimization strategy. The two resulting subproblems are convex and are solved efficiently using the alternating direction method of multipliers. Experiments are conducted for both synthetic and semi-real data. Simulation results show that the proposed unmixing-based fusion scheme improves both the abundance and endmember estimation compared with the state-of-the-art joint fusion and unmixing algorithms. [ABSTRACT FROM PUBLISHER]
- Published
- 2016
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34. R-FUSE: Robust Fast Fusion of Multiband Images Based on Solving a Sylvester Equation.
- Author
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Wei, Qi, Dobigeon, Nicolas, Tourneret, Jean-Yves, Bioucas-Dias, Jose, and Godsill, Simon
- Subjects
IMAGE fusion ,MULTISPECTRAL imaging ,SYLVESTER matrix equations - Abstract
This letter proposes a robust fast multiband image fusion method to merge a high-spatial low-spectral resolution image and a low-spatial high-spectral resolution image. Following the method recently developed by Wei et al., the generalized Sylvester matrix equation associated with the multiband image fusion problem is solved in a more robust and efficient way by exploiting the Woodbury formula, avoiding any permutation operation in the frequency domain as well as the blurring kernel invertibility assumption required in their method. Thanks to this improvement, the proposed algorithm requires fewer computational operations and is also more robust with respect to the blurring kernel compared with the one developed by Wei et al. The proposed new algorithm is tested with different priors considered by Wei et al. Our conclusion is that the proposed fusion algorithm is more robust than the one by Wei et al. with a reduced computational cost. [ABSTRACT FROM PUBLISHER]
- Published
- 2016
- Full Text
- View/download PDF
35. Online Unmixing of Multitemporal Hyperspectral Images Accounting for Spectral Variability.
- Author
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Thouvenin, Pierre-Antoine, Dobigeon, Nicolas, and Tourneret, Jean-Yves
- Subjects
- *
HYPERSPECTRAL imaging systems , *IMAGING systems , *MULTIMEDIA systems , *IMAGE storage & retrieval systems , *INFORMATION storage & retrieval systems - Abstract
Hyperspectral unmixing is aimed at identifying the reference spectral signatures composing a hyperspectral image and their relative abundance fractions in each pixel. In practice, the identified signatures may vary spectrally from an image to another due to varying acquisition conditions, thus inducing possibly significant estimation errors. Against this background, the hyperspectral unmixing of several images acquired over the same area is of considerable interest. Indeed, such an analysis enables the endmembers of the scene to be tracked and the corresponding endmember variability to be characterized. Sequential endmember estimation from a set of hyperspectral images is expected to provide improved performance when compared with methods analyzing the images independently. However, the significant size of the hyperspectral data precludes the use of batch procedures to jointly estimate the mixture parameters of a sequence of hyperspectral images. Provided that each elementary component is present in at least one image of the sequence, we propose to perform an online hyperspectral unmixing accounting for temporal endmember variability. The online hyperspectral unmixing is formulated as a two-stage stochastic program, which can be solved using a stochastic approximation. The performance of the proposed method is evaluated on synthetic and real data. Finally, a comparison with independent unmixing algorithms illustrates the interest of the proposed strategy. [ABSTRACT FROM PUBLISHER]
- Published
- 2016
- Full Text
- View/download PDF
36. Detection and Correction of Glitches in a Multiplexed Multichannel Data Stream—Application to the MADRAS Instrument.
- Author
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Wendt, Herwig, Dobigeon, Nicolas, Tourneret, Jean-Yves, Albinet, Mathieu, Goldstein, Christophe, and Karouche, Nadia
- Subjects
- *
IMAGE processing , *COMPUTER simulation , *DYNAMIC programming , *ALGORITHMS , *STREAMING technology - Abstract
This paper presents a new strategy to correct the Earth data corrupted by spurious samples that are randomly included in the multiplexed data stream provided by the MADRAS instrument. The proposed strategy relies on the construction of a trellis associated with each scan of the multichannel image, modeling the possible occurrences of these erroneous data. A specific weight that promotes the smooth behavior of the signals recorded in each channel is assigned to each transition between trellis states. The joint detection and correction of the erroneous data are conducted using a dynamic programming algorithm for minimizing the overall cost function throughout the trellis. Simulation results obtained on synthetic and real MADRAS data demonstrate the effectiveness of the proposed solution. [ABSTRACT FROM AUTHOR]
- Published
- 2016
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37. Hyperspectral Unmixing With Spectral Variability Using a Perturbed Linear Mixing Model.
- Author
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Thouvenin, Pierre-Antoine, Dobigeon, Nicolas, and Tourneret, Jean-Yves
- Subjects
- *
HYPERSPECTRAL imaging systems , *DATA modeling , *MATHEMATICAL optimization , *LINEAR matrix inequalities , *COMPUTER algorithms - Abstract
Given a mixed hyperspectral data set, linear unmixing aims at estimating the reference spectral signatures composing the data—referred to as endmembers—their abundance fractions and their number. In practice, the identified endmembers can vary spectrally within a given image and can thus be construed as variable instances of reference endmembers. Ignoring this variability induces estimation errors that are propagated into the unmixing procedure. To address this issue, endmember variability estimation consists of estimating the reference spectral signatures from which the estimated endmembers have been derived as well as their variability with respect to these references. This paper introduces a new linear mixing model that explicitly accounts for spatial and spectral endmember variabilities. The parameters of this model can be estimated using an optimization algorithm based on the alternating direction method of multipliers. The performance of the proposed unmixing method is evaluated on synthetic and real data. A comparison with state-of-the-art algorithms designed to model and estimate endmember variability allows the interest of the proposed unmixing solution to be appreciated. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
38. Nonlinear Hyperspectral Unmixing With Robust Nonnegative Matrix Factorization.
- Author
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Fevotte, Cedric and Dobigeon, Nicolas
- Subjects
- *
HYPERSPECTRAL imaging systems , *FACTORIZATION , *NONLINEAR theories , *SPECTRAL theory , *NONNEGATIVE matrices , *ROBUST control , *OUTLIERS (Statistics) - Abstract
We introduce a robust mixing model to describe hyperspectral data resulting from the mixture of several pure spectral signatures. The new model extends the commonly used linear mixing model by introducing an additional term accounting for possible nonlinear effects, that are treated as sparsely distributed additive outliers. With the standard nonnegativity and sum-to-one constraints inherent to spectral unmixing, our model leads to a new form of robust nonnegative matrix factorization with a group-sparse outlier term. The factorization is posed as an optimization problem, which is addressed with a block-coordinate descent algorithm involving majorization–minimization updates. Simulation results obtained on synthetic and real data show that the proposed strategy competes with the state-of-the-art linear and nonlinear unmixing methods. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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- View/download PDF
39. Hyperspectral and Multispectral Image Fusion Based on a Sparse Representation.
- Author
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Wei, Qi, Bioucas-Dias, Jose, Dobigeon, Nicolas, and Tourneret, Jean-Yves
- Subjects
HYPERSPECTRAL imaging systems ,MULTISPECTRAL imaging ,IMAGING systems ,ALGORITHMS ,ENCYCLOPEDIAS & dictionaries - Abstract
This paper presents a variational-based approach for fusing hyperspectral and multispectral images. The fusion problem is formulated as an inverse problem whose solution is the target image assumed to live in a lower dimensional subspace. A sparse regularization term is carefully designed, relying on a decomposition of the scene on a set of dictionaries. The dictionary atoms and the supports of the corresponding active coding coefficients are learned from the observed images. Then, conditionally on these dictionaries and supports, the fusion problem is solved via alternating optimization with respect to the target image (using the alternating direction method of multipliers) and the coding coefficients. Simulation results demonstrate the efficiency of the proposed algorithm when compared with state-of-the-art fusion methods. [ABSTRACT FROM PUBLISHER]
- Published
- 2015
- Full Text
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40. A Comparison of Nonlinear Mixing Models for Vegetated Areas Using Simulated and Real Hyperspectral Data.
- Author
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Dobigeon, Nicolas, Tits, Laurent, Somers, Ben, Altmann, Yoann, and Coppin, Pol
- Abstract
Spectral unmixing (SU) is a crucial processing step when analyzing hyperspectral data. In such analysis, most of the work in the literature relies on the widely acknowledged linear mixing model to describe the observed pixels. Unfortunately, this model has been shown to be of limited interest for specific scenes, in particular when acquired over vegetated areas. Consequently, in the past few years, several nonlinear mixing models have been introduced to take nonlinear effects into account while performing SU. These models have been proposed empirically, however, without any thorough validation. In this paper, the authors take advantage of two sets of real and physical-based simulated data to validate the accuracy of various nonlinear models in vegetated areas. These physics-based models, and their corresponding unmixing algorithms, are evaluated with respect to their ability of fitting the measured spectra and providing an accurate estimation of the abundance coefficients, considered as the spatial distribution of the materials in each pixel. [ABSTRACT FROM PUBLISHER]
- Published
- 2014
- Full Text
- View/download PDF
41. Joint Bayesian Estimation of Close Subspaces from Noisy Measurements.
- Author
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Besson, Olivier, Dobigeon, Nicolas, and Tourneret, Jean-Yves
- Subjects
BAYESIAN analysis ,SUBSPACES (Mathematics) ,GIBBS' equation ,SIGNAL-to-noise ratio ,DECOMPOSITION method - Abstract
In this letter, we consider two sets of observations defined as subspace signals embedded in noise and we wish to analyze the distance between these two subspaces. The latter entails evaluating the angles between the subspaces, an issue reminiscent of the well-known Procrustes problem. A Bayesian approach is investigated where the subspaces of interest are considered as random with a joint prior distribution (namely a Bingham distribution), which allows the closeness of the two subspaces to be parameterized. Within this framework, the minimum mean-square distance estimator of both subspaces is formulated and implemented via a Gibbs sampler. A simpler scheme based on alternative maximum a posteriori estimation is also presented. The new schemes are shown to provide more accurate estimates of the angles between the subspaces, compared to singular value decomposition based independent estimation of the two subspaces. [ABSTRACT FROM AUTHOR]
- Published
- 2014
- Full Text
- View/download PDF
42. Nonlinear Unmixing of Hyperspectral Images: Models and Algorithms.
- Author
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Dobigeon, Nicolas, Tourneret, Jean-Yves, Richard, Cedric, Bermudez, Jose Carlos M., McLaughlin, Stephen, and Hero, Alfred O.
- Abstract
When considering the problem of unmixing hyperspectral images, most of the literature in the geoscience and image processing areas relies on the widely used linear mixing model (LMM). However, the LMM may be not valid, and other nonlinear models need to be considered, for instance, when there are multiscattering effects or intimate interactions. Consequently, over the last few years, several significant contributions have been proposed to overcome the limitations inherent in the LMM. In this article, we present an overview of recent advances in nonlinear unmixing modeling. [ABSTRACT FROM PUBLISHER]
- Published
- 2014
- Full Text
- View/download PDF
43. Unsupervised Bayesian linear unmixing of gene expression microarrays.
- Author
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Bazot, Cécile, Dobigeon, Nicolas, Tourneret, Jean-Yves, Zaas, Aimee K., Ginsburg, Geoffrey S., and Hero, Alfred O.
- Subjects
- *
BAYESIAN analysis , *GIBBS sampling , *PROTEIN microarrays , *PROBABILITY theory , *BIOINFORMATICS - Abstract
Background: This paper introduces a new constrained model and the corresponding algorithm, called unsupervised Bayesian linear unmixing (uBLU), to identify biological signatures from high dimensional assays like gene expression microarrays. The basis for uBLU is a Bayesian model for the data samples which are represented as an additive mixture of random positive gene signatures, called factors, with random positive mixing coefficients, called factor scores, that specify the relative contribution of each signature to a specific sample. The particularity of the proposed method is that uBLU constrains the factor loadings to be non-negative and the factor scores to be probability distributions over the factors. Furthermore, it also provides estimates of the number of factors. A Gibbs sampling strategy is adopted here to generate random samples according to the posterior distribution of the factors, factor scores, and number of factors. These samples are then used to estimate all the unknown parameters. Results: Firstly, the proposed uBLU method is applied to several simulated datasets with known ground truth and compared with previous factor decomposition methods, such as principal component analysis (PCA), non negative matrix factorization (NMF), Bayesian factor regression modeling (BFRM), and the gradient-based algorithm for general matrix factorization (GB-GMF). Secondly, we illustrate the application of uBLU on a real time-evolving gene expression dataset from a recent viral challenge study in which individuals have been inoculated with influenza A/H3N2/Wisconsin. We show that the uBLU method significantly outperforms the other methods on the simulated and real data sets considered here. Conclusions: The results obtained on synthetic and real data illustrate the accuracy of the proposed uBLU method when compared to other factor decomposition methods from the literature (PCA, NMF, BFRM, and GB-GMF). The uBLU method identifies an inflammatory component closely associated with clinical symptom scores collected during the study. Using a constrained model allows recovery of all the inflammatory genes in a single factor. [ABSTRACT FROM AUTHOR]
- Published
- 2013
- Full Text
- View/download PDF
44. Nonlinearity Detection in Hyperspectral Images Using a Polynomial Post-Nonlinear Mixing Model.
- Author
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Altmann, Yoann, Dobigeon, Nicolas, and Tourneret, Jean-Yves
- Subjects
- *
NONLINEAR theories , *IMAGE converters , *HYPERSPECTRAL imaging systems , *IMAGE processing , *MATHEMATICAL models , *PARAMETER estimation , *PIXELS , *RANDOM noise theory , *MAXIMUM likelihood statistics - Abstract
This paper studies a nonlinear mixing model for hyperspectral image unmixing and nonlinearity detection. The proposed model assumes that the pixel reflectances are nonlinear functions of pure spectral components contaminated by an additive white Gaussian noise. These nonlinear functions are approximated by polynomials leading to a polynomial post-nonlinear mixing model. We have shown in a previous paper that the parameters involved in the resulting model can be estimated using least squares methods. A generalized likelihood ratio test based on the estimator of the nonlinearity parameter is proposed to decide whether a pixel of the image results from the commonly used linear mixing model or from a more general nonlinear mixing model. To compute the test statistic associated with the nonlinearity detection, we propose to approximate the variance of the estimated nonlinearity parameter by its constrained Cramér–Rao bound. The performance of the detection strategy is evaluated via simulations conducted on synthetic and real data. More precisely, synthetic data have been generated according to the standard linear mixing model and three nonlinear models from the literature. The real data investigated in this study are extracted from the Cuprite image, which shows that some minerals seem to be nonlinearly mixed in this image. Finally, it is interesting to note that the estimated abundance maps obtained with the post-nonlinear mixing model are in good agreement with results obtained in previous studies. [ABSTRACT FROM PUBLISHER]
- Published
- 2013
- Full Text
- View/download PDF
45. Adaptive Markov Random Fields for Joint Unmixing and Segmentation of Hyperspectral Images.
- Author
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Eches, Olivier, Benediktsson, Jón Atli, Dobigeon, Nicolas, and Tourneret, Jean-Yves
- Subjects
MARKOV random fields ,STOCHASTIC processes ,PROBABILITY theory ,HYPERSPECTRAL imaging systems ,PIXELS ,IMAGE processing - Abstract
Linear spectral unmixing is a challenging problem in hyperspectral imaging that consists of decomposing an observed pixel into a linear combination of pure spectra (or endmembers) with their corresponding proportions (or abundances). Endmember extraction algorithms can be employed for recovering the spectral signatures while abundances are estimated using an inversion step. Recent works have shown that exploiting spatial dependencies between image pixels can improve spectral unmixing. Markov random fields (MRF) are classically used to model these spatial correlations and partition the image into multiple classes with homogeneous abundances. This paper proposes to define the MRF sites using similarity regions. These regions are built using a self-complementary area filter that stems from the morphological theory. This kind of filter divides the original image into flat zones where the underlying pixels have the same spectral values. Once the MRF has been clearly established, a hierarchical Bayesian algorithm is proposed to estimate the abundances, the class labels, the noise variance, and the corresponding hyperparameters. A hybrid Gibbs sampler is constructed to generate samples according to the corresponding posterior distribution of the unknown parameters and hyperparameters. Simulations conducted on synthetic and real AVIRIS data demonstrate the good performance of the algorithm. [ABSTRACT FROM PUBLISHER]
- Published
- 2013
- Full Text
- View/download PDF
46. Spectral mixture analysis of EELS spectrum-images
- Author
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Dobigeon, Nicolas and Brun, Nathalie
- Subjects
- *
MIXTURES spectra , *IMAGE analysis , *HYPERSPECTRAL imaging systems , *INDEPENDENT component analysis , *ELECTRON energy loss spectroscopy , *PIXELS , *MULTIVARIATE analysis , *REFLECTANCE spectroscopy - Abstract
Abstract: Recent advances in detectors and computer science have enabled the acquisition and the processing of multidimensional datasets, in particular in the field of spectral imaging. Benefiting from these new developments, Earth scientists try to recover the reflectance spectra of macroscopic materials (e.g., water, grass, mineral types…) present in an observed scene and to estimate their respective proportions in each mixed pixel of the acquired image. This task is usually referred to as spectral mixture analysis or spectral unmixing (SU). SU aims at decomposing the measured pixel spectrum into a collection of constituent spectra, called endmembers, and a set of corresponding fractions (abundances) that indicate the proportion of each endmember present in the pixel. Similarly, when processing spectrum-images, microscopists usually try to map elemental, physical and chemical state information of a given material. This paper reports how a SU algorithm dedicated to remote sensing hyperspectral images can be successfully applied to analyze spectrum-image resulting from electron energy-loss spectroscopy (EELS). SU generally overcomes standard limitations inherent to other multivariate statistical analysis methods, such as principal component analysis (PCA) or independent component analysis (ICA), that have been previously used to analyze EELS maps. Indeed, ICA and PCA may perform poorly for linear spectral mixture analysis due to the strong dependence between the abundances of the different materials. One example is presented here to demonstrate the potential of this technique for EELS analysis. [Copyright &y& Elsevier]
- Published
- 2012
- Full Text
- View/download PDF
47. Segmentation of Skin Lesions in 2-D and 3-D Ultrasound Images Using a Spatially Coherent Generalized Rayleigh Mixture Model.
- Author
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Pereyra, Marcelo, Dobigeon, Nicolas, Batatia, Hadj, and Tourneret, Jean-Yves
- Subjects
- *
TISSUES , *SKIN disease diagnosis , *IMAGE segmentation , *ULTRASONIC imaging , *DISTRIBUTION (Probability theory) , *MARKOV chain Monte Carlo , *BAYESIAN analysis - Abstract
This paper addresses the problem of jointly estimating the statistical distribution and segmenting lesions in multiple-tissue high-frequency skin ultrasound images. The distribution of multiple-tissue images is modeled as a spatially coherent finite mixture of heavy-tailed Rayleigh distributions. Spatial coherence inherent to biological tissues is modeled by enforcing local dependence between the mixture components. An original Bayesian algorithm combined with a Markov chain Monte Carlo method is then proposed to jointly estimate the mixture parameters and a label-vector associating each voxel to a tissue. More precisely, a hybrid Metropolis-within-Gibbs sampler is used to draw samples that are asymptotically distributed according to the posterior distribution of the Bayesian model. The Bayesian estimators of the model parameters are then computed from the generated samples. Simulation results are conducted on synthetic data to illustrate the performance of the proposed estimation strategy. The method is then successfully applied to the segmentation of in vivo skin tumors in high-frequency 2-D and 3-D ultrasound images. [ABSTRACT FROM PUBLISHER]
- Published
- 2012
- Full Text
- View/download PDF
48. CS Decomposition Based Bayesian Subspace Estimation.
- Author
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Besson, Olivier, Dobigeon, Nicolas, and Tourneret, Jean-Yves
- Subjects
- *
ESTIMATION theory , *SUBSPACES (Mathematics) , *MATHEMATICAL decomposition , *COMPUTER simulation , *HYPERSPECTRAL imaging systems - Abstract
In numerous applications, it is required to estimate the principal subspace of the data, possibly from a very limited number of samples. Additionally, it often occurs that some rough knowledge about this subspace is available and could be used to improve subspace estimation accuracy in this case. This is the problem we address herein and, in order to solve it, a Bayesian approach is proposed. The main idea consists of using the CS decomposition of the semi-orthogonal matrix whose columns span the subspace of interest. This parametrization is intuitively appealing and allows for non informative prior distributions of the matrices involved in the CS decomposition and very mild assumptions about the angles between the actual subspace and the prior subspace. The posterior distributions are derived and a Gibbs sampling scheme is presented to obtain the minimum mean-square distance estimator of the subspace of interest. Numerical simulations and an application to real hyperspectral data assess the validity and the performances of the estimator. [ABSTRACT FROM PUBLISHER]
- Published
- 2012
- Full Text
- View/download PDF
49. Supervised Nonlinear Spectral Unmixing Using a Postnonlinear Mixing Model for Hyperspectral Imagery.
- Author
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Altmann, Yoann, Halimi, Abderrahim, Dobigeon, Nicolas, and Tourneret, Jean-Yves
- Subjects
HYPERSPECTRAL imaging systems ,BAYESIAN analysis ,POLYNOMIALS ,ARGON ,NONLINEAR statistical models ,COMPUTER simulation ,ALGORITHMS - Abstract
This paper presents a nonlinear mixing model for hyperspectral image unmixing. The proposed model assumes that the pixel reflectances are nonlinear functions of pure spectral components contaminated by an additive white Gaussian noise. These nonlinear functions are approximated using polynomial functions leading to a polynomial postnonlinear mixing model. A Bayesian algorithm and optimization methods are proposed to estimate the parameters involved in the model. The performance of the unmixing strategies is evaluated by simulations conducted on synthetic and real data. [ABSTRACT FROM AUTHOR]
- Published
- 2012
- Full Text
- View/download PDF
50. Blind Deconvolution of Sparse Pulse Sequences Under a Minimum Distance Constraint: A Partially Collapsed Gibbs Sampler Method.
- Author
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Kail, Georg, Tourneret, Jean-Yves, Hlawatsch, Franz, and Dobigeon, Nicolas
- Subjects
DIAGNOSTIC imaging ,SEISMOLOGY ,BAYESIAN analysis ,DECONVOLUTION (Mathematics) ,MARKOV chain Monte Carlo - Abstract
For blind deconvolution of an unknown sparse sequence convolved with an unknown pulse, a powerful Bayesian method employs the Gibbs sampler in combination with a Bernoulli–Gaussian prior modeling sparsity. In this paper, we extend this method by introducing a minimum distance constraint for the pulses in the sequence. This is physically relevant in applications including layer detection, medical imaging, seismology, and multipath parameter estimation. We propose a Bayesian method for blind deconvolution that is based on a modified Bernoulli–Gaussian prior including a minimum distance constraint factor. The core of our method is a partially collapsed Gibbs sampler (PCGS) that tolerates and even exploits the strong local dependencies introduced by the minimum distance constraint. Simulation results demonstrate significant performance gains compared to a recently proposed PCGS. The main advantages of the minimum distance constraint are a substantial reduction of computational complexity and of the number of spurious components in the deconvolution result. [ABSTRACT FROM AUTHOR]
- Published
- 2012
- Full Text
- View/download PDF
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