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With the rapid development of robotics and in-depth research of automatic navigation technology, mobile robots have been applied in a variety of fields. Map construction is one of the core research focuses of mobile robot development. In this paper, we propose an autonomous map calibration method using visible light positioning (VLP) landmarks and Simultaneous Localization and Mapping (SLAM). A layout map of the environment to be perceived is calibrated by a robot tracking at least two landmarks mounted in the venue. At the same time, the robot’s position on the occupancy grid map generated by SLAM is recorded. The two sequences of positions are synchronized by their time stamps and the occupancy grid map is saved as a sensor map. A map transformation method is then performed to align the orientation of the two maps and to calibrate the scale of the layout map to agree with that of the sensor map. After the calibration, the semantic information on the layout map remains and the accuracy is improved. Experiments are performed in the robot operating system (ROS) to verify the proposed map calibration method. We evaluate the performance on two layout maps: one with high accuracy and the other with rough accuracy of the structures and scale. The results show that the navigation accuracy is improved by 24.6 cm on the high-accuracy map and 22.6 cm on the rough-accuracy map, respectively.