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1. Additional file 9: of FOXM1 expression is significantly associated with chemotherapy resistance and adverse prognosis in non-serous epithelial ovarian cancer patients

Author

Tassi, Renata, Todeschini, Paola, Siegel, Eric, Calza, Stefano, Cappella, Paolo, Ardighieri, Laura, Cadei, Moris, Bugatti, Mattia, Romani, Chiara, Bandiera, Elisabetta, Zanotti, Laura, Tassone, Laura, Guarino, Donatella, Santonocito, Concetta, Capoluongo, Ettore, Beltrame, Luca, Erba, Eugenio, Marchini, Sergio, D’Incalci, Maurizio, Donzelli, Carla, Santin, Alessandro, Pecorelli, Sergio, Sartori, Enrico, Bignotti, Eliana, Odicino, Franco, and Ravaggi, Antonella more...

Abstract

Figure S6: Volcano plot displaying differential expressed genes between siFOXM1 and siControl OVCAR-3 cells. Table S15: List of down-regulated genes in siFOXM1 OVCAR-3 cells. Table S16: List of up-regulated genes in siFOXM1 OVCAR-3 cells. (DOCX 345Â kb) more...

Published
2017
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2. Additional file 3: Table S3. of MAL gene overexpression as a marker of high-grade serous ovarian carcinoma stem-like cells that predicts chemoresistance and poor prognosis

Author

Zanotti, Laura, Romani, Chiara, Tassone, Laura, Todeschini, Paola, Tassi, Renata Alessandra, Bandiera, Elisabetta, Damia, Giovanna, Ricci, Francesca, Ardighieri, Laura, Calza, Stefano, Marchini, Sergio, Beltrame, Luca, Tognon, Germana, D’Incalci, Maurizio, Pecorelli, Sergio, Sartori, Enrico, Odicino, Franco, Ravaggi, Antonella, and Bignotti, Eliana more...

Subjects
embryonic structures, respiratory system
Abstract

Short Tandem Repeat (STR) DNA profile of parent OVA-BS4 cell line and OVA-BS4 spheroids. (DOCX 12Â kb)

Published
2017
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3. Additional file 2: Table S2. of MAL gene overexpression as a marker of high-grade serous ovarian carcinoma stem-like cells that predicts chemoresistance and poor prognosis

Author

Zanotti, Laura, Romani, Chiara, Tassone, Laura, Todeschini, Paola, Tassi, Renata Alessandra, Bandiera, Elisabetta, Damia, Giovanna, Ricci, Francesca, Ardighieri, Laura, Calza, Stefano, Marchini, Sergio, Beltrame, Luca, Tognon, Germana, D’Incalci, Maurizio, Pecorelli, Sergio, Sartori, Enrico, Odicino, Franco, Ravaggi, Antonella, and Bignotti, Eliana more...

Abstract

Genes related to chemoresistance. A panel of 34 genes related to chemoresistant phenotype were derived from the literature. Ten of these genes were among the 6964 significant genes differentially expressed between OVA-BS4 spheroids and parent cell line. (DOCX 14Â kb) more...

Published
2017
Full Text
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4. Additional file 8: of FOXM1 expression is significantly associated with chemotherapy resistance and adverse prognosis in non-serous epithelial ovarian cancer patients

Author

Tassi, Renata, Todeschini, Paola, Siegel, Eric, Calza, Stefano, Cappella, Paolo, Ardighieri, Laura, Cadei, Moris, Bugatti, Mattia, Romani, Chiara, Bandiera, Elisabetta, Zanotti, Laura, Tassone, Laura, Guarino, Donatella, Santonocito, Concetta, Capoluongo, Ettore, Beltrame, Luca, Erba, Eugenio, Marchini, Sergio, D’Incalci, Maurizio, Donzelli, Carla, Santin, Alessandro, Pecorelli, Sergio, Sartori, Enrico, Bignotti, Eliana, Odicino, Franco, and Ravaggi, Antonella more...

Abstract

Figure S5: Volcano plot displaying differential expressed genes between siFOXM1 and siControl OSPC2 cells. Table S13: List of down-regulated genes in siFOXM1 OSPC2 cells. Table S14: List of up-regulated genes in siFOXM1 OSPC2 cells. (DOCX 260Â kb) more...

Published
2017
Full Text
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5. Additional file 2: Table S2. of MAL gene overexpression as a marker of high-grade serous ovarian carcinoma stem-like cells that predicts chemoresistance and poor prognosis

Author

Zanotti, Laura, Romani, Chiara, Tassone, Laura, Todeschini, Paola, Tassi, Renata Alessandra, Bandiera, Elisabetta, Damia, Giovanna, Ricci, Francesca, Ardighieri, Laura, Calza, Stefano, Marchini, Sergio, Beltrame, Luca, Tognon, Germana, D’Incalci, Maurizio, Pecorelli, Sergio, Sartori, Enrico, Odicino, Franco, Ravaggi, Antonella, and Bignotti, Eliana more...

Abstract

Genes related to chemoresistance. A panel of 34 genes related to chemoresistant phenotype were derived from the literature. Ten of these genes were among the 6964 significant genes differentially expressed between OVA-BS4 spheroids and parent cell line. (DOCX 14Â kb) more...

Published
2017
Full Text
View/download PDF

6. Additional file 7: of FOXM1 expression is significantly associated with chemotherapy resistance and adverse prognosis in non-serous epithelial ovarian cancer patients

Author

Tassi, Renata, Todeschini, Paola, Siegel, Eric, Calza, Stefano, Cappella, Paolo, Ardighieri, Laura, Cadei, Moris, Bugatti, Mattia, Romani, Chiara, Bandiera, Elisabetta, Zanotti, Laura, Tassone, Laura, Guarino, Donatella, Santonocito, Concetta, Capoluongo, Ettore, Beltrame, Luca, Erba, Eugenio, Marchini, Sergio, D’Incalci, Maurizio, Donzelli, Carla, Santin, Alessandro, Pecorelli, Sergio, Sartori, Enrico, Bignotti, Eliana, Odicino, Franco, and Ravaggi, Antonella more...

Abstract

Figure S4: Volcano plot displaying differential expressed genes between siFOXM1 and siControl EOC-CC1 cells. Table S11: List of down-regulated genes in siFOXM1 EOC-CC1 cells. Table S12: List of up-regulated genes in siFOXM1 EOC-CC1 cells. (DOCX 160Â kb) more...

Published
2017
Full Text
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7. Additional file 11: Figure S7. of FOXM1 expression is significantly associated with chemotherapy resistance and adverse prognosis in non-serous epithelial ovarian cancer patients

Author

Tassi, Renata, Todeschini, Paola, Siegel, Eric, Calza, Stefano, Cappella, Paolo, Ardighieri, Laura, Cadei, Moris, Bugatti, Mattia, Romani, Chiara, Bandiera, Elisabetta, Zanotti, Laura, Tassone, Laura, Guarino, Donatella, Santonocito, Concetta, Capoluongo, Ettore, Beltrame, Luca, Erba, Eugenio, Marchini, Sergio, D’Incalci, Maurizio, Donzelli, Carla, Santin, Alessandro, Pecorelli, Sergio, Sartori, Enrico, Bignotti, Eliana, Odicino, Franco, and Ravaggi, Antonella more...

Subjects
endocrine system diseases, female genital diseases and pregnancy complications, 3. Good health
Abstract

Functional analysis of the genome-wide transcriptional response in FOXM1-silenced EOC cells. Putative network reconstruction on EOC-CC1 and OSPC2 cells. (PDF 178Â kb)

8. Additional file 5: of FOXM1 expression is significantly associated with chemotherapy resistance and adverse prognosis in non-serous epithelial ovarian cancer patients

Author

Tassi, Renata, Todeschini, Paola, Siegel, Eric, Calza, Stefano, Cappella, Paolo, Ardighieri, Laura, Cadei, Moris, Bugatti, Mattia, Romani, Chiara, Bandiera, Elisabetta, Zanotti, Laura, Tassone, Laura, Guarino, Donatella, Santonocito, Concetta, Capoluongo, Ettore, Beltrame, Luca, Erba, Eugenio, Marchini, Sergio, D’Incalci, Maurizio, Donzelli, Carla, Santin, Alessandro, Pecorelli, Sergio, Sartori, Enrico, Bignotti, Eliana, Odicino, Franco, and Ravaggi, Antonella more...

Subjects
endocrine system diseases, female genital diseases and pregnancy complications, 3. Good health
Abstract

Results of the characterization of OSPC2 and EOC-CC1 cell lines; Table S6: Panel of immunocytochemical stains in EOC cell cultures; Table S7: STR profiles of EOC-CC1 and OSPC2 biopsies and derived cell lines; Table S8: List of BRCA1 and BRCA2 sequence variants in OSPC2 cell line; Table S9: List of BRCA1 and BRCA2 sequence variants in EOC-CC1 cell line; Figure S1: Immunohistochemical stain for FOXM1 in original clinical tumor samples and in derived cell lines. Figure S2: EOC cell lines growth curves; Table S10: Optimal cell densities for seeding different cell lines in culture. (DOCX 552Â kb) more...

9. Additional file 5: of FOXM1 expression is significantly associated with chemotherapy resistance and adverse prognosis in non-serous epithelial ovarian cancer patients

Author

Tassi, Renata, Todeschini, Paola, Siegel, Eric, Calza, Stefano, Cappella, Paolo, Ardighieri, Laura, Cadei, Moris, Bugatti, Mattia, Romani, Chiara, Bandiera, Elisabetta, Zanotti, Laura, Tassone, Laura, Guarino, Donatella, Santonocito, Concetta, Capoluongo, Ettore, Beltrame, Luca, Erba, Eugenio, Marchini, Sergio, D’Incalci, Maurizio, Donzelli, Carla, Santin, Alessandro, Pecorelli, Sergio, Sartori, Enrico, Bignotti, Eliana, Odicino, Franco, and Ravaggi, Antonella more...

Subjects
endocrine system diseases, female genital diseases and pregnancy complications, 3. Good health
Abstract

Results of the characterization of OSPC2 and EOC-CC1 cell lines; Table S6: Panel of immunocytochemical stains in EOC cell cultures; Table S7: STR profiles of EOC-CC1 and OSPC2 biopsies and derived cell lines; Table S8: List of BRCA1 and BRCA2 sequence variants in OSPC2 cell line; Table S9: List of BRCA1 and BRCA2 sequence variants in EOC-CC1 cell line; Figure S1: Immunohistochemical stain for FOXM1 in original clinical tumor samples and in derived cell lines. Figure S2: EOC cell lines growth curves; Table S10: Optimal cell densities for seeding different cell lines in culture. (DOCX 552Â kb) more...

10. Additional file 5: of FOXM1 expression is significantly associated with chemotherapy resistance and adverse prognosis in non-serous epithelial ovarian cancer patients

Author

Tassi, Renata, Todeschini, Paola, Siegel, Eric, Calza, Stefano, Cappella, Paolo, Ardighieri, Laura, Cadei, Moris, Bugatti, Mattia, Romani, Chiara, Bandiera, Elisabetta, Zanotti, Laura, Tassone, Laura, Guarino, Donatella, Santonocito, Concetta, Capoluongo, Ettore, Beltrame, Luca, Erba, Eugenio, Marchini, Sergio, D’Incalci, Maurizio, Donzelli, Carla, Santin, Alessandro, Pecorelli, Sergio, Sartori, Enrico, Bignotti, Eliana, Odicino, Franco, and Ravaggi, Antonella more...

Subjects
endocrine system diseases, female genital diseases and pregnancy complications, 3. Good health
Abstract

Results of the characterization of OSPC2 and EOC-CC1 cell lines; Table S6: Panel of immunocytochemical stains in EOC cell cultures; Table S7: STR profiles of EOC-CC1 and OSPC2 biopsies and derived cell lines; Table S8: List of BRCA1 and BRCA2 sequence variants in OSPC2 cell line; Table S9: List of BRCA1 and BRCA2 sequence variants in EOC-CC1 cell line; Figure S1: Immunohistochemical stain for FOXM1 in original clinical tumor samples and in derived cell lines. Figure S2: EOC cell lines growth curves; Table S10: Optimal cell densities for seeding different cell lines in culture. (DOCX 552Â kb) more...

11. Additional file 11: Figure S7. of FOXM1 expression is significantly associated with chemotherapy resistance and adverse prognosis in non-serous epithelial ovarian cancer patients

Author

Tassi, Renata, Todeschini, Paola, Siegel, Eric, Calza, Stefano, Cappella, Paolo, Ardighieri, Laura, Cadei, Moris, Bugatti, Mattia, Romani, Chiara, Bandiera, Elisabetta, Zanotti, Laura, Tassone, Laura, Guarino, Donatella, Santonocito, Concetta, Capoluongo, Ettore, Beltrame, Luca, Erba, Eugenio, Marchini, Sergio, D’Incalci, Maurizio, Donzelli, Carla, Santin, Alessandro, Pecorelli, Sergio, Sartori, Enrico, Bignotti, Eliana, Odicino, Franco, and Ravaggi, Antonella more...

Subjects
endocrine system diseases, female genital diseases and pregnancy complications, 3. Good health
Abstract

Functional analysis of the genome-wide transcriptional response in FOXM1-silenced EOC cells. Putative network reconstruction on EOC-CC1 and OSPC2 cells. (PDF 178Â kb)

12. Additional file 2: of FOXM1 expression is significantly associated with chemotherapy resistance and adverse prognosis in non-serous epithelial ovarian cancer patients

Author

Tassi, Renata, Todeschini, Paola, Siegel, Eric, Calza, Stefano, Cappella, Paolo, Ardighieri, Laura, Cadei, Moris, Bugatti, Mattia, Romani, Chiara, Bandiera, Elisabetta, Zanotti, Laura, Tassone, Laura, Guarino, Donatella, Santonocito, Concetta, Capoluongo, Ettore, Beltrame, Luca, Erba, Eugenio, Marchini, Sergio, D’Incalci, Maurizio, Donzelli, Carla, Santin, Alessandro, Pecorelli, Sergio, Sartori, Enrico, Bignotti, Eliana, Odicino, Franco, and Ravaggi, Antonella more...

Subjects
3. Good health
Abstract

Description of microarray analysis on EOC tissue specimens and cell lines. Table S3: Genes related to tumor invasion-metastasis used for the Gene-Sets Enrichment Analysis (GSEA). (DOCX 18Â kb)

13. Additional file 6: Figure S3. of FOXM1 expression is significantly associated with chemotherapy resistance and adverse prognosis in non-serous epithelial ovarian cancer patients

Author

Tassi, Renata, Todeschini, Paola, Siegel, Eric, Calza, Stefano, Cappella, Paolo, Ardighieri, Laura, Cadei, Moris, Bugatti, Mattia, Romani, Chiara, Bandiera, Elisabetta, Zanotti, Laura, Tassone, Laura, Guarino, Donatella, Santonocito, Concetta, Capoluongo, Ettore, Beltrame, Luca, Erba, Eugenio, Marchini, Sergio, D’Incalci, Maurizio, Donzelli, Carla, Santin, Alessandro, Pecorelli, Sergio, Sartori, Enrico, Bignotti, Eliana, Odicino, Franco, and Ravaggi, Antonella more...

Subjects
endocrine system diseases, female genital diseases and pregnancy complications, 3. Good health
Abstract

Flow cytometric and BrdU analyses of DNA content in siFOXM1 EOC cells. (DOCX 1100Â kb)

14. Additional file 1: of FOXM1 expression is significantly associated with chemotherapy resistance and adverse prognosis in non-serous epithelial ovarian cancer patients

Author

Tassi, Renata, Todeschini, Paola, Siegel, Eric, Calza, Stefano, Cappella, Paolo, Ardighieri, Laura, Cadei, Moris, Bugatti, Mattia, Romani, Chiara, Bandiera, Elisabetta, Zanotti, Laura, Tassone, Laura, Guarino, Donatella, Santonocito, Concetta, Capoluongo, Ettore, Beltrame, Luca, Erba, Eugenio, Marchini, Sergio, D’Incalci, Maurizio, Donzelli, Carla, Santin, Alessandro, Pecorelli, Sergio, Sartori, Enrico, Bignotti, Eliana, Odicino, Franco, and Ravaggi, Antonella more...

Subjects
3. Good health
Abstract

Detailed protocols for the establishment and the characterization of the EOC cell lines. Table S1: Clinical features of patients and tumor characteristics of samples used to derive cell lines; Table S2: Antibodies features and detailed staining protocols; description of short tandem repeat (STR) DNA profiling; description of BRCA1/2 sequencing; determination of cell linesâ growth rate. (DOCX 23Â kb) more...

15. Additional file 2: of FOXM1 expression is significantly associated with chemotherapy resistance and adverse prognosis in non-serous epithelial ovarian cancer patients

Author

Tassi, Renata, Todeschini, Paola, Siegel, Eric, Calza, Stefano, Cappella, Paolo, Ardighieri, Laura, Cadei, Moris, Bugatti, Mattia, Romani, Chiara, Bandiera, Elisabetta, Zanotti, Laura, Tassone, Laura, Guarino, Donatella, Santonocito, Concetta, Capoluongo, Ettore, Beltrame, Luca, Erba, Eugenio, Marchini, Sergio, D’Incalci, Maurizio, Donzelli, Carla, Santin, Alessandro, Pecorelli, Sergio, Sartori, Enrico, Bignotti, Eliana, Odicino, Franco, and Ravaggi, Antonella more...

Subjects
3. Good health
Abstract

Description of microarray analysis on EOC tissue specimens and cell lines. Table S3: Genes related to tumor invasion-metastasis used for the Gene-Sets Enrichment Analysis (GSEA). (DOCX 18Â kb)

16. Additional file 1: of FOXM1 expression is significantly associated with chemotherapy resistance and adverse prognosis in non-serous epithelial ovarian cancer patients

Author

Tassi, Renata, Todeschini, Paola, Siegel, Eric, Calza, Stefano, Cappella, Paolo, Ardighieri, Laura, Cadei, Moris, Bugatti, Mattia, Romani, Chiara, Bandiera, Elisabetta, Zanotti, Laura, Tassone, Laura, Guarino, Donatella, Santonocito, Concetta, Capoluongo, Ettore, Beltrame, Luca, Erba, Eugenio, Marchini, Sergio, D’Incalci, Maurizio, Donzelli, Carla, Santin, Alessandro, Pecorelli, Sergio, Sartori, Enrico, Bignotti, Eliana, Odicino, Franco, and Ravaggi, Antonella more...

Subjects
3. Good health
Abstract

Detailed protocols for the establishment and the characterization of the EOC cell lines. Table S1: Clinical features of patients and tumor characteristics of samples used to derive cell lines; Table S2: Antibodies features and detailed staining protocols; description of short tandem repeat (STR) DNA profiling; description of BRCA1/2 sequencing; determination of cell linesâ growth rate. (DOCX 23Â kb) more...

17. Additional file 6: Figure S3. of FOXM1 expression is significantly associated with chemotherapy resistance and adverse prognosis in non-serous epithelial ovarian cancer patients

Author

Tassi, Renata, Todeschini, Paola, Siegel, Eric, Calza, Stefano, Cappella, Paolo, Ardighieri, Laura, Cadei, Moris, Bugatti, Mattia, Romani, Chiara, Bandiera, Elisabetta, Zanotti, Laura, Tassone, Laura, Guarino, Donatella, Santonocito, Concetta, Capoluongo, Ettore, Beltrame, Luca, Erba, Eugenio, Marchini, Sergio, D’Incalci, Maurizio, Donzelli, Carla, Santin, Alessandro, Pecorelli, Sergio, Sartori, Enrico, Bignotti, Eliana, Odicino, Franco, and Ravaggi, Antonella more...

Subjects
endocrine system diseases, female genital diseases and pregnancy complications, 3. Good health
Abstract

Flow cytometric and BrdU analyses of DNA content in siFOXM1 EOC cells. (DOCX 1136Â kb)

18. Additional file 6: Figure S3. of FOXM1 expression is significantly associated with chemotherapy resistance and adverse prognosis in non-serous epithelial ovarian cancer patients

Author

Tassi, Renata, Todeschini, Paola, Siegel, Eric, Calza, Stefano, Cappella, Paolo, Ardighieri, Laura, Cadei, Moris, Bugatti, Mattia, Romani, Chiara, Bandiera, Elisabetta, Zanotti, Laura, Tassone, Laura, Guarino, Donatella, Santonocito, Concetta, Capoluongo, Ettore, Beltrame, Luca, Erba, Eugenio, Marchini, Sergio, D’Incalci, Maurizio, Donzelli, Carla, Santin, Alessandro, Pecorelli, Sergio, Sartori, Enrico, Bignotti, Eliana, Odicino, Franco, and Ravaggi, Antonella more...

Subjects
endocrine system diseases, female genital diseases and pregnancy complications, 3. Good health
Abstract

Flow cytometric and BrdU analyses of DNA content in siFOXM1 EOC cells. (DOCX 1100Â kb)

19. Additional file 1: of FOXM1 expression is significantly associated with chemotherapy resistance and adverse prognosis in non-serous epithelial ovarian cancer patients

Author

Tassi, Renata, Todeschini, Paola, Siegel, Eric, Calza, Stefano, Cappella, Paolo, Ardighieri, Laura, Cadei, Moris, Bugatti, Mattia, Romani, Chiara, Bandiera, Elisabetta, Zanotti, Laura, Tassone, Laura, Guarino, Donatella, Santonocito, Concetta, Capoluongo, Ettore, Beltrame, Luca, Erba, Eugenio, Marchini, Sergio, D’Incalci, Maurizio, Donzelli, Carla, Santin, Alessandro, Pecorelli, Sergio, Sartori, Enrico, Bignotti, Eliana, Odicino, Franco, and Ravaggi, Antonella more...

Subjects
3. Good health
Abstract

Detailed protocols for the establishment and the characterization of the EOC cell lines. Table S1: Clinical features of patients and tumor characteristics of samples used to derive cell lines; Table S2: Antibodies features and detailed staining protocols; description of short tandem repeat (STR) DNA profiling; description of BRCA1/2 sequencing; determination of cell linesâ growth rate. (DOCX 23Â kb) more...

20. Additional file 2: of FOXM1 expression is significantly associated with chemotherapy resistance and adverse prognosis in non-serous epithelial ovarian cancer patients

Author

Tassi, Renata, Todeschini, Paola, Siegel, Eric, Calza, Stefano, Cappella, Paolo, Ardighieri, Laura, Cadei, Moris, Bugatti, Mattia, Romani, Chiara, Bandiera, Elisabetta, Zanotti, Laura, Tassone, Laura, Guarino, Donatella, Santonocito, Concetta, Capoluongo, Ettore, Beltrame, Luca, Erba, Eugenio, Marchini, Sergio, D’Incalci, Maurizio, Donzelli, Carla, Santin, Alessandro, Pecorelli, Sergio, Sartori, Enrico, Bignotti, Eliana, Odicino, Franco, and Ravaggi, Antonella more...

Subjects
3. Good health
Abstract

Description of microarray analysis on EOC tissue specimens and cell lines. Table S3: Genes related to tumor invasion-metastasis used for the Gene-Sets Enrichment Analysis (GSEA). (DOCX 18Â kb)