77 results on '"Yangfan Xu"'
Search Results
2. Dynamic Joint Frequency Offset and Phase Noise Tracking by Number-Theoretic Net-Based Gaussian Particle Filter in Coherent Optical Systems
- Author
-
Xinwei Du, Yangfan Xu, Wei Huang, and Changyuan Yu
- Subjects
Modeling and Simulation ,Electrical and Electronic Engineering ,Computer Science Applications - Published
- 2022
3. Effects of different substrate addition on growth status of submerged plants and rhizosphere microorganisms in sediments
- Author
-
Yangfan Xu and Jianwei Zhao
- Abstract
Sediment is an important factor affecting the growth of aquatic plants. The effects of sediment substrate application on aquatic plants and rhizosphere microorganisms are poorly understood. In this study, we investigated the effects of four substrates (maifanite, vermiculite, ceramsite, and volcanic rock gravels) on the growth and rhizosphere microorganisms of Vallisneria natans (Lour.) Hara (V. natans) by Illumina high-throughput sequencing technology. The results showed that the maximum increase in plant height (20.5 cm) was observed in vermiculite group during the whole experiment period (day 1-40). The root activity of V. natans in the four treatment groups (34.78~85.28 U g-1) was higher than that in CK (28.48 U g-1). The maximum mean total chlorophyll content in maifanite group was 2.40 mg g-1, followed by vermiculite group (1.1 mg g-1). Catalase activity in leaves in all the treatment groups except maifanite group was significantly different during different periods (P
- Published
- 2023
4. A photo-assisted electrochemical-based demonstrator for green ammonia synthesis
- Author
-
Xiaolu Liu, Zhurui Shen, Xinyue Peng, Lu Tian, Ran Hao, Lu Wang, Yangfan Xu, Yuping Liu, Christos T. Maravelias, Wei Li, and Geoffrey A. Ozin
- Subjects
Fuel Technology ,Electrochemistry ,Energy Engineering and Power Technology ,Energy (miscellaneous) - Published
- 2022
5. The m6A reading protein YTHDF3 potentiates tumorigenicity of cancer stem-like cells in ocular melanoma through facilitating CTNNB1 translation
- Author
-
Yangfan Xu, Xiaoyu He, Shanzheng Wang, Baofa Sun, Ruobing Jia, Peiwei Chai, Fang Li, Ying Yang, Shengfang Ge, Renbing Jia, Yun-Gui Yang, and Xianqun Fan
- Subjects
Cancer Research ,Genetics ,Molecular Biology - Published
- 2022
6. Facile fabrication of CdSe/CuInS2 microflowers with efficient photocatalytic hydrogen production activity
- Author
-
Ying Wang, Jiaru Peng, Yangfan Xu, Ruiyang Zhao, Jishu Han, and Lei Wang
- Subjects
Fuel Technology ,Renewable Energy, Sustainability and the Environment ,Energy Engineering and Power Technology ,Condensed Matter Physics - Published
- 2022
7. Design and Identification of Lumped-Parameter Thermal Network Model for Permanent-Magnet Spherical Motor
- Author
-
Zehui Sun, Yangfan Xu, Qunjing Wang, Jiazi Xu, Guoli Li, and Yan Wen
- Published
- 2023
8. Effectiveness of manual therapy, computerised mobilisation plus home exercise, and home exercise only in treating work-related neck pain: study protocol for a randomised controlled trial
- Author
-
Weiming Wang, Chang Ji, Lars Louis Andersen, Yafei Wang, Yangyang Lin, Li Jiang, Shuwei Chen, Yangfan Xu, Ziping Zhang, Le Shi, and Yuling Wang
- Subjects
Rheumatology ,Orthopedics and Sports Medicine - Abstract
Abstract Background Work-related neck pain (WRNP) is a leading cause of disability and absenteeism. Patients with neck pain often have neck muscle tenderness and decreased cervical mobility, which are sometimes combined with psychosocial issues, such as pain catastrophising, thereby reducing their work ability. Whilst multidisciplinary treatments, including pharmacological interventions, manual therapy and specific neck exercises, have produced positive outcomes, effective personalised treatment modalities are still needed. Furthermore, manual therapies using the hands can bring fatigue to therapist. Occiflex is a computerised device that can provide personalised segmental joint mobilisation based on symptoms and injury of the patient and then provide a medium range of joint activities to improve range of cervical motion. This study aims to compare the effect of computerised mobilisation performed with Occiflex with that of traditional manual therapy on WRNP. Methods We will conduct a prospective randomised controlled trial including 150 patients with WRNP. These patients will be randomly assigned to one of three groups: (i) home exercise (TE), (ii) home exercise plus Occiflex therapy and (iii) home exercise plus manual therapy delivered by a physical therapist. Ten treatment sessions will be performed in four weeks. During the trial, these patients will receive only the assigned treatment and the standard patient education and will be asked not to use any analgesics unless strictly necessary. Assessments by trained evaluators will occur at baseline, week 4 and week 12. The primary outcome measures will include visual analogue scale (VAS) for pain and neck disability index (NDI) at each time point. Secondary outcome measures will include cervical range of motion (CROM), pressure pain threshold (PPT), global perceived effect (GPE) and sick leave. Group by time differences will be analysed using linear mixed models with repeated measures. Discussion This protocol describes the methods for a randomised controlled trial to compare the effectiveness of computerised versus manual mobilisation techniques in treating WRNP. The results will provide an alternative method (Occiflex) that is possibly effective for treating neck pain whilst minimising the manual work done by therapists. Trial registration The study protocol was retrospectively registered at http://www.chictr.org.cn (registration number: ChiCTR2100053076) on November 10, 2021.
- Published
- 2022
9. In Situ TEM Observation of Spinel-Structured ZnFe2O4 as a Low-Temperature CO2 Splitting Agent
- Author
-
Mengsha Li, Yangfan Xu, Chenyue Qiu, Stas Dogel, Hooman Hosseinkhannazer, Doug Perovic, Geoffrey A Ozin, and Jane Howe
- Subjects
Instrumentation - Published
- 2022
10. Reflection and application of the feedback model of Shiller
- Author
-
Yangfan Xu
- Abstract
Shiller has made a great contribution to behavior finance through his feedback model. To gain an understanding of the problems emerging from it, this paper summarizes the main ideas of the feedback model of Shiller (2003) and takes overall comments on the feedback model. And nobody has probed into the question that in what settings may feedback model apply more strongly. Therefore, this paper discusses and demonstrates this problem and gives more examples of the feedback model in reality which Shiller doesn’t mention in his paper.
- Published
- 2022
11. A small Rho GTPase OsRacB is required for pollen germination in rice
- Author
-
Wenguo Cai, Mingjiao Chen, Xiaofei Chen, Yangfan Xu, and Wanqi Liang
- Subjects
rho GTP-Binding Proteins ,Oryza sativa ,Mutant ,Arabidopsis ,Stamen ,food and beverages ,Oryza ,Cell Biology ,GTPase ,Biology ,medicine.disease_cause ,biology.organism_classification ,eye diseases ,Cell biology ,Germination ,Pollen ,otorhinolaryngologic diseases ,medicine ,Pollen tube ,Monomeric GTP-Binding Proteins ,Plant Proteins ,Developmental Biology - Abstract
Plant Rho small GTPases (Rop/Rac) are versatile molecular switches regulating many plant developmental processes. Particularly, their important functions in regulating pollen development have been demonstrated in Arabidopsis. A group of conserved Rop/Rac activators RopGEFs were recently reported to regulate rice (Oryza sativa) pollen tube germination, indicating that rice and Arabidopsis may have a conserved Rop/Rac mediated signaling pathway in regulating pollen tube growth. However, the Rop/Rac activated by the rice pollen specific RopGEFs remains to be identified. Here we demonstrated a Rop/Rac gene, OsRacB, co-expressed with the mature pollen expressed OsRopGEF2/3/6/8. The knockout mutants were normal in anther and pollen development but defective in the pollen grain germination, suggesting a specific and non-redundant role of OsRacB in the mature pollen. We further demonstrated that OsRacB is directly activated by the pollen specific expressing OsRopGEFs in vitro. Together with the previous study, we establish a RopGEF-Rop/Rac regulon which plays essential roles in rice pollen grain germination. Our data encourage further identification of the upstream and downstream players of RopGEF-Rop/Rac signaling in pollen germination and have agricultural implications for breeding robust seed yielding cultivars.
- Published
- 2021
12. CdSe-Decorated Flowerlike CaMoO
- Author
-
Yangfan, Xu, Yue, Han, Ruiyang, Zhao, Jishu, Han, and Lei, Wang
- Abstract
Photocatalytic hydrogen production technology from water is a more effective and promising method to solve energy and environmental crises. In this work, flowerlike CaMoO
- Published
- 2022
13. Direct CO2-to-renewable methanol: Outlook, performance and optimization approach
- Author
-
Athanasios A. Tountas, Xinyue Peng, Yangfan Xu, Rui Song, Lu Wang, Christos T. Maravelias, Geoffrey A. Ozin, and Mohini M. Sain
- Subjects
Renewable Energy, Sustainability and the Environment ,General Materials Science ,Waste Management and Disposal ,Industrial and Manufacturing Engineering - Published
- 2023
14. Comprehensive multiphase visualization of steel slag and related research in cement: Detection technology and application
- Author
-
Yangfan Xu, Yangyang Lv, and Chunxiang Qian
- Subjects
General Materials Science ,Building and Construction ,Civil and Structural Engineering - Published
- 2023
15. Hollow In2O3 nanotubes decorated with Cd0.67Mo0.33Se QDs for enhanced photocatalytic hydrogen production performance
- Author
-
Ruiyang Zhao, Ying Wang, Hong-Cun Bai, Yangfan Xu, Jishu Han, Jiaru Peng, and Lei Wang
- Subjects
Materials science ,Hydrogen ,Renewable Energy, Sustainability and the Environment ,Visible light irradiation ,Energy Engineering and Power Technology ,chemistry.chemical_element ,Electron ,Condensed Matter Physics ,Fuel Technology ,Chemical engineering ,chemistry ,Photocatalysis ,Water splitting ,Quantum efficiency ,Irradiation ,Hydrogen production - Abstract
Novel Cd0.67Mo0.33Se/In2O3 hollow nanotubes were prepared for photocatalytic hydrogen production application. Under visible light irradiation, Cd0.67Mo0.33Se/In2O3 hollow nanotubes showed enhanced photocatalytic performance. And the apparent quantum efficiency of 34.86% was obtained when irradiated with 420 nm monochromatic light. The modification of Cd0.67Mo0.33Se QDs on the surface of In2O3 hollow nanotubes effectively improved the utilization rate of light absorption, increased the separation and migration rate of electrons, inhibited the recombination of photo-generated electron and hole pairs, thus enhancing the photocatalytic activity of water splitting to produce hydrogen. It would be an efficient photocatalyst for hydrogen production application in future.
- Published
- 2021
16. Efficacy of kinesiology taping on the management of shin splints: a systematic review
- Author
-
Yuling Wang, Beibei Feng, Suimin Guo, Peizhen Liu, and Yangfan Xu
- Subjects
Medial Tibial Stress Syndrome ,medicine.medical_specialty ,Shin splints ,Strenuous exercise ,Psychological intervention ,MEDLINE ,Physical Therapy, Sports Therapy and Rehabilitation ,law.invention ,03 medical and health sciences ,0302 clinical medicine ,Key terms ,Randomized controlled trial ,law ,Humans ,Medicine ,Orthopedics and Sports Medicine ,030212 general & internal medicine ,Physical Therapy Modalities ,Kinesiology ,business.industry ,Muscle activation ,030229 sport sciences ,Proprioception ,medicine.disease ,Athletic Tape ,Athletic Injuries ,Physical therapy ,business - Abstract
Background: Shin splint is one of the most common sports injuries after strenuous exercise. Kinesiology taping (KT) is a popular noninvasive remedy used in sports-related disorders, with the potential effects of relieving pain, facilitating proprioception, modulating muscle activation and correcting abnormal movement patterns. However, the exact efficacy of KT on shin splints is still unknown, and previous findings are inconsistent. Hence, this study aimed to conduct a systematic review to evaluate the current status of relevant evidence on its efficacy. Methods: The review was performed according to the PRISMA guidelines, and a systematic search of the literature was conducted in December 2020. Electronic databases, Embase, Scopus, Medline, Web of Science, PubMed and Biomed Central were searched for the identification of pertinent studies with pre-defined key terms on shin splints and KT. Results: Four studies with a total sample size of 141 participants were included and analyzed. Two studies had within-subject designs, whereas the other two were randomized clinical trials. Although the positive results of KT were reported by the studies, methodological quality varied from poor to moderate according to the Physiotherapy Evidence Database Scale or Non-Randomized Studies-of Interventions. Conclusion: In conclusion, this review revealed that the efficacy of KT on shin splints remains not clear. Evidence that supports its effectiveness in individuals with shin splints is currently limited. Further studies with good methodological quality and study design are warranted.
- Published
- 2021
17. TMN: Temporal-guided Multiattention Network for Action Recognition
- Author
-
Yongkang Zhang, Han Zhang, Guoming Wu, Yangfan Xu, Zhiping Shi, and Jun Li
- Published
- 2022
18. Number-Theoretic Net-Based Particle Filtering for Linear Phase Noise Tracking in CO-OFDM Systems
- Author
-
Yangfan Xu, Xinwei Du, Shuai Liu, and Changyuan Yu
- Published
- 2022
19. The effect of tailored-made home-based exercise program on the training adherence of old patients underwent total hip and knee arthroplasty: A Randomized Controlled Pilot Study
- Author
-
Rongke Lv, Kangping Song, Peihui Wu, Yangfan Xu, Yangyang Lin, and Yuling Wang
- Published
- 2022
20. Involuntary, forced or voluntary exercise can ameliorate the cognitive deficits by enhancing levels of hippocampal NMDAR1, pAMPAR1 and pCaMKII in a model of vascular dementia
- Author
-
Zunlin Gao, Suiying Peng, Peihui Wu, Longfei You, Yangyang Lin, Yangfan Xu, Huiting Feng, Juntao Dong, and Yujie Deng
- Subjects
Male ,0301 basic medicine ,Neurogenesis ,Hippocampus ,Motor Activity ,Hippocampal formation ,Receptors, N-Methyl-D-Aspartate ,03 medical and health sciences ,0302 clinical medicine ,Cog ,Morris Water Maze Test ,Physical Conditioning, Animal ,mental disorders ,Animals ,Medicine ,Functional electrical stimulation ,Cognitive Dysfunction ,Receptors, AMPA ,Cognitive skill ,Rats, Wistar ,Vascular dementia ,bcl-2-Associated X Protein ,business.industry ,Dementia, Vascular ,Cognition ,Long-term potentiation ,General Medicine ,medicine.disease ,Electric Stimulation ,Rats ,Disease Models, Animal ,030104 developmental biology ,Neurology ,bcl-Associated Death Protein ,Neurology (clinical) ,Calcium-Calmodulin-Dependent Protein Kinase Type 2 ,business ,human activities ,Neuroscience ,030217 neurology & neurosurgery - Abstract
Objectives: To investigate the effect on vascular dementia of involuntary exercise induced by functional electrical stimulation and of forced and voluntary exercise, focusing on the recovery of cog...
- Published
- 2021
21. lncRNA HotairM1 Depletion Promotes Self-Renewal of Cancer Stem Cells through HOXA1-Nanog Regulation Loop
- Author
-
Xianqun Fan, Shengfang Ge, Yangfan Xu, Fang Li, Feifei Zhang, He Zhang, and Xiaofang Xu
- Subjects
0301 basic medicine ,Homeobox protein NANOG ,cancer stem cell ,biology ,lcsh:RM1-950 ,EZH2 ,HOXA1-Nanog regulation loop ,Tumor initiation ,self-renewal ,Long non-coding RNA ,Cell biology ,03 medical and health sciences ,lcsh:Therapeutics. Pharmacology ,030104 developmental biology ,0302 clinical medicine ,Histone ,Cancer stem cell ,030220 oncology & carcinogenesis ,Drug Discovery ,Cancer cell ,SUZ12 ,biology.protein ,Molecular Medicine ,Original Article ,HotairM1 - Abstract
In cancer cells, a gain of stemness may have profound implications for tumor initiation, aggressiveness, and clinical outcome. However, the molecular mechanisms underlying the self-renewal maintenance of cancer stem-like cells (CSCs) remain elusive. Here, based on analysis of transcriptome sequencing, we identified a long noncoding RNA (lncRNA) named HotairM1, which is weakly expressed in human colorectal carcinoma and uveal melanoma, and a much lower expression in corresponding CSCs. Our results showed that HotairM1 depletion could promote CSC self-renewal and tumor propagation. Mechanistically, HotairM1 recruit EZH2 and SUZ12 to the promoter of its target gene HOXA1, leading to histone H3K27 trimethylation and epigenetic silencing of HOXA1. The silence of HOXA1 subsequently induces the H3K27 acetylation at the enhancer site of Nanog gene to upregulate its expression. The enrichment of Nanog could further inhibit HOXA1 expression, forming a reciprocal regulation loop augmenting the stemness maintaining effect. In summary, our results revealed a lncRNA-based regulatory loop that sustains self-renewal of CSCs, which highlights the critical role of HotairM1 in CSC development through the HOXA1-Nanog signaling loop., Graphical Abstract, Knockdown of lncRNA HotairM1 could promote self-renewal of CSCs and subsequent tumor proliferation and propagation through inhibiting neighbor gene HOXA1 expression. HOXA1 would repress stemness maintenance of CSC through inhibiting Nanog expression.
- Published
- 2020
22. Comparative analysis of constitutes and metabolites for traditional Chinese medicine using IDA and SWATH data acquisition modes on LC-Q-TOF MS
- Author
-
Huimin Guo, Wenshuo Xu, He Wang, Yan Liang, Xiaoxi Yin, Qingqing Ding, Guangji Wang, Tengjie Yu, Dian Kang, and Yangfan Xu
- Subjects
Swath ms ,Lc q tof ms ,LC-Q-TOF MS ,Pharmaceutical Science ,02 engineering and technology ,Pharmacy ,Mass spectrometry ,01 natural sciences ,Analytical Chemistry ,Reduction (complexity) ,Data acquisition ,IDA-MS ,Drug Discovery ,Electrochemistry ,Sanguisorbins ,Sanguisorbin extract ,Spectroscopy ,Chemistry ,lcsh:RM1-950 ,010401 analytical chemistry ,021001 nanoscience & nanotechnology ,0104 chemical sciences ,lcsh:Therapeutics. Pharmacology ,SWATH-MS ,Original Article ,0210 nano-technology ,Biological system ,Energy (signal processing) - Abstract
Identification of components and metabolites of traditional Chinese medicines (TCMs) employing liquid chromatography-quadrupole time-of-flight mass spectrometry (LC-Q-TOF MS) techniques with information-dependent acquisition (IDA) approaches is increasingly frequent. A current drawback of IDA-MS is that the complexity of a sample might prevent important compounds from being triggered in IDA settings. Sequential window acquisition of all theoretical fragment-ion spectra (SWATH) is a data-independent acquisition (DIA) method where the instrument deterministically fragments all precursor ions within the predefined m/z range in a systematic and unbiased fashion. Herein, the superiority of SWATH on the detection of TCMs’ components was firstly investigated by comparing the detection efficiency of SWATH-MS and IDA-MS data acquisition modes, and sanguisorbin extract was used as a mode TCM. After optimizing the setting parameters of SWATH, rolling collision energy (CE) and variable Q1 isolation windows were found to be more efficient for sanguisorbin identification than the fixed CE and fixed Q1 isolation window. More importantly, the qualitative efficiency of SWATH-MS on sanguisorbins was found significantly higher than that of IDA-MS data acquisition. In IDA mode, 18 kinds of sanguisorbins were detected in sanguisorbin extract. A total of 47 sanguisorbins were detected when SWATH-MS was used under rolling CE and flexible Q1 isolation window modes. Besides, 26 metabolites of sanguisorbins were identified in rat plasma, and their metabolic pathways could be deduced as decarbonylation, oxidization, reduction, methylation, and glucuronidation according to their fragmental ions acquired in SWATH-MS mode. Thus, SWATH-MS data acquisition could provide more comprehensive information for the component and metabolite identification for TCMs than IDA-MS., Graphical abstract Image 1, Highlights • SWATH was first used to identify components and metabolites of TCMs. • Superiority of SWATH on the detection of TCM was firstly investigated. • The number of components detected by SWATH was greatly higher than IDA.
- Published
- 2020
23. Prevalence and Associated Factors of Complains on Depression, Anxiety, and Stress in University Students: An Extensive Population-Based Survey in China
- Author
-
Yanling, Yu, Wangwang, Yan, Jiadan, Yu, Yangfan, Xu, Dan, Wang, and Yuling, Wang
- Subjects
General Psychology - Abstract
Mental health issues are becoming increasingly prevalent amongst university students. However, research on the psychological profile of the general university population is relatively limited. Thus, this study analyses the current state of university students’ psychological conditions; the demographic differences in depression, anxiety, and stress and the influencing factors. The objectives are to provide additional appropriate guidance in mental health for university students with different demographic characteristics. A cross-sectional study of 6,032 university students nationwide was conducted from October 2020 to January 2021. A randomized whole-group sampling method was used to select the study participants, and the 21-item Depression, Anxiety, and Stress Scale (DASS) was used. P < 0.05 in the final model were considered statistically significant. The number of university students with no complain of depression, anxiety, or stress was 3,751 (62.2%). The odds of developing complain of depression were higher amongst anxious respondents (AOR = 23.417, 95% CI: 19.706, 27.826) and senior year (AOR = 2.210, 95% CI: 1.657, 2.947) than their counterparts. Students with “myopia” were 1.263 times more likely to be anxious (AOR = 1.263, 95% CI: 1.042–1.530). In terms of “impaired” or not, impaired is defined as any injury, such as sprain, strain, and fracture, “impaired” university students were 1.321 times more likely to be anxious (AOR = 1.321, 95% CI: 1.064–1.641). Furthermore, history of impairment and myopia increased the odds of stress by 1.305 (AOR = 1.305, 95% CI: 1.022–1.667) and 1.305 (AOR = 1.305, 95% CI: 1.012–1.683), respectively. Myopia, physical-activity-related injury (PARI) and irrational eating habits are risk factors for complain of anxiety and stress. Males, upper grades, low parental education, and irrational eating habits are risk factors for complain of depression. Low physical activity levels are also an influential factor for complain of depression. DASS consists of interchangeable risk factors and multiple complains of DASS may coexist.
- Published
- 2022
24. The diversity of comammox bacteria and the effect of sewage discharge on their abundance in eutrophic lake sediments
- Author
-
Xiaoqiong Wan, Jianwei Zhao, Guanglong Liu, Yangfan Xu, Duanwei Zhu, Yumei Hua, and Jinlong Hu
- Subjects
Ecology ,Stratigraphy ,Emergent plant ,04 agricultural and veterinary sciences ,010501 environmental sciences ,Biology ,Comammox ,biology.organism_classification ,01 natural sciences ,Anammox ,Abundance (ecology) ,040103 agronomy & agriculture ,0401 agriculture, forestry, and fisheries ,Nitrification ,Eutrophication ,Bacteria ,0105 earth and related environmental sciences ,Earth-Surface Processes ,Archaea - Abstract
Complete ammonia oxidation (comammox) bacteria can independently oxidize ammonia to nitrate, and their discovery has changed the long-term understanding of nitrification. Comammox bacteria have been found in a variety of natural environments, but there is still a lack of understanding regarding their presence in eutrophic lakes. The main purpose of this study was to investigate the diversity and abundance of comammox bacteria in a eutrophic lake and the effects of sewage discharge on bacterial abundance. Samples were taken from five areas of Lake Tangxun, China, i.e., a water chestnut (Trapa natans) area, a lotus (Nelumbo) area, a bare sediment area, a food sewage disposal area, and a domestic sewage disposal area. The diversity of comammox bacteria and the abundance of ammonia-oxidizing archaea (AOA), ammonia-oxidizing bacteria (AOB), comammox bacteria, and anaerobic ammonia-oxidizing (anammox) bacteria were measured. Comammox bacteria were widely found in Lake Tangxun and were closely related to Candidatus Nitrospira nitrosa and Candidatus Nitrospira inopinata. The abundance of the comammox amoA gene was lower in the two sewage discharge areas (1.3 × 107 copies g−1) than in the emergent plant areas (1.75 × 108 copies g−1) and the bare sediment area (1.0 × 108 copies g−1). The abundance of the comammox amoA gene at the five sampling areas was higher than that of the AOA amoA gene and AOB amoA gene, which indicated that comammox bacteria had a growth advantage in this eutrophic lake. Comammox bacteria were found in eutrophic lake sediments, and these bacteria belonged to comammox clade A. The abundance of comammox bacteria in the two sewage discharge areas was the lowest, indicating that they could survive in eutrophic waters, but eutrophication inhibited their growth.
- Published
- 2020
25. Pentamidine sensitizes FDA-approved non-antibiotics for the inhibition of multidrug-resistant Gram-negative pathogens
- Author
-
Kai Zhou, Luting Ji, Yangfan Xu, Xinxin Feng, Wei Huang, Ling Xia, Wenyao Li, Yandong Wu, Yuanxin Gu, Chang Liu, and Chenxuan Wu
- Subjects
0301 basic medicine ,Microbiology (medical) ,medicine.drug_class ,030106 microbiology ,Antibiotics ,Microbial Sensitivity Tests ,medicine.disease_cause ,Microbiology ,03 medical and health sciences ,0302 clinical medicine ,Drug Resistance, Multiple, Bacterial ,Enterobacter cloacae ,Gram-Negative Bacteria ,medicine ,Animals ,Humans ,030212 general & internal medicine ,Caenorhabditis elegans ,Escherichia coli ,Pentamidine ,biology ,United States Food and Drug Administration ,Mitomycin C ,Drug Repositioning ,Drug Synergism ,General Medicine ,Antimicrobial ,biology.organism_classification ,United States ,Anti-Bacterial Agents ,Multiple drug resistance ,Infectious Diseases ,Models, Animal ,Drug Therapy, Combination ,Gram-Negative Bacterial Infections ,Bacteria ,medicine.drug - Abstract
Pentamidine sensitizes FDA-approved antibiotics to combat Gram-negative pathogens. We screened 1374 FDA-approved non-antibiotics for their ability to be sensitized by pentamidine against Escherichia coli. We identified mitomycin C and mefloquine as potent hits effective against multiple drug-resistant, Gram-negative bacteria. Killing kinetics and an in vivo model with Caenorhabditis elegans (C. elegans) revealed that such combinations produced synergy against colistin-resistant Enterobacter cloacae (E. cloacae). These findings suggest combinations of FDA-approved non-antibiotics, and pentamidine can be repurposed into new antimicrobial agents.
- Published
- 2020
26. Diversity and abundance of comammox bacteria in the sediments of an urban lake
- Author
-
Guanglong Liu, Jianwei Zhao, Yangfan Xu, Xiaoqiong Wan, Yumei Hua, Duanwei Zhu, Jing Lu, and Yuchun Wang
- Subjects
China ,Geologic Sediments ,Applied Microbiology and Biotechnology ,03 medical and health sciences ,Water column ,Ammonia ,Abundance (ecology) ,RNA, Ribosomal, 16S ,Anaerobiosis ,Nitrogen cycle ,Ecosystem ,Phylogeny ,030304 developmental biology ,0303 health sciences ,Bacteria ,biology ,030306 microbiology ,Ecology ,General Medicine ,Eutrophication ,Nitrogen Cycle ,Ammonia monooxygenase ,Comammox ,biology.organism_classification ,Archaea ,Lakes ,Anammox ,Oxidoreductases ,Oxidation-Reduction ,Biotechnology - Abstract
Aims: Although comammox have been discovered in a variety of ecosystems, there are few studies in urban lakes. This paper attempted to confirm whether this ammonia-oxidizing microbe exists in urban lakes and to determine the factors influencing its existence. Methods and Results: This study investigated the diversity and abundance of comammox bacteria in sediments of a typical urban lake in China, and their ecological relationship with other ammonia-oxidizing micro-organisms. The phylogenetic analysis indicated that comammox clade A existed in the sediment of Lake Donghu, and the comammox bacteria co-existed with ammonia-oxidizing archaea (AOA), ammonia-oxidizing bacteria (AOB) and anaerobic ammonia-oxidizing (anammox) bacteria in the sediment of this lake. The abundances of the ammonia monooxygenase subunit A (amoA) genes for comammox, AOA, AOB and anammox 16S rRNA were 2·43 × 108, 1·07 × 108, 3·24 × 107 and 3·21 × 1011 copies per gram dry sediment respectively. Moreover, the amoA gene abundance of comammox was positively correlated with that of AOA and AOB. The redundancy analysis showed that the abundance of the comammox amoA gene was negatively correlated with the concentration of main indicators for nitrogen status in both the sediment and the water column, indicating that eutrophication may inhibit the growth of comammox bacteria. Conclusions: Comammox bacteria play an important ecological role in the nitrogen cycle of urban lake sediments. Significance and Impact of the Study: Our results indicated comammox bacteria were widespread in urban lakes and eutrophication may inhibit their growth.
- Published
- 2020
27. Ginsenoside Rb1 exerts neuroprotective effects through regulation of Lactobacillus helveticus abundance and GABAA receptor expression
- Author
-
Chong Chen, Huimin Chen, Haofeng Li, Dian Kang, Lin Xie, Huimin Guo, Yangfan Xu, Guangji Wang, Xiao Zheng, Jiajia Shen, and Yan Liang
- Subjects
0301 basic medicine ,Ginsenoside Rb1 ,Striatum ,GABAB receptor ,Pharmacology ,Biochemistry, Genetics and Molecular Biology (miscellaneous) ,Neuroprotection ,Proinflammatory cytokine ,03 medical and health sciences ,0302 clinical medicine ,Downregulation and upregulation ,lcsh:Botany ,Receptor ,Chemistry ,GABAA receptor ,Microbiota ,Antagonist ,Lactobacillus helveticus ,eye diseases ,lcsh:QK1-989 ,Pharmacology and Physiology ,030104 developmental biology ,Complementary and alternative medicine ,030220 oncology & carcinogenesis ,Gamma-aminobutyric acid receptor ,Neuroprotective effects ,Biotechnology - Abstract
Background: Ginsenoside Rb1 (Rb1), one of the most abundant protopanaxadiol-type ginsenosides, exerts excellent neuroprotective effects even though it has low intracephalic exposure. Purpose: The present study aimed to elucidate the apparent contradiction between the pharmacokinetics and pharmacodynamics of Rb1 by studying the mechanisms underlying neuroprotective effects of Rb1 based on regulation of microflora. Methods: A pseudo germ-free (PGF) rat model was established, and neuroprotective effects of Rb1 were compared between conventional and PGF rats. The relative abundances of common probiotics were quantified to reveal the authentic probiotics that dominate in the neuroprotection of Rb1. The expressions of the gamma-aminobutyric acid (GABA) receptors, including GABAA receptors (α2, β2, and γ2) and GABAB receptors (1b and 2), in the normal, ischemia/reperfusion (I/R), and I/R+Rb1 rat hippocampus and striatum were assessed to reveal the neuroprotective mechanism of Rb1. Results: The results showed that microbiota plays a key role in neuroprotection of Rb1. The relative abundance of Lactobacillus helveticus (Lac.H) increased 15.26 fold after pretreatment with Rb1. I/R surgery induced effects on infarct size, neurological deficit score, and proinflammatory cytokines (IL-1β, IL-6, and TNF-α) were prevented by colonizing the rat gastrointestinal tract with Lac.H (1 × 109 CFU) by gavage 15 d before I/R surgery. Both Rb1 and Lac.H upregulated expression of GABA receptors in I/R rats. Coadministration of a GABAA receptor antagonist significantly attenuated neuroprotective effects of Rb1 and Lac.H. Conclusion: In sum, Rb1 exerts neuroprotective effects by regulating Lac.H and GABA receptors rather than through direct distribution to the target sites. Keywords: Gamma-aminobutyric acid receptor, Ginsenoside Rb1, Lactobacillus helveticus, Microbiota, Neuroprotective effects
- Published
- 2020
28. Correction: Xu et al. Preparation of Long-Term Antibacterial SiO2-Cinnamaldehyde Microcapsule via Sol–Gel Approach as a Functional Additive for PBAT Film. Processes 2020, 8, 897
- Author
-
Yangfan Xu, Chongxing Huang, Xiujie Dang, Muhammad Rafiullah Khan, Haohe Huang, Yuan Zhao, and Shuangfei Wang
- Subjects
Process Chemistry and Technology ,Chemical Engineering (miscellaneous) ,Bioengineering - Abstract
In the original publication [...]
- Published
- 2023
29. A living photocatalyst derived from CaCu3Ti4O12 for CO2 hydrogenation to methanol at atmospheric pressure
- Author
-
Zaiyong Jiang, Zhimin Yuan, Paul N. Duchesne, Wei Sun, Xingshuai Lyu, Wenkang Miao, Camilo J. Viasus Pérez, Yangfan Xu, Deren Yang, Baibiao Huang, Ying Dai, Zheng Wang, Hong He, and Geoffrey A. Ozin
- Subjects
Chemistry (miscellaneous) ,Organic Chemistry ,Physical and Theoretical Chemistry - Published
- 2023
30. Imperceptible Adversarial Attack with Multi-granular Spatio-temporal Attention for Video Action Recognition
- Author
-
Guoming Wu, Yangfan Xu, Jun Li, Zhiping Shi, and Xianglong Liu
- Subjects
Computer Networks and Communications ,Hardware and Architecture ,Signal Processing ,Computer Science Applications ,Information Systems - Published
- 2023
31. Likelihood Ratio Test-Based Blind Carrier Frequency Offset Estimation for Coherent Optical OFDM Systems
- Author
-
Yangfan Xu, Xinwei Du, and Changyuan Yu
- Subjects
Modeling and Simulation ,Electrical and Electronic Engineering ,Computer Science Applications - Published
- 2023
32. The m
- Author
-
Yangfan, Xu, Xiaoyu, He, Shanzheng, Wang, Baofa, Sun, Ruobing, Jia, Peiwei, Chai, Fang, Li, Ying, Yang, Shengfang, Ge, Renbing, Jia, Yun-Gui, Yang, and Xianqun, Fan
- Subjects
RNA, Messenger - Abstract
N
- Published
- 2021
33. Insights into the Authentic Active Ingredients and Action Sites of Oral Exogenous Glutathione in the Treatment of Ischemic Brain Injury Based on Pharmacokinetic-Pharmacodynamic Studies
- Author
-
He Wang, Qingqing Ding, Yan Liang, Tengjie Yu, Guangji Wang, Boyu Shen, Chong Chen, Lin Xie, Huimin Guo, Kangrui Hu, and Yangfan Xu
- Subjects
Male ,Central nervous system ,Ischemia ,Administration, Oral ,Pharmaceutical Science ,Pharmacology ,Models, Biological ,030226 pharmacology & pharmacy ,Brain Ischemia ,Cell Line ,Rats, Sprague-Dawley ,Jejunum ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Ileum ,In vivo ,medicine ,Animals ,Humans ,Biotransformation ,Binding Sites ,Glutamate receptor ,Glutathione ,medicine.disease ,In vitro ,Disease Models, Animal ,Oxidative Stress ,medicine.anatomical_structure ,chemistry ,Blood-Brain Barrier ,Reperfusion Injury ,030220 oncology & carcinogenesis ,Cytokines ,Endothelium, Vascular ,Cysteine - Abstract
Glutathione (GSH) has been reported to be closely related to various diseases of the central nervous system, yet its authentic active ingredients and action sites remain unclear. In the present study, oral exogenous GSH significantly alleviated ischemic brain injury, but this result was inconsistent with its low bioavailability and blood-brain barrier (BBB) permeability. To ascertain the exposure of GSH-derived ingredients, including GSH, cysteine (CYS), glutamate (Glu), glycine (GLY), CYS-GLY, and γ-glutamylcysteine (γ-GC) were systematically studied both in vitro and in vivo. The outcomes demonstrated that oral GSH not only increases the GSH and CYS levels in rat striatum and cortex, but it also can decrease the rise of intracerebral Glu concentration caused by ischemia/reperfusion surgery. Then the influence of GSH on the BBB was investigated via measuring IgG leakage, intracerebral endotoxin, and tight-junction proteins. All indicators showed that GSH dosing can repair the destroyed BBB. Oral GSH greatly enhances the exposure of GSH, CYS, CYS-GLY, and γ-GC in rat duodenum, jejunum, ileum, and colon. Accumulating evidence reveals a close link between brain injury and gastrointestinal dysfunction. Our findings further suggest that oral GSH significantly improves intestinal inflammatory damage and barrier disruptions. In conclusion, oral GSH can have a direct therapeutic role in brain injury by stabilizing intracerebral levels of GSH, CYS, and Glu. It can also play an indirect therapeutic role by enhancing the intestinal exposure of GSH, CYS, CYS-GLY, and γ-GC and improving intestinal barrier disruptions. SIGNIFICANCE STATEMENT: The authentic active ingredients and action sites of exogenous glutathione (GSH) in the treatment of ischemic brain injury are unclear. We have shown that oral exogenous GSH not only stabilizes intracerebral levels of GSH, cysteine (CYS), and glutamate (Glu) to act directly on brain injury, but it can also exert an indirect therapeutic role by improving intestinal barrier disruptions. These findings have great significance for revealing the therapeutic effect of GSH on ischemic brain injury and for promoting its further development and clinical application.
- Published
- 2019
34. Cholesterol modification of SDF-1-specific siRNA enables therapeutic targeting of angiogenesis through Akt pathway inhibition
- Author
-
Shengfang Ge, Fang Li, Yao Fu, Weijie Zhang, Xianqun Fan, Yang Hu, Yangfan Xu, Linna Lu, Junzhao Chen, and Wei Xu
- Subjects
Male ,Stromal cell ,Angiogenesis ,Blotting, Western ,Angiogenesis Inhibitors ,Enzyme-Linked Immunosorbent Assay ,Real-Time Polymerase Chain Reaction ,Rats, Sprague-Dawley ,Neovascularization ,Cellular and Molecular Neuroscience ,Cell Movement ,In vivo ,Burns, Chemical ,Human Umbilical Vein Endothelial Cells ,medicine ,Animals ,Humans ,Sodium Hydroxide ,Corneal Neovascularization ,Phosphorylation ,RNA, Small Interfering ,Progenitor cell ,Protein kinase B ,Cells, Cultured ,PI3K/AKT/mTOR pathway ,Endothelial Progenitor Cells ,Chemistry ,Akt/PKB signaling pathway ,Mesenchymal Stem Cells ,Chemokine CXCL12 ,eye diseases ,Sensory Systems ,Rats ,Eye Burns ,Ophthalmology ,Cholesterol ,Gene Knockdown Techniques ,Cancer research ,medicine.symptom ,Proto-Oncogene Proteins c-akt - Abstract
Neovascularization during ocular tissue repair can cause severe visual loss in the optical axis and is therefore an issue of considerable concern to ophthalmologists. Here, we introduced a cholesterol-modified siRNA delivery system targeting stromal cell-derived factor 1 (SDF-1) to treat ocular angiogenesis in vivo. SDF-1 expression was analyzed in rat endothelial progenitor cells (EPCs) and bone marrow mesenchymal stem cells (BMSCs) using quantitative PCR (qPCR). Migration ability of BMSC and HUVEC were assessed through transwell assay. The proliferation effect of chol-siSDF1 on HUVEC was measured by colony formation assay. In vivo anti-angiogenic effects of chol-siSDF1 were tested in a cornea alkali burn model and the area of cornea neovascularization was measured using computer-imaging analysis system. Then phosphorylated Akt and total Akt protein levels were measured through western blot. Results turned out that rat EPCs and BMSCs showed high SDF-1 mRNA expression, which can be down-regulated by using chol-siSDF-1. Chol-siSDF-1 could significantly inhibit migration of BMSC and HUVEC. In addition, chol-siSDF1 also could inhibit HUVEC proliferation and exert a significant anti-angiogenic effect in corneal alkali burn model. As for the mechanism, chol-siSDF1 may inhibit the neovascularization, proliferation and metastasis through inhibiting the Akt signaling pathway. Thus, cholesterol modification of siRNA targeting SDF-1 displays an effective inhibition of migration and angiogenesis, with a much longer duration of inhibition effect.
- Published
- 2019
35. Diversity of anammox bacteria and abundance of functional genes for nitrogen cycling in the rhizosphere of submerged macrophytes in a freshwater lake in summer
- Author
-
Duanwei Zhu, Jianwei Zhao, Guanglong Liu, Yangfan Xu, Lei Peng, David P. Hamilton, Yumei Hua, and Xiaoqiong Wan
- Subjects
Rhizosphere ,biology ,Stratigraphy ,04 agricultural and veterinary sciences ,Ceratophyllum demersum ,010501 environmental sciences ,Ammonia monooxygenase ,biology.organism_classification ,01 natural sciences ,Vallisneria spiralis ,Macrophyte ,Anammox ,Botany ,040103 agronomy & agriculture ,0401 agriculture, forestry, and fisheries ,Nitrogen cycle ,0105 earth and related environmental sciences ,Earth-Surface Processes ,Archaea - Abstract
Submerged plants make an important contribution to nitrogen cycling in lakes including in the rhizosphere microenvironment through microbial activities. The main objective of this study was to investigate the abundance of functional genes for nitrogen cycling and the ecological relationship between these genes in the rhizosphere sediment of a freshwater lake in summer. Sediment from the rhizosphere of four submerged macrophytes (Ceratophyllum demersum, Hydrilla verticillata, Potamogeton maackianus, and Vallisneria spiralis) was sampled in Lake Liangzi, China, in summer. The anammox bacteria community structure and abundance of five functional genes for nitrogen cycling, ammonia monooxygenase (amoA) of ammonia-oxidizing bacteria (AOB) and ammonia-oxidizing archaea (AOA), anammox 16S rRNA, and nitrite reductase genes (nirK and nirS) in the sampled sediment, were determined. A total of 100 anammox gene sequences were grouped into eight operational taxonomic units (OTUs) and genus Ca. Kuenenia was the dominant species in Lake Liangzi in summer. Quantitative polymerase chain reaction (qPCR) revealed that gene copies of AOA amoA (2.42 × 106 copies g−1) were more than one order of magnitude higher than those of AOB amoA (1.98 × 105 copies g−1). The nirS gene (4.13 × 108 copies g−1) was more abundant than the nirK gene (7.28 × 107 copies g−1). There was no significant difference in the abundance of the AOB amoA gene among the rhizosphere of the four macrophytes. Redundancy analysis (RDA) showed a positive correlation between the abundance of the anammox 16S rRNA gene, AOA amoA and AOB amoA, which suggested two of these microbes may have provided a substrate for anammox bacteria in summer. The diversity of anammox in the rhizosphere of submerged macrophytes of the freshwater lake in summer was very low, but the plant species could affect the abundance of most nitrogen circulating bacteria, especially for anammox bacteria. Anammox 16S rRNA gene was positively correlated with four other functional genes, indicating that all four genes had significant effects on anammox bacteria.
- Published
- 2019
36. Effect of High-definition Transcranial Direct Current Stimulation on Conditioned Pain Modulation in Healthy Adults: A Crossover Randomized Controlled Trial
- Author
-
Yangfan Xu, Ziping Zhang, Yuling Wang, Yafei Wang, Ruihan Wan, Xue Jiang, Beibei Feng, and Ying Liu
- Subjects
Adult ,Pain Threshold ,Cross-Over Studies ,Transcranial direct-current stimulation ,business.industry ,General Neuroscience ,medicine.medical_treatment ,Analgesic ,Confounding ,Chronic pain ,Motor Cortex ,Stimulation ,medicine.disease ,Transcranial Direct Current Stimulation ,Crossover study ,law.invention ,Randomized controlled trial ,Conditioned pain modulation ,law ,Anesthesia ,medicine ,Humans ,Chronic Pain ,business - Abstract
The disorder of the conditioned pain modulation (CPM) system is one of the main causes of pain perception in individuals. High-definition transcranial direct current stimulation (HD-tDCS) targeting specific brain areas was indicated to have an analgesic effect possibly by activating the endogenous pain inhibition pathway evident in CPM. However, discrepancies were found in previous limited studies of varied homogeneity and quality. Therefore, the present study applied 2 mA HD-tDCS (20 min) in the left primary motor cortex (M1) among 35 healthy adults with a blinded crossover study design, to investigate its effectiveness on optimizing the analgesic effect in healthy individuals through assessing changes of the CPM. The univariate and multivariate general linear models were used to evaluate the intervention effect between-group on the Δ-value (after-intervention minus before-intervention) during CPM (primary outcome), pressure pain threshold (PPT), and cold pressure threshold (CPT) (secondary outcome), respectively. A significant between-group difference in Δ-CPM was found for active stimulation. HD-tDCS significantly improved the analgesic efficiency of Δ-CPM, compared with the sham control, after adjusting the confounding factors including age, gender, psychological status, as well as the sequence effect. The changes of CPM were positively correlated with the total physical activity volume. In conclusion, our findings provide evidence support to the effectiveness of HD-tDCS on endogenous pain modulation among healthy adults. Further studies are required to explore the analgesic effect of tDCS among patients with chronic pain, thereby facilitating optimal chronic pain management.
- Published
- 2021
37. Chronic mild and acute severe glaucomatous neurodegeneration derived from silicone oil-induced ocular hypertension
- Author
-
Haoliang Huang, Fang Fang, Pingting Liu, Yang Sun, Jie Zhang, Yang Hu, Liang Li, Roopa Dalal, Hannah C. Webber, Pei Zhuang, Liang Liu, and Yangfan Xu
- Subjects
Male ,Retinal Ganglion Cells ,medicine.medical_specialty ,genetic structures ,Science ,Glaucoma ,Ocular hypertension ,Article ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Ophthalmology ,medicine ,Pupillary response ,Animals ,Silicone Oils ,Intraocular Pressure ,Pupillary block ,Multidisciplinary ,Retina degeneration ,business.industry ,Retinal Degeneration ,Neurodegeneration ,medicine.disease ,eye diseases ,Mice, Inbred C57BL ,Disease Models, Animal ,Acute Disease ,Optic nerve diseases ,030221 ophthalmology & optometry ,Medicine ,Female ,Ocular Hypertension ,sense organs ,business ,030217 neurology & neurosurgery - Abstract
Recently, we established silicone oil-induced ocular hypertension (SOHU) mouse model with significant glaucomatous neurodegeneration. Here we characterize two additional variations of this model that simulate two distinct glaucoma types. The first is a chronic model produced by high frequency (HF) pupillary dilation after SO-induced pupillary block, which shows sustained moderate IOP elevation and corresponding slow, mild glaucomatous neurodegeneration. We also demonstrate that although SO removal quickly returns IOP to normal, the glaucomatous neurodegeneration continues to advance to a similar degree as in the HF group without SO removal. The second, an acute model created by no pupillary dilation (ND), shows a greatly elevated IOP and severe inner retina degeneration at an early time point. Therefore, by a straightforward dilation scheme, we extend our original SOHU model to recapitulate phenotypes of two major glaucoma forms, which will be invaluable for selecting neuroprotectants and elucidating their molecular mechanisms.
- Published
- 2021
38. Submerged plants alleviated the impacts of increased ammonium pollution on anammox bacteria and nirS denitrifiers in the rhizosphere
- Author
-
Yangfan Xu, Shanshan Huang, Jianwei Zhao, and Jing Lu
- Subjects
Potamogeton crispus ,Geologic Sediments ,Nitrite Reductases ,Nitrogen ,Health, Toxicology and Mutagenesis ,010501 environmental sciences ,01 natural sciences ,Denitrifying bacteria ,chemistry.chemical_compound ,Nitrate ,Aquatic plant ,RNA, Ribosomal, 16S ,Ammonium Compounds ,Environmental Chemistry ,Ammonium ,Phylogeny ,0105 earth and related environmental sciences ,Rhizosphere ,biology ,Bacteria ,General Medicine ,biology.organism_classification ,Pollution ,chemistry ,Anammox ,Environmental chemistry ,Eutrophication ,Oxidation-Reduction - Abstract
Excess nitrogen input into water bodies can cause eutrophication and affect the community structure and abundance of the nitrogen-transforming microorganisms; thus, it is essential to remove nitrogen from eutrophic water bodies. Aquatic plants can facilitate the growth of rhizosphere microorganisms. This study investigated the impact of ammonium pollution on the anammox and denitrifying bacteria in the rhizosphere of a cultivated submerged macrophyte, Potamogeton crispus (P. crispus) by adding three different concentrations of slow-release urea (0, 400, 600 mg per kg sediment) to the sediment to simulate different levels of nitrogen pollution in the lake. Results showed that the ammonium concentrations in the interstitial water under three pollution treatments were significantly different, but the nitrate concentration remained stable. The abundance of anammox 16S rRNA and nitrite reductase (nirS) gene in rhizosphere sediments exhibited no significant differences under the three pollution conditions. The increase in the nitrogen pollution levels did not significantly affect the growth of anammox bacteria and nirS denitrifying bacteria (denitrifiers). The change trend of the abundance ratio of (anammox 16S rRNA)/nirS in different nitrogen treatment groups on the same sampling date was very close, indicating that this ratio was not affected by ammonium pollution levels when P. crispus existed. The redundancy analysis showed that there was a positive correlation between the abundance of anammox 16S rRNA and nirS gene and that the abundance of these bacteria was significantly affected by the mole ratio of NH4+/NO3−. This study reveals that submerged plants weaken the environmental changes caused by ammonia pollution in the rhizosphere, thereby avoiding strong fluctuation of anammox bacteria and nirS denitrifiers.
- Published
- 2021
39. A polymeric approach toward resistance-resistant antimicrobial agent with dual-selective mechanisms of action
- Author
-
Hui Wang, Michael H. Cynamon, Carolyn Shoen, Brenda Andrade, Junfeng Song, Kai Zhou, Zheng Chen, Kailing Yang, Eric Oldfield, Yuanxin Gu, Yangfan Xu, Yugang Bai, Xinxin Feng, Steven C. Zimmerman, Min Wang, Cailing Zhou, Qingyun Cai, Jianxue Wang, and Silei Bai
- Subjects
0303 health sciences ,Multidisciplinary ,biology ,030306 microbiology ,Chemistry ,medicine.drug_class ,Intracellular parasite ,Antibiotics ,SciAdv r-articles ,Antimicrobial ,biology.organism_classification ,Microbiology ,03 medical and health sciences ,Antibiotic resistance ,Applied Sciences and Engineering ,medicine ,Colistin ,Extracellular ,Research Articles ,Bacteria ,Caenorhabditis elegans ,Research Article ,030304 developmental biology ,medicine.drug - Abstract
An oligoamidine with two bacteria-specific mechanisms of action showed broad-spectrum, resistance-resistant antimicrobial effect., Antibiotic resistance is now a major threat to human health, and one approach to combating this threat is to develop resistance-resistant antibiotics. Synthetic antimicrobial polymers are generally resistance resistant, having good activity with low resistance rates but usually with low therapeutic indices. Here, we report our solution to this problem by introducing dual-selective mechanisms of action to a short amidine-rich polymer, which can simultaneously disrupt bacterial membranes and bind to bacterial DNA. The oligoamidine shows unobservable resistance generation but high therapeutic indices against many bacterial types, such as ESKAPE strains and clinical isolates resistant to multiple drugs, including colistin. The oligomer exhibited excellent effectiveness in various model systems, killing extracellular or intracellular bacteria in the presence of mammalian cells, removing all bacteria from Caenorhabditis elegans, and rescuing mice with severe infections. This “dual mechanisms of action” approach may be a general strategy for future development of antimicrobial polymers.
- Published
- 2021
40. In vivo interactome profiling by enzyme-catalyzed proximity labeling
- Author
-
Yangfan Xu, Yang Hu, and Xianqun Fan
- Subjects
Profiling (computer programming) ,Protein interactome ,Enzyme catalyzed ,Computer science ,lcsh:Biotechnology ,Context (language use) ,TurboID ,Computational biology ,Review ,Proteomics ,Interactome ,General Biochemistry, Genetics and Molecular Biology ,lcsh:Biochemistry ,lcsh:Biology (General) ,Proximity labeling ,In vivo ,lcsh:TP248.13-248.65 ,Proteome ,lcsh:QD415-436 ,Catalytic efficiency ,APEX ,BioID ,lcsh:QH301-705.5 - Abstract
Enzyme-catalyzed proximity labeling (PL) combined with mass spectrometry (MS) has emerged as a revolutionary approach to reveal the protein-protein interaction networks, dissect complex biological processes, and characterize the subcellular proteome in a more physiological setting than before. The enzymatic tags are being upgraded to improve temporal and spatial resolution and obtain faster catalytic dynamics and higher catalytic efficiency. In vivo application of PL integrated with other state of the art techniques has recently been adapted in live animals and plants, allowing questions to be addressed that were previously inaccessible. It is timely to summarize the current state of PL-dependent interactome studies and their potential applications. We will focus on in vivo uses of newer versions of PL and highlight critical considerations for successful in vivo PL experiments that will provide novel insights into the protein interactome in the context of human diseases.
- Published
- 2020
41. A Depth Camera–Based, Task-Specific Virtual Reality Rehabilitation Game for Patients With Stroke: Pilot Usability Study (Preprint)
- Author
-
Yangfan Xu, Meiqinzi Tong, Wai-Kit Ming, Yangyang Lin, Wangxiang Mai, Weixin Huang, and Zhuoming Chen
- Abstract
BACKGROUND The use of virtual reality is popular in clinical rehabilitation, but the effects of using commercial virtual reality games in patients with stroke have been mixed. OBJECTIVE We developed a depth camera–based, task-specific virtual reality game, Stomp Joy, for poststroke rehabilitation of the lower extremities. This study aims to assess its feasibility and clinical efficacy. METHODS We carried out a feasibility test for Stomp Joy within representative user groups. Then, a clinical efficacy experiment was performed with a randomized controlled trial, in which 22 patients with stroke received 10 sessions (2 weeks) of conventional physical therapy only (control group) or conventional physical therapy plus 30 minutes of the Stomp Joy intervention (experimental group) in the clinic. The Fugl-Meyer Assessment for Lower Extremity (FMA-LE), Modified Barthel Index (MBI), Berg Balance Scale (BBS) score, single-leg stance (SLS) time, dropout rate, and adverse effects were recorded. RESULTS This feasibility test showed that Stomp Joy improved interest, pressure, perceived competence, value, and effort using the Intrinsic Motivation Inventory. The clinical efficacy trial showed a significant time-group interaction effect for the FMA-LE (P=.006), MBI (P=.001), BBS (P=.004), and SLS time (P=.001). A significant time effect was found for the FMA-LE (P=.001), MBI (PPP=.03). These indicated an improvement in lower extremity motor ability, basic activities of daily living, balance ability, and single-leg stance time in both groups after 2 weeks of the intervention. However, no significant group effects were found for the FMA-LE (P=.06), MBI (P=.76), and BBS (P=.38), while a significant group interaction was detected for SLS time (P CONCLUSIONS Stomp Joy is an effective depth camera–based virtual reality game for replacing part of conventional physiotherapy, achieving equally effective improvement in lower extremity function among stroke survivors. High-powered randomized controlled studies are now needed before recommending the routine use of Stomp Joy in order to confirm these findings by recruiting a large sample size.
- Published
- 2020
42. Synthesis and characterization of antibacterial polylactic acid film incorporated with cinnamaldehyde inclusions for fruit packaging
- Author
-
Linyun Zhang, Shuangfei Wang, Jian Wang, Chongxing Huang, Yangfan Xu, Hui Zhao, and Haohe Huang
- Subjects
Materials science ,Manufactured Materials ,Polyesters ,Food Contamination ,02 engineering and technology ,Biochemistry ,Cinnamaldehyde ,03 medical and health sciences ,Crystallinity ,chemistry.chemical_compound ,Polylactic acid ,X-Ray Diffraction ,Structural Biology ,Tensile Strength ,Ultimate tensile strength ,Materials Testing ,Spectroscopy, Fourier Transform Infrared ,Escherichia coli ,Acrolein ,Molecular Biology ,030304 developmental biology ,Antibacterial agent ,Inclusion method ,0303 health sciences ,beta-Cyclodextrins ,Food Packaging ,Water ,General Medicine ,021001 nanoscience & nanotechnology ,Listeria monocytogenes ,Oxygen ,chemistry ,Fruit ,Thermogravimetry ,Postharvest ,Food Microbiology ,Microscopy, Electron, Scanning ,0210 nano-technology ,Antibacterial activity ,Nuclear chemistry - Abstract
To maintain the quality of postharvest fruits continuously and meet the health requirements of consumers, a high barrier and long-lasting antibacterial polylactic acid film as packaging material was developed in this study. Polylactic acid-based antibacterial films incorporated with Cinnamaldehyde inclusions were used to achieve long-lasting antibacterial activity and improve the barrier properties. Cinnamaldehyde inclusions were prepared via the inclusion method and used as a sustained-release antibacterial agent and reinforcement to be incorporated into polylactic acid-based films within a concentration range of 0–30 wt%. The FT-IR spectrum demonstrated that the Cinnamaldehyde inclusions was physically interacting with PLA. The XRD results showed that the cinnamaldehyde inclusions at a concentration of 10 wt% enhanced the crystallinity of the antibacterial film. The oxygen and water vapor barrier properties of the film were respectively 14.29% and 12.38% higher than those of a pure PLA film. The tensile strength of the antibacterial film increased by 20%. And the antibacterial activity against Escherichia coli and Listeria monocytogenes was 100%. The release rate of cinnamaldehyde of the antibacterial film was slow and varied smoothly for 20 d.
- Published
- 2020
43. Preparation and characterization of β-cyclodextrin-oregano essential oil microcapsule and its effect on storage behavior of purple yam
- Author
-
Yangfan Xu, Cheng Yin, Dantong Zheng, Muhammad Rafiullah Khan, Haohe Huang, Hui Zhao, Chongxing Huang, Minghui Qi, and Lijie Huang
- Subjects
030309 nutrition & dietetics ,Shelf life ,law.invention ,03 medical and health sciences ,chemistry.chemical_compound ,0404 agricultural biotechnology ,law ,Food Preservation ,Origanum ,Browning ,Oils, Volatile ,Food science ,Fourier transform infrared spectroscopy ,Essential oil ,0303 health sciences ,Nutrition and Dietetics ,Dioscorea ,beta-Cyclodextrins ,04 agricultural and veterinary sciences ,Ascorbic acid ,040401 food science ,Plant Tubers ,chemistry ,Distilled water ,Food Storage ,Anthocyanin ,Food Preservatives ,Citric acid ,Agronomy and Crop Science ,Food Science ,Biotechnology - Abstract
Background Natural plant essential oils have antimicrobial properties; however, essential oils are difficult to maintain in a system because of their volatile nature. First, we prepared microcapsules from β-cyclodextrin and oregano essential oil and characterized their properties. Second, the effect of microcapsules on the preservation of freshly cut purple yam was studied using an edible coating technique. Purple yams immersed in distilled water were used as control, and their characteristics were compared with yams coated with citric acid, citric acid + sodium alginate, and citric acid + sodium alginate + β-cyclodextrin-oregano essential oil microcapsules (CA-SA-MC) and stored at 4 °C for 5 days. Results Microcapsules of oregano essential oil and β-cyclodextrin solution were successfully prepared via the inclusion method, with an optimal encapsulation efficiency of 55.14%. Scanning electron microscopy, Fourier transform infrared spectroscopy, and thermogravimetric analysis showed strong bonds between β-cyclodextrin and oregano essential oil. All edible coatings, particularly CA-SA-MC, significantly (P ≤ 0.05) maintained firmness, total soluble solids, ascorbic acid content, and anthocyanin content compared with control treatment. This treatment also prevented browning and extended the shelf life of purple yam. Conclusion Oregano essential oil can be successfully encapsulated into cyclodextrin microcapsules. It has a great impact on the shelf life extension of purple yam and could be successfully applied to other fresh produce. © 2020 Society of Chemical Industry.
- Published
- 2020
44. Synergizing Photo-Thermal H
- Author
-
Sanli, Tang, Xueli, Xing, Wei, Yu, Jie, Sun, Yimin, Xuan, Lu, Wang, Yangfan, Xu, Hui, Hong, and Hongguang, Jin
- Subjects
Energy Resources ,Electrochemical Energy Conversion ,Article ,Energy Materials - Abstract
Summary Solar hydrogen and electricity are promising high energy-density renewable sources. Although photochemistry or photovoltaics are attractive routes, special challenge arises in sunlight conversion efficiency. To improve efficiency, various semiconductor materials have been proposed with selective sunlight absorption. Here, we reported a hybrid system synergizing photo-thermochemical hydrogen and photovoltaics, harvesting full-spectrum sunlight in a cascade manner. A simple suspension of Au-TiO2 in water/methanol serves as a spectrum selector, absorbing ultraviolet-visible and infrared energy for rapid photo-thermochemical hydrogen production. The transmitted visible and near-infrared energy fits the photovoltaic bandgap and retains the high efficiency of a commercial photovoltaic cell under different solar concentration values. The experimental design achieved an overall efficiency of 4.2% under 12 suns solar concentration. Furthermore, the results demonstrated a reduced energy loss in full-spectrum energy conversion into hydrogen and electricity. Such simple integration of photo-thermochemical hydrogen and photovoltaics would create a pathway toward cascading use of sunlight energy., Graphical Abstract, Highlights • An integration of both photothermal H2 and PV was proposed at full solar spectrum • Absorbed UV-vis and IR generate H2 faster than reported full-spectrum catalysis • Transmitted Vis and near-IR bands retain the high efficiency of commercial PV cells • A novel device was designed with experimental overall efficiency of 4.2% at 12 suns, Electrochemical Energy Conversion; Energy Resources; Energy Materials
- Published
- 2020
45. 89Comparison Study of The Montreal Cognitive Assessment(MoCA-CN) and The Quick Mild Cognitive Impairment Screen (Qmci-CN) in Post-Stroke Patients
- Author
-
D. William Molloy, Lingrong Yi, Rónán Ó. Caoimh, Yangfan Xu, Yuling Wang, and Zhuoming Chen
- Subjects
Aging ,medicine.medical_specialty ,Physical medicine and rehabilitation ,business.industry ,Ischemic stroke ,Post stroke ,Montreal Cognitive Assessment ,Medicine ,General Medicine ,Geriatrics and Gerontology ,business ,Cognitive impairment ,Minimal cognitive impairment - Published
- 2018
46. Long Non-coding RNA LINC-PINT Suppresses Cell Proliferation and Migration of Melanoma via Recruiting EZH2
- Author
-
Yangfan Xu, Huixue Wang, Fang Li, Ludwig M. Heindl, Xiaoyu He, Jie Yu, Jie Yang, Shengfang Ge, Jing Ruan, Renbing Jia, and Xianqun Fan
- Subjects
0301 basic medicine ,CDK1 ,LINC-PINT ,Biology ,medicine.disease_cause ,Cell and Developmental Biology ,03 medical and health sciences ,0302 clinical medicine ,melanoma ,medicine ,PCNA ,EZH2 ,lcsh:QH301-705.5 ,Original Research ,AURKA ,Cell growth ,Melanoma ,Cell Biology ,CCNA2 ,Cell cycle ,medicine.disease ,Long non-coding RNA ,Chromatin ,030104 developmental biology ,lcsh:Biology (General) ,030220 oncology & carcinogenesis ,Cancer research ,Carcinogenesis ,Chromatin immunoprecipitation ,Developmental Biology - Abstract
Long non-coding RNAs (lncRNAs) have been identified as crucial regulators in many human cancers. Many lncRNAs show aberrant expression in cancer, and some of them play critical roles in tumor proliferation, invasion, and metastasis. However, the regulatory functions of lncRNAs in melanoma progression remain to be elucidated. We utilized the Real-time PCR methodology to determine the expression of LINC-PINT in melanoma cell lines. To evaluate the effect of LINC-PINT on tumorigenesis of melanoma, we used Cell Counting Kit-8 (CCK8) and colony formation assay. Flow cytometry assay was used to detect the function of LINC-PINT on cell cycle status. PINT-interacting proteins were identified by chromatin isolation using RNA purification (ChIRP). Microarray assay and bioinformatics analysis were used to find the potential target genes of LINC-PINT and the status of LINC-PINT target gene candidate was verified using chromatin immunoprecipitation assay (ChIP). LINC-PINT plays a role in suppressing the tumorigenicity of melanoma, which was further determined by xenograft model assay. LINC-PINT was significantly downregulated in melanoma tissues and cell lines. The overexpression of LINC-PINT in tumor cells resulted in significant tumor growth reduction and migration inhibition in A375, Mum2B and CRMM1 cells. Results based on the in vivo xenograft model were further consistent with the in vitro findings that LINC-PINT impeded growth and metastasis of melanoma cells. Microarray assay and bioinformatics analysis indicated that CDK1, CCNA2, AURKA, and PCNA were potential targets of LINC-PINT. In conclusion, LINC-PINT inhibits the tumorigenicity of melanoma through recruiting EZH2 to the promoter of its target genes, leading to H3K27 trimethylation and epigenetic silencing of target genes. LINC-PINT may serve as a novel diagnostic and therapeutic target for melanoma.
- Published
- 2019
47. Updates on the clinical diagnosis and management of ocular sebaceous carcinoma: a brief review of the literature
- Author
-
Fang Li, Yangfan Xu, Renbing Jia, and Xianqun Fan
- Subjects
medicine.medical_specialty ,Palliative care ,sebaceous carcinoma ,medicine.medical_treatment ,Cryotherapy ,Review ,Malignancy ,030207 dermatology & venereal diseases ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Pharmacology (medical) ,therapy ,periocular cancers ,business.industry ,Wide local excision ,Neck dissection ,medicine.disease ,Radiation therapy ,Oncology ,Pagetoid ,030221 ophthalmology & optometry ,Radiology ,Mohs micrographic surgery ,business ,Sebaceous carcinoma - Abstract
Ocular sebaceous carcinoma (SC) is an exceedingly rare but aggressive malignancy that can impair patients’ visual acuity or even cause tumor-specific mortality. This tumor usually mimics chronic benign eyelid lesions, thus leading to delayed diagnosis, thereby causing high recurrence and metastasis. Ophthalmologists should be more aware of SC in order to offer correct diagnosis and treatment at the onset of symptoms. Prompt surgical excision with frozen section margin control is the mainstay of SC management after patient evaluation and accurate biopsy. Mohs micrographic surgery has been associated with better tumor control outcomes than wide local excision. Radiation therapy should be considered as adjuvant treatment for locally advanced (stage T3a or higher) or high-risk (pagetoid spread) SC, nodal metastasis, or palliative care. Cryotherapy and topical chemotherapy are used for pagetoid spread. Targeted therapy has an emerging role in more complicated cases. For lymph node and distant metastasis, combination treatments should be provided, including lymph node and neck dissection, radiation therapy, systemic chemotherapy, and even orbital exenteration. The rarity of ocular SC precludes a comprehensive perspective on standard treatment. This paper offers a brief review of recent advances in the clinical diagnosis and management of ocular SC based on current scientific literature.
- Published
- 2018
48. An alternatingly amphiphilic, resistance-resistant antimicrobial oligoguanidine with dual mechanisms of action
- Author
-
Kai Zhou, Chenxuan Wu, Yingjie Wang, Silei Bai, Cailing Zhou, Yangfan Xu, Kang Wen, Junfeng Song, Qingyun Cai, Xinxin Feng, Wei Huang, Zhiyong Chen, Yugang Bai, and Hui Wang
- Subjects
Antimicrobial peptides ,Biophysics ,Bioengineering ,Microbial Sensitivity Tests ,02 engineering and technology ,Oligomer ,Bacterial cell structure ,Biomaterials ,Mice ,03 medical and health sciences ,chemistry.chemical_compound ,Anti-Infective Agents ,Drug Resistance, Multiple, Bacterial ,medicine ,Animals ,Nucleoid ,Cytotoxicity ,030304 developmental biology ,0303 health sciences ,biology ,Chemistry ,021001 nanoscience & nanotechnology ,Antimicrobial ,biology.organism_classification ,Anti-Bacterial Agents ,Mechanism of action ,Mechanics of Materials ,Ceramics and Composites ,medicine.symptom ,0210 nano-technology ,Bacteria ,Antimicrobial Cationic Peptides - Abstract
The increasing number of infections caused by multi-drug resistance (MDR) bacteria is an omen of a new global challenge. As one of the countermeasures under development, antimicrobial peptides (AMPs) and AMP mimics have emerged as a new family of antimicrobial agents with high potential, due to their low resistance generation rate and effectiveness against MDR bacterial strains resulted from their membrane-disrupting mechanism of action. However, most reported AMPs and AMP mimics have facially amphiphilic structures, which may lead to undesired self-aggregation and non-specific binding, as well as increased cytotoxicity toward mammalian cells, all of which put significant limits on their applications. Here, we report an oligomer with the size of short AMPs, with both hydrophobic carbon chain and cationic groups placed on its backbone, giving an alternatingly amphiphilic structure that brings better selectivity between mammalian and bacterial cell membranes. In addition, the oligomer shows affinity toward DNA, thus it can utilize bacterial DNA located in the vulnerable nucleoid as the second drug target. Benefiting from these designs, the oligomer shows higher therapeutic index and synergistic effect with other antibiotics, while its low resistance generation rate and effectiveness on multi-drug resistant bacterial strains can be maintained. We demonstrate that this alternatingly amphiphilic, DNA-binding oligomer is not only resistance-resistant, but is also able to selectively eliminate bacteria at the presence of mammalian cells. Importantly, the oligomer exhibits good in vivo activity: it cleans all bacteria on Caenorhabditis elegans without causing apparent toxicity, and significantly improves the survival rate of mice with severely infected wounds in a mice excision wound model study.
- Published
- 2021
49. 290Development of the Chinese Version of the Quick Mild Cognitive Impairment (Qmci-CN) Screen
- Author
-
Yang Gao, Yangfan Xu, Zhuoming Chen, Li Xian, William Molloy, Rónán O'Caoimh, and Yuying Yu
- Subjects
Aging ,medicine.medical_specialty ,030214 geriatrics ,business.industry ,General Medicine ,Audiology ,03 medical and health sciences ,Chinese version ,0302 clinical medicine ,medicine ,Geriatrics and Gerontology ,Cognitive impairment ,business ,030217 neurology & neurosurgery - Published
- 2017
50. Successful outcome of anaplastic multiple myeloma with lenalidomide, cyclophosphamide, and dexamethasone therapy
- Author
-
Bing Xiang, Wenjiao Tang, and Yangfan Xu
- Subjects
Oncology ,medicine.medical_specialty ,Hematology ,Cyclophosphamide ,business.industry ,General Medicine ,medicine.disease ,Internal medicine ,Medicine ,business ,Multiple myeloma ,Dexamethasone ,medicine.drug ,Lenalidomide - Published
- 2020
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.