620 results
Search Results
2. Paper-and-Glue Unit Cell Models.
- Author
-
Birk, James P. and Yezierski, Ellen J.
- Abstract
Recommends the use of origami to construct models of unit cells and crystalline structures. Provides templates and suggestions for use with students. (DDR)
- Published
- 2003
3. Contribution of Hydrogen Bonds to Paper Strength Properties.
- Author
-
Przybysz, Piotr, Dubowik, Marcin, Kucner, Marta Anna, Przybysz, Kazimierz, and Przybysz Buzała, Kamila
- Subjects
PAPER analysis ,HYDROGEN bonding ,PAPER pulp ,DIPOLE moments ,BUTANOL - Abstract
The objective of this work was to investigate the influence of hydrogen bonds between fibres on static and dynamic strength properties of paper. A commercial bleached pinewood kraft pulp was soaked in water, refined in a PFI, and used to form paper webs in different solvents, such as water, methanol, ethanol, n-propanol and n-butanol, to determine the effect of their dipole moment on static and dynamic strength properties of resulting paper sheets. Paper which was formed in water, being the solvent of the highest dipole moment among the tested ones, showed the highest breaking length and tear resistance. When paper webs were formed in n-butanol, which was the least polar among the solvents, these parameters were reduced by around 75%. These results provide evidence of the importance of water in paper web formation and strong impact of hydrogen bonds between fibres on strength properties of paper. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
4. Resource Paper: Entropy and Rubbery Elasticity.
- Author
-
Nash, Leonard K.
- Abstract
The chemical system of rubbery elasticity is presented. Several references are given from which to extract experiments and problems for students. (SA)
- Published
- 1979
5. Resource Paper: Organosilicon Chemistry, Part I.
- Author
-
West, Robert and Barton, Thomas J.
- Abstract
Outlined are recent developments in the field of organosilicon chemistry. Discussed are processes for synthesizing organosilanes, chemical bonding in silicon compounds, silicone polymers, and catenated polysilanes. (CS)
- Published
- 1980
6. Characterization of a new composite membrane for point of need paper-based micro-scale microbial fuel cell analytical devices.
- Author
-
González-Pabón, María Jesús, Figueredo, Federico, Martínez-Casillas, Diana C., and Cortón, Eduardo
- Subjects
- *
MICROBIAL fuel cells , *PHYSICAL & theoretical chemistry , *PHYSICAL sciences , *NUCLEAR physics , *LOW-income countries , *TOXICITY testing , *WASTEWATER treatment - Abstract
Microbial fuel cells (MFCs) can evolve in a viable technology if environmentally sound materials are developed and became available at low cost for these devices. This is especially important not only for the designing of large wastewater treatment systems, but also for the fabrication of low-cost, single-use devices. In this work we synthesized membranes by a simple procedure involving easily-biodegradable and economic materials such as poly (vinyl alcohol) (PVA), chitosan (CS) and the composite PVA:CS. Membranes were chemical and physically characterized and compared to Nafion®. Performance was studied using the membrane as separator in a typical H-Type MFCs showing that PVA:CS membrane outperform Nafion® 4 times (power production) while being 75 times more economic. We found that performance in MFC depends over interactions among several membrane characteristics such as oxygen permeability and ion conductivity. Moreover, we design a paper-based micro-scale MFC, which was used as a toxicity assay using 16 μL samples containing formaldehyde as a model toxicant. The PVA:CS membrane presented here can offer low environmental impact and become a very interesting option for point of need single-use analytical devices, especially in low-income countries where burning is used as disposal method, and toxic fluoride fumes (from Nafion®) can be released to the environment. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
7. Identifying Peirce's "Most Lucid and Interesting Paper"
- Author
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Ketner, Kenneth Laine
- Published
- 1987
8. FT-IR measurement on the damage of Japanese paper induced by PIXE analysis.
- Author
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Oguri, Y., Hasegawa, J., Fukuda, H., and Hagura, N.
- Subjects
- *
FOURIER transform infrared spectroscopy , *PROTONS , *RADIATION , *HEMP , *IRRADIATION - Abstract
Analysis of cultural heritage samples by PIXE involves the risk of damaging precious samples due to MeV-proton irradiation. To investigate appropriate methods to detect invisible damage due to PIXE analysis, we analyzed the change in chemical bonding of the sample surface subjected to PIXE and RBS measurement by Fourier Transform InfraRed spectroscopy (FT-IR). We used Japanese hemp paper as a simulated cultural property sample. The proton irradiation for the PIXE/RBS measurement was performed in a vacuum with an incident beam energy of 2.5 MeV, a beam current of 1 nA, and an irradiation time up to 10 min. The corresponding beam flux and fluence were 0.06 nA/mm2 and 4 μ Coulomb/cm2, respectively. When the irradiation time was 10 min, the absorbed dose was 480 kGy on the sample surface. We identified neither change of elemental composition nor visible change such as discoloration due to irradiation. However, we found changes in peak heights in the measured FT-IR spectra, which suggest the destruction of chemical bonds such as O–H and C–O due to proton-induced radiation damage. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
9. Chemically Bonded Stationary Phases that Use Synthetic Hosts Containing Aromatic Binding Clefts: HPLC Analysis of Nitro-Substituted Polycyclic Aromatic Hydrocarbons
- Author
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Zimmerman, Steven C., Saionz, Kurt W., and Zeng, Zijian
- Published
- 1993
10. Metal Ions in Unusual Valency States.
- Author
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Sellers, Robin M.
- Abstract
Discusses reactivity of metal ions with the primary products of water radiolysis, hyper-reduced metal ions, zero-valent metal ions, unstable divalent ions from the reduction of bivalent ions, hyper-oxidized metal ions, and metal complexes. (CS)
- Published
- 1981
11. Electron Spin Resonance of Radiation Produced Free Radicals.
- Author
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Sevilla, Michael D.
- Abstract
Discusses and simplifies the theory behind Electron Spin Resonance (ESR). Describes applications to radiation chemistry. (CS)
- Published
- 1981
12. Some Developments in the Stereochemistry of Coordination Compounds in the Last Fifty Years.
- Author
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Bailar, John C.
- Abstract
Describes developments in the stereochemistry of coordination compounds. Includes chemical structures and chemical reactions of selected compounds. (JN)
- Published
- 1981
13. Physical Insights on the Ambiguous Metal–Graphene Interface and Proposal for Improved Contact Resistance.
- Author
-
Ghatge, Mayur and Shrivastava, Mayank
- Subjects
METAL-organic frameworks ,GRAPHENE ,INTERFACES (Physical sciences) ,DENSITY functional theory ,GREEN'S functions - Abstract
The ambiguous behavior of metal–graphene interface has been addressed in this paper using density functional theory and nonequilibrium Green’s function formalism. For the first time, the fundamental chemistry of metal–graphene interface, in particular role of sp-hybridized and sp2-hybridized carbon atoms, has been emphasized and discussed in detail in this paper. It was discovered that the sp-hybridized sites at the edge of a graphene monolayer contribute to 40% of current conduction when compared with sp2-hybridized atom sites in the graphene–metal overlap region. Moreover, we highlighted the insignificance of an additional metal layer, i.e., sandwiched contact, due to lacking sp-hybridized carbon sites. A fundamental way of defining the contact resistance, while keeping chemical bonding in mind, has been proposed. The bonding insight has been further used to propose the novel ways of interfacing metal with graphene, which results in a 40% reduction in contact resistance. [ABSTRACT FROM PUBLISHER]
- Published
- 2015
- Full Text
- View/download PDF
14. Hasok Chang on the nature of acids.
- Author
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Scerri, Eric R.
- Subjects
STABILITY constants ,LEWIS acidity ,LEWIS acids ,ACIDITY function ,ACIDITY - Abstract
For a period of several years the philosopher of science Hasok Chang has promoted various inter-related views including pluralism, pragmatism, and an associated view of natural kinds. He has also argued for what he calls the persistence of everyday terms in the scientific view. Chang claims that terms like phlogiston were never truly abandoned but became transformed into different concepts that remain useful. On the other hand, Chang argues that some scientific terms such as acidity have suffered a form of "rupture", especially in the case of the modern Lewis definition of acids. Chang also complains that the degree of acidity of a Lewis acid cannot be measured using a pH meter and seems to regard this as a serious problem. The present paper examines some of these views, especially what Chang claims to be a rupture in the definition of acidity. It is suggested that there has been no such rupture but a genuine generalization, on moving from the Brønsted-Lowry theory to the Lewis theory of acidity. It will be shown how the quantification and measurement of Lewis acidity can easily be realized through the use of equilibrium theory and the use of stability constants. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
- View/download PDF
15. Contemporary History Series: Quantum Mechanics and Chemical Bonding in Inorganic Complexes: II. Valency and Inorganic Metal Complexes.
- Author
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Ballhausen, C. J.
- Abstract
This paper in the history of chemistry series focuses on the work of Pauling and others on the quantum mechanics of inorganic metal complexes. (BB)
- Published
- 1979
16. Atomism from Newton to Dalton.
- Author
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Schofield, Robert E.
- Abstract
Indicates that although Newton's achievements were rooted in an atomistic theory of matter resembling aspects of modern nuclear physics, Dalton developed his chemical atomism on the basis of the character of the gross behavior of substances rather than their particulate nature. (Author/SK)
- Published
- 1981
17. Carrageenan as a dry strength additive for papermaking.
- Author
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Liu, Zhenhua, Li, Xinping, and Xie, Wei
- Subjects
CARRAGEENANS ,RED algae ,PECTINS ,CALCIUM carbonate ,ADDITIVES - Abstract
Carrageenans are commercially important sulfated gums found in various species of red seaweeds (Rhodophyta), wherein they serve a structural function similar to that of pectins in land plants. In this study, carrageenan was used independently or in combination with cationic polyacrylamide (CPAM) and/or Al
2 (SO4 )3 to explore its application as a dry strength additive in papermaking. Strength index determination, ash content detection, FTIR characterization and SEM observation were performed on prepared handsheets. The results showed that with 0.6% Al2 (SO4 )3 and 0.2% carrageenan as additives, the tensile index increased by 13.53% and precipitated calcium carbonate (PCC) retention increased by 57.06%. With 0.6% Al2 (SO4 )3 , 0.2% carrageenan and 0.03% CPAM as additives, PCC retention increased by 121% while the tensile index did not fall compared to handsheets without additives, indicating that carrageenan could enhance the strength of handsheets and be used as an anionic dry strength agent. [ABSTRACT FROM AUTHOR]- Published
- 2017
- Full Text
- View/download PDF
18. Chemical bonding in multiple encapsulation geometry of Bi2Se3-based conversion-alloying anode materials for superior sodium-ion storage
- Author
-
Chong, Shaokun, Yuan, Lingling, Qiao, Shuangyan, Ma, Meng, Li, Ting, Huang, Xiang Long, Zhou, Qianwen, Wang, Yikun, and Huang, Wei
- Published
- 2023
- Full Text
- View/download PDF
19. How We Teach Molecular Structure to Freshmen.
- Author
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Hurst, Michael O.
- Abstract
Currently molecular structure is taught in general chemistry using three theories, this being based more on historical development rather than logical pedagogy. Electronegativity is taught with a confusing mixture of definitions that do not correspond to modern practice. Valence bond theory and VSEPR are used together in a way that often confuses students about the difference between the different theories. (Author/MM)
- Published
- 2002
20. Understanding the Particulate Nature of Matter.
- Author
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Gabel, Dorothy L.
- Abstract
Cites studies related to students' misconceptions about the particulate nature of matter. Stresses that a good understanding of these concepts is fundamental to the study of chemistry itself. Reports on a study of preservice elementary teachers views of the particulate nature of matter before instruction on the topic. (TW)
- Published
- 1987
21. Prospects and Retrospects in Chemical Education.
- Author
-
Pauling, Linus
- Abstract
Presented are views on prospects and retrospects in chemical education. The teaching of elementary chemistry is also discussed. (HM)
- Published
- 1980
22. Thermal and sound insulation properties of recycled cotton/polyester chemical bonded nonwovens.
- Author
-
Sakthivel, Santhanam, Senthil Kumar, Selvaraj, Mekonnen, Seblework, and Solomon, Eshetu
- Subjects
SOUNDPROOFING ,THERMAL insulation ,CHEMICAL bonds ,ABSORPTION of sound ,POLYESTERS ,POLYESTER fibers ,POLYETHYLENE terephthalate - Abstract
This research paper reports a study on thermal and sound insulation samples developed from recycled cotton/polyester (recycled cotton/PET) for construction industry applications. The waste recycled cotton and polyester fiber is a potential source of raw material that can be considered for thermal and sound insulation applications, but its quantities are limited. While the quantities are limited, waste recycled cotton fiber was mixed with recycled/PET fiber in 50/50 proportions in the form of two-layer nonwoven mats with a chemical bonding method. The samples such as cotton (color and white), polyester (color and white), and cotton-polyester blend (color and white) were prepared. All the samples were tested for thermal insulation, sound absorption, moisture absorption, and fiber properties as per the ASTM standard. Also, behaviors of six recycled cotton/polyester nonwoven samples under high humidity conditions were evaluated. The sound absorption coefficients were measured according to ASTM E 1050 by an impedance tube method, the sound absorption coefficient over six frequencies 125, 250, 500, 1000, 2000, and 4000 Hz were calculated. The result revealed that nonwoven mats that are prepared from recycled/PET/cotton waste have confirmed more than 70% of the sound absorption coefficient and the recycled nonwoven mats provided the best insulation, sound absorption, moisture absorption, and fiber properties. The recycled waste cotton/ polyester nonwoven mats have adequate moisture resistance at high humidity conditions without affecting the insulation and sound-absorbing properties. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
23. Schottky barrier heights and mechanism of charge transfer at metal-Bi2OS2 interfaces
- Author
-
Zhang, Xiaodong, Feng, Liping, Zhong, Shichen, Ye, Yuanming, Pan, Haixi, Liu, Pengfei, Zheng, Xiaoqi, Li, Huanyong, Qu, Mingyang, and Wang, Xitong
- Published
- 2023
- Full Text
- View/download PDF
24. Thermal and sound insulation properties of recycled cotton/polyester chemical bonded nonwovens.
- Author
-
Sakthivel, Santhanam, Kumar, Selvaraj Senthil, Mekonnen, Seblework, and Solomon, Eshetu
- Subjects
SOUNDPROOFING ,THERMAL insulation ,NONWOVEN textiles ,ABSORPTION of sound ,POLYESTERS ,POLYESTER fibers ,POLYETHYLENE terephthalate - Abstract
This research paper reports a study on thermal and sound insulation samples developed from recycled cotton/polyester (recycled cotton/PET) for construction industry applications. The waste recycled cotton and polyester fiber is a potential source of raw material that can be considered for thermal and sound insulation applications, but its quantities are limited. While the quantities are limited, waste recycled cotton fiber was mixed with recycled/PET fiber in 50/50 proportions in the form of two-layer nonwoven mats with a chemical bonding method. The samples such as cotton (color and white), polyester (color and white), and cotton-polyester blend (color and white) were prepared. All the samples were tested for thermal insulation, sound absorption, moisture absorption, and fiber properties as per the ASTM standard. Also, behaviors of six recycled cotton/polyester nonwoven samples under high humidity conditions were evaluated. The sound absorption coefficients were measured according to ASTM E 1050 by an impedance tube method, the sound absorption coefficient over six frequencies 125, 250, 500, 1000, 2000, and 4000 Hz were calculated. The result revealed that nonwoven mats that are prepared from recycled/PET/cotton waste have confirmed more than 70% of the sound absorption coefficient and the recycled nonwoven mats provided the best insulation, sound absorption, moisture absorption, and fiber properties. The recycled waste cotton/polyester nonwoven mats have adequate moisture resistance at high humidity conditions without affecting the insulation and sound-absorbing properties. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
25. Nine questions on energy decomposition analysis.
- Author
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Andrés, Juan, Ayers, Paul W., Boto, Roberto A., Carbó‐Dorca, Ramon, Chermette, Henry, Cioslowski, Jerzy, Contreras‐García, Julia, Cooper, David L., Frenking, Gernot, Gatti, Carlo, Heidar‐Zadeh, Farnaz, Joubert, Laurent, Martín Pendás, Ángel, Matito, Eduard, Mayer, István, Misquitta, Alston J., Mo, Yirong, Pilmé, Julien, Popelier, Paul L. A., and Rahm, Martin
- Subjects
CHEMICAL energy ,SOCIAL influence - Abstract
The paper collects the answers of the authors to the following questions:Is the lack of precision in the definition of many chemical concepts one of the reasons for the coexistence of many partition schemes?Does the adoption of a given partition scheme imply a set of more precise definitions of the underlying chemical concepts?How can one use the results of a partition scheme to improve the clarity of definitions of concepts?Are partition schemes subject to scientific Darwinism? If so, what is the influence of a community's sociological pressure in the "natural selection" process?To what extent does/can/should investigated systems influence the choice of a particular partition scheme?Do we need more focused chemical validation of Energy Decomposition Analysis (EDA) methodology and descriptors/terms in general?Is there any interest in developing common benchmarks and test sets for cross‐validation of methods?Is it possible to contemplate a unified partition scheme (let us call it the "standard model" of partitioning), that is proper for all applications in chemistry, in the foreseeable future or even in principle?In the end, science is about experiments and the real world. Can one, therefore, use any experiment or experimental data be used to favor one partition scheme over another? © 2019 Wiley Periodicals, Inc. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
26. Inorganic Chemistry from the Perspective of an Industrial Chemist.
- Author
-
Laudise, R. A.
- Abstract
Presents a very brief description of solid state chemistry, its industrial applications, and rationale for its inclusion in the inorganic chemistry curriculum. The topic is intellectually challenging, economically useful and, in the view of the author, fun. (Author/JN)
- Published
- 1980
27. A Systematic Analysis of the Structures of Heterologously Expressed Proteins and Those from Their Native Hosts in the RCSB PDB Archive.
- Author
-
Zhou, Ren-Bin, Lu, Hui-Meng, Liu, Jie, Shi, Jian-Yu, Zhu, Jing, Lu, Qin-Qin, and Yin, Da-Chuan
- Subjects
PROTEIN expression ,HOSTS (Biology) ,RECOMBINANT proteins ,PROTEIN structure ,COMBINATORICS - Abstract
Recombinant expression of proteins has become an indispensable tool in modern day research. The large yields of recombinantly expressed proteins accelerate the structural and functional characterization of proteins. Nevertheless, there are literature reported that the recombinant proteins show some differences in structure and function as compared with the native ones. Now there have been more than 100,000 structures (from both recombinant and native sources) publicly available in the Protein Data Bank (PDB) archive, which makes it possible to investigate if there exist any proteins in the RCSB PDB archive that have identical sequence but have some difference in structures. In this paper, we present the results of a systematic comparative study of the 3D structures of identical naturally purified versus recombinantly expressed proteins. The structural data and sequence information of the proteins were mined from the RCSB PDB archive. The combinatorial extension (CE), FATCAT-flexible and TM-Align methods were employed to align the protein structures. The root-mean-square distance (RMSD), TM-score, P-value, Z-score, secondary structural elements and hydrogen bonds were used to assess the structure similarity. A thorough analysis of the PDB archive generated five-hundred-seventeen pairs of native and recombinant proteins that have identical sequence. There were no pairs of proteins that had the same sequence and significantly different structural fold, which support the hypothesis that expression in a heterologous host usually could fold correctly into their native forms. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
28. Theoretical Prediction of the Smallest Sized Tricyclic-Boron Oxide B6O62+
- Author
-
Tian, Wen-Juan, Wang, Jing-Jing, and Chen, Hui-Li
- Published
- 2024
- Full Text
- View/download PDF
29. Structural analysis of the recognition of the -35 promoter element by SigW from Bacillus subtilis.
- Author
-
Kwon, Eunju, Devkota, Shankar Raj, Pathak, Deepak, Dahal, Pawan, and Kim, Dong Young
- Subjects
RNA polymerases ,BACILLUS subtilis ,PHYSICAL & theoretical chemistry ,SOLID state physics ,HYDROGEN bonding ,PROMOTERS (Genetics) - Abstract
Sigma factors are key proteins that mediate the recruitment of RNA polymerase to the promoter regions of genes, for the initiation of bacterial transcription. Multiple sigma factors in a bacterium selectively recognize their cognate promoter sequences, thereby inducing the expression of their own regulons. In this paper, we report the crystal structure of the σ4 domain of Bacillus subtilis SigW bound to the -35 promoter element. Purine-specific hydrogen bonds of the -35 promoter element with the recognition helix α9 of the σ4 domain occurs at three nucleotides of the consensus sequence (G
-35 , A-34 , and G’-31 in G-35 A-34 A-33 A-32 C-31 C-30 T-29 ). The hydrogen bonds of the backbone with the α7 and α8 of the σ4 domain occurs at G’-30 . These results elucidate the structural basis of the selective recognition of the promoter by SigW. In addition, comparison of SigW structures complexed with the -35 promoter element or with anti-sigma RsiW reveals that DNA recognition and anti-sigma factor binding of SigW are mutually exclusive. [ABSTRACT FROM AUTHOR]- Published
- 2019
- Full Text
- View/download PDF
30. Transient crosslinking kinetics optimize gene cluster interactions.
- Author
-
Walker, Benjamin, Taylor, Dane, Lawrimore, Josh, Hult, Caitlin, Adalsteinsson, David, Bloom, Kerry, and Forest, M. Gregory
- Subjects
GENE clusters ,CHROMOSOME structure ,COMPUTATIONAL biology ,RIBOSOMAL DNA - Abstract
Our understanding of how chromosomes structurally organize and dynamically interact has been revolutionized through the lens of long-chain polymer physics. Major protein contributors to chromosome structure and dynamics are condensin and cohesin that stochastically generate loops within and between chains, and entrap proximal strands of sister chromatids. In this paper, we explore the ability of transient, protein-mediated, gene-gene crosslinks to induce clusters of genes, thereby dynamic architecture, within the highly repeated ribosomal DNA that comprises the nucleolus of budding yeast. We implement three approaches: live cell microscopy; computational modeling of the full genome during G1 in budding yeast, exploring four decades of timescales for transient crosslinks between 5kbp domains (genes) in the nucleolus on Chromosome XII; and, temporal network models with automated community (cluster) detection algorithms applied to the full range of 4D modeling datasets. The data analysis tools detect and track gene clusters, their size, number, persistence time, and their plasticity (deformation). Of biological significance, our analysis reveals an optimal mean crosslink lifetime that promotes pairwise and cluster gene interactions through “flexible” clustering. In this state, large gene clusters self-assemble yet frequently interact (merge and separate), marked by gene exchanges between clusters, which in turn maximizes global gene interactions in the nucleolus. This regime stands between two limiting cases each with far less global gene interactions: with shorter crosslink lifetimes, “rigid” clustering emerges with clusters that interact infrequently; with longer crosslink lifetimes, there is a dissolution of clusters. These observations are compared with imaging experiments on a normal yeast strain and two condensin-modified mutant cell strains. We apply the same image analysis pipeline to the experimental and simulated datasets, providing support for the modeling predictions. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
31. Inorganic Molecular Electride Mg4O3: Structure, Bonding, and Nonlinear Optical Properties.
- Author
-
Kulichenko, Maksim, Fedik, Nikita, Bozhenko, Konstatin V., and Boldyrev, Alexander I.
- Subjects
MATERIALS science ,OPTICAL properties ,CRYSTAL defects ,EXCESS electrons ,ELECTRON pairs ,HYDROGEN bonding - Abstract
Growing demands of material science and, in particular, in the field of nonlinear optics (NLO) encourage us to look for stable highly polarizable molecules with excess diffuse electrons. An unusual class of compounds called electrides comply with these requirements. Many attempts have been made, yet only few electrides have been synthesized as solids and none of them as molecular species. In this paper, a new theoretically designed molecular species with electride characteristics is reported. The idea of this molecular electride comes from the formation of electride‐like features in the MgO crystal with defect F‐centers. The geometry of the investigated molecule can be described as a Mg4O4 cube with one oxygen atom removed. In Mg4O3, two 3s electrons are pushed out from the inner area of the molecule forming a diffuse electride multicentered bond. Our calculations show that this electride‐like cluster possesses a noticeably large first hyperpolarizability β=5733 au. At the same time, a complete cube Mg4O4 and Mg4O32+ without electride electron pair have much smaller β: 0 au and 741 au, respectively. This fact indicates the decisive role of the electride electron pair in NLO properties. Additionally, vertical detachment energies of isomers (VDE), excitation energies ΔE, polarizabilities α, and IR spectra were calculated. These properties, including β, are supposed to be observable experimentally and can serve as indirect evidence of the stable molecular electride formation. Elusive electride: Many attempts have been made, yet only few electrides have been synthesized as solids and none of them as molecular species. A theoretically designed molecular species with electride characteristics is reported based on the idea of formation of electride‐like features in MgO crystals with defect F‐centers. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
32. Predicting the mechanism and rate of H-NS binding to AT-rich DNA.
- Author
-
Riccardi, Enrico, van Mastbergen, Eva C., Navarre, William Wiley, and Vreede, Jocelyne
- Subjects
BACTERIA ,ARGININE ,DNA ,BIOCHEMISTRY ,PROTEINS - Abstract
Bacteria contain several nucleoid-associated proteins that organize their genomic DNA into the nucleoid by bending, wrapping or bridging DNA. The Histone-like Nucleoid Structuring protein H-NS found in many Gram-negative bacteria is a DNA bridging protein and can structure DNA by binding to two separate DNA duplexes or to adjacent sites on the same duplex, depending on external conditions. Several nucleotide sequences have been identified to which H-NS binds with high affinity, indicating H-NS prefers AT-rich DNA. To date, highly detailed structural information of the H-NS DNA complex remains elusive. Molecular simulation can complement experiments by modelling structures and their time evolution in atomistic detail. In this paper we report an exploration of the different binding modes of H-NS to a high affinity nucleotide sequence and an estimate of the associated rate constant. By means of molecular dynamics simulations, we identified three types of binding for H-NS to AT-rich DNA. To further sample the transitions between these binding modes, we performed Replica Exchange Transition Interface Sampling, providing predictions of the mechanism and rate constant of H-NS binding to DNA. H-NS interacts with the DNA through a conserved QGR motif, aided by a conserved arginine at position 93. The QGR motif interacts first with phosphate groups, followed by the formation of hydrogen bonds between acceptors in the DNA minor groove and the sidechains of either Q112 or R114. After R114 inserts into the minor groove, the rest of the QGR motif follows. Full insertion of the QGR motif in the minor groove is stable over several tens of nanoseconds, and involves hydrogen bonds between the bases and both backbone and sidechains of the QGR motif. The rate constant for the process of H-NS binding to AT-rich DNA resulting in full insertion of the QGR motif is in the order of 10
6 M−1 s−1 , which is rate limiting compared to the non-specific association of H-NS to the DNA backbone at a rate of 108 M−1 s−1 . [ABSTRACT FROM AUTHOR]- Published
- 2019
- Full Text
- View/download PDF
33. Atoms in molecules as non-overlapping, bounded, space-filling open quantum systems
- Author
-
Bader, Richard F. W. and Matta, Chérif F.
- Published
- 2013
- Full Text
- View/download PDF
34. Structural organization and energy storage in crosslinked actin assemblies.
- Author
-
Ma, Rui and Berro, Julien
- Subjects
ACTIN ,CLATHRIN ,ENDOCYTOSIS ,FIBERS ,FIMBRIN ,POLYMERIZATION - Abstract
During clathrin-mediated endocytosis in yeast cells, short actin filaments (< 200nm) and crosslinking protein fimbrin assemble to drive the internalization of the plasma membrane. However, the organization of the actin meshwork during endocytosis remains largely unknown. In addition, only a small fraction of the force necessary to elongate and pinch off vesicles can be accounted for by actin polymerization alone. In this paper, we used mathematical modeling to study the self-organization of rigid actin filaments in the presence of elastic crosslinkers in conditions relevant to endocytosis. We found that actin filaments condense into either a disordered meshwork or an ordered bundle depending on filament length and the mechanical and kinetic properties of the crosslinkers. Our simulations also demonstrated that these nanometer-scale actin structures can store a large amount of elastic energy within the crosslinkers (up to 10k
B T per crosslinker). This conversion of binding energy into elastic energy is the consequence of geometric constraints created by the helical pitch of the actin filaments, which results in frustrated configurations of crosslinkers attached to filaments. We propose that this stored elastic energy can be used at a later time in the endocytic process. As a proof of principle, we presented a simple mechanism for sustained torque production by ordered detachment of crosslinkers from a pair of parallel filaments. [ABSTRACT FROM AUTHOR]- Published
- 2018
- Full Text
- View/download PDF
35. New insights on repellent recognition by Anopheles gambiae odorant-binding protein 1.
- Author
-
Tzotzos, George, Iley, Jim N., and Moore, Elaine A.
- Subjects
CARRIER proteins ,INSECTS ,ANOPHELES gambiae ,INSECT baits & repellents ,OLFACTORY nerve ,ODORANT-binding proteins - Abstract
It is generally recognized that insect odorant binding proteins (OBPs) mediate the solubilisation and transport of hydrophobic odorant molecules and contribute to the sensitivity of the insect olfactory system. However, the exact mechanism by which OBPs deliver odorants to olfactory receptors and their role, if any, as selectivity filters for specific odorants, are still a matter of debate. In the case of Anopheles gambiae, recent studies indicate that ligand discrimination is effected through the formation of heterodimers such as AgamOBP1 and AgamOBP4 (odorant binding proteins 1 and 4 from Anopheles gambiae). Furthermore, AgamOBPs have been reported to be promiscuous in binding more than one ligand simultaneously and repellents such as DEET (N,N-diethyl-3-toluamide) and 6-MH (6-methyl-5-hepten-2-one) interact directly with mosquito OBPs and/or compete for the binding of attractive odorants thus disrupting OBP heterodimerisation. In this paper, we propose mechanisms of action of DEET and 6-MH. We also predict that ligand binding can occur in several locations of AgamOBP1 with partial occupancies and propose structural features appropriate for repellent pharmacophores. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
36. Exploring the behaviour of water in glycerol solutions by using delayed luminescence.
- Author
-
Grasso, Rosaria, Musumeci, Francesco, Gulino, Marisa, and Scordino, Agata
- Subjects
GLYCERIN analysis ,LUMINESCENCE ,CRYOPRESERVATION of organs, tissues, etc. ,NEUTRON diffraction ,HYDROGEN bonding - Abstract
The crucial role of water in the engine of life have encouraged many researchers in studying, both theoretically and experimentally, the possible “structure” of water. Many properties of water have been related to the interplay between two distinct and interconverting structural species, namely the low-density water (LDW) and the high-density water (HDW). Supported by the results obtained with other aqueous solutions, this paper deals with the possibility of using the ultra-weak delayed luminescence (DL) to investigate water structuring in a mixture with glycerol, characterized only by hydrogen bonds between the various molecules. Spectral and temporal characteristics of DL decays give information on the two components of the mixture, by evidencing the contribution of water at glycerol concentrations close to the values used in cryopreservation. DL results have shown a correlation with LDW clusters size as determined by other researchers on the basis of neutron diffraction experiments and computational modelling, as reported in Literature. [ABSTRACT FROM AUTHOR]
- Published
- 2018
- Full Text
- View/download PDF
37. Two material removal modes in chemical mechanical polishing: mechanical plowing vs. chemical bonding.
- Author
-
Wu, Yuan, Jiang, Liang, Li, Wenhui, Zheng, Jiaxin, Chen, Yushan, and Qian, Linmao
- Subjects
CHEMICAL bonds ,ATOMIC force microscopy ,SURFACE roughness ,COPPER ,INTERFACIAL bonding - Abstract
With the rapid development of semiconductors, the number of materials needed to be polished sharply increases. The material properties vary significantly, posing challenges to chemical mechanical polishing (CMP). Accordingly, the study aimed to classify the material removal mechanism. Based on the CMP and atomic force microscopy results, the six representative metals can be preliminarily classified into two groups, presumably due to different material removal modes. From the tribology perspective, the first group of Cu, Co, and Ni may mainly rely on the mechanical plowing effect. After adding H
2 O2 , corrosion can be first enhanced and then suppressed, affecting the surface mechanical strength. Consequently, the material removal rate (MRR) and the surface roughness increase and decrease. By comparison, the second group of Ta, Ru, and Ti may primarily depend on the chemical bonding effect. Adding H2 O2 can promote oxidation, increasing interfacial chemical bonds. Therefore, the MRR increases, and the surface roughness decreases and levels off. In addition, CMP can be regulated by tuning the synergistic effect of oxidation, complexation, and dissolution for mechanical plowing, while tuning the synergistic effect of oxidation and ionic strength for chemical bonding. The findings provide mechanistic insight into the material removal mechanism in CMP. [ABSTRACT FROM AUTHOR]- Published
- 2024
- Full Text
- View/download PDF
38. Chemical bonding dictates drastic critical temperature difference in two seemingly identical superconductors.
- Author
-
Lavroff, Robert H., Munarriz, Julen, Dickerson, Claire E., Munoz, Francisco, and Alexandrova, Anastassia N.
- Subjects
CHEMICAL bonds ,CRITICAL temperature ,SUPERCONDUCTORS ,ACOUSTIC phonons ,ELECTRON configuration - Abstract
Though YB6 and LaB6 share the same crystal structure, atomic valence electron configuration, and phonon modes, they exhibit drastically different phonon-mediated superconductivity. YB6 superconducts below 8.4 K, giving it the second-highest critical temperature of known borides, second only to MgB2. LaB6 does not superconduct until near-absolute zero temperatures (below 0.45 K), however. Though previous studies have quantified the canonical superconductivity descriptors of YB6's greater Fermi-level (Ef ) density of states and higher electron-phonon coupling (EPC), the root of this difference has not been assessed with full detail of the electronic structure. Through chemical bonding, we determine low-lying, unoccupied 4f atomic orbitals in lanthanum to be the key difference between these superconductors. These orbitals, which are not accessible in YB6, hybridize with π B-B bonds and bring this π-system lower in energy than the σ B-B bonds otherwise at Ef. This inversion of bands is crucial: the optical phonon modes we show responsible for superconductivity cause the σ-orbitals of YB6 to change drastically in overlap, but couple weakly to the π-orbitals of LaB6. These phonons in YB6 even access a crossing of electronic states, indicating strong EPC. No such crossing in LaB6 is observed. Finally, a supercell (the M k-point) is shown to undergo Peierls-like effects in YB6, introducing additional EPC from both softened acoustic phonons and the same electron-coupled optical modes as in the unit cell. Overall, we find that LaB6 and YB6 have fundamentally different mechanisms of superconductivity, despite their otherwise near-identity. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
39. Effect of bonding techniques on thermal insulation and biodegradation of banana fiber/recycled polyester nonwovens.
- Author
-
N, Muthukumar, G, Thilagavathi, and T, Kiruba
- Subjects
THERMAL insulation ,NONWOVEN textiles ,BIODEGRADATION ,POLYESTER fibers ,BANANAS ,THERMAL resistance - Abstract
In this research, the needle punched and chemical bonded nonwovens were developed by blending banana fiber and recycled polyester (r-PET) in three blend ratios (90% banana/10% r-PET, 70% banana/30% r-PET, 50% banana/50% r-PET). The developed nonwovens were characterized by thermal insulation and biodegradation properties. Results showed that all developed nonwovens have an excellent insulation performance; the thermal resistance value is in the range of 0.299 to 0.248 m
2 K/W. It was observed that nonwovens made from 90% banana/10% r-PET have better thermal insulation compared to other blend ratios in both techniques. It was also observed that the chemical bonded nonwovens had a 6.69% higher thermal resistance value compared to the needle punched nonwovens. A bi-layer hybrid structure made with chemical bonded nonwoven and needle punched nonwoven provided a thermal resistance value of 0.43 m2 K/W. The chemical bonded nonwovens showed lower biodegradation compared to needle punched nonwovens. [ABSTRACT FROM AUTHOR]- Published
- 2024
- Full Text
- View/download PDF
40. Disclosure of Ground‐State Zimmerman‐Möbius Aromaticity in the Radical Anion of [6]Helicene and Evidence for 4π Periodic Aromatic Ring Currents in a Molecular "Metallic" Möbius Strip.
- Author
-
Mauksch, Michael and Tsogoeva, Svetlana B.
- Subjects
RADICAL anions ,AROMATICITY ,POLYCYCLIC aromatic hydrocarbons ,PERICYCLIC reactions ,ELECTRON delocalization ,PHONONIC crystals - Abstract
In 1966, Zimmerman proposed a type of Möbius aromaticity that involves through‐space electron delocalization; it has since been widely applied to explain reactivity in pericyclic reactions, but is considered to be limited to transition‐state structures. Although the easily accessible hexahelicene radical anion has been known for more than half a century, it was overlooked that it exhibits a ground‐state minimum and robust Zimmerman‐Möbius aromaticity in its central noose‐like opening, becoming, hence, the oldest existing Möbius aromatic system and with smallest Möbius cycle known. Despite its overall aromatic stabilization energy of 13.6 kcal mol−1 (at B3LYP/6‐311+G**), the radical also features a strong, globally induced paramagnetic ring current along its outer edge. Exclusive global paramagnetic currents can also be found in other fully delocalized radical anions of 4N+2 π‐electron aromatic polycyclic benzenoid hydrocarbons (PAH), thus questioning the established magnetic criterion of antiaromaticity. As an example of a PAH with nontrivial topology, we studied a novel Möbius[16]cyclacene that has a non‐orientable surface manifold and a stable closed‐shell singlet ground state at several density functional theory levels. Its metallic monoanion radical (0.0095 eV band gap at HSE06/6‐31G* level) is also wave‐function stable and displays an unusual 4π‐periodic, magnetically induced ring current (reminiscent of the transformation behaviour of spinors under spatial rotation), thus indicating the existence of a new, Hückel‐rule‐evading type of aromaticity. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
41. Electronegativity Equalization with Pauling Units.
- Author
-
Bratsch, Steven G.
- Abstract
Discusses electronegativity equalization using Pauling units. Although Pauling has qualitatively defined electronegativity as the power of an atom in a molecule to attract electrons to itself, Pauling electronegativities are treated in this paper as prebonded, isolated-atom quantities. (JN)
- Published
- 1984
42. Grade-12 Students' Misconceptions of Covalent Bonding and Structure.
- Author
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Peterson, Raymond F. and Treagust, David F.
- Abstract
Describes a multiple choice, pencil and paper, diagnostic instrument used to measure student understanding of covalent bonding and structure concepts. Reports evidence of seven commonly held misconceptions. (MVL)
- Published
- 1989
43. Textbook Errors: 137. Physical and Chemical Properties and Bonding of Metallic Elements.
- Author
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Myers, R. Thomas
- Abstract
Focuses attention on the almost universal practice of discussing all metals as malleable. The author points out that some are brittle and then he presents the variation in chemical properties of metals. (SA)
- Published
- 1979
44. Fast exploration of an optimal path on the multidimensional free energy surface.
- Author
-
Chen, Changjun
- Subjects
FREE energy (Thermodynamics) ,ACTIVATION energy ,REACTION mechanisms (Chemistry) ,DEGREES of freedom ,INTERPOLATION algorithms - Abstract
In a reaction, determination of an optimal path with a high reaction rate (or a low free energy barrier) is important for the study of the reaction mechanism. This is a complicated problem that involves lots of degrees of freedom. For simple models, one can build an initial path in the collective variable space by the interpolation method first and then update the whole path constantly in the optimization. However, such interpolation method could be risky in the high dimensional space for large molecules. On the path, steric clashes between neighboring atoms could cause extremely high energy barriers and thus fail the optimization. Moreover, performing simulations for all the snapshots on the path is also time-consuming. In this paper, we build and optimize the path by a growing method on the free energy surface. The method grows a path from the reactant and extends its length in the collective variable space step by step. The growing direction is determined by both the free energy gradient at the end of the path and the direction vector pointing at the product. With fewer snapshots on the path, this strategy can let the path avoid the high energy states in the growing process and save the precious simulation time at each iteration step. Applications show that the presented method is efficient enough to produce optimal paths on either the two-dimensional or the twelve-dimensional free energy surfaces of different small molecules. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
45. Quo Vadis Quasicrystals?
- Author
-
Barber, Enrique Maciá
- Subjects
QUASICRYSTALS ,CRYSTAL structure ,PHOTONIC crystals ,CHEMICAL bonds ,OPTICAL devices - Abstract
This Special Issue aims at gaining a deeper understanding on the relationship between the underlying structural order and the resulting physical properties in aperiodic systems, including quasicrystalline and related complex metallic alloys, photonic quasicrystals, and other structures exhibiting long-range aperiodic order. This Special Issue contains 12 papers which highlight recent developments in quasiperiodic crystal structure, photonic quasicrystals and related optical devices, the intrinsic electrical, thermal, and mechanical properties of icosahedral and decagonal metallic alloys, and the nature of chemical bonding in intermetallic compounds, from a multidisciplinary perspective. In light of the results presented in the contributions collected in this Special Issue, we can confidently expect that new insights into the interdisciplinary science of quasicrystals will be gained in the years to come, providing a sharper picture of their structures and related physical properties, and spurring further progress in practical issues related to both materials engineering science and nanotechnology. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
46. Physical Properties of the NbC Carbide.
- Author
-
Di Vernieri Cuppari, Marcio Gustavo and Santos, Sydney Ferreira
- Subjects
TRANSITION metal carbides ,HARDNESS ,PHASE diagrams ,CRYSTAL structure ,THERMAL properties - Abstract
Transition metal carbides are interesting materials with a singular combination of properties, such as high melting points, high hardness, good transport properties and relatively low costs, which makes them excellent candidates for several technological applications. The possible applications of NbC carbide remained unexplored as it was in the past expensive and available in limited volumes. In order to guide investigations of the applicability of NbC, a deeper understanding of the physical properties of this carbide is fundamental. In this review paper, key physical properties of NbC are compiled with emphasis on its chemical bonding, a careful description of the C-Nb phase diagram, the phases formed and the crystal structures. Thermal properties are discussed and correlated with the intrinsic and extrinsic features of NbC. Finally, elastic properties are discussed. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
47. Analyzing cases of significant nondynamic correlation with DFT using the atomic populations of effectively localized electrons
- Author
-
Lewis, Conrad, Proynov, Emil, Yu, Jianguo, and Kong, Jing
- Published
- 2022
- Full Text
- View/download PDF
48. SiAlON composite films with strengthened chemical intermixing for wide infrared absorption band.
- Author
-
Jiang, Yuxin, Chen, Zhilin, Xiong, Hui, Zhang, Qiuju, Chen, Hao, Gao, Junhua, and Cao, Hongtao
- Subjects
- *
INFRARED absorption , *SIALON , *OPTICAL constants , *CHEMICAL bonds , *OPTICAL properties , *MAGNETRONS , *SILICON nitride - Abstract
[Display omitted] • Broadband absorption of SiAlON films caused by chemical intermixing. • One-step magnetron co-sputtering method for fabricating SiAlON films. • Alterable IR optical properties based upon tunable compositions. • Flexible optical constants/absorbing bands that enables IR absorbers optimization. Broadband infrared absorbers have been intensively developed in recent decades due to their wide range of applications. Current infrared absorbers usually adapt complicated photonic designs to meet increasing demands, since natural infrared material (e.g., dielectrics, polymers, and metals) can hardly realize broadband and spectrally selective absorption simultaneously. In this paper, a novel infrared absorbing composite SiAlON is proposed and successfully fabricated by co-sputtering Si 3 N 4 and AlN. Its wide-band absorption characteristics across through 8 to 16 μm can be tuned simply via adjusting its deposition conditions. The corresponding optical and composition analyses confirm that the broadband features with spectral selectivity are attributed to chemical composition control and the chemical bonding state tunability. This work extends the bandwidth and improves the absorbing flexibility of single material, making a step forward to develop broadband infrared absorbers with simpler structure. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
49. Geometries, Electronic Structures, Bonding Properties, and Stability Strategy of Endohedral Metallofullerenes TM@C 28 (TM = Sc − , Y − , La − , Ti, Zr, Hf, V + , Nb + , Ta +).
- Author
-
Liu, Dong, Shui, Yuan, and Yang, Tao
- Subjects
ELECTRONIC structure ,METALLOFULLERENES ,ORBITAL interaction ,MOLECULAR orbitals ,GEOMETRY ,TANTALUM - Abstract
We performed quantum chemical calculations on the geometries, electronic structures, bonding properties, and stability strategy of endohedral metallofullerenes TM@C
28 (TM = Sc− , Y− , La− , Ti, Zr, Hf, V+ , Nb+ , Ta+ ). Our calculations revealed that there are three different lowest-energy structures with C2v , C3v , and Td symmetries for TM@C28 . The HOMO–LUMO gap of all these structures ranges from 1.35 eV to 2.31 eV, in which [V@C28 ]+ has the lowest HOMO–LUMO gap of 1.35 eV. The molecular orbitals are mainly composed of fullerene cage orbitals and slightly encapsulated metal orbitals. The bonding analysis on the metal–cage interactions reveals they are dominated by the Coulomb term ΔEelstat and the orbital interaction term ΔEorb , in which the orbital interaction term ΔEorb contributes more than the Coulomb term ΔEelstat . The addition of one or two CF3 groups to [V@C28 ]+ could increase the HOMO–LUMO gap and further increase the stability of [V@C28 ]+ . [ABSTRACT FROM AUTHOR]- Published
- 2024
- Full Text
- View/download PDF
50. USO DE MECANISMO DINÂMICO E INTERATIVO NO ENSINO DE QUÍMICA: UM RELATO DE SALA DE AULA.
- Author
-
CAMELO, A. L. M., MAZZETTO, S. E., and VASCONCELOS, P. H. M.
- Abstract
Copyright of HOLOS is the property of Instituto Federal do Rio Grande do norte - IFRN and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2016
- Full Text
- View/download PDF
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